Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002937

Physical Location & Seq

Genomic Coordinates Forward (+)

30332594 .. 30337218

Gene Structure 4625 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00106760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2544 bp

ATGAGTGTGGTGGGATTTGATTTTGGCAATGAGAGTGGCATTGTGGCCGTGGCAAGGCAGAGGGGTATTGATGTCGTGCTCAATGACGAGTCCAAACGTGAAACTCCTGCCATTGTTTGTTTCGGGGAAAAGCAGCGGTTCATTGGGACCGCAGGCGCCGCGTCGTCTATGATGAACCCGAAGAACACGATTTCGCAGATCAAGCGCTTGGTTGGAAAGAAATTCTCGGATCCCGTGTTGCAGAGGGATATCAAGTCCCTGCCTTTTGCTGTTACTGAAGGGCCTGATGGATATCCGTTGATCCATGCCCGTTTTTTGGGAGAAGCCAAGACATTCACGCCCACCCAAGTTTTGGGCATGGTGTTCTCTGATCTGAAAATCATAGCCCAGAAGAATCTTAATGCAGCAGTTGTAGACTGCTGTATAGGAATTCCGGTTTATTTCACTGATCTCCAAAGAAGAGCTGTTGAGGATGCAGCCCGAATTGCTGGGTTGAACCCTCTTAGGTTGTTTCATGAAACTACAGCAACTGCTTTAGCTTATGGAATCTACAAGACAGATTTACCAGAGAACGACCAATTGAATGTTGCCTTTGTTGATATTGGGCATGCTAGCATGCAAGTTTGCATTGCTGGCTTCAAGAAGGGGCAGCTGAAAGTTCTAGCTCATTCATTTGACCTGTCTTTGGGTGGTAGGGATTTTGATGAAGTACTGTTCCACCACTTTGCGGCAAAATTTAAGGAAGAGTACAAGATAGATGTTTACCAGAATGCAAGGGCCTGCCTTCGGCTTCGAGCTGCTTGTGAGAAGCTGAAGAAGGTGCTTAGTGCAAATCCTGAGGCACCTTTGAATATTGAGTGCTTAATGGACGAGAAAGATGTTAGAGGTTTTATTAAGCGGGATGAATTTGAACAAATTAGTGCTCCTATTTTGGAACGTGTAAAGGTACCTTTGGAGAAGGCCCTTCTGGATGCAAATCTTTCAATAGAGAATGTTCATACTGTTGAGGTTGTTGGTTCAGGCTCTCGTGTACCTGCTATAATCAAGATATTGACAGAGTTCTTCAAAAAGGAGCCTAGGAGAACTATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCTCTGCAGTGTGCAATGCTTAGTCCTACATTCAAAGTCCGAGAATTTCAGGTGAATGAGAGCTTCCCATTCTCGATTGCTTTATCCTGGAAAGGTTCTGGTCCAGATGCCCAGAATGGAGGAGCGGATCAAACTACTATTGTCTTTCCCAAGGGAAATCCCATTCCAAGTTTCAAGGCTCTTACATTTTACAGATCTGGCACGTTTTCAGTTGAGGTGCAGTATACCGATGTTGGTGATTTGCAGGCACCTGTAAAGATCAGTACATATACGATTGGTCCTTTCCAGTCTAATAAAAGTGAGAGGGCGAAGGTGAAGGTCAAAGTTCGCTTGAATTTACATGGGATCGTATCTGTAGATTCAGCAACTCTTTTGGAAGAGGAAGAAGTTGAGGTTCCTGTCACAAAAGAGCAACCAAAGGAGGCCACTAAGATGGAGACTGATGAGGCACCCAGTGATGCACCTCCCCCAAGTTCTGAGGGGAATGATGTGAACATGCAAGATGCTAAGAGCACTGATGCTCCAAGTGCTGAGAATGGTGTCCCCGAGTCTGGCGACAAGCCTGTGCAGATGGAAACAGATGCCAAGGCTGATGCTCCTAAAAGAAAGGTTAAGAAAACAAACATTCCTGTGGTAGAGTTAGTTTATGGAGGAATGACTCCAGCAGATGTGCAGAAGGCAATGGAAATTGAGTATGAGATGGCTTTACAAGATCGTGTTATGGAAGAAACAAAAGACAAGAAAAATGCTGTTGAGGCATATGTTTATGATATGAGAAACAAGTTGAGTGACAAGTACCAGGAATTTGTCACTGACTCGGAGAGGGAAGCATTTATCACCAAACTTCAGGAGACGGAAGACTGGCTATATGAAGATGGTGAGGACGAAACCAAAGGTGTTTATATTGCCAAGCTTGAGGAGCTTAAGAAGCAAGGTGATGCCATCGAAGAGCGATACAAGGAGCATACAGAGAGGGGATCTGTCATTGACCAACTAGGTTACTGTGTTAACAGTTACAGAGAAGCTGCAGTGTCAACTGATCCAAAATTCGAGCACATCGATGTTGCTGAAAAACAAAAGGTCTTAAATGAGTGTGTTGAAGCTGAGGCCTGGATAAGAGAGAAAAAGCAGCAACAGGATTCACTGCCAAAACATGCTACTCCAGTACTCTTGTCAGCTGATGTGAAGAGGAAGACTGAAGCACTCGATAGGTTCTGTAGACCAATAATGACAAAACCAAAACCAGCACCAGTCAAACCAGCTACTCCTGAACCACAACCAAGCCCATCTCCTCAGGGAAGCGATCAACCCCAGAGTGGTGAAGGCCATGCCAATCCCAACTCCAATGAGAATCCTGCTGCTGGTGACAATGAGGTTCCAGCTGAACCAATGGAAACAGACAAGTCAGAAGATCCCCAGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0008144 GO:0008150 GO:0009266 GO:0009408 GO:0009506 GO:0009628 GO:0010035 GO:0010038 GO:0016020 GO:0017076 GO:0030054 GO:0030312 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0055044 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04530 ko04612 map04530 map04612

Pfam Domains

Protein Families

HSP70 MreB_Mbl

Protein Analysis

847

Amino Acids

93.68

Weight (kDa)

5.22

Isoelectric Point (pI)

42.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	3 - 692	7.4e-157	Hsp70 protein
MreB_Mbl	PF06723	136 - 375	3.7e-06	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79920 AT1G79920 AT1G79920 AT1G79920 AT1G79930 AT1G79930
fragaria_vesca	FvH4_6g31170 FvH4_6g31170 FvH4_6g31170 FvH4_6g31170
malus_domestica	MD09G1212600.v1.1 MD09G1213000.v1.1 MD09G1213700.v1.1
prunus_persica	Prupe.3G071300_v2.0.a1 Prupe.3G071300_v2.0.a1 Prupe.3G071300_v2.0.a1
pyrus_communis	pycom09g13020 pycom17g20100
rosa_chinensis	RchiOBHm_Chr2g0137851 RchiOBHm_Chr2g0137861
rosa_laevigata	RLG00000019681 RLG00000019684
rosa_multiflora	Rmu_sc0002170.1_g000008 Rmu_sc0002170.1_g000011 Rmu_sc0007548.1_g000005
rosa_roxburghii	Rroxscaffold_2G00106730 Rroxscaffold_2G00106760
rosa_rugosa	Rorug02G0347100 Rorug02G0347100 Rorug02G0347200 Rorug02G0347300
rosa_samantha	Rh2AG393500 Rh2AG393700 Rh2BG401000 Rh2CG380200 Rh2CG380400 Rh2DG416000
rosa_wichuraiana	Rw2G032230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1042
Acc65I	GGTACC	1 cut(s)	946
AccB1I	GGYRCC	5 cut(s)	155, 841, 946, 1366, 1567
AccB7I	CCANNNNNTGG	1 cut(s)	352
AccBSI	CCGCTC	1 cut(s)	1244
AccI	GTMKAC	3 cut(s)	414, 1343, 2338
AccII	CGCG	1 cut(s)	161
AciI	CCGC	6 cut(s)	136, 150, 159, 728, 898, 1244
AclWI	GGATC	8 cut(s)	224, 237, 295, 1254, 1472, 2104, 2153, 2525
AcoI	YGGCCR	1 cut(s)	45
AcsI	RAATTY	8 cut(s)	221, 429, 734, 905, 1163, 1453, 1922, 2165
AcuI	CTGAAG	4 cut(s)	297, 833, 1949, 2337
AcyI	GRCGYC	1 cut(s)	156
AdeI	CACNNNGTG	1 cut(s)	1574
AfaI	GTAC	7 cut(s)	711, 749, 948, 1032, 1384, 1916, 2286
AfeI	AGCGCT	1 cut(s)	206
AfiI	CCNNNNNNNGG	9 cut(s)	54, 316, 352, 685, 727, 786, 1670, 2435, 2480
AflII	CTTAAG	1 cut(s)	2042
AflIII	ACRYGT	1 cut(s)	937
AjnI	CCWGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
Alw21I	GWGCWC	5 cut(s)	81, 925, 1123, 1634, 2175
Alw26I	GTCTC	2 cut(s)	1550, 1964
AlwI	GGATC	8 cut(s)	224, 237, 295, 1254, 1472, 2104, 2153, 2525
AlwNI	CAGNNNCTG	1 cut(s)	530
Ama87I	CYCGRG	1 cut(s)	1664
Aor51HI	AGCGCT	1 cut(s)	206
AoxI	GGCC	8 cut(s)	45, 281, 777, 960, 1542, 2226, 2443, 2538
ApeKI	GCWGC	8 cut(s)	133, 404, 476, 649, 797, 2144, 2248, 2477
ApoI	RAATTY	8 cut(s)	221, 429, 734, 905, 1163, 1453, 1922, 2165
Asp718I	GGTACC	1 cut(s)	946
AspA2I	CCTAGG	1 cut(s)	1076
AspLEI	GCGC	2 cut(s)	158, 207
AspS9I	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
AsuHPI	GGTGA	8 cut(s)	1183, 1367, 1444, 1948, 2009, 2066, 2450, 2495
AsuNHI	GCTAGC	1 cut(s)	611
AvaI	CYCGRG	1 cut(s)	1664
AvaII	GGWCC	3 cut(s)	147, 1220, 1397
AvrII	CCTAGG	1 cut(s)	1076
AxyI	CCTNAGG	2 cut(s)	837, 2412
BamHI	GGATCC	1 cut(s)	229
BanI	GGYRCC	5 cut(s)	155, 841, 946, 1366, 1567
BauI	CACGAG	1 cut(s)	1026
BbsI	GAAGAC	2 cut(s)	1983, 2318
Bbv12I	GWGCWC	5 cut(s)	81, 925, 1123, 1634, 2175
BbvCI	CCTCAGC	1 cut(s)	2223
BbvI	GCAGC	8 cut(s)	145, 416, 488, 661, 784, 2131, 2260, 2464
BccI	CCATC	7 cut(s)	281, 1546, 1684, 1813, 1988, 2069, 2413
BceAI	ACGGC	1 cut(s)	32
BciT130I	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
BcoDI	GTCTC	2 cut(s)	1550, 1964
BfaI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
BfmI	CTRYAG	5 cut(s)	522, 1124, 1473, 2145, 2335
BfoI	RGCGCY	2 cut(s)	159, 208
BfrI	CTTAAG	1 cut(s)	2042
BfuAI	ACCTGC	1 cut(s)	1042
BglII	AGATCT	1 cut(s)	1313
BlnI	CCTAGG	1 cut(s)	1076
BmcAI	AGTACT	2 cut(s)	711, 2286
Bme1390I	CCNGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
Bme18I	GGWCC	3 cut(s)	147, 1220, 1397
BmeT110I	CYCGRG	1 cut(s)	1664
BmgT120I	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
BmrFI	CCNGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
BmrI	ACTGGG	1 cut(s)	1566
BmsI	GCATC	9 cut(s)	463, 961, 1216, 1567, 1612, 1627, 1690, 1702, 2047
BmtI	GCTAGC	1 cut(s)	615
BmuI	ACTGGG	1 cut(s)	1566
BpiI	GAAGAC	2 cut(s)	1983, 2318
BpmI	CTGGAG	2 cut(s)	1764, 2265
Bpu10I	CCTNAGC	1 cut(s)	2223
BpuEI	CTTGAG	1 cut(s)	2054
Bsa29I	ATCGAT	1 cut(s)	2178
BsaBI	GATNNNNATC	2 cut(s)	291, 975
BsaHI	GRCGYC	1 cut(s)	156
BsaJI	CCNNGG	6 cut(s)	48, 1076, 1110, 1269, 1704, 2535
BsaWI	WCCGGW	1 cut(s)	433
BsaXI	ACNNNNNCTCC	2 cut(s)	1624, 1654
Bsc4I	CCNNNNNNNGG	9 cut(s)	54, 316, 352, 685, 727, 786, 1670, 2435, 2480
Bse1I	ACTGG	5 cut(s)	1405, 1572, 1985, 2282, 2369
Bse21I	CCTNAGG	2 cut(s)	837, 2412
Bse3DI	GCAATG	4 cut(s)	34, 627, 1140, 1806
Bse8I	GATNNNNATC	2 cut(s)	291, 975
BseBI	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
BseCI	ATCGAT	1 cut(s)	2178
BseDI	CCNNGG	6 cut(s)	48, 1076, 1110, 1269, 1704, 2535
BseGI	GGATG	3 cut(s)	478, 907, 976
BseJI	GATNNNNATC	2 cut(s)	291, 975
BseLI	CCNNNNNNNGG	9 cut(s)	54, 316, 352, 685, 727, 786, 1670, 2435, 2480
BseMI	GCAATG	4 cut(s)	34, 627, 1140, 1806
BseMII	CTCAG	5 cut(s)	828, 1587, 1641, 2214, 2426
BseNI	ACTGG	5 cut(s)	1405, 1572, 1985, 2282, 2369
BseRI	GAGGAG	3 cut(s)	1254, 2051, 2400
BseXI	GCAGC	8 cut(s)	145, 416, 488, 661, 784, 2131, 2260, 2464
BseYI	CCCAGC	1 cut(s)	488
BsgI	GTGCAG	3 cut(s)	1358, 1706, 1811
Bsh1236I	CGCG	1 cut(s)	161
BshFI	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
BshNI	GGYRCC	5 cut(s)	155, 841, 946, 1366, 1567
BshVI	ATCGAT	1 cut(s)	2178
BsiHKAI	GWGCWC	5 cut(s)	81, 925, 1123, 1634, 2175
BsiHKCI	CYCGRG	1 cut(s)	1664
BsiSI	CCGG	1 cut(s)	434
BslFI	GGGAC	3 cut(s)	160, 241, 1646
BslI	CCNNNNNNNGG	9 cut(s)	54, 316, 352, 685, 727, 786, 1670, 2435, 2480
BsmAI	GTCTC	2 cut(s)	1550, 1964
BsmBI	CGTCTC	1 cut(s)	1964
BsmFI	GGGAC	3 cut(s)	160, 241, 1646
BsmI	GAATGC	2 cut(s)	775, 1096
BsnI	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
BsoBI	CYCGRG	1 cut(s)	1664
Bsp1286I	GDGCHC	5 cut(s)	81, 925, 1123, 1634, 2175
BspACI	CCGC	6 cut(s)	136, 150, 159, 728, 898, 1244
BspANI	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
BspCNI	CTCAG	5 cut(s)	829, 1588, 1642, 2215, 2425
BspDI	ATCGAT	1 cut(s)	2178
BspFNI	CGCG	1 cut(s)	161
BspHI	TCATGA	1 cut(s)	514
BspMAI	CTGCAG	2 cut(s)	1128, 2149
BspMI	ACCTGC	1 cut(s)	1042
BspOI	GCTAGC	1 cut(s)	615
BspPI	GGATC	8 cut(s)	224, 237, 295, 1254, 1472, 2104, 2153, 2525
BspQI	GCTCTTC	2 cut(s)	454, 2061
BspT107I	GGYRCC	5 cut(s)	155, 841, 946, 1366, 1567
BspTI	CTTAAG	1 cut(s)	2042
BsrBI	CCGCTC	1 cut(s)	1244
BsrDI	GCAATG	4 cut(s)	34, 627, 1140, 1806
BsrI	ACTGG	5 cut(s)	1405, 1572, 1985, 2282, 2369
BssECI	CCNNGG	6 cut(s)	48, 1076, 1110, 1269, 1704, 2535
BssNAI	GTATAC	1 cut(s)	1344
BssNI	GRCGYC	1 cut(s)	156
BssSI	CACGAG	1 cut(s)	1026
BssT1I	CCWWGG	3 cut(s)	1076, 1269, 1704
Bst1107I	GTATAC	1 cut(s)	1344
Bst2BI	CACGAG	1 cut(s)	1026
Bst2UI	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
Bst4CI	ACNGT	4 cut(s)	714, 1003, 2123, 2132
Bst6I	CTCTTC	5 cut(s)	454, 738, 1491, 2061, 2300
BstACI	GRCGYC	1 cut(s)	156
BstAFI	CTTAAG	1 cut(s)	2042
BstC8I	GCNNGC	7 cut(s)	154, 609, 613, 617, 634, 781, 1365
BstDSI	CCRYGG	1 cut(s)	48
BstF5I	GGATG	3 cut(s)	478, 907, 976
BstFNI	CGCG	1 cut(s)	161
BstH2I	RGCGCY	2 cut(s)	159, 208
BstHHI	GCGC	2 cut(s)	158, 207
BstMAI	GTCTC	2 cut(s)	1550, 1964
BstMWI	GCNNNNNNNGC	8 cut(s)	158, 202, 485, 633, 1646, 1874, 2038, 2047
BstNI	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
BstNSI	RCATGY	4 cut(s)	611, 619, 1618, 2276
BstSCI	CCNGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
BstSFI	CTRYAG	5 cut(s)	522, 1124, 1473, 2145, 2335
BstUI	CGCG	1 cut(s)	161
BstV1I	GCAGC	8 cut(s)	145, 416, 488, 661, 784, 2131, 2260, 2464
BstV2I	GAAGAC	2 cut(s)	1983, 2318
BstX2I	RGATCY	4 cut(s)	229, 1313, 2096, 2530
BstXI	CCANNNNNNTGG	1 cut(s)	1552
BstYI	RGATCY	4 cut(s)	229, 1313, 2096, 2530
BstZ17I	GTATAC	1 cut(s)	1344
Bsu15I	ATCGAT	1 cut(s)	2178
Bsu36I	CCTNAGG	2 cut(s)	837, 2412
BsuRI	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
BsuTUI	ATCGAT	1 cut(s)	2178
BtgI	CCRYGG	1 cut(s)	48
BtsCI	GGATG	3 cut(s)	478, 907, 976
BtsI	GCAGTG	3 cut(s)	1133, 2154, 2261
BtsIMutI	CAGTG	7 cut(s)	444, 1133, 1579, 1632, 1929, 2154, 2261
BveI	ACCTGC	1 cut(s)	1042
Cac8I	GCNNGC	7 cut(s)	154, 609, 613, 617, 634, 781, 1365
CaiI	CAGNNNCTG	1 cut(s)	530
CciI	TCATGA	1 cut(s)	514
CfoI	GCGC	2 cut(s)	158, 207
Cfr13I	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
ClaI	ATCGAT	1 cut(s)	2178
CseI	GACGC	1 cut(s)	150
Csp6I	GTAC	7 cut(s)	710, 748, 947, 1031, 1383, 1915, 2285
CspCI	CAANNNNNGTGG	2 cut(s)	16, 51
CviAII	CATG	9 cut(s)	305, 358, 515, 608, 616, 1460, 1615, 2273, 2447
CviQI	GTAC	7 cut(s)	710, 748, 947, 1031, 1383, 1915, 2285
DinI	GGCGCC	1 cut(s)	157
DraIII	CACNNNGTG	1 cut(s)	1574
EaeI	YGGCCR	1 cut(s)	45
Eam1104I	CTCTTC	5 cut(s)	454, 738, 1491, 2061, 2300
EarI	CTCTTC	5 cut(s)	454, 738, 1491, 2061, 2300
Eco130I	CCWWGG	3 cut(s)	1076, 1269, 1704
Eco147I	AGGCCT	2 cut(s)	2228, 2540
Eco32I	GATATC	2 cut(s)	250, 293
Eco47I	GGWCC	3 cut(s)	147, 1220, 1397
Eco47III	AGCGCT	1 cut(s)	206
Eco57I	CTGAAG	4 cut(s)	297, 833, 1949, 2337
Eco81I	CCTNAGG	2 cut(s)	837, 2412
Eco88I	CYCGRG	1 cut(s)	1664
EcoO109I	RGGNCCY	3 cut(s)	281, 777, 961
EcoRI	GAATTC	1 cut(s)	429
EcoRII	CCWGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
EcoRV	GATATC	2 cut(s)	250, 293
EcoT14I	CCWWGG	3 cut(s)	1076, 1269, 1704
EgeI	GGCGCC	1 cut(s)	157
EheI	GGCGCC	1 cut(s)	157
ErhI	CCWWGG	3 cut(s)	1076, 1269, 1704
Esp3I	CGTCTC	1 cut(s)	1964
FaeI	CATG	9 cut(s)	308, 361, 518, 611, 619, 1463, 1618, 2276, 2450
FaqI	GGGAC	3 cut(s)	160, 241, 1646
FatI	CATG	9 cut(s)	304, 357, 514, 607, 615, 1459, 1614, 2272, 2446
FauI	CCCGC	1 cut(s)	891
FauNDI	CATATG	1 cut(s)	1879
FblI	GTMKAC	3 cut(s)	414, 1343, 2338
FokI	GGATG	3 cut(s)	485, 914, 983
FspBI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
GlaI	GCGC	2 cut(s)	157, 206
GsaI	CCCAGC	1 cut(s)	492
GsuI	CTGGAG	2 cut(s)	1764, 2265
HaeII	RGCGCY	2 cut(s)	159, 208
HaeIII	GGCC	8 cut(s)	47, 283, 779, 962, 1544, 2228, 2445, 2540
HapII	CCGG	1 cut(s)	434
HgaI	GACGC	1 cut(s)	150
HhaI	GCGC	2 cut(s)	158, 207
Hin1I	GRCGYC	1 cut(s)	156
Hin1II	CATG	9 cut(s)	308, 361, 518, 611, 619, 1463, 1618, 2276, 2450
Hin6I	GCGC	2 cut(s)	156, 205
HinP1I	GCGC	2 cut(s)	156, 205
HincII	GTYRAC	2 cut(s)	2128, 2154
HindII	GTYRAC	2 cut(s)	2128, 2154
HindIII	AAGCTT	1 cut(s)	2030
HinfI	GANTC	9 cut(s)	89, 394, 546, 1478, 1667, 1777, 1934, 2258, 2470
HpaI	GTTAAC	1 cut(s)	2128
HpaII	CCGG	1 cut(s)	434
HphI	GGTGA	8 cut(s)	1183, 1367, 1444, 1948, 2009, 2066, 2450, 2495
Hpy166II	GTNNAC	8 cut(s)	415, 763, 1031, 1344, 1612, 2128, 2154, 2339
Hpy188I	TCNGA	7 cut(s)	229, 370, 375, 1160, 1597, 1939, 2527
Hpy188III	TCNNGA	9 cut(s)	515, 640, 836, 968, 1045, 1192, 1223, 1967, 2387
Hpy8I	GTNNAC	8 cut(s)	415, 763, 1031, 1344, 1612, 2128, 2154, 2339
Hpy99I	CGWCG	1 cut(s)	166
HpyCH4III	ACNGT	4 cut(s)	714, 1003, 2123, 2132
HpyCH4IV	ACGT	3 cut(s)	97, 937, 1322
HpyF10VI	GCNNNNNNNGC	8 cut(s)	158, 202, 485, 633, 1646, 1874, 2038, 2047
HpySE526I	ACGT	3 cut(s)	97, 937, 1322
Hsp92I	GRCGYC	1 cut(s)	156
Hsp92II	CATG	9 cut(s)	308, 361, 518, 611, 619, 1463, 1618, 2276, 2450
HspAI	GCGC	2 cut(s)	156, 205
KasI	GGCGCC	1 cut(s)	155
KpnI	GGTACC	1 cut(s)	950
KspAI	GTTAAC	1 cut(s)	2128
LguI	GCTCTTC	2 cut(s)	454, 2061
LmnI	GCTCC	7 cut(s)	928, 1072, 1241, 1645, 1720, 2038, 2080
Lsp1109I	GCAGC	8 cut(s)	145, 416, 488, 661, 784, 2131, 2260, 2464
LweI	GCATC	9 cut(s)	463, 961, 1216, 1567, 1612, 1627, 1690, 1702, 2047
MaeI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
MaeII	ACGT	3 cut(s)	97, 937, 1322
MaeIII	GTNAC	7 cut(s)	271, 1519, 1907, 1927, 2117, 2132, 2483
MbiI	CCGCTC	1 cut(s)	1244
MfeI	CAATTG	1 cut(s)	578
MflI	RGATCY	4 cut(s)	229, 1313, 2096, 2530
MhlI	GDGCHC	5 cut(s)	81, 925, 1123, 1634, 2175
Mly113I	GGCGCC	1 cut(s)	156
MlyI	GAGTC	4 cut(s)	98, 1676, 1771, 1928
MmeI	TCCRAC	1 cut(s)	193
MseI	TTAA	8 cut(s)	399, 738, 863, 894, 1731, 2043, 2127, 2204
MslI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
MspA1I	CMGCKG	4 cut(s)	136, 652, 2297, 2501
MspCI	CTTAAG	1 cut(s)	2042
MspI	CCGG	1 cut(s)	434
MspR9I	CCNGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
MunI	CAATTG	1 cut(s)	578
Mva1269I	GAATGC	2 cut(s)	775, 1096
MvaI	CCWGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
MvnI	CGCG	1 cut(s)	161
MwoI	GCNNNNNNNGC	8 cut(s)	158, 202, 485, 633, 1646, 1874, 2038, 2047
NarI	GGCGCC	1 cut(s)	156
NdeI	CATATG	1 cut(s)	1879
NheI	GCTAGC	1 cut(s)	611
NlaIII	CATG	9 cut(s)	308, 361, 518, 611, 619, 1463, 1618, 2276, 2450
NmuCI	GTSAC	4 cut(s)	1519, 1907, 1927, 2483
NspI	RCATGY	4 cut(s)	611, 619, 1618, 2276
PaeI	GCATGC	2 cut(s)	611, 619
PagI	TCATGA	1 cut(s)	514
PceI	AGGCCT	2 cut(s)	2228, 2540
PciSI	GCTCTTC	2 cut(s)	454, 2061
PcsI	WCGNNNNNNNCGW	1 cut(s)	2175
PctI	GAATGC	2 cut(s)	775, 1096
PfeI	GAWTC	5 cut(s)	394, 546, 1478, 2258, 2470
PflMI	CCANNNNNTGG	1 cut(s)	352
PfoI	TCCNGGA	1 cut(s)	1205
PleI	GAGTC	4 cut(s)	97, 1675, 1771, 1928
PluTI	GGCGCC	1 cut(s)	159
PpsI	GAGTC	4 cut(s)	97, 1675, 1771, 1928
Psp6I	CCWGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
PspFI	CCCAGC	1 cut(s)	488
PspGI	CCWGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
PspPI	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
PstI	CTGCAG	2 cut(s)	1128, 2149
PstNI	CAGNNNCTG	1 cut(s)	530
PsuI	RGATCY	4 cut(s)	229, 1313, 2096, 2530
PvuII	CAGCTG	3 cut(s)	652, 2297, 2501
RsaI	GTAC	7 cut(s)	711, 749, 948, 1032, 1384, 1916, 2286
RsaNI	GTAC	7 cut(s)	710, 748, 947, 1031, 1383, 1915, 2285
RseI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
SapI	GCTCTTC	2 cut(s)	454, 2061
SaqAI	TTAA	8 cut(s)	399, 738, 863, 894, 1731, 2043, 2127, 2204
Sau96I	GGNCC	6 cut(s)	147, 281, 777, 961, 1220, 1397
ScaI	AGTACT	2 cut(s)	711, 2286
SchI	GAGTC	4 cut(s)	98, 1676, 1771, 1928
ScrFI	CCNGG	5 cut(s)	1111, 1207, 1919, 2230, 2537
SduI	GDGCHC	5 cut(s)	81, 925, 1123, 1634, 2175
SfaNI	GCATC	9 cut(s)	463, 961, 1216, 1567, 1612, 1627, 1690, 1702, 2047
SfcI	CTRYAG	5 cut(s)	522, 1124, 1473, 2145, 2335
SfoI	GGCGCC	1 cut(s)	157
SinI	GGWCC	3 cut(s)	147, 1220, 1397
SmiMI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
SmlI	CTYRAG	2 cut(s)	2033, 2042
SmoI	CTYRAG	2 cut(s)	2033, 2042
SphI	GCATGC	2 cut(s)	611, 619
SseBI	AGGCCT	2 cut(s)	2228, 2540
SsiI	CCGC	6 cut(s)	136, 150, 159, 728, 898, 1244
SspDI	GGCGCC	1 cut(s)	155
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
StuI	AGGCCT	2 cut(s)	2228, 2540
StyD4I	CCNGG	5 cut(s)	1109, 1205, 1917, 2228, 2535
StyI	CCWWGG	3 cut(s)	1076, 1269, 1704
TaaI	ACNGT	4 cut(s)	714, 1003, 2123, 2132
TaiI	ACGT	3 cut(s)	100, 940, 1325
TaqI	TCGA	6 cut(s)	793, 1193, 2064, 2169, 2178, 2325
TatI	WGTACW	4 cut(s)	709, 747, 1382, 2284
TauI	GCSGC	2 cut(s)	161, 731
TfiI	GAWTC	5 cut(s)	394, 546, 1478, 2258, 2470
Tru1I	TTAA	8 cut(s)	399, 738, 863, 894, 1731, 2043, 2127, 2204
Tru9I	TTAA	8 cut(s)	399, 738, 863, 894, 1731, 2043, 2127, 2204
TscAI	CASTG	7 cut(s)	451, 1133, 1579, 1639, 1936, 2154, 2268
TseFI	GTSAC	4 cut(s)	1519, 1907, 1927, 2483
TseI	GCWGC	8 cut(s)	133, 404, 476, 649, 797, 2144, 2248, 2477
Tsp45I	GTSAC	4 cut(s)	1519, 1907, 1927, 2483
TspGWI	ACGGA	2 cut(s)	285, 1988
TspRI	CASTG	7 cut(s)	451, 1133, 1579, 1639, 1936, 2154, 2268
Van91I	CCANNNNNTGG	1 cut(s)	352
Vha464I	CTTAAG	1 cut(s)	2042
VpaK11BI	GGWCC	3 cut(s)	147, 1220, 1397
XapI	RAATTY	8 cut(s)	221, 429, 734, 905, 1163, 1453, 1922, 2165
XceI	RCATGY	4 cut(s)	611, 619, 1618, 2276
XcmI	CCANNNNNNNNNTGG	1 cut(s)	349
XmaJI	CCTAGG	1 cut(s)	1076
XmiI	GTMKAC	3 cut(s)	414, 1343, 2338
XspI	CTAG	6 cut(s)	612, 662, 1077, 1095, 2114, 2542
ZrmI	AGTACT	2 cut(s)	711, 2286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.