Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0007108

Physical Location & Seq

Genomic Coordinates Reverse (-)

3607385 .. 3614060

Gene Structure 6676 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022553

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGTCGTCAGGAGGGAGCAGTAGGAGTAGAGGAGGAGGAGAGAAGAGCGGCGTCGGTGTGGTGGTGCCGTCGAGCTCACGCTTCGTAACTCAGACGGTGAACGGCTCCCACCAGTTCCTCATCAAAGGCTACTCTCTCGCCAAAGGCATCGGCGTCGGAAAACACATTGCCAGCGAGAATTTCACCATCGGCGGTTACCAGTGGGCCATCTACTTCTACCCCGACGGCAAAAACCCCGAGGACAACTCCGCCTACGTTTCCGTCTTCATTGCCCTCGCCAGTGAAGGCACCGATGTCCGAGCCCTCTTCGAGTTGACCCTCCTCGATCAGGGCCCCGACGCCAAGCACAAGGTCCATTCCCATTTCGATCGATCCCTCGAGAGCGGGCCCTACACTCTCAAGTACAGAGGCAGCATGTGGGGCTACAAACGCTTTTACCGACGCACCATGCTTGAATCCTCCACCTTCCTCAAGGATGATTGCCTCAAAATTAACTGCACCGTCGGCGTTGTGGTTTCTGCCATTGATAGTTCCAGACTCCACTCCATTGATGTCCCCGACTCTGACATCGGAGCACATTTCGGTATGTTTTTGGAGAATGGGGAAGGCTCTGATGTTACTTTCAATGTCTCCGGGGTTAAGTTTCCTGCTCACAAGCTTGTATTGGCTGCTCGTTCCCCCGAATTCGAGAATGAGTTCTTTAATGGACTCGAAGAGGACAATCAGGAGATAATGGTCGACGATATGGAGCCCAAAGTCTTTAAGGCTTTGCTGCACTTCTTATATACAGATAATCTTGTCGAGGATGAGGAGTTGTCAGAGTCAAGTTCATCTTGCATGCATTCTTTATCCGACATATTAGCTGCAAAGTTGCTAGCTGCGGCAGACAAATATGGCTTAACAAGGCTTCGACTCATGTGTGAATCTGTTCTCTGCAAGGATATAGCTGTCAATTCTGTTGCCAATATCCTTGCCTTAGCTGATCGCTATTCTGCTGTCGAACTAAAATCTGTTTGCCTAAAATTTGCTGCTGAAAATCTAGTCGCTGTCATGGAAACGGATGGTTTTGAGTTGCTCAAGGAAAACTGTCCACTGCTGCAGTCAGAGCTTCTGAAGACAGTTGCAGGAAGTGAGGAGGAACTAAGCGGAGGGGGAAAGAGTCAAAGCGTATGGGCGCAGTTTTCAGATGGTGGGAATTCAAATGATAGACGTACAAGACAACAGACCCTGCAAAATGGAGAGAGAGGTCAGAGAATTTGGGTCCAGTCTTTGGATGGCAGTGATGCTAGAGGAATGAGTCCTGGGCAAGAAGCAAGCCTCAAGGTCGAAGAGAAGTTGGAGAAAAAAGAAAGTGTCGGGATGGACATCAGGCGTGTTAAGTTGCCCGCACCACAAGGAAGGAAATCCACAAAGAAGTTGAAACTGACTGAGGGCAGTACCGGAAGTGCCCGCAACGGATTTGAGAATGTTTGCAGCGAGGCTGAATCCAGTCGCGGCCACAAGGAAGCTTCAAAATCACTCTCCCTGCCTCAAACCAATCTCCTGAATTCACCACGCAAGTCACTCACCTTCCCAAAGGGTGATGACTCTTACGTGCTGGAGGGTGACCCAATTGCGTTCGACAAAGAGGCATGTTTGGTGGTGCCGCAAGACTTGGCCTTGAATGACGTTGACCGGGAGAAGCTTTCTGATTTGACCATGAAAGATATCTCGGCTCAGATTTCTCGAGGCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009987 GO:0009991 GO:0010035 GO:0031668 GO:0033554 GO:0042221 GO:0042631 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071470 GO:0071472 GO:0071496 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04340 ko04341 map04340 map04341

Pfam Domains

Protein Families

BTB MATH

Protein Analysis

579

Amino Acids

63.16

Weight (kDa)

5.44

Isoelectric Point (pI)

42.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	37 - 168	3.3e-29	MATH domain
BTB	PF00651	196 - 313	1.1e-21	BTB/POZ domain
BACK_BPM_SPOP	PF24570	319 - 371	3.8e-17	BPM/SPOP, BACK domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007108)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03740 AT3G43700 AT3G43700 AT3G43700 AT5G21010
fragaria_vesca	FvH4_1g28561 FvH4_1g28561 FvH4_1g28561
malus_domestica	MD12G1010200.v1.1 MD14G1007300.v1.1
prunus_persica	Prupe.7G012100_v2.0.a1
pyrus_communis	pycom12g00790 pycom14g00590 pycom14g00600
rosa_chinensis	RchiOBHm_Chr3g0496191
rosa_laevigata	RLG00000022553
rosa_multiflora	Rmu_co8262413.1_g000001 Rmu_sc0006695.1_g000008
rosa_roxburghii	Rroxscaffold_6G00389480
rosa_rugosa	Rorug03G0280400
rosa_samantha	Rh3AG327200 Rh3BG363400 Rh3CG360100 Rh3DG363300
rosa_wichuraiana	Rw3G028680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	64, 287, 1642
AccB7I	CCANNNNNTGG	1 cut(s)	1270
AccBSI	CCGCTC	2 cut(s)	48, 384
AccI	GTMKAC	1 cut(s)	738
AccII	CGCG	1 cut(s)	1494
AclWI	GGATC	1 cut(s)	366
AcoI	YGGCCR	1 cut(s)	1495
AcsI	RAATTY	6 cut(s)	178, 683, 1022, 1195, 1254, 1546
AcuI	CTGAAG	1 cut(s)	1133
AcyI	GRCGYC	3 cut(s)	51, 153, 339
AfaI	GTAC	3 cut(s)	404, 1213, 1438
AfiI	CCNNNNNNNGG	2 cut(s)	328, 1270
AgsI	TTSAA	6 cut(s)	455, 625, 1200, 1420, 1512, 1663
AjnI	CCWGG	1 cut(s)	1300
AluBI	AGCT	9 cut(s)	75, 658, 863, 878, 947, 980, 1108, 1508, 1684
AluI	AGCT	9 cut(s)	75, 658, 863, 878, 947, 980, 1108, 1508, 1684
Alw21I	GWGCWC	2 cut(s)	77, 577
Alw26I	GTCTC	1 cut(s)	634
AlwI	GGATC	1 cut(s)	366
AlwNI	CAGNNNCTG	1 cut(s)	1228
Ama87I	CYCGRG	3 cut(s)	236, 377, 1725
AoxI	GGCC	5 cut(s)	204, 331, 386, 1495, 1656
ApaI	GGGCCC	2 cut(s)	335, 390
ApeKI	GCWGC	8 cut(s)	411, 668, 772, 863, 878, 1028, 1096, 1473
ApoI	RAATTY	6 cut(s)	178, 683, 1022, 1195, 1254, 1546
Asp700I	GAANNNNTTC	2 cut(s)	695, 927
AspLEI	GCGC	1 cut(s)	1177
AspS9I	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
AsuC2I	CCSGG	2 cut(s)	634, 1676
AsuHPI	GGTGA	6 cut(s)	109, 175, 1542, 1558, 1592, 1616
AsuNHI	GCTAGC	1 cut(s)	874
AvaI	CYCGRG	3 cut(s)	236, 377, 1725
AvaII	GGWCC	2 cut(s)	352, 1261
BaeGI	GKGCMC	3 cut(s)	335, 390, 1450
BanI	GGYRCC	3 cut(s)	64, 287, 1642
BanII	GRGCYC	5 cut(s)	77, 304, 335, 390, 753
BbsI	GAAGAC	2 cut(s)	256, 1121
Bbv12I	GWGCWC	2 cut(s)	77, 577
BbvI	GCAGC	8 cut(s)	423, 655, 759, 850, 865, 1015, 1083, 1485
BccI	CCATC	6 cut(s)	194, 215, 1055, 1181, 1268, 1354
BceAI	ACGGC	3 cut(s)	52, 118, 241
BcgI	CGANNNNNNTGC	2 cut(s)	136, 170
BciT130I	CCWGG	1 cut(s)	1302
BcnI	CCSGG	2 cut(s)	634, 1676
BcoDI	GTCTC	1 cut(s)	634
BfaI	CTAG	3 cut(s)	875, 1040, 1287
BfmI	CTRYAG	1 cut(s)	1097
Bme1390I	CCNGG	3 cut(s)	634, 1302, 1676
Bme18I	GGWCC	2 cut(s)	352, 1261
BmeT110I	CYCGRG	3 cut(s)	236, 377, 1725
BmgT120I	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
BmiI	GGNNCC	9 cut(s)	66, 106, 289, 333, 334, 388, 750, 1262, 1644
BmrFI	CCNGG	3 cut(s)	634, 1302, 1676
BmsI	GCATC	2 cut(s)	156, 1273
BmtI	GCTAGC	1 cut(s)	878
BpiI	GAAGAC	2 cut(s)	256, 1121
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpmI	CTGGAG	1 cut(s)	1619
Bpu10I	CCTNAGC	1 cut(s)	976
BpuEI	CTTGAG	4 cut(s)	383, 455, 1061, 1304
BpuMI	CCSGG	2 cut(s)	634, 1676
Bsa29I	ATCGAT	1 cut(s)	370
BsaAI	YACGTR	1 cut(s)	1594
BsaBI	GATNNNNATC	1 cut(s)	1364
BsaHI	GRCGYC	3 cut(s)	51, 153, 339
BsaJI	CCNNGG	3 cut(s)	237, 633, 1301
BsaWI	WCCGGW	1 cut(s)	1439
Bsc4I	CCNNNNNNNGG	2 cut(s)	328, 1270
Bse1I	ACTGG	5 cut(s)	112, 199, 279, 1264, 1488
Bse3DI	GCAATG	2 cut(s)	165, 267
Bse8I	GATNNNNATC	1 cut(s)	1364
BseBI	CCWGG	1 cut(s)	1302
BseCI	ATCGAT	1 cut(s)	370
BseDI	CCNNGG	3 cut(s)	237, 633, 1301
BseGI	GGATG	5 cut(s)	481, 811, 1066, 1279, 1365
BseJI	GATNNNNATC	1 cut(s)	1364
BseLI	CCNNNNNNNGG	2 cut(s)	328, 1270
BseMI	GCAATG	2 cut(s)	165, 267
BseMII	CTCAG	3 cut(s)	104, 1419, 1730
BseNI	ACTGG	5 cut(s)	112, 199, 279, 1264, 1488
BseRI	GAGGAG	6 cut(s)	45, 48, 51, 311, 824, 1148
BseSI	GKGCMC	3 cut(s)	335, 390, 1450
BseXI	GCAGC	8 cut(s)	423, 655, 759, 850, 865, 1015, 1083, 1485
BsgI	GTGCAG	2 cut(s)	481, 758
Bsh1236I	CGCG	1 cut(s)	1494
Bsh1285I	CGRYCG	1 cut(s)	370
BshFI	GGCC	5 cut(s)	206, 333, 388, 1497, 1658
BshNI	GGYRCC	3 cut(s)	64, 287, 1642
BshVI	ATCGAT	1 cut(s)	370
BsiEI	CGRYCG	1 cut(s)	370
BsiHKAI	GWGCWC	2 cut(s)	77, 577
BsiHKCI	CYCGRG	3 cut(s)	236, 377, 1725
BsiSI	CCGG	3 cut(s)	633, 1440, 1675
BslFI	GGGAC	1 cut(s)	539
BslI	CCNNNNNNNGG	2 cut(s)	328, 1270
BsmAI	GTCTC	1 cut(s)	634
BsmFI	GGGAC	1 cut(s)	539
BsmI	GAATGC	1 cut(s)	841
BsnI	GGCC	5 cut(s)	206, 333, 388, 1497, 1658
BsoBI	CYCGRG	3 cut(s)	236, 377, 1725
Bsp120I	GGGCCC	2 cut(s)	331, 386
Bsp1286I	GDGCHC	7 cut(s)	77, 304, 335, 390, 577, 753, 1450
Bsp143I	GATC	4 cut(s)	325, 367, 371, 982
BspANI	GGCC	5 cut(s)	206, 333, 388, 1497, 1658
BspCNI	CTCAG	3 cut(s)	103, 1420, 1729
BspDI	ATCGAT	1 cut(s)	370
BspFNI	CGCG	1 cut(s)	1494
BspLI	GGNNCC	9 cut(s)	66, 106, 289, 333, 334, 388, 750, 1262, 1644
BspMAI	CTGCAG	1 cut(s)	1101
BspOI	GCTAGC	1 cut(s)	878
BspPI	GGATC	1 cut(s)	366
BspQI	GCTCTTC	1 cut(s)	38
BspT107I	GGYRCC	3 cut(s)	64, 287, 1642
BsrBI	CCGCTC	2 cut(s)	48, 384
BsrDI	GCAATG	2 cut(s)	165, 267
BsrI	ACTGG	5 cut(s)	112, 199, 279, 1264, 1488
BssECI	CCNNGG	3 cut(s)	237, 633, 1301
BssMI	GATC	4 cut(s)	325, 367, 371, 982
BssNI	GRCGYC	3 cut(s)	51, 153, 339
Bst2UI	CCWGG	1 cut(s)	1302
Bst4CI	ACNGT	4 cut(s)	97, 502, 1088, 1120
Bst6I	CTCTTC	4 cut(s)	38, 311, 708, 1323
BstACI	GRCGYC	3 cut(s)	51, 153, 339
BstBAI	YACGTR	1 cut(s)	1594
BstC8I	GCNNGC	7 cut(s)	172, 386, 839, 876, 1315, 1386, 1450
BstDEI	CTNAG	5 cut(s)	90, 976, 1142, 1428, 1716
BstEII	GGTNACC	2 cut(s)	194, 1604
BstENI	CCTNNNNNAGG	1 cut(s)	326
BstF5I	GGATG	5 cut(s)	481, 811, 1066, 1279, 1365
BstFNI	CGCG	1 cut(s)	1494
BstHHI	GCGC	1 cut(s)	1177
BstKTI	GATC	4 cut(s)	328, 370, 374, 985
BstMAI	GTCTC	1 cut(s)	634
BstMBI	GATC	4 cut(s)	325, 367, 371, 982
BstMCI	CGRYCG	1 cut(s)	370
BstMWI	GCNNNNNNNGC	4 cut(s)	420, 429, 504, 1105
BstNI	CCWGG	1 cut(s)	1302
BstNSI	RCATGY	3 cut(s)	418, 841, 1635
BstPI	GGTNACC	2 cut(s)	194, 1604
BstSCI	CCNGG	3 cut(s)	632, 1300, 1674
BstSFI	CTRYAG	1 cut(s)	1097
BstSLI	GKGCMC	3 cut(s)	335, 390, 1450
BstUI	CGCG	1 cut(s)	1494
BstV1I	GCAGC	8 cut(s)	423, 655, 759, 850, 865, 1015, 1083, 1485
BstV2I	GAAGAC	2 cut(s)	256, 1121
Bsu15I	ATCGAT	1 cut(s)	370
BsuRI	GGCC	5 cut(s)	206, 333, 388, 1497, 1658
BsuTUI	ATCGAT	1 cut(s)	370
BtsCI	GGATG	5 cut(s)	481, 811, 1066, 1279, 1365
BtsI	GCAGTG	2 cut(s)	1091, 1285
BtsIMutI	CAGTG	4 cut(s)	206, 286, 1091, 1285
Cac8I	GCNNGC	7 cut(s)	172, 386, 839, 876, 1315, 1386, 1450
CaiI	CAGNNNCTG	1 cut(s)	1228
CfoI	GCGC	1 cut(s)	1177
Cfr13I	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
ClaI	ATCGAT	1 cut(s)	370
CseI	GACGC	4 cut(s)	40, 142, 347, 450
Csp6I	GTAC	3 cut(s)	403, 1212, 1437
CviAII	CATG	7 cut(s)	415, 448, 838, 916, 1051, 1632, 1699
CviQI	GTAC	3 cut(s)	403, 1212, 1437
DdeI	CTNAG	5 cut(s)	90, 976, 1142, 1428, 1716
DpnI	GATC	4 cut(s)	327, 369, 373, 984
DpnII	GATC	4 cut(s)	325, 367, 371, 982
EaeI	YGGCCR	1 cut(s)	1495
Eam1104I	CTCTTC	4 cut(s)	38, 311, 708, 1323
EarI	CTCTTC	4 cut(s)	38, 311, 708, 1323
EciI	GGCGGA	1 cut(s)	238
Ecl136II	GAGCTC	1 cut(s)	75
Eco24I	GRGCYC	5 cut(s)	77, 304, 335, 390, 753
Eco32I	GATATC	1 cut(s)	1708
Eco47I	GGWCC	2 cut(s)	352, 1261
Eco53kI	GAGCTC	1 cut(s)	75
Eco57I	CTGAAG	1 cut(s)	1133
Eco88I	CYCGRG	3 cut(s)	236, 377, 1725
Eco91I	GGTNACC	2 cut(s)	194, 1604
EcoICRI	GAGCTC	1 cut(s)	75
EcoNI	CCTNNNNNAGG	1 cut(s)	326
EcoO109I	RGGNCCY	3 cut(s)	331, 332, 387
EcoO65I	GGTNACC	2 cut(s)	194, 1604
EcoRI	GAATTC	3 cut(s)	683, 1195, 1546
EcoRII	CCWGG	1 cut(s)	1300
EcoRV	GATATC	1 cut(s)	1708
EcoT22I	ATGCAT	1 cut(s)	843
EcoT38I	GRGCYC	5 cut(s)	77, 304, 335, 390, 753
FaeI	CATG	7 cut(s)	418, 451, 841, 919, 1054, 1635, 1702
FalI	AAGNNNNNCTT	2 cut(s)	817, 849
FaqI	GGGAC	1 cut(s)	539
FatI	CATG	7 cut(s)	414, 447, 837, 915, 1050, 1631, 1698
FauI	CCCGC	3 cut(s)	377, 1393, 1457
FblI	GTMKAC	1 cut(s)	738
FokI	GGATG	5 cut(s)	488, 818, 1073, 1286, 1372
FriOI	GRGCYC	5 cut(s)	77, 304, 335, 390, 753
FspBI	CTAG	3 cut(s)	875, 1040, 1287
GlaI	GCGC	1 cut(s)	1176
GsuI	CTGGAG	1 cut(s)	1619
HaeIII	GGCC	5 cut(s)	206, 333, 388, 1497, 1658
HapII	CCGG	3 cut(s)	633, 1440, 1675
HgaI	GACGC	4 cut(s)	40, 142, 347, 450
HhaI	GCGC	1 cut(s)	1177
Hin1I	GRCGYC	3 cut(s)	51, 153, 339
Hin1II	CATG	7 cut(s)	418, 451, 841, 919, 1054, 1635, 1702
Hin6I	GCGC	1 cut(s)	1175
HinP1I	GCGC	1 cut(s)	1175
HincII	GTYRAC	3 cut(s)	315, 739, 1672
HindII	GTYRAC	3 cut(s)	315, 739, 1672
HindIII	AAGCTT	3 cut(s)	656, 1506, 1682
HpaII	CCGG	3 cut(s)	633, 1440, 1675
HphI	GGTGA	6 cut(s)	109, 175, 1542, 1558, 1592, 1616
Hpy166II	GTNNAC	5 cut(s)	100, 315, 739, 1091, 1672
Hpy188III	TCNNGA	8 cut(s)	9, 379, 534, 688, 725, 1357, 1543, 1725
Hpy8I	GTNNAC	5 cut(s)	100, 315, 739, 1091, 1672
Hpy99I	CGWCG	8 cut(s)	56, 73, 158, 227, 341, 444, 506, 743
HpyAV	CCTTC	5 cut(s)	278, 475, 599, 1392, 1579
HpyCH4III	ACNGT	4 cut(s)	97, 502, 1088, 1120
HpyCH4IV	ACGT	4 cut(s)	255, 1210, 1593, 1668
HpyF10VI	GCNNNNNNNGC	4 cut(s)	420, 429, 504, 1105
HpyF3I	CTNAG	5 cut(s)	90, 976, 1142, 1428, 1716
HpySE526I	ACGT	4 cut(s)	255, 1210, 1593, 1668
Hsp92I	GRCGYC	3 cut(s)	51, 153, 339
Hsp92II	CATG	7 cut(s)	418, 451, 841, 919, 1054, 1635, 1702
HspAI	GCGC	1 cut(s)	1175
Kzo9I	GATC	4 cut(s)	325, 367, 371, 982
LguI	GCTCTTC	1 cut(s)	38
LmnI	GCTCC	4 cut(s)	15, 110, 572, 748
Lsp1109I	GCAGC	8 cut(s)	423, 655, 759, 850, 865, 1015, 1083, 1485
LweI	GCATC	2 cut(s)	156, 1273
MaeI	CTAG	3 cut(s)	875, 1040, 1287
MaeII	ACGT	4 cut(s)	255, 1210, 1593, 1668
MaeIII	GTNAC	5 cut(s)	85, 194, 616, 1560, 1604
MalI	GATC	4 cut(s)	327, 369, 373, 984
MbiI	CCGCTC	2 cut(s)	48, 384
MboI	GATC	4 cut(s)	325, 367, 371, 982
MboII	GAAGA	6 cut(s)	55, 256, 298, 725, 1126, 1340
MfeI	CAATTG	1 cut(s)	1611
MhlI	GDGCHC	7 cut(s)	77, 304, 335, 390, 577, 753, 1450
MluCI	AATT	9 cut(s)	178, 489, 683, 952, 1022, 1195, 1254, 1546, 1611
MlyI	GAGTC	8 cut(s)	531, 554, 702, 830, 906, 1168, 1306, 1580
MmeI	TCCRAC	3 cut(s)	136, 876, 1317
Mph1103I	ATGCAT	1 cut(s)	843
MroXI	GAANNNNTTC	2 cut(s)	695, 927
MseI	TTAA	6 cut(s)	492, 639, 702, 762, 899, 1377
MspI	CCGG	3 cut(s)	633, 1440, 1675
MspR9I	CCNGG	3 cut(s)	634, 1302, 1676
MunI	CAATTG	1 cut(s)	1611
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	1 cut(s)	1302
MvnI	CGCG	1 cut(s)	1494
MwoI	GCNNNNNNNGC	4 cut(s)	420, 429, 504, 1105
NciI	CCSGG	2 cut(s)	634, 1676
NdeII	GATC	4 cut(s)	325, 367, 371, 982
NheI	GCTAGC	1 cut(s)	874
NlaIII	CATG	7 cut(s)	418, 451, 841, 919, 1054, 1635, 1702
NlaIV	GGNNCC	9 cut(s)	66, 106, 289, 333, 334, 388, 750, 1262, 1644
NmeAIII	GCCGAG	1 cut(s)	1691
NmuCI	GTSAC	2 cut(s)	1560, 1604
NsiI	ATGCAT	1 cut(s)	843
NspI	RCATGY	3 cut(s)	418, 841, 1635
PaeI	GCATGC	1 cut(s)	841
PaeR7I	CTCGAG	2 cut(s)	377, 1725
PciSI	GCTCTTC	1 cut(s)	38
PcsI	WCGNNNNNNNCGW	1 cut(s)	436
PctI	GAATGC	1 cut(s)	841
PdmI	GAANNNNTTC	2 cut(s)	695, 927
PfeI	GAWTC	3 cut(s)	455, 923, 1484
PflMI	CCANNNNNTGG	1 cut(s)	1270
Ple19I	CGATCG	1 cut(s)	370
PleI	GAGTC	8 cut(s)	531, 554, 702, 829, 906, 1167, 1305, 1580
PpsI	GAGTC	8 cut(s)	531, 554, 702, 829, 906, 1167, 1305, 1580
Ppu21I	YACGTR	1 cut(s)	1594
Psp124BI	GAGCTC	1 cut(s)	77
Psp6I	CCWGG	1 cut(s)	1300
PspEI	GGTNACC	2 cut(s)	194, 1604
PspGI	CCWGG	1 cut(s)	1300
PspN4I	GGNNCC	9 cut(s)	66, 106, 289, 333, 334, 388, 750, 1262, 1644
PspOMI	GGGCCC	2 cut(s)	331, 386
PspPI	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
PstI	CTGCAG	1 cut(s)	1101
PstNI	CAGNNNCTG	1 cut(s)	1228
PvuI	CGATCG	1 cut(s)	370
RsaI	GTAC	3 cut(s)	404, 1213, 1438
RsaNI	GTAC	3 cut(s)	403, 1212, 1437
SacI	GAGCTC	1 cut(s)	77
SalI	GTCGAC	1 cut(s)	737
SapI	GCTCTTC	1 cut(s)	38
SaqAI	TTAA	6 cut(s)	492, 639, 702, 762, 899, 1377
Sau3AI	GATC	4 cut(s)	325, 367, 371, 982
Sau96I	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
SchI	GAGTC	8 cut(s)	531, 554, 702, 830, 906, 1168, 1306, 1580
ScrFI	CCNGG	3 cut(s)	634, 1302, 1676
SduI	GDGCHC	7 cut(s)	77, 304, 335, 390, 577, 753, 1450
SfaNI	GCATC	2 cut(s)	156, 1273
SfcI	CTRYAG	1 cut(s)	1097
Sfr274I	CTCGAG	2 cut(s)	377, 1725
SinI	GGWCC	2 cut(s)	352, 1261
SlaI	CTCGAG	2 cut(s)	377, 1725
SmlI	CTYRAG	6 cut(s)	377, 398, 470, 1076, 1319, 1725
SmoI	CTYRAG	6 cut(s)	377, 398, 470, 1076, 1319, 1725
SphI	GCATGC	1 cut(s)	841
Sse9I	AATT	9 cut(s)	178, 489, 683, 952, 1022, 1195, 1254, 1546, 1611
SspMI	CTAG	3 cut(s)	875, 1040, 1287
SstI	GAGCTC	1 cut(s)	77
StyD4I	CCNGG	3 cut(s)	632, 1300, 1674
TaaI	ACNGT	4 cut(s)	97, 502, 1088, 1120
TaiI	ACGT	4 cut(s)	258, 1213, 1596, 1671
TasI	AATT	9 cut(s)	178, 489, 683, 952, 1022, 1195, 1254, 1546, 1611
TatI	WGTACW	1 cut(s)	402
TauI	GCSGC	4 cut(s)	51, 884, 1497, 1648
TfiI	GAWTC	3 cut(s)	455, 923, 1484
Tru1I	TTAA	6 cut(s)	492, 639, 702, 762, 899, 1377
Tru9I	TTAA	6 cut(s)	492, 639, 702, 762, 899, 1377
TscAI	CASTG	4 cut(s)	206, 286, 1098, 1285
TseFI	GTSAC	2 cut(s)	1560, 1604
TseI	GCWGC	8 cut(s)	411, 668, 772, 863, 878, 1028, 1096, 1473
Tsp45I	GTSAC	2 cut(s)	1560, 1604
TspDTI	ATGAA	3 cut(s)	256, 819, 1715
TspGWI	ACGGA	3 cut(s)	250, 1073, 1470
TspRI	CASTG	4 cut(s)	206, 286, 1098, 1285
Van91I	CCANNNNNTGG	1 cut(s)	1270
VpaK11BI	GGWCC	2 cut(s)	352, 1261
XagI	CCTNNNNNAGG	1 cut(s)	326
XapI	RAATTY	6 cut(s)	178, 683, 1022, 1195, 1254, 1546
XceI	RCATGY	3 cut(s)	418, 841, 1635
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1271
XhoI	CTCGAG	2 cut(s)	377, 1725
XmiI	GTMKAC	1 cut(s)	738
XmnI	GAANNNNTTC	2 cut(s)	695, 927
XspI	CTAG	3 cut(s)	875, 1040, 1287
Zsp2I	ATGCAT	1 cut(s)	843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.