RLG00000019684
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
55382877 .. 55384856
1980 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019684

Sequence Viewer

Length: 1668 bp
ATGAGCGTGGTGGGATTTGATTTTGGCAATGAGAGTGGCATTGTGGCCATGGCAAGGCAGAGCGGTATTGATGTTGCGCTCAATGAAGAGTCCAAACGCGAAACTCCTGCCATTGTTTGTTTCGGGGATAAGCAGCGGTTCATTGGGACCGCAGGCGCTGCTTCGTCTATGATGAACCCGAAGAACACGATTTCGCAGATCAAACGCTTGGTTGGAAAGAAATTCTCGGATCCTGTGTTGCAGAGGGATATCAAGTCCCTGCCTTTCGCTGTTACTGAAGGGCCTGATGGATATCCGTTGATCCATGCCCGTTATTTGGGAGAAGCCAAGACATTCACGCCCACCCAAGTTTTAGGAATGGTGTTCTCTGATCTGAAAATCATAGCTCAGAAGAATCTTAATGCAGCAGTTGTAGACTGCTGTATAGGAATTCCGGTTTATTTCACTGATCTCCAAAGAAGAGCTGTTGAGGATGCAGCCAGAATTGCTGGGTTGAACCCTCTTAGGTTGTTTCATGAAACTACAGCAACTGCTTTAGCTTATGGAATCTACAAGACAGATTTACCAGAGAACGAGCAATTGAATGTTGCCTTTGTTGATATTGGGCATGCTAGCATGCAAGTTTGCATTGCTGGCTTCAAGAAGGGGCAGCTGAAAGTTCTAGCTCATTCATTTGACCTGTCTTTGGGTGGTAGGGATTTTGATGAAGTACTGTTCCAGCACTTTGCGGCAAAATTTAAGGAAGAGTACAAGATAGATGTTTACCAGAATGGAAGGGCCTGCCTTCGGCTTCGAGCTGCTTGTGAGAAGCTGAAGAAGGTGCTTAGTGCAAATCCTGAGGCAACTTTGAATATTCAGTGCTTAATGGACGAGAAAGATGTTAGAGGTTTTATTAAGCGGGATGAATTTGAACAAATTAGTGCTCCTATTTTGGAACGCGTAAAGGTACCTTTGGAGAAGGCCCTTCTCGATGCAAATCTTTCAATAGACAACGTTCATACTGTTGAGGTTGTTGGTTCAGGCTTTCGTGTACCTGCTATAATCAAGATATTGATAGAGTTCTTCAAAAAGGAGCCTAGGAGAACTATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCTCTGCAGTGTGCAATGCTTAGTCCTACATTCAAAGTCCGAGAGTTTCAGGTGAATGAGAGCTTCCCATTCTCGATTGCTTTATCCTGGAAAGGTTCCGGTCCAGATGCCCAGAATGGAGGAGCGGATCAAACTATTATCGCCTTTCCCAAGGGAAATCCCATTCCAAGTTTCAAGGCTCTTACATTTTACAGATCTGGCACGTTTTCAGTTGATGTGCAGTATATCGATGTTGGTGATTTGCAGGCACTTGCAAAGATCAGTACATATACGATTGGTCCTTTCCAATCTAAAAAACGTGAGAAGGTGAAGGTCAAAGTTCGCTTGAATTTACATGGGATCGTATCTGTAGATTCAGCAACTCTTTTGGAAGAGGAAGAAGTTGAGGTTCCTAAAAGAAAGGTTAAGAAAACAAACATTCCTGTGGTAGAGTTGGTTTATGGAGGAATGGCTCCAGCAGATGTGCAGAAGGCAATAGAAAGTGAGTATGATATGGCTTTACAAGATCGTGTTATGGAAAGACAAGAAGACAGTCATTTCTGGAAATAG

Protein Analysis

556

Amino Acids

61.49

Weight (kDa)

8.18

Isoelectric Point (pI)

35.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 3 - 510 3.9e-139 Hsp70 protein
MreB_Mbl PF06723 136 - 375 1.7e-06 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1042
Acc65I GGTACC 1 cut(s) 946
AccB1I GGYRCC 1 cut(s) 946
AccBSI CCGCTC 2 cut(s) 63, 1244
AccI GTMKAC 1 cut(s) 414
AccII CGCG 2 cut(s) 99, 939
AciI CCGC 6 cut(s) 63, 136, 150, 728, 898, 1244
AclI AACGTT 1 cut(s) 993
AclWI GGATC 5 cut(s) 224, 237, 295, 1254, 1466
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 5 cut(s) 221, 429, 734, 905, 1447
AcuI CTGAAG 2 cut(s) 297, 833
AfaI GTAC 5 cut(s) 711, 749, 948, 1032, 1384
AfiI CCNNNNNNNGG 4 cut(s) 54, 316, 685, 786
AflIII ACRYGT 1 cut(s) 937
AjnI CCWGG 2 cut(s) 1109, 1205
AluBI AGCT 8 cut(s) 386, 464, 539, 652, 665, 797, 811, 1182
AluI AGCT 8 cut(s) 386, 464, 539, 652, 665, 797, 811, 1182
Alw21I GWGCWC 2 cut(s) 925, 1123
AlwI GGATC 5 cut(s) 224, 237, 295, 1254, 1466
AlwNI CAGNNNCTG 2 cut(s) 158, 530
AoxI GGCC 4 cut(s) 45, 281, 777, 960
ApeKI GCWGC 6 cut(s) 133, 158, 404, 476, 649, 797
ApoI RAATTY 5 cut(s) 221, 429, 734, 905, 1447
Asp718I GGTACC 1 cut(s) 946
AspA2I CCTAGG 1 cut(s) 1076
AspLEI GCGC 2 cut(s) 79, 158
AspS9I GGNCC 6 cut(s) 147, 281, 777, 961, 1220, 1397
AsuHPI GGTGA 3 cut(s) 1183, 1367, 1438
AsuNHI GCTAGC 1 cut(s) 611
AvaII GGWCC 3 cut(s) 147, 1220, 1397
AvrII CCTAGG 1 cut(s) 1076
AxyI CCTNAGG 1 cut(s) 837
BalI TGGCCA 1 cut(s) 47
BamHI GGATCC 1 cut(s) 229
BanI GGYRCC 1 cut(s) 946
BbsI GAAGAC 1 cut(s) 1653
Bbv12I GWGCWC 2 cut(s) 925, 1123
BbvI GCAGC 6 cut(s) 145, 145, 416, 488, 661, 784
BccI CCATC 1 cut(s) 281
BcgI CGANNNNNNTGC 2 cut(s) 89, 123
BciT130I CCWGG 2 cut(s) 1111, 1207
BfaI CTAG 4 cut(s) 612, 662, 1077, 1095
BfmI CTRYAG 3 cut(s) 522, 1124, 1467
BfoI RGCGCY 1 cut(s) 159
BfuAI ACCTGC 1 cut(s) 1042
BglII AGATCT 1 cut(s) 1313
BisI GCNGC 7 cut(s) 134, 159, 405, 477, 650, 729, 798
BlnI CCTAGG 1 cut(s) 1076
BlsI GCNGC 7 cut(s) 135, 160, 406, 478, 651, 730, 799
BmcAI AGTACT 1 cut(s) 711
Bme1390I CCNGG 2 cut(s) 1111, 1207
Bme18I GGWCC 3 cut(s) 147, 1220, 1397
BmgT120I GGNCC 6 cut(s) 147, 281, 777, 961, 1220, 1397
BmiI GGNNCC 7 cut(s) 148, 231, 948, 1074, 1216, 1509, 1572
BmrFI CCNGG 2 cut(s) 1111, 1207
BmsI GCATC 3 cut(s) 463, 961, 1216
BmtI GCTAGC 1 cut(s) 615
BpiI GAAGAC 1 cut(s) 1653
BpmI CTGGAG 1 cut(s) 1557
Bsa29I ATCGAT 1 cut(s) 1347
BsaBI GATNNNNATC 2 cut(s) 291, 975
BsaJI CCNNGG 4 cut(s) 48, 1076, 1110, 1269
BsaWI WCCGGW 2 cut(s) 433, 1217
Bsc4I CCNNNNNNNGG 4 cut(s) 54, 316, 685, 786
Bse21I CCTNAGG 1 cut(s) 837
Bse3DI GCAATG 3 cut(s) 34, 627, 1140
Bse8I GATNNNNATC 2 cut(s) 291, 975
BseBI CCWGG 2 cut(s) 1111, 1207
BseCI ATCGAT 1 cut(s) 1347
BseDI CCNNGG 4 cut(s) 48, 1076, 1110, 1269
BseGI GGATG 2 cut(s) 478, 907
BseJI GATNNNNATC 2 cut(s) 291, 975
BseLI CCNNNNNNNGG 4 cut(s) 54, 316, 685, 786
BseMI GCAATG 3 cut(s) 34, 627, 1140
BseMII CTCAG 2 cut(s) 401, 828
BseRI GAGGAG 1 cut(s) 1254
BseXI GCAGC 6 cut(s) 145, 145, 416, 488, 661, 784
BseYI CCCAGC 1 cut(s) 488
BsgI GTGCAG 2 cut(s) 1358, 1604
Bsh1236I CGCG 2 cut(s) 99, 939
BshFI GGCC 4 cut(s) 47, 283, 779, 962
BshNI GGYRCC 1 cut(s) 946
BshVI ATCGAT 1 cut(s) 1347
BsiHKAI GWGCWC 2 cut(s) 925, 1123
BsiSI CCGG 2 cut(s) 434, 1218
BslFI GGGAC 2 cut(s) 160, 241
BslI CCNNNNNNNGG 4 cut(s) 54, 316, 685, 786
BsmFI GGGAC 2 cut(s) 160, 241
BsmI GAATGC 1 cut(s) 1096
BsnI GGCC 4 cut(s) 47, 283, 779, 962
Bsp1286I GDGCHC 2 cut(s) 925, 1123
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 6 cut(s) 63, 136, 150, 728, 898, 1244
BspANI GGCC 4 cut(s) 47, 283, 779, 962
BspCNI CTCAG 2 cut(s) 400, 829
BspDI ATCGAT 1 cut(s) 1347
BspFNI CGCG 2 cut(s) 99, 939
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 7 cut(s) 148, 231, 948, 1074, 1216, 1509, 1572
BspMAI CTGCAG 1 cut(s) 1128
BspMI ACCTGC 1 cut(s) 1042
BspOI GCTAGC 1 cut(s) 615
BspPI GGATC 5 cut(s) 224, 237, 295, 1254, 1466
BspQI GCTCTTC 1 cut(s) 454
BspT107I GGYRCC 1 cut(s) 946
BsrBI CCGCTC 2 cut(s) 63, 1244
BsrDI GCAATG 3 cut(s) 34, 627, 1140
BssECI CCNNGG 4 cut(s) 48, 1076, 1110, 1269
BssT1I CCWWGG 3 cut(s) 48, 1076, 1269
Bst2UI CCWGG 2 cut(s) 1111, 1207
Bst4CI ACNGT 3 cut(s) 714, 1003, 1652
Bst6I CTCTTC 4 cut(s) 81, 454, 738, 1485
BstAPI GCANNNNNTGC 1 cut(s) 158
BstC8I GCNNGC 7 cut(s) 154, 609, 613, 617, 634, 781, 1365
BstDEI CTNAG 5 cut(s) 387, 503, 824, 837, 1139
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 2 cut(s) 478, 907
BstFNI CGCG 2 cut(s) 99, 939
BstH2I RGCGCY 1 cut(s) 159
BstHHI GCGC 2 cut(s) 79, 158
BstMWI GCNNNNNNNGC 3 cut(s) 158, 485, 633
BstNI CCWGG 2 cut(s) 1111, 1207
BstNSI RCATGY 2 cut(s) 611, 619
BstSCI CCNGG 2 cut(s) 1109, 1205
BstSFI CTRYAG 3 cut(s) 522, 1124, 1467
BstUI CGCG 2 cut(s) 99, 939
BstV1I GCAGC 6 cut(s) 145, 145, 416, 488, 661, 784
BstV2I GAAGAC 1 cut(s) 1653
BstX2I RGATCY 2 cut(s) 229, 1313
BstYI RGATCY 2 cut(s) 229, 1313
Bsu15I ATCGAT 1 cut(s) 1347
Bsu36I CCTNAGG 1 cut(s) 837
BsuRI GGCC 4 cut(s) 47, 283, 779, 962
BsuTUI ATCGAT 1 cut(s) 1347
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 2 cut(s) 478, 907
BtsI GCAGTG 1 cut(s) 1133
BtsIMutI CAGTG 3 cut(s) 444, 863, 1133
BveI ACCTGC 1 cut(s) 1042
Cac8I GCNNGC 7 cut(s) 154, 609, 613, 617, 634, 781, 1365
CaiI CAGNNNCTG 2 cut(s) 158, 530
CciI TCATGA 1 cut(s) 514
CfoI GCGC 2 cut(s) 79, 158
Cfr13I GGNCC 6 cut(s) 147, 281, 777, 961, 1220, 1397
ClaI ATCGAT 1 cut(s) 1347
Csp6I GTAC 5 cut(s) 710, 748, 947, 1031, 1383
CspCI CAANNNNNGTGG 2 cut(s) 16, 51
CviAII CATG 6 cut(s) 49, 305, 515, 608, 616, 1454
CviQI GTAC 5 cut(s) 710, 748, 947, 1031, 1383
DdeI CTNAG 5 cut(s) 387, 503, 824, 837, 1139
EaeI YGGCCR 1 cut(s) 45
Eam1104I CTCTTC 4 cut(s) 81, 454, 738, 1485
EarI CTCTTC 4 cut(s) 81, 454, 738, 1485
Eco130I CCWWGG 3 cut(s) 48, 1076, 1269
Eco32I GATATC 2 cut(s) 250, 293
Eco47I GGWCC 3 cut(s) 147, 1220, 1397
Eco57I CTGAAG 2 cut(s) 297, 833
Eco81I CCTNAGG 1 cut(s) 837
EcoO109I RGGNCCY 3 cut(s) 281, 777, 961
EcoRI GAATTC 1 cut(s) 429
EcoRII CCWGG 2 cut(s) 1109, 1205
EcoRV GATATC 2 cut(s) 250, 293
EcoT14I CCWWGG 3 cut(s) 48, 1076, 1269
ErhI CCWWGG 3 cut(s) 48, 1076, 1269
FaeI CATG 6 cut(s) 52, 308, 518, 611, 619, 1457
FaqI GGGAC 2 cut(s) 160, 241
FatI CATG 6 cut(s) 48, 304, 514, 607, 615, 1453
FauI CCCGC 1 cut(s) 891
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 7 cut(s) 134, 159, 405, 477, 650, 729, 798
FokI GGATG 2 cut(s) 485, 914
Fsp4HI GCNGC 7 cut(s) 134, 159, 405, 477, 650, 729, 798
FspBI CTAG 4 cut(s) 612, 662, 1077, 1095
GlaI GCGC 2 cut(s) 78, 157
GluI GCNGC 7 cut(s) 134, 159, 405, 477, 650, 729, 798
GsaI CCCAGC 1 cut(s) 492
GsuI CTGGAG 1 cut(s) 1557
HaeII RGCGCY 1 cut(s) 159
HaeIII GGCC 4 cut(s) 47, 283, 779, 962
HapII CCGG 2 cut(s) 434, 1218
HhaI GCGC 2 cut(s) 79, 158
Hin1II CATG 6 cut(s) 52, 308, 518, 611, 619, 1457
Hin6I GCGC 2 cut(s) 77, 156
HinP1I GCGC 2 cut(s) 77, 156
HinfI GANTC 4 cut(s) 89, 394, 546, 1472
HpaII CCGG 2 cut(s) 434, 1218
HphI GGTGA 3 cut(s) 1183, 1367, 1438
Hpy166II GTNNAC 3 cut(s) 415, 763, 1031
Hpy188I TCNGA 5 cut(s) 229, 370, 375, 390, 1160
Hpy188III TCNNGA 8 cut(s) 515, 640, 836, 968, 1045, 1192, 1223, 1660
Hpy8I GTNNAC 3 cut(s) 415, 763, 1031
HpyCH4III ACNGT 3 cut(s) 714, 1003, 1652
HpyCH4IV ACGT 3 cut(s) 993, 1322, 1417
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 485, 633
HpyF3I CTNAG 5 cut(s) 387, 503, 824, 837, 1139
HpySE526I ACGT 3 cut(s) 993, 1322, 1417
Hsp92II CATG 6 cut(s) 52, 308, 518, 611, 619, 1457
HspAI GCGC 2 cut(s) 77, 156
KpnI GGTACC 1 cut(s) 950
LguI GCTCTTC 1 cut(s) 454
LmnI GCTCC 4 cut(s) 928, 1072, 1241, 1576
Lsp1109I GCAGC 6 cut(s) 145, 145, 416, 488, 661, 784
LweI GCATC 3 cut(s) 463, 961, 1216
MaeI CTAG 4 cut(s) 612, 662, 1077, 1095
MaeII ACGT 3 cut(s) 993, 1322, 1417
MaeIII GTNAC 1 cut(s) 271
MbiI CCGCTC 2 cut(s) 63, 1244
MfeI CAATTG 1 cut(s) 578
MflI RGATCY 2 cut(s) 229, 1313
MhlI GDGCHC 2 cut(s) 925, 1123
MlsI TGGCCA 1 cut(s) 47
MluCI AATT 8 cut(s) 221, 429, 483, 578, 734, 905, 915, 1447
MluI ACGCGT 1 cut(s) 937
MluNI TGGCCA 1 cut(s) 47
MlyI GAGTC 1 cut(s) 98
MmeI TCCRAC 1 cut(s) 193
Mox20I TGGCCA 1 cut(s) 47
MscI TGGCCA 1 cut(s) 47
MseI TTAA 5 cut(s) 399, 738, 863, 894, 1524
MslI CAYNNNNRTG 1 cut(s) 1541
Msp20I TGGCCA 1 cut(s) 47
MspA1I CMGCKG 2 cut(s) 136, 652
MspI CCGG 2 cut(s) 434, 1218
MspR9I CCNGG 2 cut(s) 1111, 1207
MunI CAATTG 1 cut(s) 578
Mva1269I GAATGC 1 cut(s) 1096
MvaI CCWGG 2 cut(s) 1111, 1207
MvnI CGCG 2 cut(s) 99, 939
MwoI GCNNNNNNNGC 3 cut(s) 158, 485, 633
NcoI CCATGG 1 cut(s) 48
NheI GCTAGC 1 cut(s) 611
NlaIII CATG 6 cut(s) 52, 308, 518, 611, 619, 1457
NlaIV GGNNCC 7 cut(s) 148, 231, 948, 1074, 1216, 1509, 1572
NspI RCATGY 2 cut(s) 611, 619
PaeI GCATGC 2 cut(s) 611, 619
PagI TCATGA 1 cut(s) 514
PciSI GCTCTTC 1 cut(s) 454
PctI GAATGC 1 cut(s) 1096
PfeI GAWTC 3 cut(s) 394, 546, 1472
PfoI TCCNGGA 1 cut(s) 1205
PkrI GCNGC 7 cut(s) 135, 160, 406, 478, 651, 730, 799
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
Psp1406I AACGTT 1 cut(s) 993
Psp6I CCWGG 2 cut(s) 1109, 1205
PspFI CCCAGC 1 cut(s) 488
PspGI CCWGG 2 cut(s) 1109, 1205
PspN4I GGNNCC 7 cut(s) 148, 231, 948, 1074, 1216, 1509, 1572
PspPI GGNCC 6 cut(s) 147, 281, 777, 961, 1220, 1397
PstI CTGCAG 1 cut(s) 1128
PstNI CAGNNNCTG 2 cut(s) 158, 530
PsuI RGATCY 2 cut(s) 229, 1313
PvuII CAGCTG 1 cut(s) 652
RsaI GTAC 5 cut(s) 711, 749, 948, 1032, 1384
RsaNI GTAC 5 cut(s) 710, 748, 947, 1031, 1383
RseI CAYNNNNRTG 1 cut(s) 1541
SapI GCTCTTC 1 cut(s) 454
SaqAI TTAA 5 cut(s) 399, 738, 863, 894, 1524
SatI GCNGC 7 cut(s) 134, 159, 405, 477, 650, 729, 798
Sau96I GGNCC 6 cut(s) 147, 281, 777, 961, 1220, 1397
ScaI AGTACT 1 cut(s) 711
SchI GAGTC 1 cut(s) 98
ScrFI CCNGG 2 cut(s) 1111, 1207
SduI GDGCHC 2 cut(s) 925, 1123
SfaNI GCATC 3 cut(s) 463, 961, 1216
SfcI CTRYAG 3 cut(s) 522, 1124, 1467
SinI GGWCC 3 cut(s) 147, 1220, 1397
SmiMI CAYNNNNRTG 1 cut(s) 1541
SphI GCATGC 2 cut(s) 611, 619
Sse9I AATT 8 cut(s) 221, 429, 483, 578, 734, 905, 915, 1447
SsiI CCGC 6 cut(s) 63, 136, 150, 728, 898, 1244
SspI AATATT 1 cut(s) 853
SspMI CTAG 4 cut(s) 612, 662, 1077, 1095
StyD4I CCNGG 2 cut(s) 1109, 1205
StyI CCWWGG 3 cut(s) 48, 1076, 1269
TaaI ACNGT 3 cut(s) 714, 1003, 1652
TaiI ACGT 3 cut(s) 996, 1325, 1420
TaqI TCGA 4 cut(s) 793, 969, 1193, 1347
TasI AATT 8 cut(s) 221, 429, 483, 578, 734, 905, 915, 1447
TatI WGTACW 3 cut(s) 709, 747, 1382
TauI GCSGC 1 cut(s) 731
TfiI GAWTC 3 cut(s) 394, 546, 1472
Tru1I TTAA 5 cut(s) 399, 738, 863, 894, 1524
Tru9I TTAA 5 cut(s) 399, 738, 863, 894, 1524
TscAI CASTG 3 cut(s) 451, 863, 1133
TseI GCWGC 6 cut(s) 133, 158, 404, 476, 649, 797
TspGWI ACGGA 1 cut(s) 285
TspRI CASTG 3 cut(s) 451, 863, 1133
VpaK11BI GGWCC 3 cut(s) 147, 1220, 1397
XapI RAATTY 5 cut(s) 221, 429, 734, 905, 1447
XceI RCATGY 2 cut(s) 611, 619
XmaJI CCTAGG 1 cut(s) 1076
XmiI GTMKAC 1 cut(s) 414
XspI CTAG 4 cut(s) 612, 662, 1077, 1095
ZrmI AGTACT 1 cut(s) 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.