Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0002937

Physical Location & Seq

Genomic Coordinates Reverse (-)

60405577 .. 60425825

Gene Structure 20249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG416000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGAGTGTGGTGGGATTTGATTTTGGCAATGAGAGTGGCATTGTGGCCGTGGTAAGGCAGAACGGTATCGATGTTGTGCTCAATGATGAGTCCAAACACGAAACTCCTGCCATTGTTTGTTTCGGGGATAAGCAGCGGTTCATTGGGACCGCAGGCGCTGCTTCATCTATGATGAACCCTAACAACACAATTTCGCAGATCAAACGCTTGGTTGGAAAGAAATTCTCGGATCCCGTGTTGCAGAGGGATATCAAGTCCCTGCCTTTTGCTGTTACTGAAGGGCCTGATGGATATCCGTTGATCCATGCCCGTTATTTGGGAGAAGCCAAGACATTCACGCCCACCCAAGTTTTGGGAATGGTGTTCTCTGATCTGAAAATCATAGCCCAGAAGAATCTTAATGCAGCAGTTGTAGACTGCTGTATAGGAATTCCGGTTTATTTCACTGATCTCCAAAGGAGAGCTGTTGAGGATGCAGCCAGAATTGCTGGGTTGAACCCTCTTAGGTTGTTTCATGAAACTACAGCAACTGCTTTAGCTTATGGAATCTACAAGACAGATTTACCAGAGAACGACCAATTGAATGTTGCCTTTGTTGATATTGGGCATGCTAGCATGCAAGTTTGCATTGCTGGCTTCAAGAAGGGGCAGCTGAATGTTCTAGCTCATTCATTTGACCTGTCTTTGGGTGGTAGGGATTTTGATGAAGTACTGTTCCAGCACTTTGCAGCAAAATTTAAGGAAGAGTACAAGATAGATGTTTACCAGAATGCAACGGCCTGCCTTCGGCTTCGAGCTGCTTGTGAGAAGCTGAAGAAGGTGCTTAGTGCAAATCCTGAGGCACCTTTGAATATTGAGTGCTTAATGGACGAGAAAGATGTTAGAGGTTTTATTAAGCGGGATGAATTTGAACAAATTAGTGCTCCTATTTTGGAACGCGTAAAGGTACCTTTGGAGAAGGCCCTTCTCGATGCAAATCTTTCAATAGAGAACGTTCATACTGTTGAGGTTGTTGGTTCAGGCTTTCGTGTACCTGCTATAATCAAGATATTGATAGAGTTCTTCAAAAAGGAGCCTAGGAGAACCATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCTCTGCAGTGTGCAATGCTTAGTCCTACATTCAAAGTCCGAGAGTTTCAGGTGAATGAGAGCTTCCCATTCTCGATTGCTTTATCCTGGAAAGGTTCTTGTCCAGATGCCCAGAATGGAGGAGCGGATCAAACTACTATCGTCTTTCCCAAGGGAAATCCCATTCCGAGTTTCAAGGCTCTTACATTTTACAGATCTGGCACGTTTTCAATTGATGTGCAGTATACCGATGTTGGTGATTTGCAGGCGCCTGTAAAGATCAGTACATATACGATTGGTCCTTTCCAATCTAATACAAGTGAGAGGGCGAAGGTGAAGGTCAAAGTTCGCTTGAATTTACATGGGATTGTATATGTAGAGTCAGCAACTCTTTTGGAAGAGGAAGAAGTTGAGGTTCCTGTCACAAAAGAGCAACCAAAGGAGGCCACTAAGATGGAGACTGATGAGGCACCCAGTGATGCACCTCCCCCAAGTTCTGAGGGGAATGATGTGAACATGCAAGATGCTAAGAGCACTGATGTTCCAAGTGCTGAGAATGGTGTCCCCGAGTCTGGCGACAAGCCTGTGCAGATGGAAACAGATGCCAAGGCTGATGCTCCTAAAAGAAAGGTTAAGAAAACAATCATTCCTGTGGTAGAGTTGGTATATGGAGGAATGGCTCCAGCAGATGTGCAGAAGGCAATAGAAAGTGAGTATGAGATGGCTTTACAAGATCGTGTTATGGAAGAAACAAAAGACAAGAAAAATGCTGTTGAGGCATATGTTTATGACATGAGAAACAAGCTGAGTGACAAGTACCAGGAATTTGTCACCGACTCGGAGAGGGAAGCATTTATCACCAAACTTCAGGAGACGGAAGACTGGCTATATGAAGATGGTGAGGACGAAACCAAAGGTGTTTATGTTGCCAAGCTTGAGGAGCTTAAGAAGCAAGGTGATGCCATTGAAGAGCGATACAAGGAGCATGCAGAGAGGGGATCTGTCATTGACCAACTAGTTTACTGTGTTAACAGTTACAGAGAAGCTGCAGTATCAACTGATCCAAAATTCGATCACATCGATGTTGCTGACAAAGAAAAGGTAGACTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0008144 GO:0008150 GO:0009266 GO:0009408 GO:0009506 GO:0009628 GO:0010035 GO:0010038 GO:0016020 GO:0017076 GO:0030054 GO:0030312 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0055044 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04530 ko04612 map04530 map04612

Pfam Domains

Protein Families

HSP70 MreB_Mbl

Protein Analysis

736

Amino Acids

81.65

Weight (kDa)

5.03

Isoelectric Point (pI)

37.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	3 - 692	1e-155	Hsp70 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79920 AT1G79920 AT1G79920 AT1G79920 AT1G79930 AT1G79930
fragaria_vesca	FvH4_6g31170 FvH4_6g31170 FvH4_6g31170 FvH4_6g31170
malus_domestica	MD09G1212600.v1.1 MD09G1213000.v1.1 MD09G1213700.v1.1
prunus_persica	Prupe.3G071300_v2.0.a1 Prupe.3G071300_v2.0.a1 Prupe.3G071300_v2.0.a1
pyrus_communis	pycom09g13020 pycom17g20100
rosa_chinensis	RchiOBHm_Chr2g0137851 RchiOBHm_Chr2g0137861
rosa_laevigata	RLG00000019681 RLG00000019684
rosa_multiflora	Rmu_sc0002170.1_g000008 Rmu_sc0002170.1_g000011 Rmu_sc0007548.1_g000005
rosa_roxburghii	Rroxscaffold_2G00106730 Rroxscaffold_2G00106760
rosa_rugosa	Rorug02G0347100 Rorug02G0347100 Rorug02G0347200 Rorug02G0347300
rosa_samantha	Rh2AG393500 Rh2AG393700 Rh2BG401000 Rh2CG380200 Rh2CG380400 Rh2DG416000
rosa_wichuraiana	Rw2G032230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1042
Acc65I	GGTACC	1 cut(s)	946
AccB1I	GGYRCC	4 cut(s)	841, 946, 1366, 1567
AccB7I	CCANNNNNTGG	1 cut(s)	352
AccBSI	CCGCTC	1 cut(s)	1244
AccI	GTMKAC	3 cut(s)	414, 1343, 2202
AccII	CGCG	1 cut(s)	939
AciI	CCGC	4 cut(s)	136, 150, 898, 1244
AclI	AACGTT	1 cut(s)	993
AclWI	GGATC	6 cut(s)	224, 237, 295, 1254, 2104, 2153
AcoI	YGGCCR	1 cut(s)	45
AcsI	RAATTY	7 cut(s)	221, 429, 734, 905, 1453, 1922, 2165
AcuI	CTGAAG	3 cut(s)	297, 833, 1949
AcyI	GRCGYC	1 cut(s)	1367
AdeI	CACNNNGTG	1 cut(s)	1574
AfaI	GTAC	6 cut(s)	711, 749, 948, 1032, 1384, 1916
AfiI	CCNNNNNNNGG	6 cut(s)	54, 316, 352, 685, 786, 1670
AflII	CTTAAG	1 cut(s)	2042
AflIII	ACRYGT	1 cut(s)	937
AhlI	ACTAGT	1 cut(s)	2113
AjnI	CCWGG	3 cut(s)	1109, 1205, 1917
Alw21I	GWGCWC	4 cut(s)	81, 925, 1123, 1634
Alw26I	GTCTC	2 cut(s)	1550, 1964
AlwI	GGATC	6 cut(s)	224, 237, 295, 1254, 2104, 2153
AlwNI	CAGNNNCTG	2 cut(s)	158, 530
Ama87I	CYCGRG	1 cut(s)	1664
AoxI	GGCC	5 cut(s)	45, 281, 777, 960, 1542
ApeKI	GCWGC	8 cut(s)	133, 158, 404, 476, 649, 728, 797, 2144
ApoI	RAATTY	7 cut(s)	221, 429, 734, 905, 1453, 1922, 2165
Asp718I	GGTACC	1 cut(s)	946
AspA2I	CCTAGG	1 cut(s)	1076
AspLEI	GCGC	2 cut(s)	158, 1369
AspS9I	GGNCC	4 cut(s)	147, 281, 961, 1397
AsuHPI	GGTGA	7 cut(s)	1183, 1367, 1444, 1921, 1948, 2009, 2066
AsuNHI	GCTAGC	1 cut(s)	611
AvaI	CYCGRG	1 cut(s)	1664
AvaII	GGWCC	2 cut(s)	147, 1397
AvrII	CCTAGG	1 cut(s)	1076
AxyI	CCTNAGG	1 cut(s)	837
BamHI	GGATCC	1 cut(s)	229
BanI	GGYRCC	4 cut(s)	841, 946, 1366, 1567
BbsI	GAAGAC	1 cut(s)	1983
Bbv12I	GWGCWC	4 cut(s)	81, 925, 1123, 1634
BbvI	GCAGC	8 cut(s)	145, 145, 416, 488, 661, 740, 784, 2131
BccI	CCATC	5 cut(s)	281, 1546, 1684, 1813, 1988
BceAI	ACGGC	2 cut(s)	32, 792
BcgI	CGANNNNNNTGC	2 cut(s)	89, 123
BciT130I	CCWGG	3 cut(s)	1111, 1207, 1919
BcoDI	GTCTC	2 cut(s)	1550, 1964
BcuI	ACTAGT	1 cut(s)	2113
BfaI	CTAG	5 cut(s)	612, 662, 1077, 1095, 2114
BfmI	CTRYAG	3 cut(s)	522, 1124, 2145
BfoI	RGCGCY	2 cut(s)	159, 1370
BfrI	CTTAAG	1 cut(s)	2042
BfuAI	ACCTGC	1 cut(s)	1042
BglII	AGATCT	1 cut(s)	1313
BisI	GCNGC	8 cut(s)	134, 159, 405, 477, 650, 729, 798, 2145
BlnI	CCTAGG	1 cut(s)	1076
BlsI	GCNGC	8 cut(s)	135, 160, 406, 478, 651, 730, 799, 2146
BmcAI	AGTACT	1 cut(s)	711
Bme1390I	CCNGG	3 cut(s)	1111, 1207, 1919
Bme18I	GGWCC	2 cut(s)	147, 1397
BmeT110I	CYCGRG	1 cut(s)	1664
BmgT120I	GGNCC	4 cut(s)	147, 281, 961, 1397
BmiI	GGNNCC	9 cut(s)	148, 231, 843, 948, 1074, 1368, 1515, 1569, 1779
BmrFI	CCNGG	3 cut(s)	1111, 1207, 1919
BmrI	ACTGGG	1 cut(s)	1566
BmsI	GCATC	8 cut(s)	463, 961, 1216, 1567, 1612, 1690, 1702, 2047
BmtI	GCTAGC	1 cut(s)	615
BmuI	ACTGGG	1 cut(s)	1566
BpiI	GAAGAC	1 cut(s)	1983
BpmI	CTGGAG	1 cut(s)	1764
BpuEI	CTTGAG	1 cut(s)	2054
Bsa29I	ATCGAT	2 cut(s)	69, 2178
BsaBI	GATNNNNATC	2 cut(s)	291, 975
BsaHI	GRCGYC	1 cut(s)	1367
BsaJI	CCNNGG	5 cut(s)	48, 1076, 1110, 1269, 1704
BsaWI	WCCGGW	1 cut(s)	433
Bsc4I	CCNNNNNNNGG	6 cut(s)	54, 316, 352, 685, 786, 1670
Bse1I	ACTGG	2 cut(s)	1572, 1985
Bse21I	CCTNAGG	1 cut(s)	837
Bse3DI	GCAATG	3 cut(s)	34, 627, 1140
Bse8I	GATNNNNATC	2 cut(s)	291, 975
BseBI	CCWGG	3 cut(s)	1111, 1207, 1919
BseCI	ATCGAT	2 cut(s)	69, 2178
BseDI	CCNNGG	5 cut(s)	48, 1076, 1110, 1269, 1704
BseGI	GGATG	2 cut(s)	478, 907
BseJI	GATNNNNATC	2 cut(s)	291, 975
BseLI	CCNNNNNNNGG	6 cut(s)	54, 316, 352, 685, 786, 1670
BseMI	GCAATG	3 cut(s)	34, 627, 1140
BseMII	CTCAG	4 cut(s)	828, 1587, 1641, 1895
BseNI	ACTGG	2 cut(s)	1572, 1985
BseRI	GAGGAG	2 cut(s)	1254, 2051
BseXI	GCAGC	8 cut(s)	145, 145, 416, 488, 661, 740, 784, 2131
BseYI	CCCAGC	1 cut(s)	488
BsgI	GTGCAG	3 cut(s)	1358, 1706, 1811
Bsh1236I	CGCG	1 cut(s)	939
BshFI	GGCC	5 cut(s)	47, 283, 779, 962, 1544
BshNI	GGYRCC	4 cut(s)	841, 946, 1366, 1567
BshVI	ATCGAT	2 cut(s)	69, 2178
BsiHKAI	GWGCWC	4 cut(s)	81, 925, 1123, 1634
BsiHKCI	CYCGRG	1 cut(s)	1664
BsiSI	CCGG	1 cut(s)	434
BslFI	GGGAC	3 cut(s)	160, 241, 1646
BslI	CCNNNNNNNGG	6 cut(s)	54, 316, 352, 685, 786, 1670
BsmAI	GTCTC	2 cut(s)	1550, 1964
BsmBI	CGTCTC	1 cut(s)	1964
BsmFI	GGGAC	3 cut(s)	160, 241, 1646
BsmI	GAATGC	2 cut(s)	775, 1096
BsnI	GGCC	5 cut(s)	47, 283, 779, 962, 1544
BsoBI	CYCGRG	1 cut(s)	1664
Bsp1286I	GDGCHC	4 cut(s)	81, 925, 1123, 1634
BspACI	CCGC	4 cut(s)	136, 150, 898, 1244
BspANI	GGCC	5 cut(s)	47, 283, 779, 962, 1544
BspCNI	CTCAG	4 cut(s)	829, 1588, 1642, 1896
BspDI	ATCGAT	2 cut(s)	69, 2178
BspFNI	CGCG	1 cut(s)	939
BspHI	TCATGA	1 cut(s)	514
BspLI	GGNNCC	9 cut(s)	148, 231, 843, 948, 1074, 1368, 1515, 1569, 1779
BspMAI	CTGCAG	2 cut(s)	1128, 2149
BspMI	ACCTGC	1 cut(s)	1042
BspOI	GCTAGC	1 cut(s)	615
BspPI	GGATC	6 cut(s)	224, 237, 295, 1254, 2104, 2153
BspQI	GCTCTTC	1 cut(s)	2061
BspT107I	GGYRCC	4 cut(s)	841, 946, 1366, 1567
BspTI	CTTAAG	1 cut(s)	2042
BsrBI	CCGCTC	1 cut(s)	1244
BsrDI	GCAATG	3 cut(s)	34, 627, 1140
BsrI	ACTGG	2 cut(s)	1572, 1985
BssECI	CCNNGG	5 cut(s)	48, 1076, 1110, 1269, 1704
BssNAI	GTATAC	1 cut(s)	1344
BssNI	GRCGYC	1 cut(s)	1367
BssT1I	CCWWGG	3 cut(s)	1076, 1269, 1704
Bst1107I	GTATAC	1 cut(s)	1344
Bst2UI	CCWGG	3 cut(s)	1111, 1207, 1919
Bst4CI	ACNGT	5 cut(s)	65, 714, 1003, 2123, 2132
Bst6I	CTCTTC	3 cut(s)	738, 1491, 2061
BstACI	GRCGYC	1 cut(s)	1367
BstAFI	CTTAAG	1 cut(s)	2042
BstAPI	GCANNNNNTGC	1 cut(s)	158
BstC8I	GCNNGC	8 cut(s)	154, 609, 613, 617, 634, 781, 1365, 2085
BstDEI	CTNAG	9 cut(s)	503, 824, 837, 1139, 1548, 1596, 1626, 1650, 1904
BstDSI	CCRYGG	1 cut(s)	48
BstF5I	GGATG	2 cut(s)	478, 907
BstFNI	CGCG	1 cut(s)	939
BstH2I	RGCGCY	2 cut(s)	159, 1370
BstHHI	GCGC	2 cut(s)	158, 1369
BstMAI	GTCTC	2 cut(s)	1550, 1964
BstMWI	GCNNNNNNNGC	6 cut(s)	158, 485, 633, 1874, 2038, 2047
BstNI	CCWGG	3 cut(s)	1111, 1207, 1919
BstNSI	RCATGY	4 cut(s)	611, 619, 1618, 2087
BstSCI	CCNGG	3 cut(s)	1109, 1205, 1917
BstSFI	CTRYAG	3 cut(s)	522, 1124, 2145
BstUI	CGCG	1 cut(s)	939
BstV1I	GCAGC	8 cut(s)	145, 145, 416, 488, 661, 740, 784, 2131
BstV2I	GAAGAC	1 cut(s)	1983
BstX2I	RGATCY	3 cut(s)	229, 1313, 2096
BstXI	CCANNNNNNTGG	1 cut(s)	1552
BstYI	RGATCY	3 cut(s)	229, 1313, 2096
BstZ17I	GTATAC	1 cut(s)	1344
Bsu15I	ATCGAT	2 cut(s)	69, 2178
Bsu36I	CCTNAGG	1 cut(s)	837
BsuRI	GGCC	5 cut(s)	47, 283, 779, 962, 1544
BsuTUI	ATCGAT	2 cut(s)	69, 2178
BtgI	CCRYGG	1 cut(s)	48
BtsCI	GGATG	2 cut(s)	478, 907
BtsI	GCAGTG	1 cut(s)	1133
BtsIMutI	CAGTG	4 cut(s)	444, 1133, 1579, 1632
BveI	ACCTGC	1 cut(s)	1042
Cac8I	GCNNGC	8 cut(s)	154, 609, 613, 617, 634, 781, 1365, 2085
CaiI	CAGNNNCTG	2 cut(s)	158, 530
CciI	TCATGA	1 cut(s)	514
CfoI	GCGC	2 cut(s)	158, 1369
Cfr13I	GGNCC	4 cut(s)	147, 281, 961, 1397
ClaI	ATCGAT	2 cut(s)	69, 2178
Csp6I	GTAC	6 cut(s)	710, 748, 947, 1031, 1383, 1915
CspCI	CAANNNNNGTGG	2 cut(s)	16, 51
CviAII	CATG	9 cut(s)	305, 515, 608, 616, 1087, 1460, 1615, 1891, 2084
CviQI	GTAC	6 cut(s)	710, 748, 947, 1031, 1383, 1915
DdeI	CTNAG	9 cut(s)	503, 824, 837, 1139, 1548, 1596, 1626, 1650, 1904
DinI	GGCGCC	1 cut(s)	1368
DraIII	CACNNNGTG	1 cut(s)	1574
EaeI	YGGCCR	1 cut(s)	45
Eam1104I	CTCTTC	3 cut(s)	738, 1491, 2061
EarI	CTCTTC	3 cut(s)	738, 1491, 2061
Eco130I	CCWWGG	3 cut(s)	1076, 1269, 1704
Eco32I	GATATC	2 cut(s)	250, 293
Eco47I	GGWCC	2 cut(s)	147, 1397
Eco57I	CTGAAG	3 cut(s)	297, 833, 1949
Eco81I	CCTNAGG	1 cut(s)	837
Eco88I	CYCGRG	1 cut(s)	1664
EcoO109I	RGGNCCY	2 cut(s)	281, 961
EcoRI	GAATTC	1 cut(s)	429
EcoRII	CCWGG	3 cut(s)	1109, 1205, 1917
EcoRV	GATATC	2 cut(s)	250, 293
EcoT14I	CCWWGG	3 cut(s)	1076, 1269, 1704
EgeI	GGCGCC	1 cut(s)	1368
EheI	GGCGCC	1 cut(s)	1368
ErhI	CCWWGG	3 cut(s)	1076, 1269, 1704
Esp3I	CGTCTC	1 cut(s)	1964
FaeI	CATG	9 cut(s)	308, 518, 611, 619, 1090, 1463, 1618, 1894, 2087
FalI	AAGNNNNNCTT	1 cut(s)	2189
FaqI	GGGAC	3 cut(s)	160, 241, 1646
FatI	CATG	9 cut(s)	304, 514, 607, 615, 1086, 1459, 1614, 1890, 2083
FauI	CCCGC	1 cut(s)	891
FauNDI	CATATG	1 cut(s)	1879
FblI	GTMKAC	3 cut(s)	414, 1343, 2202
Fnu4HI	GCNGC	8 cut(s)	134, 159, 405, 477, 650, 729, 798, 2145
FokI	GGATG	2 cut(s)	485, 914
Fsp4HI	GCNGC	8 cut(s)	134, 159, 405, 477, 650, 729, 798, 2145
FspBI	CTAG	5 cut(s)	612, 662, 1077, 1095, 2114
GlaI	GCGC	2 cut(s)	157, 1368
GluI	GCNGC	8 cut(s)	134, 159, 405, 477, 650, 729, 798, 2145
GsaI	CCCAGC	1 cut(s)	492
GsuI	CTGGAG	1 cut(s)	1764
HaeII	RGCGCY	2 cut(s)	159, 1370
HaeIII	GGCC	5 cut(s)	47, 283, 779, 962, 1544
HapII	CCGG	1 cut(s)	434
HhaI	GCGC	2 cut(s)	158, 1369
Hin1I	GRCGYC	1 cut(s)	1367
Hin1II	CATG	9 cut(s)	308, 518, 611, 619, 1090, 1463, 1618, 1894, 2087
Hin6I	GCGC	2 cut(s)	156, 1367
HinP1I	GCGC	2 cut(s)	156, 1367
HincII	GTYRAC	1 cut(s)	2128
HindII	GTYRAC	1 cut(s)	2128
HindIII	AAGCTT	1 cut(s)	2030
HinfI	GANTC	6 cut(s)	89, 394, 546, 1478, 1667, 1934
HpaI	GTTAAC	1 cut(s)	2128
HpaII	CCGG	1 cut(s)	434
HphI	GGTGA	7 cut(s)	1183, 1367, 1444, 1921, 1948, 2009, 2066
Hpy166II	GTNNAC	8 cut(s)	415, 763, 1031, 1344, 1612, 2119, 2128, 2203
Hpy188I	TCNGA	7 cut(s)	229, 370, 375, 1160, 1287, 1597, 1939
Hpy188III	TCNNGA	8 cut(s)	515, 640, 836, 968, 1045, 1192, 1223, 1967
Hpy8I	GTNNAC	8 cut(s)	415, 763, 1031, 1344, 1612, 2119, 2128, 2203
HpyAV	CCTTC	9 cut(s)	272, 637, 794, 811, 952, 974, 1423, 1429, 1789
HpyCH4III	ACNGT	5 cut(s)	65, 714, 1003, 2123, 2132
HpyCH4IV	ACGT	2 cut(s)	993, 1322
HpyF10VI	GCNNNNNNNGC	6 cut(s)	158, 485, 633, 1874, 2038, 2047
HpyF3I	CTNAG	9 cut(s)	503, 824, 837, 1139, 1548, 1596, 1626, 1650, 1904
HpySE526I	ACGT	2 cut(s)	993, 1322
Hsp92I	GRCGYC	1 cut(s)	1367
Hsp92II	CATG	9 cut(s)	308, 518, 611, 619, 1090, 1463, 1618, 1894, 2087
HspAI	GCGC	2 cut(s)	156, 1367
KasI	GGCGCC	1 cut(s)	1366
KpnI	GGTACC	1 cut(s)	950
KspAI	GTTAAC	1 cut(s)	2128
LguI	GCTCTTC	1 cut(s)	2061
LmnI	GCTCC	7 cut(s)	928, 1072, 1241, 1720, 1783, 2038, 2080
Lsp1109I	GCAGC	8 cut(s)	145, 145, 416, 488, 661, 740, 784, 2131
LweI	GCATC	8 cut(s)	463, 961, 1216, 1567, 1612, 1690, 1702, 2047
MaeI	CTAG	5 cut(s)	612, 662, 1077, 1095, 2114
MaeII	ACGT	2 cut(s)	993, 1322
MaeIII	GTNAC	5 cut(s)	271, 1519, 1907, 1927, 2132
MbiI	CCGCTC	1 cut(s)	1244
MfeI	CAATTG	2 cut(s)	578, 1329
MflI	RGATCY	3 cut(s)	229, 1313, 2096
MhlI	GDGCHC	4 cut(s)	81, 925, 1123, 1634
MluI	ACGCGT	1 cut(s)	937
Mly113I	GGCGCC	1 cut(s)	1367
MlyI	GAGTC	4 cut(s)	98, 1487, 1676, 1928
MmeI	TCCRAC	1 cut(s)	193
MseI	TTAA	7 cut(s)	399, 738, 863, 894, 1731, 2043, 2127
MslI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
MspA1I	CMGCKG	2 cut(s)	136, 652
MspCI	CTTAAG	1 cut(s)	2042
MspI	CCGG	1 cut(s)	434
MspR9I	CCNGG	3 cut(s)	1111, 1207, 1919
MunI	CAATTG	2 cut(s)	578, 1329
Mva1269I	GAATGC	2 cut(s)	775, 1096
MvaI	CCWGG	3 cut(s)	1111, 1207, 1919
MvnI	CGCG	1 cut(s)	939
MwoI	GCNNNNNNNGC	6 cut(s)	158, 485, 633, 1874, 2038, 2047
NarI	GGCGCC	1 cut(s)	1367
NdeI	CATATG	1 cut(s)	1879
NheI	GCTAGC	1 cut(s)	611
NlaIII	CATG	9 cut(s)	308, 518, 611, 619, 1090, 1463, 1618, 1894, 2087
NlaIV	GGNNCC	9 cut(s)	148, 231, 843, 948, 1074, 1368, 1515, 1569, 1779
NmuCI	GTSAC	3 cut(s)	1519, 1907, 1927
NspI	RCATGY	4 cut(s)	611, 619, 1618, 2087
PaeI	GCATGC	3 cut(s)	611, 619, 2087
PagI	TCATGA	1 cut(s)	514
PciSI	GCTCTTC	1 cut(s)	2061
PcsI	WCGNNNNNNNCGW	1 cut(s)	2175
PctI	GAATGC	2 cut(s)	775, 1096
PfeI	GAWTC	2 cut(s)	394, 546
PflMI	CCANNNNNTGG	1 cut(s)	352
PfoI	TCCNGGA	1 cut(s)	1205
PkrI	GCNGC	8 cut(s)	135, 160, 406, 478, 651, 730, 799, 2146
PleI	GAGTC	4 cut(s)	97, 1486, 1675, 1928
PluTI	GGCGCC	1 cut(s)	1370
PpsI	GAGTC	4 cut(s)	97, 1486, 1675, 1928
Psp1406I	AACGTT	1 cut(s)	993
Psp6I	CCWGG	3 cut(s)	1109, 1205, 1917
PspFI	CCCAGC	1 cut(s)	488
PspGI	CCWGG	3 cut(s)	1109, 1205, 1917
PspN4I	GGNNCC	9 cut(s)	148, 231, 843, 948, 1074, 1368, 1515, 1569, 1779
PspPI	GGNCC	4 cut(s)	147, 281, 961, 1397
PstI	CTGCAG	2 cut(s)	1128, 2149
PstNI	CAGNNNCTG	2 cut(s)	158, 530
PsuI	RGATCY	3 cut(s)	229, 1313, 2096
PvuII	CAGCTG	1 cut(s)	652
RsaI	GTAC	6 cut(s)	711, 749, 948, 1032, 1384, 1916
RsaNI	GTAC	6 cut(s)	710, 748, 947, 1031, 1383, 1915
RseI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
SapI	GCTCTTC	1 cut(s)	2061
SaqAI	TTAA	7 cut(s)	399, 738, 863, 894, 1731, 2043, 2127
SatI	GCNGC	8 cut(s)	134, 159, 405, 477, 650, 729, 798, 2145
Sau96I	GGNCC	4 cut(s)	147, 281, 961, 1397
ScaI	AGTACT	1 cut(s)	711
SchI	GAGTC	4 cut(s)	98, 1487, 1676, 1928
ScrFI	CCNGG	3 cut(s)	1111, 1207, 1919
SduI	GDGCHC	4 cut(s)	81, 925, 1123, 1634
SfaNI	GCATC	8 cut(s)	463, 961, 1216, 1567, 1612, 1690, 1702, 2047
SfcI	CTRYAG	3 cut(s)	522, 1124, 2145
SfoI	GGCGCC	1 cut(s)	1368
SinI	GGWCC	2 cut(s)	147, 1397
SmiMI	CAYNNNNRTG	3 cut(s)	1550, 1748, 2178
SmlI	CTYRAG	2 cut(s)	2033, 2042
SmoI	CTYRAG	2 cut(s)	2033, 2042
SpeI	ACTAGT	1 cut(s)	2113
SphI	GCATGC	3 cut(s)	611, 619, 2087
SsiI	CCGC	4 cut(s)	136, 150, 898, 1244
SspDI	GGCGCC	1 cut(s)	1366
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	5 cut(s)	612, 662, 1077, 1095, 2114
StyD4I	CCNGG	3 cut(s)	1109, 1205, 1917
StyI	CCWWGG	3 cut(s)	1076, 1269, 1704
TaaI	ACNGT	5 cut(s)	65, 714, 1003, 2123, 2132
TaiI	ACGT	2 cut(s)	996, 1325
TaqI	TCGA	6 cut(s)	69, 793, 969, 1193, 2169, 2178
TatI	WGTACW	3 cut(s)	709, 747, 1382
TfiI	GAWTC	2 cut(s)	394, 546
Tru1I	TTAA	7 cut(s)	399, 738, 863, 894, 1731, 2043, 2127
Tru9I	TTAA	7 cut(s)	399, 738, 863, 894, 1731, 2043, 2127
TscAI	CASTG	4 cut(s)	451, 1133, 1579, 1639
TseFI	GTSAC	3 cut(s)	1519, 1907, 1927
TseI	GCWGC	8 cut(s)	133, 158, 404, 476, 649, 728, 797, 2144
Tsp45I	GTSAC	3 cut(s)	1519, 1907, 1927
TspGWI	ACGGA	2 cut(s)	285, 1988
TspRI	CASTG	4 cut(s)	451, 1133, 1579, 1639
Van91I	CCANNNNNTGG	1 cut(s)	352
Vha464I	CTTAAG	1 cut(s)	2042
VpaK11BI	GGWCC	2 cut(s)	147, 1397
XapI	RAATTY	7 cut(s)	221, 429, 734, 905, 1453, 1922, 2165
XceI	RCATGY	4 cut(s)	611, 619, 1618, 2087
XcmI	CCANNNNNNNNNTGG	1 cut(s)	349
XmaJI	CCTAGG	1 cut(s)	1076
XmiI	GTMKAC	3 cut(s)	414, 1343, 2202
XspI	CTAG	5 cut(s)	612, 662, 1077, 1095, 2114
ZrmI	AGTACT	1 cut(s)	711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.