Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002937

Physical Location & Seq

Genomic Coordinates Reverse (-)

55360266 .. 55363974

Gene Structure 3709 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019681

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2544 bp

ATGAGTGTGGTGGGATTTGATTTTGGCAATGAGAGCGGCATTGTGGCCGTGGCAAGGCAGAGGGGTATTGATGTCGTGCTCAATGACGAGTCCAAACGTGAAACTCCTGCCATTGTTTGTTTTGGGGAAAAGCAGCGGTTCATTGGGACCGCAGGCGCTGCTTCGTCTATGATGAACCCGAAGAACACGATTTCGCAGATCAAACGCTTGGTTGGAAAGAAATTCTCGGATCCCGTGTTGCAGAGGGATATTAAGTCCCTGCCTTTTGCTGTTACTGAAGGGCCTGATGGATATCCGTTGATCCATGCCCGTTATTTGGGAGAATCCAAGACATTCACGCCCACCCAAGTTTTGGGAATGGTGTTCTCTGATCTGAAAATCATAGCTCAGAAGAATCTTAATGCAGCAGTTGTAGACTGCTGTATAGGAATTCCGGTTTATTTCACTGATCTCCAAAGAAGAGCTGTTGAGGATGCAGCCAGAATTGCTGGCTTGAACCCTCTTAGGTTGTTTCATGAAACTACAGCAACTGCTTTAGCTTATGGAATCTACAAGACAGATTTACCAGAGAATGACCAATTGAATGTTGCCTTTGTTGATATTGGGCATGCTAGCATGCAAGTTTGCATTGCTGGCTTCAAGAAGGGGCAGCTGAAAGTTCTAGCTCATTCATTTGACCTGTCTTTGGGTGGTAGGGATTTTGATGAAGTACTGTTCCAGCACTTTGCGGCAAAATTTAAGGAAGAGTACAAGATAGATGTTTACCAGAATGCAAGGGCCTGCCTTCGGCTTCGAGCTGCTTGTGAGAAGCTGAAGAAGGTGCTTAGTGCAAATCCTGAGGCACCTTTGAATATTGAGTGCTTAATGGACGAGAAAGATGTTAGAGGTTTTATTAAGCGGGATGAATTTGAGCAAATTAGTGCTCCTATTTTGGAACGCGTAAAGGTACCTTTGGAGAAGGCCCTTCTCGATGCAGATCTTTCAATAGAGAATGTTCATACTGTTGAGGTTGTTGGTTCAGGCTCTCGTGTACCTGCTATAATCAAGATATTGACAGAGTTCTTCAAAAAGGAGCCTAGGAGAACTATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCTCTGCAGTGTGCAATGCTTAGTCCTACATTTAAAGTCCGAGAGTTTCAGGTGAATGAGAGCTTCCCATTCTCGATTGCTTTATCCTGGAAAGGTTCTGGTCCAGATGCCCAGAATGGAGGAGCGGATCAAACTACTATTGTCTTTCCCAAGGGAAATCCCATTCCAAGTTTCAAGGCTCTTACATTTTACAGATCTGGCACGTTTACAGTTGATGTGCAGTATACCGATGTTGGTGATTTGCAGGCACCTGTAAAGATCAGTACATATACGATTGGTCCTTTCCAATCTAATAAAAGTGAGAGGGCGAAGGTGAAGGTCAAAGTTCGCTTGAATTTACATGGGATCGTATCTGTAGATTCAGCAACTCTTTTGGAAGAGGAAGAAGTTGAGGTTCCTGTCACAAAAGAGGAACCAAAGGAGGCCACTAAGATGGAGACTGATGAGGCACCCAGTGATGCACCTCCCCCAAGTTCTGAGGGGAATGATGTGAACATGCAAGATGCTAAGAGCACTGATGCTCCAAGTGCTGAGAATGGTGTCCCCGAGTCTGGCGACAAGCCTGTGCAGATGGAAACAGATGCCAAGGCTGATGCTCCTAAAAGAAAGGTTAAGAAAACAAGCATTCCTGTGGTAGAGTTAGTTTATGGAGGAATGACTCCAGCAGATGTGCAGAAGGCAATGGAAAGTGAGTATGAGATGGCTTTACAAGATCGTGTTATGGAAGAAACAAAAGACAAGAAAAATGCTGTTGAGGCATATGTTTATGATATGAGAAACAAGCTGAGTGACAAGTACCAGGAATTTGTCACCGACTCGGAGAGGGAATCATTTATCACCAAACTTCAGGAGACGGAAGACTGGCTATATGAAGATGGTGAGGACGAAACCAAAGGTGTTTATATTGCCAAGCTTGAGGAGCTTAAGAAGCAAGGTGATGCCATTGAAGAGCGATACAAGGAGCATACAGAGAGGGGATCTGTCATTGACCAACTAGGTTACTGTGTTAACAGTTACAGAGAAGCTGCAGTATCAGCTGATCCAAAATTCGATCACATCGATGTTGCTGACAAACAAAAGGTCTTAAATGAGTGTGTTGAAGCTGAGGCCTGGTTAAGAGAGAAAAAGCAGCAACAGGATTCACTGCCAAAACATGCTACTCCAGTACTCTTGTCAGCTGATGTGAAGAGGAAGACTGAAGCACTTGATAGGTTCTGTAGACCAATAATGACAAAACCAAAACCGGCACCAGCCAAACCAGCTACTCCTGAACCACAACCAAGCCCATCTCCTCAGGAGAGCGATCAACCCCAGAGTGGTGAAGGCCATGCCAATCCCAACTCCAATGAGAATCCTGCTGCTGGTGACAATGAGGTTCCAGCTGAACCAATGGAAACAGACAAGTCAGAAGCTCCCCAGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0008144 GO:0008150 GO:0009266 GO:0009408 GO:0009506 GO:0009628 GO:0010035 GO:0010038 GO:0016020 GO:0017076 GO:0030054 GO:0030312 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0055044 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04530 ko04612 map04530 map04612

Pfam Domains

Protein Families

HSP70 MreB_Mbl

Protein Analysis

848

Amino Acids

93.61

Weight (kDa)

5.14

Isoelectric Point (pI)

42.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	3 - 692	3.3e-157	Hsp70 protein
MreB_Mbl	PF06723	136 - 375	1.1e-06	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79920 AT1G79920 AT1G79920 AT1G79920 AT1G79930 AT1G79930
fragaria_vesca	FvH4_6g31170 FvH4_6g31170 FvH4_6g31170 FvH4_6g31170
malus_domestica	MD09G1212600.v1.1 MD09G1213000.v1.1 MD09G1213700.v1.1
prunus_persica	Prupe.3G071300_v2.0.a1 Prupe.3G071300_v2.0.a1 Prupe.3G071300_v2.0.a1
pyrus_communis	pycom09g13020 pycom17g20100
rosa_chinensis	RchiOBHm_Chr2g0137851 RchiOBHm_Chr2g0137861
rosa_laevigata	RLG00000019681 RLG00000019684
rosa_multiflora	Rmu_sc0002170.1_g000008 Rmu_sc0002170.1_g000011 Rmu_sc0007548.1_g000005
rosa_roxburghii	Rroxscaffold_2G00106730 Rroxscaffold_2G00106760
rosa_rugosa	Rorug02G0347100 Rorug02G0347100 Rorug02G0347200 Rorug02G0347300
rosa_samantha	Rh2AG393500 Rh2AG393700 Rh2BG401000 Rh2CG380200 Rh2CG380400 Rh2DG416000
rosa_wichuraiana	Rw2G032230

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1042
Acc65I	GGTACC	1 cut(s)	946
AccB1I	GGYRCC	5 cut(s)	841, 946, 1366, 1567, 2365
AccB7I	CCANNNNNTGG	1 cut(s)	352
AccBSI	CCGCTC	2 cut(s)	36, 1244
AccI	GTMKAC	3 cut(s)	414, 1343, 2338
AccII	CGCG	1 cut(s)	939
AciI	CCGC	6 cut(s)	36, 136, 150, 728, 898, 1244
AclWI	GGATC	7 cut(s)	224, 237, 295, 1254, 1472, 2104, 2153
AcoI	YGGCCR	1 cut(s)	45
AcsI	RAATTY	7 cut(s)	221, 429, 734, 905, 1453, 1922, 2165
AcuI	CTGAAG	4 cut(s)	297, 833, 1949, 2337
AdeI	CACNNNGTG	1 cut(s)	1574
AfaI	GTAC	7 cut(s)	711, 749, 948, 1032, 1384, 1916, 2286
AfiI	CCNNNNNNNGG	8 cut(s)	54, 316, 352, 685, 786, 1670, 2435, 2480
AflII	CTTAAG	1 cut(s)	2042
AflIII	ACRYGT	1 cut(s)	937
AjnI	CCWGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
Alw21I	GWGCWC	4 cut(s)	81, 925, 1123, 1634
Alw26I	GTCTC	2 cut(s)	1550, 1964
AlwI	GGATC	7 cut(s)	224, 237, 295, 1254, 1472, 2104, 2153
AlwNI	CAGNNNCTG	2 cut(s)	158, 530
Ama87I	CYCGRG	1 cut(s)	1664
AoxI	GGCC	8 cut(s)	45, 281, 777, 960, 1542, 2226, 2443, 2538
ApeKI	GCWGC	9 cut(s)	133, 158, 404, 476, 649, 797, 2144, 2248, 2477
ApoI	RAATTY	7 cut(s)	221, 429, 734, 905, 1453, 1922, 2165
ArsI	GACNNNNNNTTYG	2 cut(s)	2184, 2216
Asp718I	GGTACC	1 cut(s)	946
AspA2I	CCTAGG	1 cut(s)	1076
AspLEI	GCGC	1 cut(s)	158
AspS9I	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
AsuHPI	GGTGA	9 cut(s)	1183, 1367, 1444, 1921, 1948, 2009, 2066, 2450, 2495
AsuNHI	GCTAGC	1 cut(s)	611
AvaI	CYCGRG	1 cut(s)	1664
AvaII	GGWCC	3 cut(s)	147, 1220, 1397
AvrII	CCTAGG	1 cut(s)	1076
AxyI	CCTNAGG	2 cut(s)	837, 2412
BamHI	GGATCC	1 cut(s)	229
BanI	GGYRCC	5 cut(s)	841, 946, 1366, 1567, 2365
BauI	CACGAG	1 cut(s)	1026
BbsI	GAAGAC	2 cut(s)	1983, 2318
Bbv12I	GWGCWC	4 cut(s)	81, 925, 1123, 1634
BbvCI	CCTCAGC	1 cut(s)	2223
BbvI	GCAGC	9 cut(s)	145, 145, 416, 488, 661, 784, 2131, 2260, 2464
BccI	CCATC	6 cut(s)	281, 1546, 1684, 1813, 1988, 2413
BceAI	ACGGC	1 cut(s)	32
BciT130I	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
BcoDI	GTCTC	2 cut(s)	1550, 1964
BfaI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
BfmI	CTRYAG	5 cut(s)	522, 1124, 1473, 2145, 2335
BfoI	RGCGCY	1 cut(s)	159
BfrI	CTTAAG	1 cut(s)	2042
BfuAI	ACCTGC	1 cut(s)	1042
BglII	AGATCT	2 cut(s)	976, 1313
BlnI	CCTAGG	1 cut(s)	1076
BmcAI	AGTACT	2 cut(s)	711, 2286
Bme1390I	CCNGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
Bme18I	GGWCC	3 cut(s)	147, 1220, 1397
BmeT110I	CYCGRG	1 cut(s)	1664
BmgT120I	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
BmrFI	CCNGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
BmrI	ACTGGG	1 cut(s)	1566
BmsI	GCATC	9 cut(s)	463, 961, 1216, 1567, 1612, 1627, 1690, 1702, 2047
BmtI	GCTAGC	1 cut(s)	615
BmuI	ACTGGG	1 cut(s)	1566
BpiI	GAAGAC	2 cut(s)	1983, 2318
BpmI	CTGGAG	2 cut(s)	1764, 2265
Bpu10I	CCTNAGC	1 cut(s)	2223
BpuEI	CTTGAG	1 cut(s)	2054
Bsa29I	ATCGAT	1 cut(s)	2178
BsaBI	GATNNNNATC	2 cut(s)	291, 975
BsaJI	CCNNGG	6 cut(s)	48, 1076, 1110, 1269, 1704, 2535
BsaWI	WCCGGW	1 cut(s)	433
BsaXI	ACNNNNNCTCC	2 cut(s)	1624, 1654
Bsc4I	CCNNNNNNNGG	8 cut(s)	54, 316, 352, 685, 786, 1670, 2435, 2480
Bse118I	RCCGGY	1 cut(s)	2362
Bse1I	ACTGG	3 cut(s)	1572, 1985, 2282
Bse21I	CCTNAGG	2 cut(s)	837, 2412
Bse3DI	GCAATG	4 cut(s)	34, 627, 1140, 1806
Bse8I	GATNNNNATC	2 cut(s)	291, 975
BseBI	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
BseCI	ATCGAT	1 cut(s)	2178
BseDI	CCNNGG	6 cut(s)	48, 1076, 1110, 1269, 1704, 2535
BseGI	GGATG	2 cut(s)	478, 907
BseJI	GATNNNNATC	2 cut(s)	291, 975
BseLI	CCNNNNNNNGG	8 cut(s)	54, 316, 352, 685, 786, 1670, 2435, 2480
BseMI	GCAATG	4 cut(s)	34, 627, 1140, 1806
BseMII	CTCAG	7 cut(s)	401, 828, 1587, 1641, 1895, 2214, 2426
BseNI	ACTGG	3 cut(s)	1572, 1985, 2282
BseRI	GAGGAG	3 cut(s)	1254, 2051, 2400
BseXI	GCAGC	9 cut(s)	145, 145, 416, 488, 661, 784, 2131, 2260, 2464
BsgI	GTGCAG	3 cut(s)	1358, 1706, 1811
Bsh1236I	CGCG	1 cut(s)	939
BshFI	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
BshNI	GGYRCC	5 cut(s)	841, 946, 1366, 1567, 2365
BshVI	ATCGAT	1 cut(s)	2178
BsiHKAI	GWGCWC	4 cut(s)	81, 925, 1123, 1634
BsiHKCI	CYCGRG	1 cut(s)	1664
BsiSI	CCGG	2 cut(s)	434, 2363
BslFI	GGGAC	3 cut(s)	160, 241, 1646
BslI	CCNNNNNNNGG	8 cut(s)	54, 316, 352, 685, 786, 1670, 2435, 2480
BsmAI	GTCTC	2 cut(s)	1550, 1964
BsmBI	CGTCTC	1 cut(s)	1964
BsmFI	GGGAC	3 cut(s)	160, 241, 1646
BsmI	GAATGC	3 cut(s)	775, 1096, 1743
BsnI	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
BsoBI	CYCGRG	1 cut(s)	1664
Bsp1286I	GDGCHC	4 cut(s)	81, 925, 1123, 1634
BspACI	CCGC	6 cut(s)	36, 136, 150, 728, 898, 1244
BspANI	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
BspCNI	CTCAG	7 cut(s)	400, 829, 1588, 1642, 1896, 2215, 2425
BspDI	ATCGAT	1 cut(s)	2178
BspFNI	CGCG	1 cut(s)	939
BspHI	TCATGA	1 cut(s)	514
BspMAI	CTGCAG	2 cut(s)	1128, 2149
BspMI	ACCTGC	1 cut(s)	1042
BspOI	GCTAGC	1 cut(s)	615
BspPI	GGATC	7 cut(s)	224, 237, 295, 1254, 1472, 2104, 2153
BspQI	GCTCTTC	2 cut(s)	454, 2061
BspT107I	GGYRCC	5 cut(s)	841, 946, 1366, 1567, 2365
BspTI	CTTAAG	1 cut(s)	2042
BsrBI	CCGCTC	2 cut(s)	36, 1244
BsrDI	GCAATG	4 cut(s)	34, 627, 1140, 1806
BsrFI	RCCGGY	1 cut(s)	2362
BsrI	ACTGG	3 cut(s)	1572, 1985, 2282
BssAI	RCCGGY	1 cut(s)	2362
BssECI	CCNNGG	6 cut(s)	48, 1076, 1110, 1269, 1704, 2535
BssNAI	GTATAC	1 cut(s)	1344
BssSI	CACGAG	1 cut(s)	1026
BssT1I	CCWWGG	3 cut(s)	1076, 1269, 1704
Bst1107I	GTATAC	1 cut(s)	1344
Bst2BI	CACGAG	1 cut(s)	1026
Bst2UI	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
Bst4CI	ACNGT	5 cut(s)	714, 1003, 1330, 2123, 2132
Bst6I	CTCTTC	5 cut(s)	454, 738, 1491, 2061, 2300
BstAFI	CTTAAG	1 cut(s)	2042
BstAPI	GCANNNNNTGC	1 cut(s)	158
BstC8I	GCNNGC	8 cut(s)	154, 490, 609, 613, 617, 634, 781, 1365
BstDSI	CCRYGG	1 cut(s)	48
BstF5I	GGATG	2 cut(s)	478, 907
BstFNI	CGCG	1 cut(s)	939
BstH2I	RGCGCY	1 cut(s)	159
BstHHI	GCGC	1 cut(s)	158
BstMAI	GTCTC	2 cut(s)	1550, 1964
BstNI	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
BstNSI	RCATGY	4 cut(s)	611, 619, 1618, 2276
BstSCI	CCNGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
BstSFI	CTRYAG	5 cut(s)	522, 1124, 1473, 2145, 2335
BstUI	CGCG	1 cut(s)	939
BstV1I	GCAGC	9 cut(s)	145, 145, 416, 488, 661, 784, 2131, 2260, 2464
BstV2I	GAAGAC	2 cut(s)	1983, 2318
BstX2I	RGATCY	4 cut(s)	229, 976, 1313, 2096
BstXI	CCANNNNNNTGG	1 cut(s)	1552
BstYI	RGATCY	4 cut(s)	229, 976, 1313, 2096
BstZ17I	GTATAC	1 cut(s)	1344
Bsu15I	ATCGAT	1 cut(s)	2178
Bsu36I	CCTNAGG	2 cut(s)	837, 2412
BsuRI	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
BsuTUI	ATCGAT	1 cut(s)	2178
BtgI	CCRYGG	1 cut(s)	48
BtsCI	GGATG	2 cut(s)	478, 907
BtsI	GCAGTG	2 cut(s)	1133, 2261
BtsIMutI	CAGTG	5 cut(s)	444, 1133, 1579, 1632, 2261
BveI	ACCTGC	1 cut(s)	1042
Cac8I	GCNNGC	8 cut(s)	154, 490, 609, 613, 617, 634, 781, 1365
CaiI	CAGNNNCTG	2 cut(s)	158, 530
CciI	TCATGA	1 cut(s)	514
CfoI	GCGC	1 cut(s)	158
Cfr10I	RCCGGY	1 cut(s)	2362
Cfr13I	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
ClaI	ATCGAT	1 cut(s)	2178
Csp6I	GTAC	7 cut(s)	710, 748, 947, 1031, 1383, 1915, 2285
CviAII	CATG	8 cut(s)	305, 515, 608, 616, 1460, 1615, 2273, 2447
CviQI	GTAC	7 cut(s)	710, 748, 947, 1031, 1383, 1915, 2285
DraI	TTTAAA	1 cut(s)	1153
DraIII	CACNNNGTG	1 cut(s)	1574
EaeI	YGGCCR	1 cut(s)	45
Eam1104I	CTCTTC	5 cut(s)	454, 738, 1491, 2061, 2300
EarI	CTCTTC	5 cut(s)	454, 738, 1491, 2061, 2300
Eco130I	CCWWGG	3 cut(s)	1076, 1269, 1704
Eco147I	AGGCCT	2 cut(s)	2228, 2540
Eco32I	GATATC	1 cut(s)	293
Eco47I	GGWCC	3 cut(s)	147, 1220, 1397
Eco57I	CTGAAG	4 cut(s)	297, 833, 1949, 2337
Eco81I	CCTNAGG	2 cut(s)	837, 2412
Eco88I	CYCGRG	1 cut(s)	1664
EcoO109I	RGGNCCY	3 cut(s)	281, 777, 961
EcoRI	GAATTC	1 cut(s)	429
EcoRII	CCWGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
EcoRV	GATATC	1 cut(s)	293
EcoT14I	CCWWGG	3 cut(s)	1076, 1269, 1704
ErhI	CCWWGG	3 cut(s)	1076, 1269, 1704
Esp3I	CGTCTC	1 cut(s)	1964
FaeI	CATG	8 cut(s)	308, 518, 611, 619, 1463, 1618, 2276, 2450
FaqI	GGGAC	3 cut(s)	160, 241, 1646
FatI	CATG	8 cut(s)	304, 514, 607, 615, 1459, 1614, 2272, 2446
FauI	CCCGC	1 cut(s)	891
FauNDI	CATATG	1 cut(s)	1879
FblI	GTMKAC	3 cut(s)	414, 1343, 2338
FokI	GGATG	2 cut(s)	485, 914
FspBI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
GlaI	GCGC	1 cut(s)	157
GsuI	CTGGAG	2 cut(s)	1764, 2265
HaeII	RGCGCY	1 cut(s)	159
HaeIII	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
HapII	CCGG	2 cut(s)	434, 2363
HhaI	GCGC	1 cut(s)	158
Hin1II	CATG	8 cut(s)	308, 518, 611, 619, 1463, 1618, 2276, 2450
Hin6I	GCGC	1 cut(s)	156
HinP1I	GCGC	1 cut(s)	156
HincII	GTYRAC	1 cut(s)	2128
HindII	GTYRAC	1 cut(s)	2128
HindIII	AAGCTT	1 cut(s)	2030
HpaI	GTTAAC	1 cut(s)	2128
HpaII	CCGG	2 cut(s)	434, 2363
HphI	GGTGA	9 cut(s)	1183, 1367, 1444, 1921, 1948, 2009, 2066, 2450, 2495
Hpy166II	GTNNAC	8 cut(s)	415, 763, 1031, 1326, 1344, 1612, 2128, 2339
Hpy188I	TCNGA	8 cut(s)	229, 370, 375, 390, 1160, 1597, 1939, 2527
Hpy8I	GTNNAC	8 cut(s)	415, 763, 1031, 1326, 1344, 1612, 2128, 2339
HpyCH4III	ACNGT	5 cut(s)	714, 1003, 1330, 2123, 2132
HpyCH4IV	ACGT	2 cut(s)	97, 1322
HpySE526I	ACGT	2 cut(s)	97, 1322
Hsp92II	CATG	8 cut(s)	308, 518, 611, 619, 1463, 1618, 2276, 2450
HspAI	GCGC	1 cut(s)	156
KpnI	GGTACC	1 cut(s)	950
KspAI	GTTAAC	1 cut(s)	2128
LguI	GCTCTTC	2 cut(s)	454, 2061
LmnI	GCTCC	8 cut(s)	928, 1072, 1241, 1645, 1720, 2038, 2080, 2536
Lsp1109I	GCAGC	9 cut(s)	145, 145, 416, 488, 661, 784, 2131, 2260, 2464
LweI	GCATC	9 cut(s)	463, 961, 1216, 1567, 1612, 1627, 1690, 1702, 2047
MaeI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
MaeII	ACGT	2 cut(s)	97, 1322
MaeIII	GTNAC	7 cut(s)	271, 1519, 1907, 1927, 2117, 2132, 2483
MbiI	CCGCTC	2 cut(s)	36, 1244
MfeI	CAATTG	1 cut(s)	578
MflI	RGATCY	4 cut(s)	229, 976, 1313, 2096
MhlI	GDGCHC	4 cut(s)	81, 925, 1123, 1634
MluI	ACGCGT	1 cut(s)	937
MlyI	GAGTC	4 cut(s)	98, 1676, 1771, 1928
MmeI	TCCRAC	1 cut(s)	193
MslI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
MspA1I	CMGCKG	5 cut(s)	136, 652, 2156, 2297, 2501
MspCI	CTTAAG	1 cut(s)	2042
MspI	CCGG	2 cut(s)	434, 2363
MspR9I	CCNGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
MunI	CAATTG	1 cut(s)	578
Mva1269I	GAATGC	3 cut(s)	775, 1096, 1743
MvaI	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
MvnI	CGCG	1 cut(s)	939
NdeI	CATATG	1 cut(s)	1879
NheI	GCTAGC	1 cut(s)	611
NlaIII	CATG	8 cut(s)	308, 518, 611, 619, 1463, 1618, 2276, 2450
NmuCI	GTSAC	4 cut(s)	1519, 1907, 1927, 2483
NspI	RCATGY	4 cut(s)	611, 619, 1618, 2276
PaeI	GCATGC	2 cut(s)	611, 619
PagI	TCATGA	1 cut(s)	514
PceI	AGGCCT	2 cut(s)	2228, 2540
PciSI	GCTCTTC	2 cut(s)	454, 2061
PcsI	WCGNNNNNNNCGW	1 cut(s)	2175
PctI	GAATGC	3 cut(s)	775, 1096, 1743
PfeI	GAWTC	7 cut(s)	323, 394, 546, 1478, 1946, 2258, 2470
PflMI	CCANNNNNTGG	1 cut(s)	352
PfoI	TCCNGGA	1 cut(s)	1205
PleI	GAGTC	4 cut(s)	97, 1675, 1771, 1928
PpsI	GAGTC	4 cut(s)	97, 1675, 1771, 1928
Psp6I	CCWGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
PspGI	CCWGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
PspPI	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
PstI	CTGCAG	2 cut(s)	1128, 2149
PstNI	CAGNNNCTG	2 cut(s)	158, 530
PsuI	RGATCY	4 cut(s)	229, 976, 1313, 2096
PvuII	CAGCTG	4 cut(s)	652, 2156, 2297, 2501
RsaI	GTAC	7 cut(s)	711, 749, 948, 1032, 1384, 1916, 2286
RsaNI	GTAC	7 cut(s)	710, 748, 947, 1031, 1383, 1915, 2285
RseI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
SapI	GCTCTTC	2 cut(s)	454, 2061
Sau96I	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
ScaI	AGTACT	2 cut(s)	711, 2286
SchI	GAGTC	4 cut(s)	98, 1676, 1771, 1928
ScrFI	CCNGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
SduI	GDGCHC	4 cut(s)	81, 925, 1123, 1634
SfaNI	GCATC	9 cut(s)	463, 961, 1216, 1567, 1612, 1627, 1690, 1702, 2047
SfcI	CTRYAG	5 cut(s)	522, 1124, 1473, 2145, 2335
SinI	GGWCC	3 cut(s)	147, 1220, 1397
SmiMI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
SmlI	CTYRAG	2 cut(s)	2033, 2042
SmoI	CTYRAG	2 cut(s)	2033, 2042
SphI	GCATGC	2 cut(s)	611, 619
SseBI	AGGCCT	2 cut(s)	2228, 2540
SsiI	CCGC	6 cut(s)	36, 136, 150, 728, 898, 1244
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
StuI	AGGCCT	2 cut(s)	2228, 2540
StyD4I	CCNGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
StyI	CCWWGG	3 cut(s)	1076, 1269, 1704
TaaI	ACNGT	5 cut(s)	714, 1003, 1330, 2123, 2132
TaiI	ACGT	2 cut(s)	100, 1325
TaqI	TCGA	5 cut(s)	793, 969, 1193, 2169, 2178
TatI	WGTACW	4 cut(s)	709, 747, 1382, 2284
TauI	GCSGC	2 cut(s)	39, 731
TfiI	GAWTC	7 cut(s)	323, 394, 546, 1478, 1946, 2258, 2470
TscAI	CASTG	5 cut(s)	451, 1133, 1579, 1639, 2268
TseFI	GTSAC	4 cut(s)	1519, 1907, 1927, 2483
TseI	GCWGC	9 cut(s)	133, 158, 404, 476, 649, 797, 2144, 2248, 2477
Tsp45I	GTSAC	4 cut(s)	1519, 1907, 1927, 2483
TspGWI	ACGGA	2 cut(s)	285, 1988
TspRI	CASTG	5 cut(s)	451, 1133, 1579, 1639, 2268
Van91I	CCANNNNNTGG	1 cut(s)	352
Vha464I	CTTAAG	1 cut(s)	2042
VpaK11BI	GGWCC	3 cut(s)	147, 1220, 1397
XapI	RAATTY	7 cut(s)	221, 429, 734, 905, 1453, 1922, 2165
XceI	RCATGY	4 cut(s)	611, 619, 1618, 2276
XcmI	CCANNNNNNNNNTGG	1 cut(s)	349
XmaJI	CCTAGG	1 cut(s)	1076
XmiI	GTMKAC	3 cut(s)	414, 1343, 2338
XspI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
ZrmI	AGTACT	2 cut(s)	711, 2286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.