Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g08370 FvH4_1g08370 |
| rosa_chinensis | RchiOBHm_Chr2g0094411 RchiOBHm_Chr2g0094451 |
| rosa_laevigata | RLG00000016493 |
| rosa_multiflora | Rmu_sc0003819.1_g000002 Rmu_sc0009959.1_g000001 |
| rosa_rugosa | Rorug02G0044100 |
| rosa_samantha | Rh2BG092300 Rh2CG094800 Rh2DG090900 Rh2DG091200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 172 |
| AluBI | AGCT | 3 cut(s) | 131, 156, 250 |
| AluI | AGCT | 3 cut(s) | 131, 156, 250 |
| Alw26I | GTCTC | 1 cut(s) | 108 |
| AoxI | GGCC | 1 cut(s) | 185 |
| ApeKI | GCWGC | 1 cut(s) | 156 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 208 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 268 |
| BbsI | GAAGAC | 1 cut(s) | 231 |
| BbvCI | CCTCAGC | 1 cut(s) | 57 |
| BbvI | GCAGC | 1 cut(s) | 143 |
| BccI | CCATC | 2 cut(s) | 162, 287 |
| BcoDI | GTCTC | 1 cut(s) | 108 |
| BfmI | CTRYAG | 1 cut(s) | 157 |
| BisI | GCNGC | 1 cut(s) | 157 |
| BlsI | GCNGC | 1 cut(s) | 158 |
| BpiI | GAAGAC | 1 cut(s) | 231 |
| Bpu10I | CCTNAGC | 1 cut(s) | 57 |
| BpuEI | CTTGAG | 1 cut(s) | 108 |
| BseGI | GGATG | 1 cut(s) | 270 |
| BseMII | CTCAG | 2 cut(s) | 48, 173 |
| BseXI | GCAGC | 1 cut(s) | 143 |
| BseYI | CCCAGC | 1 cut(s) | 131 |
| BshFI | GGCC | 1 cut(s) | 187 |
| BsmAI | GTCTC | 1 cut(s) | 108 |
| BsnI | GGCC | 1 cut(s) | 187 |
| BspACI | CCGC | 1 cut(s) | 172 |
| BspANI | GGCC | 1 cut(s) | 187 |
| BspCNI | CTCAG | 2 cut(s) | 49, 174 |
| BspHI | TCATGA | 1 cut(s) | 282 |
| BspMAI | CTGCAG | 1 cut(s) | 161 |
| BspQI | GCTCTTC | 1 cut(s) | 146 |
| Bst4CI | ACNGT | 1 cut(s) | 32 |
| Bst6I | CTCTTC | 1 cut(s) | 146 |
| BstDEI | CTNAG | 2 cut(s) | 57, 182 |
| BstF5I | GGATG | 1 cut(s) | 270 |
| BstMAI | GTCTC | 1 cut(s) | 108 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 53 |
| BstSFI | CTRYAG | 1 cut(s) | 157 |
| BstV1I | GCAGC | 1 cut(s) | 143 |
| BstV2I | GAAGAC | 1 cut(s) | 231 |
| BsuRI | GGCC | 1 cut(s) | 187 |
| BtgZI | GCGATG | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 270 |
| BtsIMutI | CAGTG | 1 cut(s) | 37 |
| CciI | TCATGA | 1 cut(s) | 282 |
| CviAII | CATG | 4 cut(s) | 15, 85, 95, 283 |
| CviJI | RGCY | 4 cut(s) | 131, 156, 187, 250 |
| CviKI_1 | RGCY | 4 cut(s) | 131, 156, 187, 250 |
| DdeI | CTNAG | 2 cut(s) | 57, 182 |
| Eam1104I | CTCTTC | 1 cut(s) | 146 |
| EarI | CTCTTC | 1 cut(s) | 146 |
| EciI | GGCGGA | 1 cut(s) | 187 |
| Eco147I | AGGCCT | 1 cut(s) | 187 |
| Eco32I | GATATC | 1 cut(s) | 193 |
| EcoRV | GATATC | 1 cut(s) | 193 |
| FaeI | CATG | 4 cut(s) | 18, 88, 98, 286 |
| FaiI | YATR | 5 cut(s) | 16, 86, 96, 103, 284 |
| FatI | CATG | 4 cut(s) | 14, 84, 94, 282 |
| Fnu4HI | GCNGC | 1 cut(s) | 157 |
| FokI | GGATG | 1 cut(s) | 257 |
| Fsp4HI | GCNGC | 1 cut(s) | 157 |
| GluI | GCNGC | 1 cut(s) | 157 |
| GsaI | CCCAGC | 1 cut(s) | 135 |
| HaeIII | GGCC | 1 cut(s) | 187 |
| Hin1II | CATG | 4 cut(s) | 18, 88, 98, 286 |
| HindIII | AAGCTT | 1 cut(s) | 248 |
| HphI | GGTGA | 2 cut(s) | 16, 268 |
| Hpy166II | GTNNAC | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 3 cut(s) | 183, 214, 239 |
| Hpy188III | TCNNGA | 1 cut(s) | 283 |
| Hpy8I | GTNNAC | 1 cut(s) | 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 32 |
| HpyCH4V | TGCA | 2 cut(s) | 105, 159 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 53 |
| HpyF3I | CTNAG | 2 cut(s) | 57, 182 |
| Hsp92II | CATG | 4 cut(s) | 18, 88, 98, 286 |
| LguI | GCTCTTC | 1 cut(s) | 146 |
| LmnI | GCTCC | 2 cut(s) | 44, 128 |
| LpnPI | CCDG | 3 cut(s) | 117, 201, 247 |
| Lsp1109I | GCAGC | 1 cut(s) | 143 |
| MaeIII | GTNAC | 1 cut(s) | 20 |
| MboII | GAAGA | 4 cut(s) | 74, 163, 233, 236 |
| MluCI | AATT | 2 cut(s) | 75, 175 |
| MnlI | CCTC | 6 cut(s) | 52, 132, 177, 194, 239, 284 |
| MroXI | GAANNNNTTC | 1 cut(s) | 208 |
| MseI | TTAA | 1 cut(s) | 137 |
| MslI | CAYNNNNRTG | 1 cut(s) | 281 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 53 |
| NlaIII | CATG | 4 cut(s) | 18, 88, 98, 286 |
| PagI | TCATGA | 1 cut(s) | 282 |
| PceI | AGGCCT | 1 cut(s) | 187 |
| PciSI | GCTCTTC | 1 cut(s) | 146 |
| PdmI | GAANNNNTTC | 1 cut(s) | 208 |
| PkrI | GCNGC | 1 cut(s) | 158 |
| PspFI | CCCAGC | 1 cut(s) | 131 |
| PstI | CTGCAG | 1 cut(s) | 161 |
| RseI | CAYNNNNRTG | 1 cut(s) | 281 |
| SapI | GCTCTTC | 1 cut(s) | 146 |
| SaqAI | TTAA | 1 cut(s) | 137 |
| SatI | GCNGC | 1 cut(s) | 157 |
| SetI | ASST | 4 cut(s) | 133, 158, 231, 252 |
| SfcI | CTRYAG | 1 cut(s) | 157 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 281 |
| SmlI | CTYRAG | 1 cut(s) | 123 |
| SmoI | CTYRAG | 1 cut(s) | 123 |
| Sse9I | AATT | 2 cut(s) | 75, 175 |
| SseBI | AGGCCT | 1 cut(s) | 187 |
| SsiI | CCGC | 1 cut(s) | 172 |
| StuI | AGGCCT | 1 cut(s) | 187 |
| TaaI | ACNGT | 1 cut(s) | 32 |
| TasI | AATT | 2 cut(s) | 75, 175 |
| Tru1I | TTAA | 1 cut(s) | 137 |
| Tru9I | TTAA | 1 cut(s) | 137 |
| TscAI | CASTG | 1 cut(s) | 37 |
| TseI | GCWGC | 1 cut(s) | 156 |
| TspDTI | ATGAA | 2 cut(s) | 81, 234 |
| TspRI | CASTG | 1 cut(s) | 37 |
| XmnI | GAANNNNTTC | 1 cut(s) | 208 |