Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013114

Physical Location & Seq

Genomic Coordinates Reverse (-)

37454784 .. 37460933

Gene Structure 6150 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018835

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGCAGAGAGCTTTCACTCTGAAGCGCTCGCTCCAATCCCTCCACAGAATCGCCAATTCCACCACTAAAAGCCCATTAAGCTCAGGGCGTGCATTTTGCAATGCACCGTCGCCGTCACCGGCACCGTCAGCGTCCTCCGCATCAGCATCTGAGATCCGCAAGTACATGGGGTACACAGCCCTGGTCTTATTCTGCGGTGCCGCCACCTACTACTCCTTCCCGTTTCCCGAGAACGCCAGGCACAAGAAGGCCCAAATCTTCCGCTACGCCCCTCTACCTGAGGAGCTCCACACGGTCTCCAACTGGAGCGGGACCCACGAGGTCCAGACCCGGGTTTTCCACCAGCCCGAGACCCTTGAGGAGCTTGAGAAAGTAGTCAAGGAGGCCAATGAGAACAAGCACCGGATTCGGCCGGTCGGGTCTGGGTTGTCCCCCAATGGGATTGGATTGTCCAGGGCCGGGATGGTCAATTTGGCACTCATGGATAAGGTTTTGGAGGTGGATGAGGAGAAGAAGAGAGTGAGAGTGCAGGCTGGGATCAGGGTCCAGCAATTGGTGGATGGGATTAAGGATCAGGGCCTTACTTTGCAGAACTTTGCCTCCATAAGGGAGCAGCAGATTGGTGGCATTGTGCAGGTTGGTGCACATGGTACCGGTGCGAGGTTGCCTCCGATTGATGAGCAGGTGATCAGCATGAAATTGGTCACTCCTGCTAAGGGAACAATAGAGGTCTCCAAGGAGAAAGATCCAGAGCTGTTTTATTTAGCTCGTTGTGGCCTCGGCGGTCTGGGAGTTGTTGCTGAAGTTACCATCCAATGTGTTGACAGACAGGAGCTTCTAGAGCACACTATTGTTTCAAACATGGAAGAAATCAAGAAAAATCACAAGAAATTGCTCTCTGAGAACAAACATGTGAAGTATCTCTATATTCCATATACTGATACTGTTGTGGTTGTGACGTGCAACCCTGTCTCGAAATGGAAAGGTCCCCCAAAGTTCAAACCCAAATATACAACGGATGAAGCCATTCAGCACGTTCGTGATCTCTACAGGGAATGCCTCAAGAAGTACAGAGTAGTACCAGACAACAGTGTAGACATAAATGAGCTCTCTTTTACAGAGTTGAGAGATAAACTACTGGCCCTAAATCCTCTCAACAAAGATCATATCGTGAAAGTGAATCAAGCTGAGGCAGAGTTCTGGAGGAAGTCGGAGGGATACAGAGTAGGATGGAGTGATGAAATTCTAGGCTTTGATTGTGGTGGCCAACAGTGGGTTTCGGAGACTTGTTTTCCAGCTGGAACCCTTGCCAAACCAAGTATAAAAGACCTTGAATACATAGCAGATCTAAAGCAGCTAATAGAGAAGGAAGAGGTACCTGCACCTGCTCCAATAGAGCAGCGCTGGACAGCCAGCACTAAGAGCCCCATGAGTCCAGCTTCAAGCTCAAGAGAGGATGATATATTTTCATGGGTTGGCATAATCATGTACCTTCCAACAACAGATGCCCGCCAAAGAAAGGATATTACGGAAGAGTTTTTCCACTACAGGCTTCTAACTCAGACACGGTTGTGGGATACATATTCTTCTTATGAACACTGGGCCAAGATTGAGGTCCCAAAGGACAAAGAACAGCTTACTGCTCTGCAGGCAAGGCTAAGGAAGCGTTTTCCAGTTGATGCCTACAACAAAGCGCGAATGGAGTTAGACCCAAACCAGATCCTTTCAAACATCAAGCTGGAAAAGCTTTTCCCATTGTCTGATACCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0008152 GO:0009536 GO:0016491 GO:0016627 GO:0016632 GO:0016633 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0080049

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 ko01110 map00053 map01100 map01110

Pfam Domains

Protein Families

ALO FAD_binding_4

Protein Analysis

591

Amino Acids

66.78

Weight (kDa)

8.63

Isoelectric Point (pI)

44.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	112 - 242	3.9e-29	FAD binding domain
ALO	PF04030	269 - 580	2.8e-18	D-arabinono-1,4-lactone oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47930 AT3G47930
fragaria_vesca	FvH4_6g25110
malus_domestica	MD00G1048800.v1.1 MD00G1074000.v1.1
prunus_persica	Prupe.7G046300_v2.0.a1 Prupe.7G046300_v2.0.a1
pyrus_communis	pycom14g07300
rosa_chinensis	RchiOBHm_Chr2g0124941
rosa_laevigata	RLG00000018835
rosa_multiflora	Rmu_sc0008068.1_g000007
rosa_roxburghii	Rroxscaffold_2G00118570 Rroxscaffold_2G00118860
rosa_rugosa	Rorug02G0253600
rosa_samantha	Rh2AG313000 Rh2CG302400 Rh2DG338500
rosa_wichuraiana	Rw2G025280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	673, 1393
Acc36I	ACCTGC	4 cut(s)	625, 673, 1387, 1393
Acc65I	GGTACC	2 cut(s)	650, 1375
AccB1I	GGYRCC	4 cut(s)	121, 197, 650, 1375
AccB7I	CCANNNNNTGG	1 cut(s)	553
AccBSI	CCGCTC	1 cut(s)	309
AccI	GTMKAC	1 cut(s)	1095
AccII	CGCG	1 cut(s)	1696
AciI	CCGC	8 cut(s)	138, 157, 195, 201, 262, 309, 783, 1510
AclWI	GGATC	5 cut(s)	148, 545, 579, 740, 1714
AcoI	YGGCCR	2 cut(s)	410, 1264
AcsI	RAATTY	1 cut(s)	1242
AcuI	CTGAAG	2 cut(s)	41, 822
AfaI	GTAC	7 cut(s)	164, 173, 652, 1070, 1080, 1377, 1490
AfeI	AGCGCT	2 cut(s)	26, 1403
AfiI	CCNNNNNNNGG	9 cut(s)	331, 438, 459, 553, 606, 660, 716, 1273, 1519
AflIII	ACRYGT	1 cut(s)	910
AgeI	ACCGGT	1 cut(s)	653
AgsI	TTSAA	5 cut(s)	858, 1000, 1334, 1443, 1728
AjiI	CACGTC	1 cut(s)	960
AjnI	CCWGG	3 cut(s)	180, 236, 452
AleI	CACNNNNGTG	2 cut(s)	1038, 1570
AloI	GAACNNNNNNTCC	2 cut(s)	584, 616
Alw21I	GWGCWC	4 cut(s)	288, 646, 846, 1110
Alw26I	GTCTC	5 cut(s)	301, 344, 736, 976, 1277
Alw44I	GTGCAC	1 cut(s)	642
AlwI	GGATC	5 cut(s)	148, 545, 579, 740, 1714
AlwNI	CAGNNNCTG	1 cut(s)	149
Ama87I	CYCGRG	3 cut(s)	227, 330, 347
Aor51HI	AGCGCT	2 cut(s)	26, 1403
AoxI	GGCC	9 cut(s)	249, 384, 410, 456, 577, 775, 1140, 1264, 1602
ApaLI	GTGCAC	1 cut(s)	642
ApeKI	GCWGC	3 cut(s)	613, 1354, 1399
ApoI	RAATTY	1 cut(s)	1242
AsiGI	ACCGGT	1 cut(s)	653
Asp700I	GAANNNNTTC	1 cut(s)	1026
Asp718I	GGTACC	2 cut(s)	650, 1375
AspLEI	GCGC	3 cut(s)	27, 1404, 1696
AsuC2I	CCSGG	3 cut(s)	331, 332, 460
AsuHPI	GGTGA	2 cut(s)	108, 697
AvaI	CYCGRG	3 cut(s)	227, 330, 347
AvaII	GGWCC	5 cut(s)	312, 322, 544, 986, 1615
AxyI	CCTNAGG	1 cut(s)	279
BaeGI	GKGCMC	1 cut(s)	646
BaeI	ACNNNNGTAYC	2 cut(s)	933, 966
BalI	TGGCCA	1 cut(s)	1266
BanI	GGYRCC	4 cut(s)	121, 197, 650, 1375
BanII	GRGCYC	3 cut(s)	288, 1110, 1427
BauI	CACGAG	1 cut(s)	317
Bbv12I	GWGCWC	4 cut(s)	288, 646, 846, 1110
BbvCI	CCTCAGC	1 cut(s)	1188
BbvI	GCAGC	3 cut(s)	625, 1366, 1411
BccI	CCATC	4 cut(s)	457, 554, 818, 1224
BceAI	ACGGC	1 cut(s)	97
BcgI	CGANNNNNNTGC	2 cut(s)	389, 423
BciT130I	CCWGG	3 cut(s)	182, 238, 454
BciVI	GTATCC	2 cut(s)	1211, 1570
BclI	TGATCA	1 cut(s)	687
BcnI	CCSGG	3 cut(s)	331, 332, 460
BcoDI	GTCTC	5 cut(s)	301, 344, 736, 976, 1277
BfaI	CTAG	2 cut(s)	839, 1247
BfmI	CTRYAG	3 cut(s)	1048, 1546, 1646
BfoI	RGCGCY	2 cut(s)	28, 1405
BfuAI	ACCTGC	4 cut(s)	625, 673, 1387, 1393
BfuI	GTATCC	2 cut(s)	1211, 1570
BglII	AGATCT	1 cut(s)	1345
BisI	GCNGC	4 cut(s)	201, 614, 1355, 1400
BlsI	GCNGC	4 cut(s)	202, 615, 1356, 1401
Bme1390I	CCNGG	6 cut(s)	182, 238, 331, 332, 454, 460
Bme18I	GGWCC	5 cut(s)	312, 322, 544, 986, 1615
BmeT110I	CYCGRG	3 cut(s)	227, 330, 347
BmgBI	CACGTC	1 cut(s)	960
BmrFI	CCNGG	6 cut(s)	182, 238, 331, 332, 454, 460
BmrI	ACTGGG	1 cut(s)	1609
BmsI	GCATC	4 cut(s)	149, 155, 1495, 1669
BmuI	ACTGGG	1 cut(s)	1609
BplI	GAGNNNNNCTC	2 cut(s)	652, 684
BpmI	CTGGAG	2 cut(s)	325, 1222
Bpu10I	CCTNAGC	4 cut(s)	82, 714, 1188, 1658
BpuEI	CTTGAG	4 cut(s)	377, 386, 1046, 1432
BpuMI	CCSGG	3 cut(s)	331, 332, 460
BsaI	GGTCTC	3 cut(s)	301, 344, 736
BsaJI	CCNNGG	5 cut(s)	180, 330, 453, 735, 778
BsaWI	WCCGGW	2 cut(s)	402, 653
BsaXI	ACNNNNNCTCC	4 cut(s)	281, 311, 584, 614
Bsc4I	CCNNNNNNNGG	9 cut(s)	331, 438, 459, 553, 606, 660, 716, 1273, 1519
Bse118I	RCCGGY	3 cut(s)	118, 412, 653
Bse1I	ACTGG	4 cut(s)	308, 1143, 1604, 1673
Bse21I	CCTNAGG	1 cut(s)	279
Bse3DI	GCAATG	1 cut(s)	106
BseBI	CCWGG	3 cut(s)	182, 238, 454
BseDI	CCNNGG	5 cut(s)	180, 330, 453, 735, 778
BseGI	GGATG	7 cut(s)	468, 508, 565, 810, 1024, 1235, 1462
BseLI	CCNNNNNNNGG	9 cut(s)	331, 438, 459, 553, 606, 660, 716, 1273, 1519
BseMI	GCAATG	1 cut(s)	106
BseMII	CTCAG	6 cut(s)	96, 141, 270, 891, 1179, 1574
BseNI	ACTGG	4 cut(s)	308, 1143, 1604, 1673
BseRI	GAGGAG	3 cut(s)	296, 374, 521
BseSI	GKGCMC	1 cut(s)	646
BseX3I	CGGCCG	1 cut(s)	410
BseXI	GCAGC	3 cut(s)	625, 1366, 1411
BseYI	CCCAGC	1 cut(s)	533
BsgI	GTGCAG	3 cut(s)	548, 653, 1365
Bsh1236I	CGCG	1 cut(s)	1696
Bsh1285I	CGRYCG	2 cut(s)	413, 417
BshFI	GGCC	9 cut(s)	251, 386, 412, 458, 579, 777, 1142, 1266, 1604
BshNI	GGYRCC	4 cut(s)	121, 197, 650, 1375
BshTI	ACCGGT	1 cut(s)	653
BsiEI	CGRYCG	2 cut(s)	413, 417
BsiHKAI	GWGCWC	4 cut(s)	288, 646, 846, 1110
BsiHKCI	CYCGRG	3 cut(s)	227, 330, 347
BsiSI	CCGG	6 cut(s)	119, 331, 403, 413, 459, 654
BslFI	GGGAC	4 cut(s)	325, 415, 972, 1601
BslI	CCNNNNNNNGG	9 cut(s)	331, 438, 459, 553, 606, 660, 716, 1273, 1519
BsmAI	GTCTC	5 cut(s)	301, 344, 736, 976, 1277
BsmFI	GGGAC	4 cut(s)	325, 415, 972, 1601
BsmI	GAATGC	1 cut(s)	1061
BsnI	GGCC	9 cut(s)	251, 386, 412, 458, 579, 777, 1142, 1266, 1604
Bso31I	GGTCTC	3 cut(s)	301, 344, 736
BsoBI	CYCGRG	3 cut(s)	227, 330, 347
Bsp1286I	GDGCHC	5 cut(s)	288, 646, 846, 1110, 1427
Bsp143I	GATC	9 cut(s)	153, 537, 571, 687, 745, 1042, 1162, 1345, 1719
BspACI	CCGC	8 cut(s)	138, 157, 195, 201, 262, 309, 783, 1510
BspANI	GGCC	9 cut(s)	251, 386, 412, 458, 579, 777, 1142, 1266, 1604
BspCNI	CTCAG	6 cut(s)	95, 142, 271, 892, 1180, 1573
BspFNI	CGCG	1 cut(s)	1696
BspMAI	CTGCAG	1 cut(s)	1650
BspMI	ACCTGC	4 cut(s)	625, 673, 1387, 1393
BspPI	GGATC	5 cut(s)	148, 545, 579, 740, 1714
BspT107I	GGYRCC	4 cut(s)	121, 197, 650, 1375
BspTNI	GGTCTC	3 cut(s)	301, 344, 736
BsrBI	CCGCTC	1 cut(s)	309
BsrDI	GCAATG	1 cut(s)	106
BsrFI	RCCGGY	3 cut(s)	118, 412, 653
BsrI	ACTGG	4 cut(s)	308, 1143, 1604, 1673
BssAI	RCCGGY	3 cut(s)	118, 412, 653
BssECI	CCNNGG	5 cut(s)	180, 330, 453, 735, 778
BssMI	GATC	9 cut(s)	153, 537, 571, 687, 745, 1042, 1162, 1345, 1719
BssSI	CACGAG	1 cut(s)	317
BssT1I	CCWWGG	1 cut(s)	735
Bst2BI	CACGAG	1 cut(s)	317
Bst2UI	CCWGG	3 cut(s)	182, 238, 454
Bst4CI	ACNGT	7 cut(s)	108, 126, 295, 946, 1091, 1272, 1569
Bst6I	CTCTTC	3 cut(s)	509, 1365, 1527
BstC8I	GCNNGC	6 cut(s)	29, 90, 531, 1414, 1510, 1650
BstDEI	CTNAG	9 cut(s)	82, 150, 279, 714, 900, 1188, 1419, 1560, 1658
BstENI	CCTNNNNNAGG	1 cut(s)	604
BstF5I	GGATG	7 cut(s)	468, 508, 565, 810, 1024, 1235, 1462
BstFNI	CGCG	1 cut(s)	1696
BstH2I	RGCGCY	2 cut(s)	28, 1405
BstHHI	GCGC	3 cut(s)	27, 1404, 1696
BstKTI	GATC	9 cut(s)	156, 540, 574, 690, 748, 1045, 1165, 1348, 1722
BstMAI	GTCTC	5 cut(s)	301, 344, 736, 976, 1277
BstMBI	GATC	9 cut(s)	153, 537, 571, 687, 745, 1042, 1162, 1345, 1719
BstMCI	CGRYCG	2 cut(s)	413, 417
BstMWI	GCNNNNNNNGC	9 cut(s)	78, 128, 137, 841, 1422, 1649, 1654, 1663, 1744
BstNI	CCWGG	3 cut(s)	182, 238, 454
BstNSI	RCATGY	1 cut(s)	914
BstSCI	CCNGG	6 cut(s)	180, 236, 329, 330, 452, 458
BstSFI	CTRYAG	3 cut(s)	1048, 1546, 1646
BstSLI	GKGCMC	1 cut(s)	646
BstUI	CGCG	1 cut(s)	1696
BstV1I	GCAGC	3 cut(s)	625, 1366, 1411
BstX2I	RGATCY	4 cut(s)	153, 745, 1345, 1719
BstYI	RGATCY	4 cut(s)	153, 745, 1345, 1719
BstZI	CGGCCG	1 cut(s)	410
Bsu36I	CCTNAGG	1 cut(s)	279
BsuI	GTATCC	2 cut(s)	1211, 1570
BsuRI	GGCC	9 cut(s)	251, 386, 412, 458, 579, 777, 1142, 1266, 1604
BtrI	CACGTC	1 cut(s)	960
BtsCI	GGATG	7 cut(s)	468, 508, 565, 810, 1024, 1235, 1462
BtsIMutI	CAGTG	3 cut(s)	1096, 1277, 1597
BveI	ACCTGC	4 cut(s)	625, 673, 1387, 1393
Cac8I	GCNNGC	6 cut(s)	29, 90, 531, 1414, 1510, 1650
CaiI	CAGNNNCTG	1 cut(s)	149
CfoI	GCGC	3 cut(s)	27, 1404, 1696
Cfr10I	RCCGGY	3 cut(s)	118, 412, 653
Cfr9I	CCCGGG	1 cut(s)	330
CseI	GACGC	1 cut(s)	120
Csp6I	GTAC	7 cut(s)	163, 172, 651, 1069, 1079, 1376, 1489
CspAI	ACCGGT	1 cut(s)	653
CviAII	CATG	9 cut(s)	166, 481, 647, 694, 862, 911, 1429, 1470, 1486
CviQI	GTAC	7 cut(s)	163, 172, 651, 1069, 1079, 1376, 1489
DdeI	CTNAG	9 cut(s)	82, 150, 279, 714, 900, 1188, 1419, 1560, 1658
DpnI	GATC	9 cut(s)	155, 539, 573, 689, 747, 1044, 1164, 1347, 1721
DpnII	GATC	9 cut(s)	153, 537, 571, 687, 745, 1042, 1162, 1345, 1719
EaeI	YGGCCR	2 cut(s)	410, 1264
EagI	CGGCCG	1 cut(s)	410
Eam1104I	CTCTTC	3 cut(s)	509, 1365, 1527
EarI	CTCTTC	3 cut(s)	509, 1365, 1527
Ecl136II	GAGCTC	2 cut(s)	286, 1108
EclXI	CGGCCG	1 cut(s)	410
Eco130I	CCWWGG	1 cut(s)	735
Eco24I	GRGCYC	3 cut(s)	288, 1110, 1427
Eco31I	GGTCTC	3 cut(s)	301, 344, 736
Eco47I	GGWCC	5 cut(s)	312, 322, 544, 986, 1615
Eco47III	AGCGCT	2 cut(s)	26, 1403
Eco52I	CGGCCG	1 cut(s)	410
Eco53kI	GAGCTC	2 cut(s)	286, 1108
Eco57I	CTGAAG	2 cut(s)	41, 822
Eco81I	CCTNAGG	1 cut(s)	279
Eco88I	CYCGRG	3 cut(s)	227, 330, 347
EcoICRI	GAGCTC	2 cut(s)	286, 1108
EcoNI	CCTNNNNNAGG	1 cut(s)	604
EcoO109I	RGGNCCY	4 cut(s)	312, 577, 986, 1615
EcoRII	CCWGG	3 cut(s)	180, 236, 452
EcoT14I	CCWWGG	1 cut(s)	735
EcoT38I	GRGCYC	3 cut(s)	288, 1110, 1427
ErhI	CCWWGG	1 cut(s)	735
FaeI	CATG	9 cut(s)	169, 484, 650, 697, 865, 914, 1432, 1473, 1489
FalI	AAGNNNNNCTT	2 cut(s)	1620, 1652
FaqI	GGGAC	4 cut(s)	325, 415, 972, 1601
FatI	CATG	9 cut(s)	165, 480, 646, 693, 861, 910, 1428, 1469, 1485
FauI	CCCGC	2 cut(s)	302, 1517
FbaI	TGATCA	1 cut(s)	687
FblI	GTMKAC	1 cut(s)	1095
Fnu4HI	GCNGC	4 cut(s)	201, 614, 1355, 1400
FokI	GGATG	7 cut(s)	475, 515, 572, 797, 1031, 1242, 1469
FriOI	GRGCYC	3 cut(s)	288, 1110, 1427
Fsp4HI	GCNGC	4 cut(s)	201, 614, 1355, 1400
FspBI	CTAG	2 cut(s)	839, 1247
GlaI	GCGC	3 cut(s)	26, 1403, 1695
GluI	GCNGC	4 cut(s)	201, 614, 1355, 1400
GsaI	CCCAGC	1 cut(s)	537
GsuI	CTGGAG	2 cut(s)	325, 1222
HaeII	RGCGCY	2 cut(s)	28, 1405
HaeIII	GGCC	9 cut(s)	251, 386, 412, 458, 579, 777, 1142, 1266, 1604
HapII	CCGG	6 cut(s)	119, 331, 403, 413, 459, 654
HgaI	GACGC	1 cut(s)	120
HhaI	GCGC	3 cut(s)	27, 1404, 1696
Hin1II	CATG	9 cut(s)	169, 484, 650, 697, 865, 914, 1432, 1473, 1489
Hin6I	GCGC	3 cut(s)	25, 1402, 1694
HinP1I	GCGC	3 cut(s)	25, 1402, 1694
HincII	GTYRAC	1 cut(s)	823
HindII	GTYRAC	1 cut(s)	823
HindIII	AAGCTT	1 cut(s)	1745
HinfI	GANTC	4 cut(s)	48, 406, 1180, 1432
HpaII	CCGG	6 cut(s)	119, 331, 403, 413, 459, 654
HphI	GGTGA	2 cut(s)	108, 697
Hpy166II	GTNNAC	4 cut(s)	174, 644, 823, 1096
Hpy188I	TCNGA	8 cut(s)	21, 151, 672, 901, 1213, 1282, 1563, 1762
Hpy8I	GTNNAC	4 cut(s)	174, 644, 823, 1096
Hpy99I	CGWCG	1 cut(s)	112
HpyAV	CCTTC	4 cut(s)	226, 241, 1360, 1502
HpyCH4III	ACNGT	7 cut(s)	108, 126, 295, 946, 1091, 1272, 1569
HpyCH4IV	ACGT	2 cut(s)	959, 1035
HpyF10VI	GCNNNNNNNGC	9 cut(s)	78, 128, 137, 841, 1422, 1649, 1654, 1663, 1744
HpyF3I	CTNAG	9 cut(s)	82, 150, 279, 714, 900, 1188, 1419, 1560, 1658
HpySE526I	ACGT	2 cut(s)	959, 1035
Hsp92II	CATG	9 cut(s)	169, 484, 650, 697, 865, 914, 1432, 1473, 1489
HspAI	GCGC	3 cut(s)	25, 1402, 1694
KflI	GGGWCCC	1 cut(s)	312
KpnI	GGTACC	2 cut(s)	654, 1379
Ksp22I	TGATCA	1 cut(s)	687
Kzo9I	GATC	9 cut(s)	153, 537, 571, 687, 745, 1042, 1162, 1345, 1719
LmnI	GCTCC	8 cut(s)	36, 283, 291, 306, 361, 610, 832, 1393
Lsp1109I	GCAGC	3 cut(s)	625, 1366, 1411
LweI	GCATC	4 cut(s)	149, 155, 1495, 1669
MaeI	CTAG	2 cut(s)	839, 1247
MaeII	ACGT	2 cut(s)	959, 1035
MaeIII	GTNAC	4 cut(s)	114, 703, 805, 955
MalI	GATC	9 cut(s)	155, 539, 573, 689, 747, 1044, 1164, 1347, 1721
MbiI	CCGCTC	1 cut(s)	309
MboI	GATC	9 cut(s)	153, 537, 571, 687, 745, 1042, 1162, 1345, 1719
MboII	GAAGA	7 cut(s)	250, 523, 526, 878, 1382, 1544, 1578
MfeI	CAATTG	1 cut(s)	551
MflI	RGATCY	4 cut(s)	153, 745, 1345, 1719
MhlI	GDGCHC	5 cut(s)	288, 646, 846, 1110, 1427
MlsI	TGGCCA	1 cut(s)	1266
MluCI	AATT	6 cut(s)	55, 469, 551, 698, 890, 1242
MluNI	TGGCCA	1 cut(s)	1266
MlyI	GAGTC	1 cut(s)	1441
MmeI	TCCRAC	3 cut(s)	324, 1191, 1520
Mox20I	TGGCCA	1 cut(s)	1266
MroXI	GAANNNNTTC	1 cut(s)	1026
MscI	TGGCCA	1 cut(s)	1266
MseI	TTAA	2 cut(s)	77, 567
MslI	CAYNNNNRTG	3 cut(s)	1038, 1484, 1570
Msp20I	TGGCCA	1 cut(s)	1266
MspA1I	CMGCKG	1 cut(s)	1298
MspI	CCGG	6 cut(s)	119, 331, 403, 413, 459, 654
MspR9I	CCNGG	6 cut(s)	182, 238, 331, 332, 454, 460
MunI	CAATTG	1 cut(s)	551
Mva1269I	GAATGC	1 cut(s)	1061
MvaI	CCWGG	3 cut(s)	182, 238, 454
MvnI	CGCG	1 cut(s)	1696
MwoI	GCNNNNNNNGC	9 cut(s)	78, 128, 137, 841, 1422, 1649, 1654, 1663, 1744
NciI	CCSGG	3 cut(s)	331, 332, 460
NdeII	GATC	9 cut(s)	153, 537, 571, 687, 745, 1042, 1162, 1345, 1719
NlaIII	CATG	9 cut(s)	169, 484, 650, 697, 865, 914, 1432, 1473, 1489
NmeAIII	GCCGAG	1 cut(s)	759
NmuCI	GTSAC	3 cut(s)	114, 703, 955
NspI	RCATGY	1 cut(s)	914
OliI	CACNNNNGTG	2 cut(s)	1038, 1570
PaqCI	CACCTGC	2 cut(s)	673, 1393
PciI	ACATGT	1 cut(s)	910
PctI	GAATGC	1 cut(s)	1061
PdmI	GAANNNNTTC	1 cut(s)	1026
PfeI	GAWTC	3 cut(s)	48, 406, 1180
PflMI	CCANNNNNTGG	1 cut(s)	553
PinAI	ACCGGT	1 cut(s)	653
PkrI	GCNGC	4 cut(s)	202, 615, 1356, 1401
PleI	GAGTC	1 cut(s)	1440
PpsI	GAGTC	1 cut(s)	1440
PpuMI	RGGWCCY	3 cut(s)	312, 986, 1615
PscI	ACATGT	1 cut(s)	910
Psp124BI	GAGCTC	2 cut(s)	288, 1110
Psp5II	RGGWCCY	3 cut(s)	312, 986, 1615
Psp6I	CCWGG	3 cut(s)	180, 236, 452
PspFI	CCCAGC	1 cut(s)	533
PspGI	CCWGG	3 cut(s)	180, 236, 452
PspPPI	RGGWCCY	3 cut(s)	312, 986, 1615
PstI	CTGCAG	1 cut(s)	1650
PstNI	CAGNNNCTG	1 cut(s)	149
PsuI	RGATCY	4 cut(s)	153, 745, 1345, 1719
PvuII	CAGCTG	1 cut(s)	1298
RsaI	GTAC	7 cut(s)	164, 173, 652, 1070, 1080, 1377, 1490
RsaNI	GTAC	7 cut(s)	163, 172, 651, 1069, 1079, 1376, 1489
RseI	CAYNNNNRTG	3 cut(s)	1038, 1484, 1570
SacI	GAGCTC	2 cut(s)	288, 1110
SaqAI	TTAA	2 cut(s)	77, 567
SatI	GCNGC	4 cut(s)	201, 614, 1355, 1400
Sau3AI	GATC	9 cut(s)	153, 537, 571, 687, 745, 1042, 1162, 1345, 1719
SchI	GAGTC	1 cut(s)	1441
ScrFI	CCNGG	6 cut(s)	182, 238, 331, 332, 454, 460
SduI	GDGCHC	5 cut(s)	288, 646, 846, 1110, 1427
SfaNI	GCATC	4 cut(s)	149, 155, 1495, 1669
SfcI	CTRYAG	3 cut(s)	1048, 1546, 1646
SinI	GGWCC	5 cut(s)	312, 322, 544, 986, 1615
SmaI	CCCGGG	1 cut(s)	332
SmiMI	CAYNNNNRTG	3 cut(s)	1038, 1484, 1570
SmlI	CTYRAG	4 cut(s)	356, 365, 1061, 1447
SmoI	CTYRAG	4 cut(s)	356, 365, 1061, 1447
Sse9I	AATT	6 cut(s)	55, 469, 551, 698, 890, 1242
SsiI	CCGC	8 cut(s)	138, 157, 195, 201, 262, 309, 783, 1510
SspMI	CTAG	2 cut(s)	839, 1247
SstI	GAGCTC	2 cut(s)	288, 1110
StyD4I	CCNGG	6 cut(s)	180, 236, 329, 330, 452, 458
StyI	CCWWGG	1 cut(s)	735
TaaI	ACNGT	7 cut(s)	108, 126, 295, 946, 1091, 1272, 1569
TaiI	ACGT	2 cut(s)	962, 1038
TaqI	TCGA	1 cut(s)	974
TasI	AATT	6 cut(s)	55, 469, 551, 698, 890, 1242
TatI	WGTACW	2 cut(s)	162, 1068
TauI	GCSGC	1 cut(s)	203
TfiI	GAWTC	3 cut(s)	48, 406, 1180
Tru1I	TTAA	2 cut(s)	77, 567
Tru9I	TTAA	2 cut(s)	77, 567
TscAI	CASTG	3 cut(s)	1096, 1277, 1604
TseFI	GTSAC	3 cut(s)	114, 703, 955
TseI	GCWGC	3 cut(s)	613, 1354, 1399
Tsp45I	GTSAC	3 cut(s)	114, 703, 955
TspDTI	ATGAA	5 cut(s)	710, 1035, 1254, 1458, 1608
TspGWI	ACGGA	2 cut(s)	1031, 1544
TspMI	CCCGGG	1 cut(s)	330
TspRI	CASTG	3 cut(s)	1096, 1277, 1604
Van91I	CCANNNNNTGG	1 cut(s)	553
VneI	GTGCAC	1 cut(s)	642
VpaK11BI	GGWCC	5 cut(s)	312, 322, 544, 986, 1615
XagI	CCTNNNNNAGG	1 cut(s)	604
XapI	RAATTY	1 cut(s)	1242
XbaI	TCTAGA	1 cut(s)	838
XceI	RCATGY	1 cut(s)	914
XcmI	CCANNNNNNNNNTGG	1 cut(s)	460
XmaI	CCCGGG	1 cut(s)	330
XmiI	GTMKAC	1 cut(s)	1095
XmnI	GAANNNNTTC	1 cut(s)	1026
XspI	CTAG	2 cut(s)	839, 1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.