RLG00000023220

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0005466
Physical Location & Seq
Forward (+)
20096698 .. 20103264
6567 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023220

Sequence Viewer

Length: 1803 bp
ATGGCGCCAAGGAAGACCGCATCATCCTCTCCGATCCCAATTGGCAATTGCGAGGTGACAGTGGAAGCTACCGACTTCAGTTGCCGATCAGAGCCGGACTCCCTCCAAATCTCCCTCTCCAAAACATCCAAAATCACTATCTCATTGAGAAAAGAAGTGGAAAGGAATAGCATTGCTGGGCATTTCAAATCTCAAGGAGGTGATCTTTCGTTCGTGCTCGTTAATCCTAAAGATGCCAGTAGCTGTAGCAAATCCTATCTCCAGGAAGTACTAAAGATGTACATTAGGGAACTTCCTGCAATGAATTTCGCTGCCAATACTGGAAAACAATCAATGTTCCTTGAAAGATGCGTTACAAATGGGAAATATTGCACTTTGCTTTTGCAGTCTCATTCTTTGCATCATTCCCAAGAGGTTATAGCTGCTATCACTTACCAAATAGTTCCCACTGACACACAGTACGCTGAGATACCTATTGCTGCTGTCAGTTCAATGTACCAACACAAGGGATTTGGTAGCTCCTTGTTCCTGGAATTGAAAAAGAGACTTCAAAGTGTTGGTATAAGCACAATATTCTGTTGGGGAGACAAGGAATCTGAAGGGTTTTGGCTCAAACAGGGTTTCGTATCAATAGCAGAGGTAGATACTAAGGGTAGACACTGCAGGCCACCTATTAAAGCTGATATTCGTAGAGCATTATGCTTTCCAGGTGGTTCAACCCTCATGGTTTTACATCTTAAGCAGCAGGCTTCAGCAAATACTTTAGACTCTTTGGAGTTGGGAGCTTCTTTTAAGCCTACAGGGAATTCGTCATCTGATGCTCTCACCAGAGAGGACTCCAGCAAGTTGGTCAGCAGTGCAAAATTATCTAATATTGAAGACAATGGTGATATAAACCACTGTTCTTCCAAACAAGGCAAAGTTGCAAAGAGAAAGGTCTGGAAATCTTCAATATCATCACTGAAGTCAAAAAAAGTAAAAGGAAGTCATCACTGTCAGTTTGATTCTAACTCCACTGATGGAAGTGAGTTTTGTTTACAAGGATGCTCCTTTGTTTCTTCCAAAGATAAATCTTTACTGGCAGATCCCCCTGGAGAATGCGCTATCAGTTGCAAGGAAAAGATTGCTGAAGAATGTGGACCAGTTAATATAACACTAGAAACTTCAGTCCAGAAGGAGTTTCAGTCACAGAGAGTATCCTTCAAAATCATGTTGATGAATATTGCAGATGATGCAAAGAAAGCAAATCTTACAAAGGTAATCGAGGACCTTGGTGGGGCTATTACGTGTAATGGGAGTACAAGTACACATGTTGTTACTGGGAAAGTGAGAACAACTCTGAATTTCTGTACTGCTCTTTGTTCAGGAGCTTGGATCGTTTCTCCCTTTTGGTTGAAAGAAAGCTTTCGTCAAGGAACATACGTTGACGAATCATCTTACATATTACATGATGAAGAATATGTTCTTAAATATGGAGCTGAGCTGAAAGCTGCAGTTCTCAGAGCAAAAGCAAGTCCTCAAGGCTTGCTTAAAGGCTATAATGTATGCATAGCAGCTCATGTTCAACCCCCTGCAAAGATGTTATCTACCATTGTCAGGTCTGCTGGTGGAAATATAATTGGTGGACTGGAGAAAGTAAATGAAGCTTCAAGAACAATATTTGTGGCATGCGAAGAAGACATGGAAGAAGTAGTGTTGGCTGTAAAGAAGGGGATAGGCACTTTTAGCAGTGATTGGCTTATGAACTGTGTCATGAGACAGGAGCTAGACTTAGAGGCCCCCCAATTTGTAGAGTCCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000414 GO:0000416 GO:0000726 GO:0002637 GO:0002639 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002700 GO:0002702 GO:0002703 GO:0002705 GO:0002706 GO:0002708 GO:0002712 GO:0002714 GO:0002819 GO:0002821 GO:0002822 GO:0002824 GO:0002889 GO:0002891 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010212 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010638 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030330 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034708 GO:0034968 GO:0035065 GO:0035066 GO:0035097 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043412 GO:0043414 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045191 GO:0045830 GO:0045893 GO:0045911 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0050867 GO:0050871 GO:0050896 GO:0051052 GO:0051054 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051249 GO:0051251 GO:0051252 GO:0051254 GO:0051276 GO:0051568 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0060260 GO:0060261 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0072331 GO:0080090 GO:0090304 GO:1901360 GO:1901564 GO:1901983 GO:1901985 GO:1902275 GO:1902494 GO:1902680 GO:1903320 GO:1903322 GO:1903506 GO:1903508 GO:1905269 GO:1990234 GO:2000026 GO:2000112 GO:2000142 GO:2000144 GO:2000756 GO:2000758 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10 BRCT RTT107_BRCT_5

Protein Analysis

601

Amino Acids

65.41

Weight (kDa)

8.24

Isoelectric Point (pI)

45.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IDM1_C PF23209 133 - 216 4.7e-06 Increased DNA methylation 1, C-terminal domain
RTT107_BRCT_5 PF16770 390 - 482 7.1e-08 Regulator of Ty1 transposition protein 107 BRCT domain
BRCT PF00533 407 - 469 2.8e-07 BRCA1 C Terminus (BRCT) domain
BRCT_2 PF16589 509 - 590 7.5e-12 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccI GTMKAC 1 cut(s) 655
AciI CCGC 1 cut(s) 18
AclWI GGATC 3 cut(s) 28, 1079, 1382
AcsI RAATTY 3 cut(s) 304, 805, 1342
AcuI CTGAAG 6 cut(s) 61, 618, 735, 983, 1149, 1149
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 7 cut(s) 270, 281, 461, 497, 1300, 1306, 1351
AfiI CCNNNNNNNGG 3 cut(s) 505, 1276, 1596
AflII CTTAAG 1 cut(s) 737
AflIII ACRYGT 2 cut(s) 1286, 1309
AjnI CCWGG 4 cut(s) 261, 528, 706, 1090
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 4 cut(s) 393, 538, 579, 1750
AlwI GGATC 3 cut(s) 28, 1079, 1382
AlwNI CAGNNNCTG 1 cut(s) 243
AoxI GGCC 2 cut(s) 665, 1776
ApeKI GCWGC 6 cut(s) 311, 422, 479, 742, 1490, 1553
ApoI RAATTY 3 cut(s) 304, 805, 1342
Asp700I GAANNNNTTC 2 cut(s) 1404, 1461
AspLEI GCGC 2 cut(s) 7, 1103
AspS9I GGNCC 3 cut(s) 1139, 1267, 1777
AsuHPI GGTGA 4 cut(s) 67, 212, 817, 899
AvaII GGWCC 2 cut(s) 1139, 1267
BanI GGYRCC 1 cut(s) 4
BbsI GAAGAC 3 cut(s) 20, 885, 1683
Bbv12I GWGCWC 1 cut(s) 219
BbvI GCAGC 6 cut(s) 298, 409, 466, 754, 1477, 1565
BccI CCATC 1 cut(s) 1013
BciT130I CCWGG 4 cut(s) 263, 530, 708, 1092
BciVI GTATCC 1 cut(s) 1207
BcoDI GTCTC 4 cut(s) 393, 538, 579, 1750
BfaI CTAG 2 cut(s) 1157, 1766
BfmI CTRYAG 4 cut(s) 244, 661, 798, 1491
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 737
BfuI GTATCC 1 cut(s) 1207
BisI GCNGC 6 cut(s) 312, 423, 480, 743, 1491, 1554
BlpI GCTNAGC 1 cut(s) 1479
BlsI GCNGC 6 cut(s) 313, 424, 481, 744, 1492, 1555
BmcAI AGTACT 1 cut(s) 270
Bme1390I CCNGG 4 cut(s) 263, 530, 708, 1092
Bme18I GGWCC 2 cut(s) 1139, 1267
BmgT120I GGNCC 3 cut(s) 1139, 1267, 1777
BmiI GGNNCC 2 cut(s) 6, 1779
BmrFI CCNGG 4 cut(s) 263, 530, 708, 1092
BmrI ACTGGG 1 cut(s) 1329
BmsI GCATC 7 cut(s) 29, 223, 338, 409, 808, 1034, 1222
BmuI ACTGGG 1 cut(s) 1329
BpiI GAAGAC 3 cut(s) 20, 885, 1683
BplI GAGNNNNNCTC 4 cut(s) 83, 115, 1321, 1353
BpmI CTGGAG 4 cut(s) 245, 823, 1113, 1649
Bpu1102I GCTNAGC 1 cut(s) 1479
BpuEI CTTGAG 2 cut(s) 177, 1503
BsaAI YACGTR 1 cut(s) 1287
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 3 cut(s) 8, 1090, 1270
BsaXI ACNNNNNCTCC 4 cut(s) 1169, 1199, 1288, 1318
Bsc4I CCNNNNNNNGG 3 cut(s) 505, 1276, 1596
Bse1I ACTGG 6 cut(s) 237, 325, 1083, 1142, 1324, 1632
Bse3DI GCAATG 2 cut(s) 171, 306
BseBI CCWGG 4 cut(s) 263, 530, 708, 1092
BseDI CCNNGG 3 cut(s) 8, 1090, 1270
BseGI GGATG 3 cut(s) 23, 125, 1049
BseLI CCNNNNNNNGG 3 cut(s) 505, 1276, 1596
BseMI GCAATG 2 cut(s) 171, 306
BseMII CTCAG 3 cut(s) 456, 1470, 1513
BseNI ACTGG 6 cut(s) 237, 325, 1083, 1142, 1324, 1632
BseXI GCAGC 6 cut(s) 298, 409, 466, 754, 1477, 1565
BseYI CCCAGC 1 cut(s) 176
BshFI GGCC 2 cut(s) 667, 1778
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 1 cut(s) 219
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 1 cut(s) 1780
BslI CCNNNNNNNGG 3 cut(s) 505, 1276, 1596
BsmAI GTCTC 4 cut(s) 393, 538, 579, 1750
BsmFI GGGAC 1 cut(s) 1780
BsmI GAATGC 1 cut(s) 1103
BsnI GGCC 2 cut(s) 667, 1778
Bsp1286I GDGCHC 1 cut(s) 219
Bsp1407I TGTACA 1 cut(s) 279
Bsp143I GATC 5 cut(s) 33, 86, 202, 1084, 1374
Bsp1720I GCTNAGC 1 cut(s) 1479
BspACI CCGC 1 cut(s) 18
BspANI GGCC 2 cut(s) 667, 1778
BspCNI CTCAG 3 cut(s) 457, 1471, 1512
BspHI TCATGA 1 cut(s) 1752
BspLI GGNNCC 2 cut(s) 6, 1779
BspMAI CTGCAG 2 cut(s) 665, 1495
BspPI GGATC 3 cut(s) 28, 1079, 1382
BspT107I GGYRCC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 737
BsrDI GCAATG 2 cut(s) 171, 306
BsrGI TGTACA 1 cut(s) 279
BsrI ACTGG 6 cut(s) 237, 325, 1083, 1142, 1324, 1632
BssECI CCNNGG 3 cut(s) 8, 1090, 1270
BssMI GATC 5 cut(s) 33, 86, 202, 1084, 1374
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 8, 1270
Bst2UI CCWGG 4 cut(s) 263, 530, 708, 1092
Bst4CI ACNGT 5 cut(s) 61, 459, 902, 995, 1748
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 737
BstAPI GCANNNNNTGC 1 cut(s) 1232
BstAUI TGTACA 1 cut(s) 279
BstBAI YACGTR 1 cut(s) 1287
BstC8I GCNNGC 4 cut(s) 665, 747, 1526, 1669
BstDEI CTNAG 5 cut(s) 465, 648, 1479, 1499, 1771
BstF5I GGATG 3 cut(s) 23, 125, 1049
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 1103
BstKTI GATC 5 cut(s) 36, 89, 205, 1087, 1377
BstMAI GTCTC 4 cut(s) 393, 538, 579, 1750
BstMBI GATC 5 cut(s) 33, 86, 202, 1084, 1374
BstMWI GCNNNNNNNGC 3 cut(s) 1232, 1241, 1725
BstNI CCWGG 4 cut(s) 263, 530, 708, 1092
BstNSI RCATGY 2 cut(s) 1313, 1671
BstSCI CCNGG 4 cut(s) 261, 528, 706, 1090
BstSFI CTRYAG 4 cut(s) 244, 661, 798, 1491
BstV1I GCAGC 6 cut(s) 298, 409, 466, 754, 1477, 1565
BstV2I GAAGAC 3 cut(s) 20, 885, 1683
BstX2I RGATCY 1 cut(s) 1084
BstXI CCANNNNNNTGG 1 cut(s) 847
BstYI RGATCY 1 cut(s) 1084
BsuI GTATCC 1 cut(s) 1207
BsuRI GGCC 2 cut(s) 667, 1778
BtsCI GGATG 3 cut(s) 23, 125, 1049
BtsI GCAGTG 3 cut(s) 658, 862, 1735
BtsIMutI CAGTG 9 cut(s) 66, 447, 658, 862, 898, 959, 991, 1014, 1735
Cac8I GCNNGC 4 cut(s) 665, 747, 1526, 1669
CaiI CAGNNNCTG 1 cut(s) 243
CciI TCATGA 1 cut(s) 1752
CfoI GCGC 2 cut(s) 7, 1103
Cfr13I GGNCC 3 cut(s) 1139, 1267, 1777
Csp6I GTAC 7 cut(s) 269, 280, 460, 496, 1299, 1305, 1350
CspCI CAANNNNNGTGG 2 cut(s) 1644, 1679
CviAII CATG 8 cut(s) 724, 1210, 1310, 1448, 1559, 1668, 1681, 1753
CviQI GTAC 7 cut(s) 269, 280, 460, 496, 1299, 1305, 1350
DdeI CTNAG 5 cut(s) 465, 648, 1479, 1499, 1771
DinI GGCGCC 1 cut(s) 6
DpnI GATC 5 cut(s) 35, 88, 204, 1086, 1376
DpnII GATC 5 cut(s) 33, 86, 202, 1084, 1374
Eco130I CCWWGG 2 cut(s) 8, 1270
Eco47I GGWCC 2 cut(s) 1139, 1267
Eco57I CTGAAG 6 cut(s) 61, 618, 735, 983, 1149, 1149
EcoO109I RGGNCCY 2 cut(s) 1267, 1777
EcoRI GAATTC 1 cut(s) 805
EcoRII CCWGG 4 cut(s) 261, 528, 706, 1090
EcoT14I CCWWGG 2 cut(s) 8, 1270
EcoT22I ATGCAT 1 cut(s) 1550
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 8, 1270
FaeI CATG 8 cut(s) 727, 1213, 1313, 1451, 1562, 1671, 1684, 1756
FalI AAGNNNNNCTT 4 cut(s) 1233, 1265, 1512, 1544
FaqI GGGAC 1 cut(s) 1780
FatI CATG 8 cut(s) 723, 1209, 1309, 1447, 1558, 1667, 1680, 1752
FblI GTMKAC 1 cut(s) 655
Fnu4HI GCNGC 6 cut(s) 312, 423, 480, 743, 1491, 1554
FokI GGATG 3 cut(s) 10, 112, 1056
Fsp4HI GCNGC 6 cut(s) 312, 423, 480, 743, 1491, 1554
FspBI CTAG 2 cut(s) 1157, 1766
GlaI GCGC 2 cut(s) 6, 1102
GluI GCNGC 6 cut(s) 312, 423, 480, 743, 1491, 1554
GsaI CCCAGC 1 cut(s) 180
GsuI CTGGAG 4 cut(s) 245, 823, 1113, 1649
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 2 cut(s) 667, 1778
HapII CCGG 1 cut(s) 95
HhaI GCGC 2 cut(s) 7, 1103
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 8 cut(s) 727, 1213, 1313, 1451, 1562, 1671, 1684, 1756
Hin6I GCGC 2 cut(s) 5, 1101
HinP1I GCGC 2 cut(s) 5, 1101
HincII GTYRAC 1 cut(s) 1426
HindII GTYRAC 1 cut(s) 1426
HindIII AAGCTT 2 cut(s) 1402, 1644
HinfI GANTC 7 cut(s) 98, 593, 767, 836, 1004, 1430, 1793
HpaII CCGG 1 cut(s) 95
HphI GGTGA 4 cut(s) 67, 212, 817, 899
Hpy166II GTNNAC 6 cut(s) 656, 1037, 1139, 1307, 1426, 1625
Hpy188I TCNGA 6 cut(s) 33, 91, 598, 817, 1341, 1502
Hpy188III TCNNGA 5 cut(s) 940, 1171, 1365, 1650, 1753
Hpy8I GTNNAC 6 cut(s) 656, 1037, 1139, 1307, 1426, 1625
HpyAV CCTTC 4 cut(s) 593, 1168, 1210, 1702
HpyCH4III ACNGT 5 cut(s) 61, 459, 902, 995, 1748
HpyCH4IV ACGT 2 cut(s) 1286, 1422
HpyF10VI GCNNNNNNNGC 3 cut(s) 1232, 1241, 1725
HpyF3I CTNAG 5 cut(s) 465, 648, 1479, 1499, 1771
HpySE526I ACGT 2 cut(s) 1286, 1422
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 8 cut(s) 727, 1213, 1313, 1451, 1562, 1671, 1684, 1756
HspAI GCGC 2 cut(s) 5, 1101
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 5 cut(s) 33, 86, 202, 1084, 1374
LmnI GCTCC 6 cut(s) 524, 782, 1052, 1367, 1475, 1762
Lsp1109I GCAGC 6 cut(s) 298, 409, 466, 754, 1477, 1565
LweI GCATC 7 cut(s) 29, 223, 338, 409, 808, 1034, 1222
MaeI CTAG 2 cut(s) 1157, 1766
MaeII ACGT 2 cut(s) 1286, 1422
MaeIII GTNAC 4 cut(s) 55, 352, 1185, 1315
MalI GATC 5 cut(s) 35, 88, 204, 1086, 1376
MboI GATC 5 cut(s) 33, 86, 202, 1084, 1374
MfeI CAATTG 2 cut(s) 39, 46
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 1 cut(s) 219
MluCI AATT 9 cut(s) 39, 46, 304, 533, 805, 863, 1342, 1617, 1784
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 4 cut(s) 92, 761, 830, 1802
Mph1103I ATGCAT 1 cut(s) 1550
MroXI GAANNNNTTC 2 cut(s) 1404, 1461
MseI TTAA 7 cut(s) 222, 675, 738, 792, 1146, 1467, 1530
MslI CAYNNNNRTG 1 cut(s) 1214
MspCI CTTAAG 1 cut(s) 737
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 4 cut(s) 263, 530, 708, 1092
MunI CAATTG 2 cut(s) 39, 46
Mva1269I GAATGC 1 cut(s) 1103
MvaI CCWGG 4 cut(s) 263, 530, 708, 1092
MwoI GCNNNNNNNGC 3 cut(s) 1232, 1241, 1725
NarI GGCGCC 1 cut(s) 5
NdeII GATC 5 cut(s) 33, 86, 202, 1084, 1374
NlaIII CATG 8 cut(s) 727, 1213, 1313, 1451, 1562, 1671, 1684, 1756
NlaIV GGNNCC 2 cut(s) 6, 1779
NmuCI GTSAC 2 cut(s) 55, 1185
NsiI ATGCAT 1 cut(s) 1550
NspI RCATGY 2 cut(s) 1313, 1671
PaeI GCATGC 1 cut(s) 1671
PagI TCATGA 1 cut(s) 1752
PciI ACATGT 1 cut(s) 1309
PctI GAATGC 1 cut(s) 1103
PdmI GAANNNNTTC 2 cut(s) 1404, 1461
PfeI GAWTC 3 cut(s) 593, 1004, 1430
PfoI TCCNGGA 2 cut(s) 261, 528
PkrI GCNGC 6 cut(s) 313, 424, 481, 744, 1492, 1555
PleI GAGTC 4 cut(s) 92, 761, 830, 1801
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 4 cut(s) 92, 761, 830, 1801
Ppu21I YACGTR 1 cut(s) 1287
PpuMI RGGWCCY 1 cut(s) 1267
PscI ACATGT 1 cut(s) 1309
Psp5II RGGWCCY 1 cut(s) 1267
Psp6I CCWGG 4 cut(s) 261, 528, 706, 1090
PspFI CCCAGC 1 cut(s) 176
PspGI CCWGG 4 cut(s) 261, 528, 706, 1090
PspN4I GGNNCC 2 cut(s) 6, 1779
PspPI GGNCC 3 cut(s) 1139, 1267, 1777
PspPPI RGGWCCY 1 cut(s) 1267
PstI CTGCAG 2 cut(s) 665, 1495
PstNI CAGNNNCTG 1 cut(s) 243
PsuI RGATCY 1 cut(s) 1084
RsaI GTAC 7 cut(s) 270, 281, 461, 497, 1300, 1306, 1351
RsaNI GTAC 7 cut(s) 269, 280, 460, 496, 1299, 1305, 1350
RseI CAYNNNNRTG 1 cut(s) 1214
SaqAI TTAA 7 cut(s) 222, 675, 738, 792, 1146, 1467, 1530
SatI GCNGC 6 cut(s) 312, 423, 480, 743, 1491, 1554
Sau3AI GATC 5 cut(s) 33, 86, 202, 1084, 1374
Sau96I GGNCC 3 cut(s) 1139, 1267, 1777
ScaI AGTACT 1 cut(s) 270
SchI GAGTC 4 cut(s) 92, 761, 830, 1802
ScrFI CCNGG 4 cut(s) 263, 530, 708, 1092
SduI GDGCHC 1 cut(s) 219
SfaNI GCATC 7 cut(s) 29, 223, 338, 409, 808, 1034, 1222
SfcI CTRYAG 4 cut(s) 244, 661, 798, 1491
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 2 cut(s) 1139, 1267
SmiMI CAYNNNNRTG 1 cut(s) 1214
SmlI CTYRAG 3 cut(s) 192, 737, 1518
SmoI CTYRAG 3 cut(s) 192, 737, 1518
SphI GCATGC 1 cut(s) 1671
Sse9I AATT 9 cut(s) 39, 46, 304, 533, 805, 863, 1342, 1617, 1784
SsiI CCGC 1 cut(s) 18
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 5 cut(s) 368, 573, 874, 1222, 1659
SspMI CTAG 2 cut(s) 1157, 1766
StyD4I CCNGG 4 cut(s) 261, 528, 706, 1090
StyI CCWWGG 2 cut(s) 8, 1270
TaaI ACNGT 5 cut(s) 61, 459, 902, 995, 1748
TaiI ACGT 2 cut(s) 1289, 1425
TaqI TCGA 1 cut(s) 1263
TasI AATT 9 cut(s) 39, 46, 304, 533, 805, 863, 1342, 1617, 1784
TatI WGTACW 5 cut(s) 268, 279, 1298, 1304, 1349
TfiI GAWTC 3 cut(s) 593, 1004, 1430
Tru1I TTAA 7 cut(s) 222, 675, 738, 792, 1146, 1467, 1530
Tru9I TTAA 7 cut(s) 222, 675, 738, 792, 1146, 1467, 1530
TscAI CASTG 9 cut(s) 66, 454, 665, 862, 905, 966, 998, 1021, 1735
TseFI GTSAC 2 cut(s) 55, 1185
TseI GCWGC 6 cut(s) 311, 422, 479, 742, 1490, 1553
Tsp45I GTSAC 2 cut(s) 55, 1185
TspDTI ATGAA 5 cut(s) 317, 1232, 1467, 1656, 1757
TspRI CASTG 9 cut(s) 66, 454, 665, 862, 905, 966, 998, 1021, 1735
Vha464I CTTAAG 1 cut(s) 737
VpaK11BI GGWCC 2 cut(s) 1139, 1267
XapI RAATTY 3 cut(s) 304, 805, 1342
XceI RCATGY 2 cut(s) 1313, 1671
XmiI GTMKAC 1 cut(s) 655
XmnI GAANNNNTTC 2 cut(s) 1404, 1461
XspI CTAG 2 cut(s) 1157, 1766
ZrmI AGTACT 1 cut(s) 270
Zsp2I ATGCAT 1 cut(s) 1550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.