Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0013114

Physical Location & Seq

Genomic Coordinates Reverse (-)

40106378 .. 40112585

Gene Structure 6208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG313000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGCAGAGAGCTCTCACTGTGAAGCGCTCGCTCCAATCCCTCCACAGAATCGCCAATTCCACCACTAAAAACCCAGGGCGTGCATTTTGCAATGCACCGTCACCGTCACCGGCACCATCGGCGTCCTCCGCATCCGCATCAGCATCAGCATCAGCATCTGAGGTCCGCAAGTACATGGGGTACACAGCCCTGGTCTTATTCTGCGGTGCGGCCACCTACTACTCCTTCCCATTTCCCGAGAACGCCAAGCACAAGAAGGCCCAAATCTTCCGGTACGCCCCTCTACCTGAGGAGCTCCACACGGTCTCAAACTGGAGCGGGACCCACGAGGTCCAGACCCGGGTTTTCCACCAGCCCGAGACCCTTGAGGAGCTTGAGAAAGTAGTCAAGGAGGCGAATGAGAACAAGTACCGGATTCGGCCGGTCGGCTCTGGGTTGTCCCCCAATGGGATTGGATTGTCCAGGGCTGGGATGGTCAATTTGGCGCTCATGGATCAGGTTTTGGAGGTGGATAAGGAGAAGAAGAGAGTGAGAGTGCAAGCTGGGATCAGGGTCCAGCAATTGGTGGATGGGATTAAGGATCAGGGCCTTACTTTGCAGAACTTTGCCTCCATAAGGGAGCAACAGATTGGTGGCATTGTGCAGGTTGGTGCACATGGTACTGGTGCGAGGTTGCCTCCGATTGATGAGCAGGTGATCAGCATGAAATTGGTCACTCCTGCTAAGGGAACAATAGAGGTCTCCAAGGAGAAAGATCCAGAGCTGTTTTATTTAGCTCGCTGTGGCCTCGGCGGTCTGGGAGTTGTTGCTGAAGTTACCATCCAATGTGTTGACAGACAGGAGCTTGTAGAGCACACTACTGTTTCAAACATGGAAGAAATCAAGAAAAATCACAAGAAATTGCTCTCTGAGAACAAACATGTGAAGTATCTCTATATTCCATATACTGATACTGTTGTGGTTGTGACGTGCAACCCTGTCTCGAAATGGAAAGGTCCCCCAAAGTTCAAACCCAAATATACAACGGATGAAGCCATTCAGCACGTTTGTGATCTCTACAGGGAATGCCTCAAGAAGTACAGAGTAATACCAGACAACAGTGTAGACATAAATGAGCTCTCTTTTACAGAGTTGAGAGATAAACTACTGGCCCTAAATCCTCTCAACAAAGATCATATCGTGAAAGTGAATCAAGCTGAGGCAGAGTTCTGGAGGAAGTCGGAGGGATACAGAGTAGGATGGAGTGATGAAATTCTGGGCTTTGATTGTGGTGGCCAACAGTGGGTTTCGGAGACTTGTTTTCCAGCTGGAACCCTTGCCAAACCAAGTATGAAAGACCTTGAATACATAGCAGATCTAAAACAGCTAATAGAGAAAGAAGAGATACCTGCACCTGCTCCAATAGAGCAGCGCTGGACAGCCAGCACTAAGAGCCCCATGAGTCCAGCTTCAAGCTCAAGAGAGGATGATATATTTTCATGGGTTGGCATAATCATGTACCTTCCAACAACAGATGCCCGCCAAAGAAAGGATATTACGGAAGAGTTTTTCCACTACAGGCATCTAACCCAGACACGGTTGTGGGATACGTTTTCTTCTTATGAACACTGGGCCAAGATTGAGGTCCCAAAGGACAAAGAACAGCTTACCGCTCTGCAGGCAAGGCTAAGGAAGCGTTTTCCAGTTGACGCCTACAACAAAGCACGAACGGAATTAGACCCAAACCGGATCCTTTCAAACATCAAGCTGGAAAAGCTTTTCCCATTGTCTGATACCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0008152 GO:0009536 GO:0016491 GO:0016627 GO:0016632 GO:0016633 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0080049

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 ko01110 map00053 map01100 map01110

Pfam Domains

Protein Families

ALO FAD_binding_4

Protein Analysis

593

Amino Acids

66.9

Weight (kDa)

8.69

Isoelectric Point (pI)

43.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	115 - 245	1.7e-28	FAD binding domain
ALO	PF04030	272 - 583	4.5e-19	D-arabinono-1,4-lactone oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47930 AT3G47930
fragaria_vesca	FvH4_6g25110
malus_domestica	MD00G1048800.v1.1 MD00G1074000.v1.1
prunus_persica	Prupe.7G046300_v2.0.a1 Prupe.7G046300_v2.0.a1
pyrus_communis	pycom14g07300
rosa_chinensis	RchiOBHm_Chr2g0124941
rosa_laevigata	RLG00000018835
rosa_multiflora	Rmu_sc0008068.1_g000007
rosa_roxburghii	Rroxscaffold_2G00118570 Rroxscaffold_2G00118860
rosa_rugosa	Rorug02G0253600
rosa_samantha	Rh2AG313000 Rh2CG302400 Rh2DG338500
rosa_wichuraiana	Rw2G025280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	682, 1402
Acc36I	ACCTGC	4 cut(s)	634, 682, 1396, 1402
AccB1I	GGYRCC	1 cut(s)	112
AccB7I	CCANNNNNTGG	1 cut(s)	562
AccBSI	CCGCTC	2 cut(s)	318, 1652
AccI	GTMKAC	1 cut(s)	1104
AciI	CCGC	9 cut(s)	129, 135, 166, 204, 209, 318, 792, 1519, 1650
AclWI	GGATC	6 cut(s)	501, 554, 588, 749, 1723, 1736
AcoI	YGGCCR	3 cut(s)	210, 419, 1273
AcsI	RAATTY	1 cut(s)	1251
AcuI	CTGAAG	1 cut(s)	831
AcyI	GRCGYC	2 cut(s)	122, 1689
AfaI	GTAC	7 cut(s)	173, 182, 275, 410, 661, 1079, 1499
AfeI	AGCGCT	2 cut(s)	26, 1412
AfiI	CCNNNNNNNGG	9 cut(s)	340, 447, 468, 562, 615, 725, 1282, 1528, 1575
AflIII	ACRYGT	1 cut(s)	919
AgsI	TTSAA	5 cut(s)	867, 1009, 1343, 1452, 1737
AjiI	CACGTC	1 cut(s)	969
AjnI	CCWGG	3 cut(s)	73, 189, 461
AleI	CACNNNNGTG	2 cut(s)	1047, 1579
AloI	GAACNNNNNNTCC	2 cut(s)	593, 625
Alw21I	GWGCWC	5 cut(s)	13, 297, 655, 855, 1119
Alw26I	GTCTC	5 cut(s)	310, 353, 745, 985, 1286
Alw44I	GTGCAC	1 cut(s)	651
AlwI	GGATC	6 cut(s)	501, 554, 588, 749, 1723, 1736
AlwNI	CAGNNNCTG	1 cut(s)	158
Ama87I	CYCGRG	3 cut(s)	236, 339, 356
Aor51HI	AGCGCT	2 cut(s)	26, 1412
AoxI	GGCC	8 cut(s)	210, 258, 419, 586, 784, 1149, 1273, 1611
ApaLI	GTGCAC	1 cut(s)	651
ApeKI	GCWGC	1 cut(s)	1408
ApoI	RAATTY	1 cut(s)	1251
Asp700I	GAANNNNTTC	1 cut(s)	1035
AspLEI	GCGC	3 cut(s)	27, 487, 1413
AsuC2I	CCSGG	2 cut(s)	340, 341
AsuHPI	GGTGA	3 cut(s)	93, 99, 706
AvaI	CYCGRG	3 cut(s)	236, 339, 356
AvaII	GGWCC	6 cut(s)	163, 321, 331, 553, 995, 1624
AxyI	CCTNAGG	1 cut(s)	288
BaeGI	GKGCMC	1 cut(s)	655
BaeI	ACNNNNGTAYC	2 cut(s)	942, 975
BalI	TGGCCA	1 cut(s)	1275
BamHI	GGATCC	1 cut(s)	1728
BanI	GGYRCC	1 cut(s)	112
BanII	GRGCYC	4 cut(s)	13, 297, 1119, 1436
BauI	CACGAG	1 cut(s)	326
Bbv12I	GWGCWC	5 cut(s)	13, 297, 655, 855, 1119
BbvCI	CCTCAGC	1 cut(s)	1197
BbvI	GCAGC	1 cut(s)	1420
BccI	CCATC	5 cut(s)	124, 466, 563, 827, 1233
BciT130I	CCWGG	3 cut(s)	75, 191, 463
BciVI	GTATCC	2 cut(s)	1220, 1579
BclI	TGATCA	1 cut(s)	696
BcnI	CCSGG	2 cut(s)	340, 341
BcoDI	GTCTC	5 cut(s)	310, 353, 745, 985, 1286
BfmI	CTRYAG	3 cut(s)	1057, 1555, 1655
BfoI	RGCGCY	3 cut(s)	28, 488, 1414
BfuAI	ACCTGC	4 cut(s)	634, 682, 1396, 1402
BfuI	GTATCC	2 cut(s)	1220, 1579
BglII	AGATCT	1 cut(s)	1354
BisI	GCNGC	2 cut(s)	210, 1409
BlsI	GCNGC	2 cut(s)	211, 1410
Bme1390I	CCNGG	5 cut(s)	75, 191, 340, 341, 463
Bme18I	GGWCC	6 cut(s)	163, 321, 331, 553, 995, 1624
BmeT110I	CYCGRG	3 cut(s)	236, 339, 356
BmgBI	CACGTC	1 cut(s)	969
BmiI	GGNNCC	8 cut(s)	114, 322, 323, 554, 997, 1312, 1626, 1730
BmrFI	CCNGG	5 cut(s)	75, 191, 340, 341, 463
BmrI	ACTGGG	1 cut(s)	1618
BmsI	GCATC	7 cut(s)	140, 146, 152, 158, 164, 1504, 1570
BmuI	ACTGGG	1 cut(s)	1618
BplI	GAGNNNNNCTC	2 cut(s)	661, 693
BpmI	CTGGAG	2 cut(s)	334, 1231
Bpu10I	CCTNAGC	3 cut(s)	723, 1197, 1667
BpuEI	CTTGAG	4 cut(s)	386, 395, 1055, 1441
BpuMI	CCSGG	2 cut(s)	340, 341
BsaHI	GRCGYC	2 cut(s)	122, 1689
BsaI	GGTCTC	3 cut(s)	310, 353, 745
BsaJI	CCNNGG	7 cut(s)	73, 74, 189, 339, 462, 744, 787
BsaWI	WCCGGW	3 cut(s)	270, 411, 1725
BsaXI	ACNNNNNCTCC	2 cut(s)	593, 623
Bsc4I	CCNNNNNNNGG	9 cut(s)	340, 447, 468, 562, 615, 725, 1282, 1528, 1575
Bse118I	RCCGGY	2 cut(s)	109, 421
Bse1I	ACTGG	5 cut(s)	317, 667, 1152, 1613, 1682
Bse21I	CCTNAGG	1 cut(s)	288
Bse3DI	GCAATG	1 cut(s)	97
BseBI	CCWGG	3 cut(s)	75, 191, 463
BseDI	CCNNGG	7 cut(s)	73, 74, 189, 339, 462, 744, 787
BseGI	GGATG	7 cut(s)	131, 477, 574, 819, 1033, 1244, 1471
BseLI	CCNNNNNNNGG	9 cut(s)	340, 447, 468, 562, 615, 725, 1282, 1528, 1575
BseMI	GCAATG	1 cut(s)	97
BseMII	CTCAG	4 cut(s)	150, 279, 900, 1188
BseNI	ACTGG	5 cut(s)	317, 667, 1152, 1613, 1682
BseRI	GAGGAG	2 cut(s)	305, 383
BseSI	GKGCMC	1 cut(s)	655
BseX3I	CGGCCG	1 cut(s)	419
BseXI	GCAGC	1 cut(s)	1420
BseYI	CCCAGC	2 cut(s)	467, 542
BsgI	GTGCAG	2 cut(s)	662, 1374
Bsh1285I	CGRYCG	2 cut(s)	422, 426
BshFI	GGCC	8 cut(s)	212, 260, 421, 588, 786, 1151, 1275, 1613
BshNI	GGYRCC	1 cut(s)	112
BsiEI	CGRYCG	2 cut(s)	422, 426
BsiHKAI	GWGCWC	5 cut(s)	13, 297, 655, 855, 1119
BsiHKCI	CYCGRG	3 cut(s)	236, 339, 356
BsiSI	CCGG	6 cut(s)	110, 271, 340, 412, 422, 1726
BslFI	GGGAC	4 cut(s)	334, 424, 981, 1610
BslI	CCNNNNNNNGG	9 cut(s)	340, 447, 468, 562, 615, 725, 1282, 1528, 1575
BsmAI	GTCTC	5 cut(s)	310, 353, 745, 985, 1286
BsmFI	GGGAC	4 cut(s)	334, 424, 981, 1610
BsmI	GAATGC	1 cut(s)	1070
BsnI	GGCC	8 cut(s)	212, 260, 421, 588, 786, 1151, 1275, 1613
Bso31I	GGTCTC	3 cut(s)	310, 353, 745
BsoBI	CYCGRG	3 cut(s)	236, 339, 356
Bsp1286I	GDGCHC	6 cut(s)	13, 297, 655, 855, 1119, 1436
Bsp143I	GATC	9 cut(s)	493, 546, 580, 696, 754, 1051, 1171, 1354, 1728
BspACI	CCGC	9 cut(s)	129, 135, 166, 204, 209, 318, 792, 1519, 1650
BspANI	GGCC	8 cut(s)	212, 260, 421, 588, 786, 1151, 1275, 1613
BspCNI	CTCAG	4 cut(s)	151, 280, 901, 1189
BspLI	GGNNCC	8 cut(s)	114, 322, 323, 554, 997, 1312, 1626, 1730
BspMAI	CTGCAG	1 cut(s)	1659
BspMI	ACCTGC	4 cut(s)	634, 682, 1396, 1402
BspPI	GGATC	6 cut(s)	501, 554, 588, 749, 1723, 1736
BspT107I	GGYRCC	1 cut(s)	112
BspTNI	GGTCTC	3 cut(s)	310, 353, 745
BsrBI	CCGCTC	2 cut(s)	318, 1652
BsrDI	GCAATG	1 cut(s)	97
BsrFI	RCCGGY	2 cut(s)	109, 421
BsrI	ACTGG	5 cut(s)	317, 667, 1152, 1613, 1682
BssAI	RCCGGY	2 cut(s)	109, 421
BssECI	CCNNGG	7 cut(s)	73, 74, 189, 339, 462, 744, 787
BssMI	GATC	9 cut(s)	493, 546, 580, 696, 754, 1051, 1171, 1354, 1728
BssNI	GRCGYC	2 cut(s)	122, 1689
BssSI	CACGAG	1 cut(s)	326
BssT1I	CCWWGG	1 cut(s)	744
Bst2BI	CACGAG	1 cut(s)	326
Bst2UI	CCWGG	3 cut(s)	75, 191, 463
Bst4CI	ACNGT	9 cut(s)	19, 99, 105, 304, 862, 955, 1100, 1281, 1578
Bst6I	CTCTTC	3 cut(s)	518, 1374, 1536
BstACI	GRCGYC	2 cut(s)	122, 1689
BstC8I	GCNNGC	7 cut(s)	29, 81, 540, 778, 1423, 1519, 1659
BstDEI	CTNAG	7 cut(s)	159, 288, 723, 909, 1197, 1428, 1667
BstENI	CCTNNNNNAGG	1 cut(s)	613
BstF5I	GGATG	7 cut(s)	131, 477, 574, 819, 1033, 1244, 1471
BstH2I	RGCGCY	3 cut(s)	28, 488, 1414
BstHHI	GCGC	3 cut(s)	27, 487, 1413
BstKTI	GATC	9 cut(s)	496, 549, 583, 699, 757, 1054, 1174, 1357, 1731
BstMAI	GTCTC	5 cut(s)	310, 353, 745, 985, 1286
BstMBI	GATC	9 cut(s)	493, 546, 580, 696, 754, 1051, 1171, 1354, 1728
BstMCI	CGRYCG	2 cut(s)	422, 426
BstMWI	GCNNNNNNNGC	8 cut(s)	119, 128, 850, 1431, 1658, 1663, 1672, 1753
BstNI	CCWGG	3 cut(s)	75, 191, 463
BstNSI	RCATGY	1 cut(s)	923
BstSCI	CCNGG	5 cut(s)	73, 189, 338, 339, 461
BstSFI	CTRYAG	3 cut(s)	1057, 1555, 1655
BstSLI	GKGCMC	1 cut(s)	655
BstV1I	GCAGC	1 cut(s)	1420
BstX2I	RGATCY	3 cut(s)	754, 1354, 1728
BstYI	RGATCY	3 cut(s)	754, 1354, 1728
BstZI	CGGCCG	1 cut(s)	419
Bsu36I	CCTNAGG	1 cut(s)	288
BsuI	GTATCC	2 cut(s)	1220, 1579
BsuRI	GGCC	8 cut(s)	212, 260, 421, 588, 786, 1151, 1275, 1613
BtrI	CACGTC	1 cut(s)	969
BtsCI	GGATG	7 cut(s)	131, 477, 574, 819, 1033, 1244, 1471
BtsIMutI	CAGTG	4 cut(s)	15, 1105, 1286, 1606
BveI	ACCTGC	4 cut(s)	634, 682, 1396, 1402
Cac8I	GCNNGC	7 cut(s)	29, 81, 540, 778, 1423, 1519, 1659
CaiI	CAGNNNCTG	1 cut(s)	158
CfoI	GCGC	3 cut(s)	27, 487, 1413
Cfr10I	RCCGGY	2 cut(s)	109, 421
Cfr9I	CCCGGG	1 cut(s)	339
CseI	GACGC	2 cut(s)	111, 1697
Csp6I	GTAC	7 cut(s)	172, 181, 274, 409, 660, 1078, 1498
CviAII	CATG	9 cut(s)	175, 490, 656, 703, 871, 920, 1438, 1479, 1495
CviQI	GTAC	7 cut(s)	172, 181, 274, 409, 660, 1078, 1498
DdeI	CTNAG	7 cut(s)	159, 288, 723, 909, 1197, 1428, 1667
DpnI	GATC	9 cut(s)	495, 548, 582, 698, 756, 1053, 1173, 1356, 1730
DpnII	GATC	9 cut(s)	493, 546, 580, 696, 754, 1051, 1171, 1354, 1728
EaeI	YGGCCR	3 cut(s)	210, 419, 1273
EagI	CGGCCG	1 cut(s)	419
Eam1104I	CTCTTC	3 cut(s)	518, 1374, 1536
EarI	CTCTTC	3 cut(s)	518, 1374, 1536
Ecl136II	GAGCTC	3 cut(s)	11, 295, 1117
EclXI	CGGCCG	1 cut(s)	419
Eco130I	CCWWGG	1 cut(s)	744
Eco24I	GRGCYC	4 cut(s)	13, 297, 1119, 1436
Eco31I	GGTCTC	3 cut(s)	310, 353, 745
Eco47I	GGWCC	6 cut(s)	163, 321, 331, 553, 995, 1624
Eco47III	AGCGCT	2 cut(s)	26, 1412
Eco52I	CGGCCG	1 cut(s)	419
Eco53kI	GAGCTC	3 cut(s)	11, 295, 1117
Eco57I	CTGAAG	1 cut(s)	831
Eco81I	CCTNAGG	1 cut(s)	288
Eco88I	CYCGRG	3 cut(s)	236, 339, 356
EcoICRI	GAGCTC	3 cut(s)	11, 295, 1117
EcoNI	CCTNNNNNAGG	1 cut(s)	613
EcoO109I	RGGNCCY	4 cut(s)	321, 586, 995, 1624
EcoRII	CCWGG	3 cut(s)	73, 189, 461
EcoT14I	CCWWGG	1 cut(s)	744
EcoT38I	GRGCYC	4 cut(s)	13, 297, 1119, 1436
ErhI	CCWWGG	1 cut(s)	744
FaeI	CATG	9 cut(s)	178, 493, 659, 706, 874, 923, 1441, 1482, 1498
FalI	AAGNNNNNCTT	2 cut(s)	1629, 1661
FaqI	GGGAC	4 cut(s)	334, 424, 981, 1610
FatI	CATG	9 cut(s)	174, 489, 655, 702, 870, 919, 1437, 1478, 1494
FauI	CCCGC	2 cut(s)	311, 1526
FbaI	TGATCA	1 cut(s)	696
FblI	GTMKAC	1 cut(s)	1104
Fnu4HI	GCNGC	2 cut(s)	210, 1409
FokI	GGATG	7 cut(s)	118, 484, 581, 806, 1040, 1251, 1478
FriOI	GRGCYC	4 cut(s)	13, 297, 1119, 1436
Fsp4HI	GCNGC	2 cut(s)	210, 1409
GlaI	GCGC	3 cut(s)	26, 486, 1412
GluI	GCNGC	2 cut(s)	210, 1409
GsaI	CCCAGC	2 cut(s)	471, 546
GsuI	CTGGAG	2 cut(s)	334, 1231
HaeII	RGCGCY	3 cut(s)	28, 488, 1414
HaeIII	GGCC	8 cut(s)	212, 260, 421, 588, 786, 1151, 1275, 1613
HapII	CCGG	6 cut(s)	110, 271, 340, 412, 422, 1726
HgaI	GACGC	2 cut(s)	111, 1697
HhaI	GCGC	3 cut(s)	27, 487, 1413
Hin1I	GRCGYC	2 cut(s)	122, 1689
Hin1II	CATG	9 cut(s)	178, 493, 659, 706, 874, 923, 1441, 1482, 1498
Hin6I	GCGC	3 cut(s)	25, 485, 1411
HinP1I	GCGC	3 cut(s)	25, 485, 1411
HincII	GTYRAC	2 cut(s)	832, 1687
HindII	GTYRAC	2 cut(s)	832, 1687
HindIII	AAGCTT	1 cut(s)	1754
HinfI	GANTC	4 cut(s)	48, 415, 1189, 1441
HpaII	CCGG	6 cut(s)	110, 271, 340, 412, 422, 1726
HphI	GGTGA	3 cut(s)	93, 99, 706
Hpy166II	GTNNAC	5 cut(s)	183, 653, 832, 1105, 1687
Hpy188I	TCNGA	6 cut(s)	160, 681, 910, 1222, 1291, 1771
Hpy188III	TCNNGA	9 cut(s)	236, 334, 758, 883, 982, 1072, 1180, 1210, 1458
Hpy8I	GTNNAC	5 cut(s)	183, 653, 832, 1105, 1687
HpyAV	CCTTC	3 cut(s)	235, 250, 1511
HpyCH4III	ACNGT	9 cut(s)	19, 99, 105, 304, 862, 955, 1100, 1281, 1578
HpyCH4IV	ACGT	3 cut(s)	968, 1044, 1589
HpyF10VI	GCNNNNNNNGC	8 cut(s)	119, 128, 850, 1431, 1658, 1663, 1672, 1753
HpyF3I	CTNAG	7 cut(s)	159, 288, 723, 909, 1197, 1428, 1667
HpySE526I	ACGT	3 cut(s)	968, 1044, 1589
Hsp92I	GRCGYC	2 cut(s)	122, 1689
Hsp92II	CATG	9 cut(s)	178, 493, 659, 706, 874, 923, 1441, 1482, 1498
HspAI	GCGC	3 cut(s)	25, 485, 1411
KflI	GGGWCCC	1 cut(s)	321
Ksp22I	TGATCA	1 cut(s)	696
Kzo9I	GATC	9 cut(s)	493, 546, 580, 696, 754, 1051, 1171, 1354, 1728
LmnI	GCTCC	8 cut(s)	36, 292, 300, 315, 370, 619, 841, 1402
Lsp1109I	GCAGC	1 cut(s)	1420
LweI	GCATC	7 cut(s)	140, 146, 152, 158, 164, 1504, 1570
MaeII	ACGT	3 cut(s)	968, 1044, 1589
MaeIII	GTNAC	5 cut(s)	99, 105, 712, 814, 964
MalI	GATC	9 cut(s)	495, 548, 582, 698, 756, 1053, 1173, 1356, 1730
MbiI	CCGCTC	2 cut(s)	318, 1652
MboI	GATC	9 cut(s)	493, 546, 580, 696, 754, 1051, 1171, 1354, 1728
MboII	GAAGA	7 cut(s)	259, 532, 535, 887, 1391, 1553, 1587
MfeI	CAATTG	1 cut(s)	560
MflI	RGATCY	3 cut(s)	754, 1354, 1728
MhlI	GDGCHC	6 cut(s)	13, 297, 655, 855, 1119, 1436
MlsI	TGGCCA	1 cut(s)	1275
MluCI	AATT	7 cut(s)	55, 478, 560, 707, 899, 1251, 1712
MluNI	TGGCCA	1 cut(s)	1275
MlyI	GAGTC	1 cut(s)	1450
MmeI	TCCRAC	2 cut(s)	1200, 1529
Mox20I	TGGCCA	1 cut(s)	1275
MroXI	GAANNNNTTC	1 cut(s)	1035
MscI	TGGCCA	1 cut(s)	1275
MseI	TTAA	1 cut(s)	576
MslI	CAYNNNNRTG	3 cut(s)	1047, 1493, 1579
Msp20I	TGGCCA	1 cut(s)	1275
MspA1I	CMGCKG	1 cut(s)	1307
MspI	CCGG	6 cut(s)	110, 271, 340, 412, 422, 1726
MspR9I	CCNGG	5 cut(s)	75, 191, 340, 341, 463
MunI	CAATTG	1 cut(s)	560
Mva1269I	GAATGC	1 cut(s)	1070
MvaI	CCWGG	3 cut(s)	75, 191, 463
MwoI	GCNNNNNNNGC	8 cut(s)	119, 128, 850, 1431, 1658, 1663, 1672, 1753
NciI	CCSGG	2 cut(s)	340, 341
NdeII	GATC	9 cut(s)	493, 546, 580, 696, 754, 1051, 1171, 1354, 1728
NlaIII	CATG	9 cut(s)	178, 493, 659, 706, 874, 923, 1441, 1482, 1498
NlaIV	GGNNCC	8 cut(s)	114, 322, 323, 554, 997, 1312, 1626, 1730
NmeAIII	GCCGAG	1 cut(s)	768
NmuCI	GTSAC	4 cut(s)	99, 105, 712, 964
NspI	RCATGY	1 cut(s)	923
OliI	CACNNNNGTG	2 cut(s)	1047, 1579
PaqCI	CACCTGC	2 cut(s)	682, 1402
PasI	CCCWGGG	1 cut(s)	74
PciI	ACATGT	1 cut(s)	919
PctI	GAATGC	1 cut(s)	1070
PdmI	GAANNNNTTC	1 cut(s)	1035
PfeI	GAWTC	3 cut(s)	48, 415, 1189
PflMI	CCANNNNNTGG	1 cut(s)	562
PkrI	GCNGC	2 cut(s)	211, 1410
PleI	GAGTC	1 cut(s)	1449
PpsI	GAGTC	1 cut(s)	1449
PpuMI	RGGWCCY	3 cut(s)	321, 995, 1624
PscI	ACATGT	1 cut(s)	919
Psp124BI	GAGCTC	3 cut(s)	13, 297, 1119
Psp5II	RGGWCCY	3 cut(s)	321, 995, 1624
Psp6I	CCWGG	3 cut(s)	73, 189, 461
PspFI	CCCAGC	2 cut(s)	467, 542
PspGI	CCWGG	3 cut(s)	73, 189, 461
PspN4I	GGNNCC	8 cut(s)	114, 322, 323, 554, 997, 1312, 1626, 1730
PspPPI	RGGWCCY	3 cut(s)	321, 995, 1624
PstI	CTGCAG	1 cut(s)	1659
PstNI	CAGNNNCTG	1 cut(s)	158
PsuI	RGATCY	3 cut(s)	754, 1354, 1728
PvuII	CAGCTG	1 cut(s)	1307
RsaI	GTAC	7 cut(s)	173, 182, 275, 410, 661, 1079, 1499
RsaNI	GTAC	7 cut(s)	172, 181, 274, 409, 660, 1078, 1498
RseI	CAYNNNNRTG	3 cut(s)	1047, 1493, 1579
SacI	GAGCTC	3 cut(s)	13, 297, 1119
SaqAI	TTAA	1 cut(s)	576
SatI	GCNGC	2 cut(s)	210, 1409
Sau3AI	GATC	9 cut(s)	493, 546, 580, 696, 754, 1051, 1171, 1354, 1728
SchI	GAGTC	1 cut(s)	1450
ScrFI	CCNGG	5 cut(s)	75, 191, 340, 341, 463
SduI	GDGCHC	6 cut(s)	13, 297, 655, 855, 1119, 1436
SfaNI	GCATC	7 cut(s)	140, 146, 152, 158, 164, 1504, 1570
SfcI	CTRYAG	3 cut(s)	1057, 1555, 1655
SinI	GGWCC	6 cut(s)	163, 321, 331, 553, 995, 1624
SmaI	CCCGGG	1 cut(s)	341
SmiMI	CAYNNNNRTG	3 cut(s)	1047, 1493, 1579
SmlI	CTYRAG	4 cut(s)	365, 374, 1070, 1456
SmoI	CTYRAG	4 cut(s)	365, 374, 1070, 1456
Sse9I	AATT	7 cut(s)	55, 478, 560, 707, 899, 1251, 1712
SsiI	CCGC	9 cut(s)	129, 135, 166, 204, 209, 318, 792, 1519, 1650
SstI	GAGCTC	3 cut(s)	13, 297, 1119
StyD4I	CCNGG	5 cut(s)	73, 189, 338, 339, 461
StyI	CCWWGG	1 cut(s)	744
TaaI	ACNGT	9 cut(s)	19, 99, 105, 304, 862, 955, 1100, 1281, 1578
TaiI	ACGT	3 cut(s)	971, 1047, 1592
TaqI	TCGA	1 cut(s)	983
TasI	AATT	7 cut(s)	55, 478, 560, 707, 899, 1251, 1712
TatI	WGTACW	2 cut(s)	171, 1077
TauI	GCSGC	1 cut(s)	212
TfiI	GAWTC	3 cut(s)	48, 415, 1189
Tru1I	TTAA	1 cut(s)	576
Tru9I	TTAA	1 cut(s)	576
TscAI	CASTG	4 cut(s)	22, 1105, 1286, 1613
TseFI	GTSAC	4 cut(s)	99, 105, 712, 964
TseI	GCWGC	1 cut(s)	1408
Tsp45I	GTSAC	4 cut(s)	99, 105, 712, 964
TspDTI	ATGAA	6 cut(s)	719, 1044, 1263, 1346, 1467, 1617
TspGWI	ACGGA	3 cut(s)	1040, 1553, 1724
TspMI	CCCGGG	1 cut(s)	339
TspRI	CASTG	4 cut(s)	22, 1105, 1286, 1613
Van91I	CCANNNNNTGG	1 cut(s)	562
VneI	GTGCAC	1 cut(s)	651
VpaK11BI	GGWCC	6 cut(s)	163, 321, 331, 553, 995, 1624
XagI	CCTNNNNNAGG	1 cut(s)	613
XapI	RAATTY	1 cut(s)	1251
XceI	RCATGY	1 cut(s)	923
XcmI	CCANNNNNNNNNTGG	1 cut(s)	469
XmaI	CCCGGG	1 cut(s)	339
XmiI	GTMKAC	1 cut(s)	1104
XmnI	GAANNNNTTC	1 cut(s)	1035

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.