RNA polymerase II transcription regulator recruiting activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g08370 FvH4_1g08370 |
| rosa_chinensis | RchiOBHm_Chr2g0094411 RchiOBHm_Chr2g0094451 |
| rosa_laevigata | RLG00000016493 |
| rosa_multiflora | Rmu_sc0003819.1_g000002 Rmu_sc0009959.1_g000001 |
| rosa_rugosa | Rorug02G0044100 |
| rosa_samantha | Rh2BG092300 Rh2CG094800 Rh2DG090900 Rh2DG091200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 523 |
| AcsI | RAATTY | 1 cut(s) | 289 |
| AfaI | GTAC | 2 cut(s) | 326, 370 |
| AgsI | TTSAA | 2 cut(s) | 320, 494 |
| AjnI | CCWGG | 2 cut(s) | 47, 187 |
| AluBI | AGCT | 4 cut(s) | 131, 250, 490, 518 |
| AluI | AGCT | 4 cut(s) | 131, 250, 490, 518 |
| Alw21I | GWGCWC | 1 cut(s) | 460 |
| Alw26I | GTCTC | 1 cut(s) | 108 |
| AoxI | GGCC | 2 cut(s) | 45, 185 |
| ApoI | RAATTY | 1 cut(s) | 289 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 208 |
| AspS9I | GGNCC | 3 cut(s) | 45, 98, 340 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 440 |
| AvaII | GGWCC | 2 cut(s) | 98, 340 |
| BbsI | GAAGAC | 1 cut(s) | 231 |
| Bbv12I | GWGCWC | 1 cut(s) | 460 |
| BbvCI | CCTCAGC | 1 cut(s) | 57 |
| BccI | CCATC | 2 cut(s) | 162, 419 |
| BciT130I | CCWGG | 2 cut(s) | 49, 189 |
| BclI | TGATCA | 1 cut(s) | 334 |
| BcoDI | GTCTC | 1 cut(s) | 108 |
| Bme1390I | CCNGG | 2 cut(s) | 49, 189 |
| Bme18I | GGWCC | 2 cut(s) | 98, 340 |
| BmgT120I | GGNCC | 3 cut(s) | 45, 98, 340 |
| BmiI | GGNNCC | 1 cut(s) | 46 |
| BmrFI | CCNGG | 2 cut(s) | 49, 189 |
| BmsI | GCATC | 2 cut(s) | 58, 134 |
| BoxI | GACNNNNGTC | 1 cut(s) | 120 |
| BpiI | GAAGAC | 1 cut(s) | 231 |
| Bpu10I | CCTNAGC | 1 cut(s) | 57 |
| BseBI | CCWGG | 2 cut(s) | 49, 189 |
| BseGI | GGATG | 1 cut(s) | 427 |
| BseMII | CTCAG | 3 cut(s) | 48, 173, 250 |
| BseYI | CCCAGC | 1 cut(s) | 131 |
| BshFI | GGCC | 2 cut(s) | 47, 187 |
| BsiHKAI | GWGCWC | 1 cut(s) | 460 |
| BsmAI | GTCTC | 1 cut(s) | 108 |
| BsnI | GGCC | 2 cut(s) | 47, 187 |
| Bsp1286I | GDGCHC | 1 cut(s) | 460 |
| Bsp143I | GATC | 1 cut(s) | 334 |
| BspANI | GGCC | 2 cut(s) | 47, 187 |
| BspCNI | CTCAG | 3 cut(s) | 49, 174, 249 |
| BspHI | TCATGA | 1 cut(s) | 484 |
| BspLI | GGNNCC | 1 cut(s) | 46 |
| BssMI | GATC | 1 cut(s) | 334 |
| Bst2UI | CCWGG | 2 cut(s) | 49, 189 |
| Bst4CI | ACNGT | 2 cut(s) | 15, 32 |
| BstDEI | CTNAG | 3 cut(s) | 57, 182, 236 |
| BstF5I | GGATG | 1 cut(s) | 427 |
| BstKTI | GATC | 1 cut(s) | 337 |
| BstMAI | GTCTC | 1 cut(s) | 108 |
| BstMBI | GATC | 1 cut(s) | 334 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 53 |
| BstNI | CCWGG | 2 cut(s) | 49, 189 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 120 |
| BstSCI | CCNGG | 2 cut(s) | 47, 187 |
| BstV2I | GAAGAC | 1 cut(s) | 231 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 108 |
| BsuRI | GGCC | 2 cut(s) | 47, 187 |
| BtgZI | GCGATG | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 427 |
| CciI | TCATGA | 1 cut(s) | 484 |
| Cfr13I | GGNCC | 3 cut(s) | 45, 98, 340 |
| Csp6I | GTAC | 2 cut(s) | 325, 369 |
| CviAII | CATG | 7 cut(s) | 95, 102, 383, 461, 476, 485, 508 |
| CviJI | RGCY | 6 cut(s) | 47, 131, 187, 250, 490, 518 |
| CviKI_1 | RGCY | 6 cut(s) | 47, 131, 187, 250, 490, 518 |
| CviQI | GTAC | 2 cut(s) | 325, 369 |
| DdeI | CTNAG | 3 cut(s) | 57, 182, 236 |
| DpnI | GATC | 1 cut(s) | 336 |
| DpnII | GATC | 1 cut(s) | 334 |
| Eco147I | AGGCCT | 1 cut(s) | 187 |
| Eco47I | GGWCC | 2 cut(s) | 98, 340 |
| EcoO109I | RGGNCCY | 2 cut(s) | 45, 340 |
| EcoRI | GAATTC | 1 cut(s) | 289 |
| EcoRII | CCWGG | 2 cut(s) | 47, 187 |
| FaeI | CATG | 7 cut(s) | 98, 105, 386, 464, 479, 488, 511 |
| FatI | CATG | 7 cut(s) | 94, 101, 382, 460, 475, 484, 507 |
| FbaI | TGATCA | 1 cut(s) | 334 |
| FokI | GGATG | 1 cut(s) | 434 |
| GsaI | CCCAGC | 1 cut(s) | 135 |
| HaeIII | GGCC | 2 cut(s) | 47, 187 |
| Hin1II | CATG | 7 cut(s) | 98, 105, 386, 464, 479, 488, 511 |
| HindIII | AAGCTT | 2 cut(s) | 248, 516 |
| HphI | GGTGA | 2 cut(s) | 16, 440 |
| Hpy188I | TCNGA | 4 cut(s) | 183, 214, 239, 355 |
| Hpy188III | TCNNGA | 3 cut(s) | 278, 338, 485 |
| Hpy99I | CGWCG | 1 cut(s) | 126 |
| HpyCH4III | ACNGT | 2 cut(s) | 15, 32 |
| HpyCH4IV | ACGT | 1 cut(s) | 503 |
| HpyCH4V | TGCA | 5 cut(s) | 105, 159, 391, 398, 436 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 53 |
| HpyF3I | CTNAG | 3 cut(s) | 57, 182, 236 |
| HpySE526I | ACGT | 1 cut(s) | 503 |
| Hsp92II | CATG | 7 cut(s) | 98, 105, 386, 464, 479, 488, 511 |
| Ksp22I | TGATCA | 1 cut(s) | 334 |
| Kzo9I | GATC | 1 cut(s) | 334 |
| LmnI | GCTCC | 1 cut(s) | 128 |
| LpnPI | CCDG | 8 cut(s) | 34, 61, 117, 174, 201, 247, 291, 323 |
| LweI | GCATC | 2 cut(s) | 58, 134 |
| MaeII | ACGT | 1 cut(s) | 503 |
| MaeIII | GTNAC | 2 cut(s) | 20, 471 |
| MalI | GATC | 1 cut(s) | 336 |
| MboI | GATC | 1 cut(s) | 334 |
| MboII | GAAGA | 8 cut(s) | 74, 233, 236, 285, 298, 455, 506, 524 |
| MhlI | GDGCHC | 1 cut(s) | 460 |
| MluCI | AATT | 3 cut(s) | 175, 289, 446 |
| MnlI | CCTC | 6 cut(s) | 52, 177, 194, 239, 368, 412 |
| MroXI | GAANNNNTTC | 1 cut(s) | 208 |
| MseI | TTAA | 3 cut(s) | 36, 137, 195 |
| MslI | CAYNNNNRTG | 1 cut(s) | 106 |
| MspR9I | CCNGG | 2 cut(s) | 49, 189 |
| MvaI | CCWGG | 2 cut(s) | 49, 189 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 53 |
| NdeII | GATC | 1 cut(s) | 334 |
| NlaIII | CATG | 7 cut(s) | 98, 105, 386, 464, 479, 488, 511 |
| NlaIV | GGNNCC | 1 cut(s) | 46 |
| NmuCI | GTSAC | 1 cut(s) | 471 |
| PagI | TCATGA | 1 cut(s) | 484 |
| PceI | AGGCCT | 1 cut(s) | 187 |
| PdmI | GAANNNNTTC | 1 cut(s) | 208 |
| PpuMI | RGGWCCY | 1 cut(s) | 340 |
| PshAI | GACNNNNGTC | 1 cut(s) | 120 |
| PsiI | TTATAA | 1 cut(s) | 523 |
| Psp5II | RGGWCCY | 1 cut(s) | 340 |
| Psp6I | CCWGG | 2 cut(s) | 47, 187 |
| PspFI | CCCAGC | 1 cut(s) | 131 |
| PspGI | CCWGG | 2 cut(s) | 47, 187 |
| PspN4I | GGNNCC | 1 cut(s) | 46 |
| PspPI | GGNCC | 3 cut(s) | 45, 98, 340 |
| PspPPI | RGGWCCY | 1 cut(s) | 340 |
| RsaI | GTAC | 2 cut(s) | 326, 370 |
| RsaNI | GTAC | 2 cut(s) | 325, 369 |
| RseI | CAYNNNNRTG | 1 cut(s) | 106 |
| SaqAI | TTAA | 3 cut(s) | 36, 137, 195 |
| Sau3AI | GATC | 1 cut(s) | 334 |
| Sau96I | GGNCC | 3 cut(s) | 45, 98, 340 |
| ScrFI | CCNGG | 2 cut(s) | 49, 189 |
| SduI | GDGCHC | 1 cut(s) | 460 |
| SfaNI | GCATC | 2 cut(s) | 58, 134 |
| SinI | GGWCC | 2 cut(s) | 98, 340 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 106 |
| Sse9I | AATT | 3 cut(s) | 175, 289, 446 |
| SseBI | AGGCCT | 1 cut(s) | 187 |
| StuI | AGGCCT | 1 cut(s) | 187 |
| StyD4I | CCNGG | 2 cut(s) | 47, 187 |
| TaaI | ACNGT | 2 cut(s) | 15, 32 |
| TaiI | ACGT | 1 cut(s) | 506 |
| TaqI | TCGA | 2 cut(s) | 79, 378 |
| TasI | AATT | 3 cut(s) | 175, 289, 446 |
| TatI | WGTACW | 1 cut(s) | 368 |
| Tru1I | TTAA | 3 cut(s) | 36, 137, 195 |
| Tru9I | TTAA | 3 cut(s) | 36, 137, 195 |
| TseFI | GTSAC | 1 cut(s) | 471 |
| Tsp45I | GTSAC | 1 cut(s) | 471 |
| TspDTI | ATGAA | 2 cut(s) | 234, 496 |
| VpaK11BI | GGWCC | 2 cut(s) | 98, 340 |
| XapI | RAATTY | 1 cut(s) | 289 |
| XmnI | GAANNNNTTC | 1 cut(s) | 208 |