Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0007108

Physical Location & Seq

Genomic Coordinates Forward (+)

43156824 .. 43162084

Gene Structure 5261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G028680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1317 bp

ATGTCGTCAGGGAGCAGTAGGAGTAGAGGAGGAGGAGGAGAGAAGAGCGGCGTGGGTGTGGTGGTGCCGTCGAGCTCACGCTTCGTGACTCAGACGGTGAACGGCTCCCACCAGTTCCTCATCAAAGGCTACTCTCTCGCCAAAGGCATCGGCGTCGGAAAACACATTGCCAGCGAGAATTTCACCATCGGCGGCTACCAGTGGGCCATCTACTTCTACCCCGACGGCAAAAACCCCGAGGACAACTCCGCCTACGTTTCCGTCTTCATTGCCCTCGCCAGCGAAGGCACCGATGTCCGAGCCCTCTTCGAGTTGACCCTCCTCGATCAGGGCCCCGACGCCAAGCACAAGGTCCATTCCCATTTCGATCGATCCCTCGAGAGCGGGCCCTACACTCTCAAGTACAGAGGCAGCATGTGGGGCTACAAACGCTTTTACCGACGCACCATGCTCGAATCCTCCTCCTTCCTCAAGGACGATTGCCTCAAAATTAACTGCACCGTCGGCGTTGTGGTTTCTGCCATTGATAGTTCCAGACTGCACTCCATTGATGTCCCTGACTCTGACATCGGAGCACATTTCGGTATGTTTTTGGAGAATGGGGAGGGCTCTGATGTTACTTTCAATGTCTCCGGGGTTAAGTTTCCTGCTCACAAGCTCGTATTGGCTGCTCGTTCCCCCGAATTCGAGAATGAGTTCTTTAATGGACTCGAAGAGGACAATCAGGAGATACTGGTCGATGATTTGGAGCCCAAAGTCTTTAAGGCTTTGCTTCACTTCTTATATACAGATAATCTTATTGAGGATGAGGAGTTGTCAGAGTCAAGTTCATCTTGCATGCATTCTTTATCCGACATATTAGCTGCAAAGTTGCTAGCTGCAGCAGACAAATATGGCTTAACAAGGCTTCGACTCATGTGTGAATCTGTTCTCTGCAAGGATATATCTGTTAATTCTGTTGCGAATATCCTTGCCTTAGCCGATCGCTATTCTGCTGTCGAACTAAAATCTGTTTGCCTAAAGTTTGCTGCTGAAAATCTTGTCGCTGTCATGGAAACGGATGGTTTTGAGTTGCTCAAGGAAAACTGTCCACTGCTGCAGTCAGAGCTTCTGAAGACGGTTGCAGGAAGTGAGGAGGAACTAAGCGGAGGGGGAAAGAGTCAAAGTGTATGGGCGCAGTTTTCAGATGGTGGGAATTCCAATGATAGACGTGCAAGACAACAGACCCTGCAAAATGGAGAGAGAGGTCAGAGAATTTGGGTCCAGTCTTTGGATGGCAGTGATGCTAGAGGAATGAGTCCTGGGCAAGAAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009987 GO:0009991 GO:0010035 GO:0031668 GO:0033554 GO:0042221 GO:0042631 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071470 GO:0071472 GO:0071496 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04340 ko04341 map04340 map04341

Pfam Domains

Protein Families

BTB MATH

Protein Analysis

438

Amino Acids

47.78

Weight (kDa)

5.15

Isoelectric Point (pI)

45.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	37 - 168	1.6e-29	MATH domain
BTB	PF00651	196 - 313	2.9e-21	BTB/POZ domain
BACK_BPM_SPOP	PF24570	319 - 371	2.6e-17	BPM/SPOP, BACK domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007108)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03740 AT3G43700 AT3G43700 AT3G43700 AT5G21010
fragaria_vesca	FvH4_1g28561 FvH4_1g28561 FvH4_1g28561
malus_domestica	MD12G1010200.v1.1 MD14G1007300.v1.1
prunus_persica	Prupe.7G012100_v2.0.a1
pyrus_communis	pycom12g00790 pycom14g00590 pycom14g00600
rosa_chinensis	RchiOBHm_Chr3g0496191
rosa_laevigata	RLG00000022553
rosa_multiflora	Rmu_co8262413.1_g000001 Rmu_sc0006695.1_g000008
rosa_roxburghii	Rroxscaffold_6G00389480
rosa_rugosa	Rorug03G0280400
rosa_samantha	Rh3AG327200 Rh3BG363400 Rh3CG360100 Rh3DG363300
rosa_wichuraiana	Rw3G028680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	64, 287
AccB7I	CCANNNNNTGG	1 cut(s)	1270
AccBSI	CCGCTC	2 cut(s)	48, 384
AciI	CCGC	5 cut(s)	48, 192, 249, 384, 1146
AclWI	GGATC	1 cut(s)	366
AcsI	RAATTY	4 cut(s)	178, 683, 1195, 1254
AcuI	CTGAAG	1 cut(s)	1133
AcyI	GRCGYC	2 cut(s)	153, 339
AfaI	GTAC	1 cut(s)	404
AfiI	CCNNNNNNNGG	2 cut(s)	328, 1270
AgsI	TTSAA	1 cut(s)	625
AjiI	CACGTC	1 cut(s)	1211
AjnI	CCWGG	1 cut(s)	1300
AluBI	AGCT	5 cut(s)	75, 658, 863, 878, 1108
AluI	AGCT	5 cut(s)	75, 658, 863, 878, 1108
Alw21I	GWGCWC	2 cut(s)	77, 577
Alw26I	GTCTC	1 cut(s)	634
AlwI	GGATC	1 cut(s)	366
AlwNI	CAGNNNCTG	1 cut(s)	1228
Ama87I	CYCGRG	2 cut(s)	236, 377
AoxI	GGCC	3 cut(s)	204, 331, 386
ApaI	GGGCCC	2 cut(s)	335, 390
ApeKI	GCWGC	7 cut(s)	411, 668, 863, 878, 881, 1028, 1096
ApoI	RAATTY	4 cut(s)	178, 683, 1195, 1254
Asp700I	GAANNNNTTC	2 cut(s)	695, 927
AspLEI	GCGC	1 cut(s)	1177
AspS9I	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
AsuC2I	CCSGG	1 cut(s)	634
AsuHPI	GGTGA	2 cut(s)	109, 175
AsuNHI	GCTAGC	1 cut(s)	874
AvaI	CYCGRG	2 cut(s)	236, 377
AvaII	GGWCC	2 cut(s)	352, 1261
BaeGI	GKGCMC	2 cut(s)	335, 390
BanI	GGYRCC	2 cut(s)	64, 287
BanII	GRGCYC	6 cut(s)	77, 304, 335, 390, 611, 753
BbsI	GAAGAC	2 cut(s)	256, 1121
Bbv12I	GWGCWC	2 cut(s)	77, 577
BbvI	GCAGC	7 cut(s)	423, 655, 850, 865, 893, 1015, 1083
BccI	CCATC	5 cut(s)	194, 215, 1055, 1181, 1268
BceAI	ACGGC	3 cut(s)	52, 118, 241
BcgI	CGANNNNNNTGC	4 cut(s)	136, 170, 433, 467
BciT130I	CCWGG	1 cut(s)	1302
BcnI	CCSGG	1 cut(s)	634
BcoDI	GTCTC	1 cut(s)	634
BfaI	CTAG	2 cut(s)	875, 1287
BfmI	CTRYAG	2 cut(s)	879, 1097
BisI	GCNGC	9 cut(s)	49, 193, 412, 669, 864, 879, 882, 1029, 1097
BlsI	GCNGC	9 cut(s)	50, 194, 413, 670, 865, 880, 883, 1030, 1098
Bme1390I	CCNGG	2 cut(s)	634, 1302
Bme18I	GGWCC	2 cut(s)	352, 1261
BmeT110I	CYCGRG	2 cut(s)	236, 377
BmgBI	CACGTC	1 cut(s)	1211
BmgT120I	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
BmiI	GGNNCC	8 cut(s)	66, 106, 289, 333, 334, 388, 750, 1262
BmrFI	CCNGG	2 cut(s)	634, 1302
BmsI	GCATC	2 cut(s)	156, 1273
BmtI	GCTAGC	1 cut(s)	878
BpiI	GAAGAC	2 cut(s)	256, 1121
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
Bpu10I	CCTNAGC	1 cut(s)	976
BpuEI	CTTGAG	3 cut(s)	383, 455, 1061
BpuMI	CCSGG	1 cut(s)	634
Bsa29I	ATCGAT	1 cut(s)	370
BsaHI	GRCGYC	2 cut(s)	153, 339
BsaJI	CCNNGG	3 cut(s)	237, 633, 1301
Bsc4I	CCNNNNNNNGG	2 cut(s)	328, 1270
Bse1I	ACTGG	4 cut(s)	112, 199, 738, 1264
Bse3DI	GCAATG	2 cut(s)	165, 267
BseBI	CCWGG	1 cut(s)	1302
BseCI	ATCGAT	1 cut(s)	370
BseDI	CCNNGG	3 cut(s)	237, 633, 1301
BseGI	GGATG	3 cut(s)	811, 1066, 1279
BseLI	CCNNNNNNNGG	2 cut(s)	328, 1270
BseMI	GCAATG	2 cut(s)	165, 267
BseMII	CTCAG	1 cut(s)	104
BseNI	ACTGG	4 cut(s)	112, 199, 738, 1264
BseRI	GAGGAG	8 cut(s)	42, 45, 48, 51, 311, 451, 824, 1148
BseSI	GKGCMC	2 cut(s)	335, 390
BseXI	GCAGC	7 cut(s)	423, 655, 850, 865, 893, 1015, 1083
BsgI	GTGCAG	2 cut(s)	481, 524
Bsh1285I	CGRYCG	2 cut(s)	370, 985
BshFI	GGCC	3 cut(s)	206, 333, 388
BshNI	GGYRCC	2 cut(s)	64, 287
BshVI	ATCGAT	1 cut(s)	370
BsiEI	CGRYCG	2 cut(s)	370, 985
BsiHKAI	GWGCWC	2 cut(s)	77, 577
BsiHKCI	CYCGRG	2 cut(s)	236, 377
BsiSI	CCGG	1 cut(s)	633
BslFI	GGGAC	1 cut(s)	539
BslI	CCNNNNNNNGG	2 cut(s)	328, 1270
BsmAI	GTCTC	1 cut(s)	634
BsmFI	GGGAC	1 cut(s)	539
BsmI	GAATGC	1 cut(s)	841
BsnI	GGCC	3 cut(s)	206, 333, 388
BsoBI	CYCGRG	2 cut(s)	236, 377
Bsp120I	GGGCCC	2 cut(s)	331, 386
Bsp1286I	GDGCHC	7 cut(s)	77, 304, 335, 390, 577, 611, 753
Bsp143I	GATC	4 cut(s)	325, 367, 371, 982
BspACI	CCGC	5 cut(s)	48, 192, 249, 384, 1146
BspANI	GGCC	3 cut(s)	206, 333, 388
BspCNI	CTCAG	1 cut(s)	103
BspDI	ATCGAT	1 cut(s)	370
BspLI	GGNNCC	8 cut(s)	66, 106, 289, 333, 334, 388, 750, 1262
BspMAI	CTGCAG	2 cut(s)	883, 1101
BspOI	GCTAGC	1 cut(s)	878
BspPI	GGATC	1 cut(s)	366
BspQI	GCTCTTC	1 cut(s)	38
BspT107I	GGYRCC	2 cut(s)	64, 287
BsrBI	CCGCTC	2 cut(s)	48, 384
BsrDI	GCAATG	2 cut(s)	165, 267
BsrI	ACTGG	4 cut(s)	112, 199, 738, 1264
BssECI	CCNNGG	3 cut(s)	237, 633, 1301
BssMI	GATC	4 cut(s)	325, 367, 371, 982
BssNI	GRCGYC	2 cut(s)	153, 339
Bst2UI	CCWGG	1 cut(s)	1302
Bst4CI	ACNGT	4 cut(s)	97, 502, 1088, 1120
Bst6I	CTCTTC	3 cut(s)	38, 311, 708
BstACI	GRCGYC	2 cut(s)	153, 339
BstC8I	GCNNGC	5 cut(s)	172, 280, 386, 839, 876
BstDEI	CTNAG	3 cut(s)	90, 976, 1142
BstENI	CCTNNNNNAGG	1 cut(s)	326
BstF5I	GGATG	3 cut(s)	811, 1066, 1279
BstHHI	GCGC	1 cut(s)	1177
BstKTI	GATC	4 cut(s)	328, 370, 374, 985
BstMAI	GTCTC	1 cut(s)	634
BstMBI	GATC	4 cut(s)	325, 367, 371, 982
BstMCI	CGRYCG	2 cut(s)	370, 985
BstMWI	GCNNNNNNNGC	4 cut(s)	420, 429, 504, 1105
BstNI	CCWGG	1 cut(s)	1302
BstNSI	RCATGY	2 cut(s)	418, 841
BstSCI	CCNGG	2 cut(s)	632, 1300
BstSFI	CTRYAG	2 cut(s)	879, 1097
BstSLI	GKGCMC	2 cut(s)	335, 390
BstV1I	GCAGC	7 cut(s)	423, 655, 850, 865, 893, 1015, 1083
BstV2I	GAAGAC	2 cut(s)	256, 1121
Bsu15I	ATCGAT	1 cut(s)	370
BsuRI	GGCC	3 cut(s)	206, 333, 388
BsuTUI	ATCGAT	1 cut(s)	370
BtrI	CACGTC	1 cut(s)	1211
BtsCI	GGATG	3 cut(s)	811, 1066, 1279
BtsI	GCAGTG	2 cut(s)	1091, 1285
BtsIMutI	CAGTG	3 cut(s)	206, 1091, 1285
Cac8I	GCNNGC	5 cut(s)	172, 280, 386, 839, 876
CaiI	CAGNNNCTG	1 cut(s)	1228
CfoI	GCGC	1 cut(s)	1177
Cfr13I	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
ClaI	ATCGAT	1 cut(s)	370
CseI	GACGC	3 cut(s)	142, 347, 450
Csp6I	GTAC	1 cut(s)	403
CviAII	CATG	5 cut(s)	415, 448, 838, 916, 1051
CviQI	GTAC	1 cut(s)	403
DdeI	CTNAG	3 cut(s)	90, 976, 1142
DpnI	GATC	4 cut(s)	327, 369, 373, 984
DpnII	GATC	4 cut(s)	325, 367, 371, 982
Eam1104I	CTCTTC	3 cut(s)	38, 311, 708
EarI	CTCTTC	3 cut(s)	38, 311, 708
EciI	GGCGGA	1 cut(s)	238
Ecl136II	GAGCTC	1 cut(s)	75
Eco24I	GRGCYC	6 cut(s)	77, 304, 335, 390, 611, 753
Eco47I	GGWCC	2 cut(s)	352, 1261
Eco53kI	GAGCTC	1 cut(s)	75
Eco57I	CTGAAG	1 cut(s)	1133
Eco88I	CYCGRG	2 cut(s)	236, 377
EcoICRI	GAGCTC	1 cut(s)	75
EcoNI	CCTNNNNNAGG	1 cut(s)	326
EcoO109I	RGGNCCY	3 cut(s)	331, 332, 387
EcoRI	GAATTC	2 cut(s)	683, 1195
EcoRII	CCWGG	1 cut(s)	1300
EcoT22I	ATGCAT	1 cut(s)	843
EcoT38I	GRGCYC	6 cut(s)	77, 304, 335, 390, 611, 753
FaeI	CATG	5 cut(s)	418, 451, 841, 919, 1054
FalI	AAGNNNNNCTT	2 cut(s)	817, 849
FaqI	GGGAC	1 cut(s)	539
FatI	CATG	5 cut(s)	414, 447, 837, 915, 1050
FauI	CCCGC	1 cut(s)	377
Fnu4HI	GCNGC	9 cut(s)	49, 193, 412, 669, 864, 879, 882, 1029, 1097
FokI	GGATG	3 cut(s)	818, 1073, 1286
FriOI	GRGCYC	6 cut(s)	77, 304, 335, 390, 611, 753
Fsp4HI	GCNGC	9 cut(s)	49, 193, 412, 669, 864, 879, 882, 1029, 1097
FspBI	CTAG	2 cut(s)	875, 1287
GlaI	GCGC	1 cut(s)	1176
GluI	GCNGC	9 cut(s)	49, 193, 412, 669, 864, 879, 882, 1029, 1097
HaeIII	GGCC	3 cut(s)	206, 333, 388
HapII	CCGG	1 cut(s)	633
HgaI	GACGC	3 cut(s)	142, 347, 450
HhaI	GCGC	1 cut(s)	1177
Hin1I	GRCGYC	2 cut(s)	153, 339
Hin1II	CATG	5 cut(s)	418, 451, 841, 919, 1054
Hin6I	GCGC	1 cut(s)	1175
HinP1I	GCGC	1 cut(s)	1175
HincII	GTYRAC	1 cut(s)	315
HindII	GTYRAC	1 cut(s)	315
HinfI	GANTC	9 cut(s)	88, 455, 560, 708, 821, 912, 923, 1159, 1297
HpaII	CCGG	1 cut(s)	633
HphI	GGTGA	2 cut(s)	109, 175
Hpy166II	GTNNAC	3 cut(s)	100, 315, 1091
Hpy188III	TCNNGA	5 cut(s)	85, 379, 534, 688, 725
Hpy8I	GTNNAC	3 cut(s)	100, 315, 1091
Hpy99I	CGWCG	6 cut(s)	73, 158, 227, 341, 444, 506
HpyAV	CCTTC	3 cut(s)	278, 475, 1304
HpyCH4III	ACNGT	4 cut(s)	97, 502, 1088, 1120
HpyCH4IV	ACGT	2 cut(s)	255, 1210
HpyF10VI	GCNNNNNNNGC	4 cut(s)	420, 429, 504, 1105
HpyF3I	CTNAG	3 cut(s)	90, 976, 1142
HpySE526I	ACGT	2 cut(s)	255, 1210
Hsp92I	GRCGYC	2 cut(s)	153, 339
Hsp92II	CATG	5 cut(s)	418, 451, 841, 919, 1054
HspAI	GCGC	1 cut(s)	1175
Kzo9I	GATC	4 cut(s)	325, 367, 371, 982
LguI	GCTCTTC	1 cut(s)	38
LmnI	GCTCC	4 cut(s)	12, 110, 572, 748
Lsp1109I	GCAGC	7 cut(s)	423, 655, 850, 865, 893, 1015, 1083
LweI	GCATC	2 cut(s)	156, 1273
MaeI	CTAG	2 cut(s)	875, 1287
MaeII	ACGT	2 cut(s)	255, 1210
MaeIII	GTNAC	2 cut(s)	85, 616
MalI	GATC	4 cut(s)	327, 369, 373, 984
MbiI	CCGCTC	2 cut(s)	48, 384
MboI	GATC	4 cut(s)	325, 367, 371, 982
MboII	GAAGA	5 cut(s)	55, 256, 298, 725, 1126
MhlI	GDGCHC	7 cut(s)	77, 304, 335, 390, 577, 611, 753
MluCI	AATT	6 cut(s)	178, 489, 683, 952, 1195, 1254
MlyI	GAGTC	7 cut(s)	82, 554, 702, 830, 906, 1168, 1306
MmeI	TCCRAC	2 cut(s)	136, 876
Mph1103I	ATGCAT	1 cut(s)	843
MroXI	GAANNNNTTC	2 cut(s)	695, 927
MseI	TTAA	6 cut(s)	492, 639, 702, 762, 899, 951
MspI	CCGG	1 cut(s)	633
MspR9I	CCNGG	2 cut(s)	634, 1302
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	1 cut(s)	1302
MwoI	GCNNNNNNNGC	4 cut(s)	420, 429, 504, 1105
NciI	CCSGG	1 cut(s)	634
NdeII	GATC	4 cut(s)	325, 367, 371, 982
NheI	GCTAGC	1 cut(s)	874
NlaIII	CATG	5 cut(s)	418, 451, 841, 919, 1054
NlaIV	GGNNCC	8 cut(s)	66, 106, 289, 333, 334, 388, 750, 1262
NmuCI	GTSAC	1 cut(s)	85
NsiI	ATGCAT	1 cut(s)	843
NspI	RCATGY	2 cut(s)	418, 841
PaeI	GCATGC	1 cut(s)	841
PaeR7I	CTCGAG	1 cut(s)	377
PciSI	GCTCTTC	1 cut(s)	38
PcsI	WCGNNNNNNNCGW	1 cut(s)	436
PctI	GAATGC	1 cut(s)	841
PdmI	GAANNNNTTC	2 cut(s)	695, 927
PfeI	GAWTC	2 cut(s)	455, 923
PflMI	CCANNNNNTGG	1 cut(s)	1270
PkrI	GCNGC	9 cut(s)	50, 194, 413, 670, 865, 880, 883, 1030, 1098
Ple19I	CGATCG	2 cut(s)	370, 985
PleI	GAGTC	7 cut(s)	82, 554, 702, 829, 906, 1167, 1305
PpsI	GAGTC	7 cut(s)	82, 554, 702, 829, 906, 1167, 1305
Psp124BI	GAGCTC	1 cut(s)	77
Psp6I	CCWGG	1 cut(s)	1300
PspGI	CCWGG	1 cut(s)	1300
PspN4I	GGNNCC	8 cut(s)	66, 106, 289, 333, 334, 388, 750, 1262
PspOMI	GGGCCC	2 cut(s)	331, 386
PspPI	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
PstI	CTGCAG	2 cut(s)	883, 1101
PstNI	CAGNNNCTG	1 cut(s)	1228
PvuI	CGATCG	2 cut(s)	370, 985
RsaI	GTAC	1 cut(s)	404
RsaNI	GTAC	1 cut(s)	403
SacI	GAGCTC	1 cut(s)	77
SapI	GCTCTTC	1 cut(s)	38
SaqAI	TTAA	6 cut(s)	492, 639, 702, 762, 899, 951
SatI	GCNGC	9 cut(s)	49, 193, 412, 669, 864, 879, 882, 1029, 1097
Sau3AI	GATC	4 cut(s)	325, 367, 371, 982
Sau96I	GGNCC	7 cut(s)	204, 331, 332, 352, 386, 387, 1261
SchI	GAGTC	7 cut(s)	82, 554, 702, 830, 906, 1168, 1306
ScrFI	CCNGG	2 cut(s)	634, 1302
SduI	GDGCHC	7 cut(s)	77, 304, 335, 390, 577, 611, 753
SfaNI	GCATC	2 cut(s)	156, 1273
SfcI	CTRYAG	2 cut(s)	879, 1097
Sfr274I	CTCGAG	1 cut(s)	377
SinI	GGWCC	2 cut(s)	352, 1261
SlaI	CTCGAG	1 cut(s)	377
SmlI	CTYRAG	4 cut(s)	377, 398, 470, 1076
SmoI	CTYRAG	4 cut(s)	377, 398, 470, 1076
SphI	GCATGC	1 cut(s)	841
Sse9I	AATT	6 cut(s)	178, 489, 683, 952, 1195, 1254
SsiI	CCGC	5 cut(s)	48, 192, 249, 384, 1146
SspMI	CTAG	2 cut(s)	875, 1287
SstI	GAGCTC	1 cut(s)	77
StyD4I	CCNGG	2 cut(s)	632, 1300
TaaI	ACNGT	4 cut(s)	97, 502, 1088, 1120
TaiI	ACGT	2 cut(s)	258, 1213
TasI	AATT	6 cut(s)	178, 489, 683, 952, 1195, 1254
TatI	WGTACW	1 cut(s)	402
TauI	GCSGC	2 cut(s)	51, 195
TfiI	GAWTC	2 cut(s)	455, 923
Tru1I	TTAA	6 cut(s)	492, 639, 702, 762, 899, 951
Tru9I	TTAA	6 cut(s)	492, 639, 702, 762, 899, 951
TscAI	CASTG	3 cut(s)	206, 1098, 1285
TseFI	GTSAC	1 cut(s)	85
TseI	GCWGC	7 cut(s)	411, 668, 863, 878, 881, 1028, 1096
Tsp45I	GTSAC	1 cut(s)	85
TspDTI	ATGAA	2 cut(s)	256, 819
TspGWI	ACGGA	2 cut(s)	250, 1073
TspRI	CASTG	3 cut(s)	206, 1098, 1285
Van91I	CCANNNNNTGG	1 cut(s)	1270
VpaK11BI	GGWCC	2 cut(s)	352, 1261
XagI	CCTNNNNNAGG	1 cut(s)	326
XapI	RAATTY	4 cut(s)	178, 683, 1195, 1254
XceI	RCATGY	2 cut(s)	418, 841
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1271
XhoI	CTCGAG	1 cut(s)	377
XmnI	GAANNNNTTC	2 cut(s)	695, 927
XspI	CTAG	2 cut(s)	875, 1287
Zsp2I	ATGCAT	1 cut(s)	843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.