Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000436.1

Orthogroup ID

OG0008644

Physical Location & Seq

Genomic Coordinates Reverse (-)

9409 .. 13023

Gene Structure 3615 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000436.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

atggcgggaggggttatcctatcgtcccaaaccacaacccaaaccttactcttttccattcccaaaatacccttcccactatggaagctccccttcatttcccgccaattttcctgcaagtgctctcaaaccacccaagtcgccgcagtggacttggccaagtacaaagaagctttctctagacggatggacatggccggcctcaaaccccaccaccgaatcgctattggagtttctggaggtccggatagtatggccttgtgtgctttaactgcgtactggaaaggacaagggtatgatggtaaatgtgatgagggattcattgatggggttttggctataattgtggatcatgggctgcgtgaagagagcgcggaagaggccagcattgtttccaatcgtgtcgcgaaaatgggaatcagaagtgatgttgcctgttgtgattgggaggatggtaagccgaaacaaggtcatgtgcaagaagcagctcgcgaaatgaggtaccagatatttcagaacgtttgtatcaagaaccagattggtgtgttacttacggcacatcatgctgatgaccaggctgagttatttgttatcagactatctcgcaatagcggtattcttggacttgctggtatgcctttcacatctcaaattttctcctcgcacacccattctcatactgaagtttctagaaactatggtattcttcttgtgagaccactcctggatttttcaaaagaagatatgtacaaggctgagttatttgttatcagactatctcgcaatagcggtattcttggacttgctggtatgcctttcacatctcaaattttctcctcgcacacccattctcatactgaagtttctagaaactatggtattcttcttgtgagaccactcctggatttttcaaaagaagatatgtacaagatatgccaagggagtgatcaggaatgggtggaagacccaacaaatcaaagcctgttatatgctcgtaatagaattcgaatgtccttaagggacgcatcatgtgcattcaaaaatgagctacaagcagttattactgcttgtcggaaaacacgcgtatatattgatcatgtttgccgtgctttgatgtctaaagcagtgaccgtttctcatctaggatatgcggttattgatttagagattcttaatcaatcaaaagtggaggacatatgcctgtcaaagttcatttccttagttttgcagttcatctcacaaaggcacagaccacttagaggtaatacttcaaaattgcttgttggttacctgcgtagtttcccatgcaagacatctgttactgcagctggctgcttcctttctccagctcctgggtctagaggcacaaaaaccctggtgtgctgttctgttgattctcctctgccttcaaatatagggttatcccatcaacactttcaagcagtacaagaacactctactccagatgagatagagcaaattatcgctgatggcaaatcctatgcagatcacttggttccaaaagcatcagatgtgcctttcttagaagtaacatctaaatcagttttaactgaagcgaggaggcttggtatgattagtgaggcaacccatacaaatattctttcattgcagaaggaagagattgagcatttcaagtccaagagtgaagtaaaagctgactacaagtcaaagcatggagtcaaatctattagtacatcacccagtgaaccacttccccccgggcaaatatgttgcttcatgaaccgattttttatcacatggaaactgagtgaagtttctgaggaagctttggagggggaaagtcggtgtggtggcaaatcttgtattggccatgacacagtgcttgaggtgcggaacatgagtgaacaggattggctgtatctttccgacttgtcaaagtctcatactttggggaaccttcaagaacaaagcaactctttggataggaaggtagaacaaagaaaagaggagacagacacatctctagactatgcaaggatttcagcacaaagagctcttcattccctgaaatctattcctgctgctgcaagaaggggcctgcctgttctggtcaataatcaaggacttctgctaagcataccgagcatcgacttccaaggctgctcatgcttgatggtctctgcgacattcaagccaaaagtaccacttgggggagaccatagttcgttcatctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ATP_bind_3

Protein Analysis

738

Amino Acids

81.73

Weight (kDa)

8.11

Isoelectric Point (pI)

46.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24560 AT3G24560 AT3G24560
fragaria_vesca	FvH4_1g04570 FvH4_1g04570 FvH4_1g04570 FvH4_1g04570 FvH4_1g04570 FvH4_1g04570
malus_domestica	MD15G1183800.v1.1
prunus_persica	Prupe.7G232400_v2.0.a1
pyrus_communis	pycom15g16540
rosa_chinensis	RchiOBHm_Chr2g0090271
rosa_laevigata	RLG00000016093
rosa_multiflora	Rmu_sc0000436.1_g000002
rosa_roxburghii	Rroxscaffold_2G00151330
rosa_rugosa	Rorug02G0006000 Rorug02G0006100
rosa_samantha	Rh2AG052000 Rh2BG050600 Rh2CG052800 Rh2DG051900
rosa_wichuraiana	Rw2G004490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1299
Acc65I	GGTACC	1 cut(s)	501
AccB1I	GGYRCC	1 cut(s)	501
AccB7I	CCANNNNNTGG	1 cut(s)	1352
AccII	CGCG	4 cut(s)	374, 407, 492, 1083
AccIII	TCCGGA	1 cut(s)	244
AciI	CCGC	8 cut(s)	5, 103, 144, 374, 612, 789, 1151, 1873
AclI	AACGTT	1 cut(s)	519
AclWI	GGATC	1 cut(s)	357
AcoI	YGGCCR	3 cut(s)	156, 195, 1849
AcsI	RAATTY	3 cut(s)	651, 828, 1002
AcuI	CTGAAG	3 cut(s)	702, 879, 1593
AdeI	CACNNNGTG	1 cut(s)	1724
AfaI	GTAC	8 cut(s)	164, 278, 503, 749, 926, 1446, 1714, 2184
AfiI	CCNNNNNNNGG	4 cut(s)	467, 1259, 1352, 2192
AflII	CTTAAG	1 cut(s)	1015
AflIII	ACRYGT	1 cut(s)	1081
AgsI	TTSAA	9 cut(s)	735, 912, 1039, 1272, 1410, 1439, 1654, 1943, 2173
AhdI	GACNNNNNGTC	1 cut(s)	1684
AjnI	CCWGG	5 cut(s)	573, 723, 900, 1351, 1374
AjuI	GAANNNNNNNTTGG	2 cut(s)	56, 88
AluBI	AGCT	9 cut(s)	88, 173, 488, 1048, 1328, 1349, 1676, 1808, 2036
AluI	AGCT	9 cut(s)	88, 173, 488, 1048, 1328, 1349, 1676, 1808, 2036
Alw21I	GWGCWC	2 cut(s)	125, 2038
Alw26I	GTCTC	6 cut(s)	709, 886, 1926, 1985, 2164, 2190
AlwI	GGATC	1 cut(s)	357
AlwNI	CAGNNNCTG	1 cut(s)	1352
Ama87I	CYCGRG	1 cut(s)	1739
Aor13HI	TCCGGA	1 cut(s)	244
AoxI	GGCC	7 cut(s)	156, 195, 199, 255, 381, 1849, 2077
ApeKI	GCWGC	7 cut(s)	358, 485, 1325, 1332, 2063, 2066, 2142
ApoI	RAATTY	3 cut(s)	651, 828, 1002
Asp700I	GAANNNNTTC	1 cut(s)	1731
Asp718I	GGTACC	1 cut(s)	501
AspLEI	GCGC	1 cut(s)	374
AspS9I	GGNCC	2 cut(s)	242, 2077
AsuC2I	CCSGG	2 cut(s)	1740, 1741
AsuHPI	GGTGA	1 cut(s)	1710
AsuII	TTCGAA	1 cut(s)	1006
AvaI	CYCGRG	1 cut(s)	1739
AvaII	GGWCC	1 cut(s)	242
BaeI	ACNNNNGTAYC	2 cut(s)	508, 541
BalI	TGGCCA	2 cut(s)	158, 1851
BanI	GGYRCC	1 cut(s)	501
BanII	GRGCYC	1 cut(s)	2038
BbsI	GAAGAC	1 cut(s)	969
Bbv12I	GWGCWC	2 cut(s)	125, 2038
BbvI	GCAGC	7 cut(s)	345, 497, 1319, 1337, 2050, 2053, 2129
BccI	CCATC	7 cut(s)	181, 293, 320, 446, 1434, 1484, 2149
BceAI	ACGGC	2 cut(s)	570, 1089
BciT130I	CCWGG	5 cut(s)	575, 725, 902, 1353, 1376
BclI	TGATCA	2 cut(s)	946, 1093
BcnI	CCSGG	2 cut(s)	1740, 1741
BcoDI	GTCTC	6 cut(s)	709, 886, 1926, 1985, 2164, 2190
BfaI	CTAG	7 cut(s)	180, 690, 867, 1142, 1359, 2006, 2215
BfmI	CTRYAG	1 cut(s)	1323
BfrI	CTTAAG	1 cut(s)	1015
BfuAI	ACCTGC	1 cut(s)	1299
BisI	GCNGC	8 cut(s)	144, 359, 486, 1326, 1333, 2064, 2067, 2143
BlpI	GCTNAGC	1 cut(s)	2114
BlsI	GCNGC	8 cut(s)	145, 360, 487, 1327, 1334, 2065, 2068, 2144
Bme1390I	CCNGG	7 cut(s)	575, 725, 902, 1353, 1376, 1740, 1741
Bme18I	GGWCC	1 cut(s)	242
BmeRI	GACNNNNNGTC	1 cut(s)	1684
BmeT110I	CYCGRG	1 cut(s)	1739
BmgT120I	GGNCC	2 cut(s)	242, 2077
BmiI	GGNNCC	4 cut(s)	503, 1518, 1937, 2078
BmrFI	CCNGG	7 cut(s)	575, 725, 902, 1353, 1376, 1740, 1741
BmrI	ACTGGG	1 cut(s)	1716
BmsI	GCATC	3 cut(s)	1034, 1535, 2136
BmuI	ACTGGG	1 cut(s)	1716
BpiI	GAAGAC	1 cut(s)	969
BpmI	CTGGAG	3 cut(s)	258, 1329, 1446
Bpu1102I	GCTNAGC	1 cut(s)	2114
Bpu14I	TTCGAA	1 cut(s)	1006
BpuEI	CTTGAG	1 cut(s)	1886
BpuMI	CCSGG	2 cut(s)	1740, 1741
BsaI	GGTCTC	4 cut(s)	709, 886, 2164, 2190
BsaJI	CCNNGG	6 cut(s)	937, 1352, 1374, 1738, 1739, 2137
BsaWI	WCCGGW	1 cut(s)	244
BsaXI	ACNNNNNCTCC	2 cut(s)	1573, 1603
Bsc4I	CCNNNNNNNGG	4 cut(s)	467, 1259, 1352, 2192
Bse118I	RCCGGY	1 cut(s)	197
Bse1I	ACTGG	2 cut(s)	284, 1722
Bse3DI	GCAATG	1 cut(s)	1625
BseAI	TCCGGA	1 cut(s)	244
BseBI	CCWGG	5 cut(s)	575, 725, 902, 1353, 1376
BseDI	CCNNGG	6 cut(s)	937, 1352, 1374, 1738, 1739, 2137
BseGI	GGATG	2 cut(s)	192, 457
BseLI	CCNNNNNNNGG	4 cut(s)	467, 1259, 1352, 2192
BseMI	GCAATG	1 cut(s)	1625
BseMII	CTCAG	4 cut(s)	570, 747, 1778, 1791
BseNI	ACTGG	2 cut(s)	284, 1722
BseRI	GAGGAG	5 cut(s)	649, 826, 1389, 1594, 2003
BseXI	GCAGC	7 cut(s)	345, 497, 1319, 1337, 2050, 2053, 2129
Bsh1236I	CGCG	4 cut(s)	374, 407, 492, 1083
BshFI	GGCC	7 cut(s)	158, 197, 201, 257, 383, 1851, 2079
BshNI	GGYRCC	1 cut(s)	501
BsiHKAI	GWGCWC	2 cut(s)	125, 2038
BsiHKCI	CYCGRG	1 cut(s)	1739
BsiSI	CCGG	3 cut(s)	198, 245, 1740
BslFI	GGGAC	2 cut(s)	10, 1034
BslI	CCNNNNNNNGG	4 cut(s)	467, 1259, 1352, 2192
BsmAI	GTCTC	6 cut(s)	709, 886, 1926, 1985, 2164, 2190
BsmFI	GGGAC	2 cut(s)	10, 1034
BsmI	GAATGC	1 cut(s)	1034
BsnI	GGCC	7 cut(s)	158, 197, 201, 257, 383, 1851, 2079
Bso31I	GGTCTC	4 cut(s)	709, 886, 2164, 2190
BsoBI	CYCGRG	1 cut(s)	1739
Bsp119I	TTCGAA	1 cut(s)	1006
Bsp1286I	GDGCHC	2 cut(s)	125, 2038
Bsp13I	TCCGGA	1 cut(s)	244
Bsp1407I	TGTACA	2 cut(s)	747, 924
Bsp143I	GATC	4 cut(s)	349, 946, 1093, 1507
Bsp1720I	GCTNAGC	1 cut(s)	2114
Bsp68I	TCGCGA	2 cut(s)	407, 492
BspACI	CCGC	8 cut(s)	5, 103, 144, 374, 612, 789, 1151, 1873
BspANI	GGCC	7 cut(s)	158, 197, 201, 257, 383, 1851, 2079
BspCNI	CTCAG	4 cut(s)	571, 748, 1779, 1792
BspEI	TCCGGA	1 cut(s)	244
BspFNI	CGCG	4 cut(s)	374, 407, 492, 1083
BspHI	TCATGA	1 cut(s)	1758
BspLI	GGNNCC	4 cut(s)	503, 1518, 1937, 2078
BspMAI	CTGCAG	1 cut(s)	1327
BspMI	ACCTGC	1 cut(s)	1299
BspPI	GGATC	1 cut(s)	357
BspQI	GCTCTTC	1 cut(s)	2043
BspT104I	TTCGAA	1 cut(s)	1006
BspT107I	GGYRCC	1 cut(s)	501
BspTI	CTTAAG	1 cut(s)	1015
BspTNI	GGTCTC	4 cut(s)	709, 886, 2164, 2190
BsrDI	GCAATG	1 cut(s)	1625
BsrFI	RCCGGY	1 cut(s)	197
BsrGI	TGTACA	2 cut(s)	747, 924
BsrI	ACTGG	2 cut(s)	284, 1722
BssAI	RCCGGY	1 cut(s)	197
BssECI	CCNNGG	6 cut(s)	937, 1352, 1374, 1738, 1739, 2137
BssMI	GATC	4 cut(s)	349, 946, 1093, 1507
BssT1I	CCWWGG	2 cut(s)	937, 2137
Bst2UI	CCWGG	5 cut(s)	575, 725, 902, 1353, 1376
Bst4CI	ACNGT	2 cut(s)	1132, 1861
Bst6I	CTCTTC	4 cut(s)	360, 372, 1632, 2043
BstAFI	CTTAAG	1 cut(s)	1015
BstAPI	GCANNNNNTGC	2 cut(s)	563, 1031
BstAUI	TGTACA	2 cut(s)	747, 924
BstBI	TTCGAA	1 cut(s)	1006
BstC8I	GCNNGC	5 cut(s)	199, 385, 490, 1330, 2081
BstDEI	CTNAG	8 cut(s)	579, 756, 1219, 1256, 1543, 1787, 1800, 2114
BstEII	GGTNACC	1 cut(s)	1286
BstF5I	GGATG	2 cut(s)	192, 457
BstFNI	CGCG	4 cut(s)	374, 407, 492, 1083
BstHHI	GCGC	1 cut(s)	374
BstKTI	GATC	4 cut(s)	352, 949, 1096, 1510
BstMAI	GTCTC	6 cut(s)	709, 886, 1926, 1985, 2164, 2190
BstMBI	GATC	4 cut(s)	349, 946, 1093, 1507
BstMWI	GCNNNNNNNGC	9 cut(s)	263, 272, 380, 563, 1031, 1870, 2033, 2124, 2148
BstNI	CCWGG	5 cut(s)	575, 725, 902, 1353, 1376
BstPI	GGTNACC	1 cut(s)	1286
BstSCI	CCNGG	7 cut(s)	573, 723, 900, 1351, 1374, 1738, 1739
BstSFI	CTRYAG	1 cut(s)	1323
BstUI	CGCG	4 cut(s)	374, 407, 492, 1083
BstV1I	GCAGC	7 cut(s)	345, 497, 1319, 1337, 2050, 2053, 2129
BstV2I	GAAGAC	1 cut(s)	969
BsuRI	GGCC	7 cut(s)	158, 197, 201, 257, 383, 1851, 2079
BtsCI	GGATG	2 cut(s)	192, 457
BtsI	GCAGTG	2 cut(s)	153, 1131
BtsIMutI	CAGTG	4 cut(s)	153, 1131, 1729, 1866
BtuMI	TCGCGA	2 cut(s)	407, 492
BveI	ACCTGC	1 cut(s)	1299
Cac8I	GCNNGC	5 cut(s)	199, 385, 490, 1330, 2081
CaiI	CAGNNNCTG	1 cut(s)	1352
CciI	TCATGA	1 cut(s)	1758
CfoI	GCGC	1 cut(s)	374
Cfr10I	RCCGGY	1 cut(s)	197
Cfr13I	GGNCC	2 cut(s)	242, 2077
Cfr9I	CCCGGG	1 cut(s)	1739
CseI	GACGC	1 cut(s)	1031
Csp6I	GTAC	8 cut(s)	163, 277, 502, 748, 925, 1445, 1713, 2183
CviQI	GTAC	8 cut(s)	163, 277, 502, 748, 925, 1445, 1713, 2183
DdeI	CTNAG	8 cut(s)	579, 756, 1219, 1256, 1543, 1787, 1800, 2114
DpnI	GATC	4 cut(s)	351, 948, 1095, 1509
DpnII	GATC	4 cut(s)	349, 946, 1093, 1507
DraIII	CACNNNGTG	1 cut(s)	1724
DriI	GACNNNNNGTC	1 cut(s)	1684
EaeI	YGGCCR	3 cut(s)	156, 195, 1849
Eam1104I	CTCTTC	4 cut(s)	360, 372, 1632, 2043
Eam1105I	GACNNNNNGTC	1 cut(s)	1684
EarI	CTCTTC	4 cut(s)	360, 372, 1632, 2043
Ecl136II	GAGCTC	1 cut(s)	2036
Eco130I	CCWWGG	2 cut(s)	937, 2137
Eco24I	GRGCYC	1 cut(s)	2038
Eco31I	GGTCTC	4 cut(s)	709, 886, 2164, 2190
Eco47I	GGWCC	1 cut(s)	242
Eco53kI	GAGCTC	1 cut(s)	2036
Eco57I	CTGAAG	3 cut(s)	702, 879, 1593
Eco88I	CYCGRG	1 cut(s)	1739
Eco91I	GGTNACC	1 cut(s)	1286
EcoICRI	GAGCTC	1 cut(s)	2036
EcoO109I	RGGNCCY	1 cut(s)	2077
EcoO65I	GGTNACC	1 cut(s)	1286
EcoRI	GAATTC	1 cut(s)	1002
EcoRII	CCWGG	5 cut(s)	573, 723, 900, 1351, 1374
EcoT14I	CCWWGG	2 cut(s)	937, 2137
EcoT38I	GRGCYC	1 cut(s)	2038
ErhI	CCWWGG	2 cut(s)	937, 2137
FalI	AAGNNNNNCTT	6 cut(s)	77, 109, 1942, 1974, 2172, 2204
FaqI	GGGAC	2 cut(s)	10, 1034
FauI	CCCGC	1 cut(s)	110
FauNDI	CATATG	1 cut(s)	1196
FbaI	TGATCA	2 cut(s)	946, 1093
Fnu4HI	GCNGC	8 cut(s)	144, 359, 486, 1326, 1333, 2064, 2067, 2143
FokI	GGATG	2 cut(s)	199, 464
FriOI	GRGCYC	1 cut(s)	2038
FseI	GGCCGGCC	1 cut(s)	201
Fsp4HI	GCNGC	8 cut(s)	144, 359, 486, 1326, 1333, 2064, 2067, 2143
FspBI	CTAG	7 cut(s)	180, 690, 867, 1142, 1359, 2006, 2215
GlaI	GCGC	1 cut(s)	373
GluI	GCNGC	8 cut(s)	144, 359, 486, 1326, 1333, 2064, 2067, 2143
GsuI	CTGGAG	3 cut(s)	258, 1329, 1446
HaeIII	GGCC	7 cut(s)	158, 197, 201, 257, 383, 1851, 2079
HapII	CCGG	3 cut(s)	198, 245, 1740
HgaI	GACGC	1 cut(s)	1031
HhaI	GCGC	1 cut(s)	374
Hin6I	GCGC	1 cut(s)	372
HinP1I	GCGC	1 cut(s)	372
HindIII	AAGCTT	2 cut(s)	171, 1806
HinfI	GANTC	6 cut(s)	219, 318, 417, 1168, 1394, 1698
HpaII	CCGG	3 cut(s)	198, 245, 1740
HphI	GGTGA	1 cut(s)	1710
Hpy166II	GTNNAC	3 cut(s)	151, 1727, 1886
Hpy188I	TCNGA	8 cut(s)	422, 516, 596, 773, 1074, 1531, 1801, 1909
Hpy8I	GTNNAC	3 cut(s)	151, 1727, 1886
HpyAV	CCTTC	7 cut(s)	82, 103, 1416, 1627, 1949, 1963, 2067
HpyCH4III	ACNGT	2 cut(s)	1132, 1861
HpyCH4IV	ACGT	1 cut(s)	519
HpyF10VI	GCNNNNNNNGC	9 cut(s)	263, 272, 380, 563, 1031, 1870, 2033, 2124, 2148
HpyF3I	CTNAG	8 cut(s)	579, 756, 1219, 1256, 1543, 1787, 1800, 2114
HpySE526I	ACGT	1 cut(s)	519
HspAI	GCGC	1 cut(s)	372
Kpn2I	TCCGGA	1 cut(s)	244
KpnI	GGTACC	1 cut(s)	505
KroI	GCCGGC	1 cut(s)	197
KroNI	GCCGGC	1 cut(s)	199
Ksp22I	TGATCA	2 cut(s)	946, 1093
Kzo9I	GATC	4 cut(s)	349, 946, 1093, 1507
LguI	GCTCTTC	1 cut(s)	2043
LmnI	GCTCC	2 cut(s)	93, 1354
Lsp1109I	GCAGC	7 cut(s)	345, 497, 1319, 1337, 2050, 2053, 2129
LweI	GCATC	3 cut(s)	1034, 1535, 2136
MaeI	CTAG	7 cut(s)	180, 690, 867, 1142, 1359, 2006, 2215
MaeII	ACGT	1 cut(s)	519
MaeIII	GTNAC	5 cut(s)	546, 1126, 1286, 1318, 1549
MalI	GATC	4 cut(s)	351, 948, 1095, 1509
MboI	GATC	4 cut(s)	349, 946, 1093, 1507
MboII	GAAGA	9 cut(s)	377, 389, 698, 752, 875, 929, 974, 1649, 2030
MhlI	GDGCHC	2 cut(s)	125, 2038
MlsI	TGGCCA	2 cut(s)	158, 1851
MluCI	AATT	7 cut(s)	107, 342, 651, 828, 1002, 1274, 1479
MluI	ACGCGT	1 cut(s)	1081
MluNI	TGGCCA	2 cut(s)	158, 1851
MlyI	GAGTC	1 cut(s)	1707
MmeI	TCCRAC	2 cut(s)	1052, 1932
Mox20I	TGGCCA	2 cut(s)	158, 1851
MroI	TCCGGA	1 cut(s)	244
MroNI	GCCGGC	1 cut(s)	197
MroXI	GAANNNNTTC	1 cut(s)	1731
MscI	TGGCCA	2 cut(s)	158, 1851
MseI	TTAA	4 cut(s)	269, 1016, 1173, 1568
MslI	CAYNNNNRTG	1 cut(s)	567
Msp20I	TGGCCA	2 cut(s)	158, 1851
MspA1I	CMGCKG	1 cut(s)	1328
MspCI	CTTAAG	1 cut(s)	1015
MspI	CCGG	3 cut(s)	198, 245, 1740
MspR9I	CCNGG	7 cut(s)	575, 725, 902, 1353, 1376, 1740, 1741
Mva1269I	GAATGC	1 cut(s)	1034
MvaI	CCWGG	5 cut(s)	575, 725, 902, 1353, 1376
MvnI	CGCG	4 cut(s)	374, 407, 492, 1083
MwoI	GCNNNNNNNGC	9 cut(s)	263, 272, 380, 563, 1031, 1870, 2033, 2124, 2148
NaeI	GCCGGC	1 cut(s)	199
NciI	CCSGG	2 cut(s)	1740, 1741
NdeI	CATATG	1 cut(s)	1196
NdeII	GATC	4 cut(s)	349, 946, 1093, 1507
NgoMIV	GCCGGC	1 cut(s)	197
NlaIV	GGNNCC	4 cut(s)	503, 1518, 1937, 2078
NmuCI	GTSAC	1 cut(s)	1126
NruI	TCGCGA	2 cut(s)	407, 492
NspV	TTCGAA	1 cut(s)	1006
PagI	TCATGA	1 cut(s)	1758
PciSI	GCTCTTC	1 cut(s)	2043
PctI	GAATGC	1 cut(s)	1034
PdiI	GCCGGC	1 cut(s)	199
PdmI	GAANNNNTTC	1 cut(s)	1731
PfeI	GAWTC	5 cut(s)	219, 318, 417, 1168, 1394
PflMI	CCANNNNNTGG	1 cut(s)	1352
PfoI	TCCNGGA	2 cut(s)	723, 900
PkrI	GCNGC	8 cut(s)	145, 360, 487, 1327, 1334, 2065, 2068, 2144
PleI	GAGTC	1 cut(s)	1706
PpsI	GAGTC	1 cut(s)	1706
Psp124BI	GAGCTC	1 cut(s)	2038
Psp1406I	AACGTT	1 cut(s)	519
Psp6I	CCWGG	5 cut(s)	573, 723, 900, 1351, 1374
PspEI	GGTNACC	1 cut(s)	1286
PspGI	CCWGG	5 cut(s)	573, 723, 900, 1351, 1374
PspN4I	GGNNCC	4 cut(s)	503, 1518, 1937, 2078
PspPI	GGNCC	2 cut(s)	242, 2077
PstI	CTGCAG	1 cut(s)	1327
PstNI	CAGNNNCTG	1 cut(s)	1352
PvuII	CAGCTG	1 cut(s)	1328
RigI	GGCCGGCC	1 cut(s)	201
RruI	TCGCGA	2 cut(s)	407, 492
RsaI	GTAC	8 cut(s)	164, 278, 503, 749, 926, 1446, 1714, 2184
RsaNI	GTAC	8 cut(s)	163, 277, 502, 748, 925, 1445, 1713, 2183
RseI	CAYNNNNRTG	1 cut(s)	567
SacI	GAGCTC	1 cut(s)	2038
SapI	GCTCTTC	1 cut(s)	2043
SaqAI	TTAA	4 cut(s)	269, 1016, 1173, 1568
SatI	GCNGC	8 cut(s)	144, 359, 486, 1326, 1333, 2064, 2067, 2143
Sau3AI	GATC	4 cut(s)	349, 946, 1093, 1507
Sau96I	GGNCC	2 cut(s)	242, 2077
SchI	GAGTC	1 cut(s)	1707
ScrFI	CCNGG	7 cut(s)	575, 725, 902, 1353, 1376, 1740, 1741
SduI	GDGCHC	2 cut(s)	125, 2038
SfaNI	GCATC	3 cut(s)	1034, 1535, 2136
SfcI	CTRYAG	1 cut(s)	1323
SfuI	TTCGAA	1 cut(s)	1006
SinI	GGWCC	1 cut(s)	242
SmaI	CCCGGG	1 cut(s)	1741
SmiMI	CAYNNNNRTG	1 cut(s)	567
SmlI	CTYRAG	2 cut(s)	1015, 1865
SmoI	CTYRAG	2 cut(s)	1015, 1865
Sse9I	AATT	7 cut(s)	107, 342, 651, 828, 1002, 1274, 1479
SsiI	CCGC	8 cut(s)	5, 103, 144, 374, 612, 789, 1151, 1873
SspI	AATATT	1 cut(s)	1618
SspMI	CTAG	7 cut(s)	180, 690, 867, 1142, 1359, 2006, 2215
SstI	GAGCTC	1 cut(s)	2038
StyD4I	CCNGG	7 cut(s)	573, 723, 900, 1351, 1374, 1738, 1739
StyI	CCWWGG	2 cut(s)	937, 2137
TaaI	ACNGT	2 cut(s)	1132, 1861
TaiI	ACGT	1 cut(s)	522
TaqI	TCGA	2 cut(s)	1006, 2130
TasI	AATT	7 cut(s)	107, 342, 651, 828, 1002, 1274, 1479
TatI	WGTACW	5 cut(s)	162, 747, 924, 1444, 1712
TauI	GCSGC	1 cut(s)	146
TfiI	GAWTC	5 cut(s)	219, 318, 417, 1168, 1394
Tru1I	TTAA	4 cut(s)	269, 1016, 1173, 1568
Tru9I	TTAA	4 cut(s)	269, 1016, 1173, 1568
TscAI	CASTG	4 cut(s)	153, 1131, 1729, 1866
TseFI	GTSAC	1 cut(s)	1126
TseI	GCWGC	7 cut(s)	358, 485, 1325, 1332, 2063, 2066, 2142
Tsp45I	GTSAC	1 cut(s)	1126
TspDTI	ATGAA	9 cut(s)	85, 310, 1201, 1222, 1614, 1747, 1775, 2030, 2200
TspGWI	ACGGA	1 cut(s)	199
TspMI	CCCGGG	1 cut(s)	1739
TspRI	CASTG	4 cut(s)	153, 1131, 1729, 1866
Van91I	CCANNNNNTGG	1 cut(s)	1352
Vha464I	CTTAAG	1 cut(s)	1015
VpaK11BI	GGWCC	1 cut(s)	242
XapI	RAATTY	3 cut(s)	651, 828, 1002
XbaI	TCTAGA	5 cut(s)	179, 689, 866, 1358, 2005
XmaI	CCCGGG	1 cut(s)	1739
XmnI	GAANNNNTTC	1 cut(s)	1731
XspI	CTAG	7 cut(s)	180, 690, 867, 1142, 1359, 2006, 2215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.