Rroxscaffold_6G00397640

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0005466
Physical Location & Seq
Forward (+)
19322197 .. 19329139
6943 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00397640.1

Sequence Viewer

Length: 2013 bp
ATGGCGCCAAGGAAGACCTCATCGTCCTCTCCGATCCCAATCGGCAATTGCGAGGTGACAGTGGAAGCTACCGACTTCAGTTGCCGATCAGAGCCGGACTCCCTCCAAATCTCCCTCTCCACAACCTCCAAAATCACTATCTCATTGAGAAAACAAGCCGAAACAAATAGCGTTTCTGGGCATTTCAAATCTCAAGGAGGTGATCTTTCGTTCGTGCTCGTTAATCCTAAAGATGCCAGTAGCTGTAGCAAATCCTATCTCCAGGAAGTACTACAGATGTACATTAGGGAACTTCCTGCAATGAATTTCGCTGCCAACACTGGAAAACAATCAATGTTTCTTGAAAGATGCGTTACAAATGGGAAATATTGCACTTTGCTTTTGCAATCTCATTCTTTGCATCATTCCCAAGAGGTTATAGCTGCTATCACTTACCAAATAGTTCCCGCTGACACACAGTACGCTGAGATACCTATTGCTGCTGTCAGTTCAATGTACCAACACAAGGGATTTGGTAGCTCCTTGTTCCTGGAATTGAAAAAGAGACTTCAGAGTGTTGGTATATGCACAATATTCTGTTGGGGAGACAAGGAATCTGAAGGGTTTTGGCTCAAACAGGGTTTTGTATCAATAGCAGAGGTAGATACTAAGGGTAGACGCTGCAGGCCACCTGTTAAAGCTGATATTCGTAGAGCATTATGCTTTCCAGGTGGTTCAACCCTCATGGTTTTACATCTTAAGCAGCAGGCTTCAGCAAATACTCTAGACTCTTTGGAGTTGGGTGCTTCTTTTAAGCCTACAGGGAATTCGTCATCTGATGCTCTCACCAGAGAGGACTCCAGCAAGTTGGTCAGCGGTGCAAAATTATCCAATATTGAAGACAATGGTGATATAAACCACTGTTCTTCCAAACAAGGCAAAGTTGCAAAGAGAAAGGTCTGGAAATCTTCAATATCATCACTGAAGTCAAAAAAAGTAAAAGGAAGTCATCGCTGTCAGTTTGAGTCTAACTCCACTGATGGAAGTGAGTTTTGTTTACAAGGATGCTCCTTTGTTTCTTCCAAAGATAAATCTTTACTGTCAGATCCCCCTAGAGAGTGTGCTATTAGTTGCGAGGAAAAGATTGCTGAAGAATGTGGACCAGTTAATATAACACTAGAAATTTCAGTCCAGAAGGAGTTTCAGTCACAGAGAGAATCCTTCAAAATCATGTTGATGAATATTGCAGATGATGCAAAGAAAGCAAATCTTACAAAGTCAGTGGTTCCTGTTGAATTTAGAAAAGAACAGGACCGTCATCATATGGCATTACAAATGAATAGAGTACATAGGTGCAGTGTTCTGCTTGTTTCTCATGATAACATTCATGGGTCAGATGACGAAAATGCGTATGACAGTTATAGGCAGACACTGATTGTTATAGACAGACCCAGATGGCTCGAATTCAATGTAGTTCAGTTTGAAATTCTTTTAGGTCCAATAGTAATCGAGGACCTTGGTGGGGCTATTACGTGTAATGGGAGTACAAGTACACATGTTGTTACCGGGAAAGTGAGAACAACTCTGAATTTCTGTACTGCTCTTTGTTCAGGAGCTTGGATCGTTTCTCCCTTTTGGTTGAAAGAAAGCTTTCGTCAAGGAACATACGTTGACGAATCATCCTACATATTACATGATGAAGAATATGTTCTTAAATATGGAGCTGAGCTGAAAGCTGCAGTTCTCAGAGCAAAAGCAAGTCCTCAAGGCTTGCTTAAAGGCTATAATGTATACATAGCAGCTCATGTTCAACCCCCCTGCAAAGATGTTATCTACCATTGTCAGATAATTGGTGGACTGGAGAAAGTAAATGAAGCTTCAAGAACAATATTTGTGGCATGCGAAGAAGACATGGAAGAAGTAGTGTTGGCTGTAAAGAAGGGGATAGGCACTTTTAGCAGTGATTGGCTTATGAACTGTGTCATGAGACAGGAGCTAGACTTAGAGGCCCCCCAATTTGTGGAGTCCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000414 GO:0000416 GO:0000726 GO:0002637 GO:0002639 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002700 GO:0002702 GO:0002703 GO:0002705 GO:0002706 GO:0002708 GO:0002712 GO:0002714 GO:0002819 GO:0002821 GO:0002822 GO:0002824 GO:0002889 GO:0002891 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010212 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010638 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030330 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034708 GO:0034968 GO:0035065 GO:0035066 GO:0035097 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043412 GO:0043414 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045191 GO:0045830 GO:0045893 GO:0045911 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0050867 GO:0050871 GO:0050896 GO:0051052 GO:0051054 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051249 GO:0051251 GO:0051252 GO:0051254 GO:0051276 GO:0051568 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0060260 GO:0060261 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0072331 GO:0080090 GO:0090304 GO:1901360 GO:1901564 GO:1901983 GO:1901985 GO:1902275 GO:1902494 GO:1902680 GO:1903320 GO:1903322 GO:1903506 GO:1903508 GO:1905269 GO:1990234 GO:2000026 GO:2000112 GO:2000142 GO:2000144 GO:2000756 GO:2000758 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10 BRCT RTT107_BRCT_5

Protein Analysis

670

Amino Acids

74.1

Weight (kDa)

6.79

Isoelectric Point (pI)

47.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT_2 PF16589 584 - 660 5.8e-07 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 22
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 1 cut(s) 1999
AccI GTMKAC 2 cut(s) 655, 1770
AciI CCGC 2 cut(s) 447, 855
AclWI GGATC 3 cut(s) 28, 1079, 1607
AcsI RAATTY 7 cut(s) 304, 805, 1161, 1274, 1442, 1464, 1567
AcuI CTGAAG 6 cut(s) 61, 533, 618, 735, 983, 1149
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 8 cut(s) 270, 281, 461, 497, 1326, 1525, 1531, 1576
AfiI CCNNNNNNNGG 3 cut(s) 505, 1501, 1999
AflII CTTAAG 1 cut(s) 737
AflIII ACRYGT 2 cut(s) 1511, 1534
AjnI CCWGG 3 cut(s) 261, 528, 706
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 3 cut(s) 538, 579, 1960
AlwI GGATC 3 cut(s) 28, 1079, 1607
AlwNI CAGNNNCTG 2 cut(s) 243, 1411
AoxI GGCC 2 cut(s) 665, 1986
ApeKI GCWGC 7 cut(s) 311, 422, 479, 660, 742, 1715, 1778
ApoI RAATTY 7 cut(s) 304, 805, 1161, 1274, 1442, 1464, 1567
Asp700I GAANNNNTTC 2 cut(s) 1629, 1686
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 5 cut(s) 1139, 1291, 1475, 1492, 1987
AsuC2I CCSGG 1 cut(s) 1546
AsuHPI GGTGA 4 cut(s) 67, 212, 817, 899
AvaII GGWCC 4 cut(s) 1139, 1291, 1475, 1492
BanI GGYRCC 1 cut(s) 4
BbsI GAAGAC 3 cut(s) 20, 885, 1893
Bbv12I GWGCWC 1 cut(s) 219
BbvI GCAGC 7 cut(s) 298, 409, 466, 647, 754, 1702, 1790
BccI CCATC 2 cut(s) 1013, 1428
BciT130I CCWGG 3 cut(s) 263, 530, 708
BcnI CCSGG 1 cut(s) 1546
BcoDI GTCTC 3 cut(s) 538, 579, 1960
BfaI CTAG 4 cut(s) 764, 1092, 1157, 1976
BfmI CTRYAG 5 cut(s) 244, 272, 661, 798, 1716
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 737
BisI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1716, 1779
BlpI GCTNAGC 1 cut(s) 1704
BlsI GCNGC 7 cut(s) 313, 424, 481, 662, 744, 1717, 1780
BmcAI AGTACT 1 cut(s) 270
Bme1390I CCNGG 4 cut(s) 263, 530, 708, 1546
Bme18I GGWCC 4 cut(s) 1139, 1291, 1475, 1492
BmgT120I GGNCC 5 cut(s) 1139, 1291, 1475, 1492, 1987
BmiI GGNNCC 3 cut(s) 6, 1266, 1989
BmrFI CCNGG 4 cut(s) 263, 530, 708, 1546
BmsI GCATC 6 cut(s) 223, 338, 409, 808, 1034, 1222
BpiI GAAGAC 3 cut(s) 20, 885, 1893
BplI GAGNNNNNCTC 6 cut(s) 83, 115, 995, 1027, 1546, 1578
BpmI CTGGAG 3 cut(s) 245, 823, 1859
Bpu1102I GCTNAGC 1 cut(s) 1704
BpuEI CTTGAG 2 cut(s) 177, 1728
BpuMI CCSGG 1 cut(s) 1546
BsaAI YACGTR 1 cut(s) 1512
BsaBI GATNNNNATC 1 cut(s) 38
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 8, 1495
BsaXI ACNNNNNCTCC 4 cut(s) 1169, 1199, 1513, 1543
Bsc4I CCNNNNNNNGG 3 cut(s) 505, 1501, 1999
Bse1I ACTGG 4 cut(s) 237, 325, 1142, 1842
Bse3DI GCAATG 1 cut(s) 306
Bse8I GATNNNNATC 1 cut(s) 38
BseBI CCWGG 3 cut(s) 263, 530, 708
BseDI CCNNGG 2 cut(s) 8, 1495
BseGI GGATG 2 cut(s) 1049, 1658
BseJI GATNNNNATC 1 cut(s) 38
BseLI CCNNNNNNNGG 3 cut(s) 505, 1501, 1999
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 3 cut(s) 456, 1695, 1738
BseNI ACTGG 4 cut(s) 237, 325, 1142, 1842
BseXI GCAGC 7 cut(s) 298, 409, 466, 647, 754, 1702, 1790
BsgI GTGCAG 1 cut(s) 1354
BshFI GGCC 2 cut(s) 667, 1988
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 1 cut(s) 219
BsiSI CCGG 2 cut(s) 95, 1545
BslFI GGGAC 1 cut(s) 1990
BslI CCNNNNNNNGG 3 cut(s) 505, 1501, 1999
BsmAI GTCTC 3 cut(s) 538, 579, 1960
BsmFI GGGAC 1 cut(s) 1990
BsnI GGCC 2 cut(s) 667, 1988
Bsp1286I GDGCHC 1 cut(s) 219
Bsp1407I TGTACA 1 cut(s) 279
Bsp143I GATC 5 cut(s) 33, 86, 202, 1084, 1599
Bsp1720I GCTNAGC 1 cut(s) 1704
BspACI CCGC 2 cut(s) 447, 855
BspANI GGCC 2 cut(s) 667, 1988
BspCNI CTCAG 3 cut(s) 457, 1696, 1737
BspHI TCATGA 2 cut(s) 1354, 1962
BspLI GGNNCC 3 cut(s) 6, 1266, 1989
BspMAI CTGCAG 2 cut(s) 665, 1720
BspPI GGATC 3 cut(s) 28, 1079, 1607
BspT107I GGYRCC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 737
BsrDI GCAATG 1 cut(s) 306
BsrGI TGTACA 1 cut(s) 279
BsrI ACTGG 4 cut(s) 237, 325, 1142, 1842
BssECI CCNNGG 2 cut(s) 8, 1495
BssMI GATC 5 cut(s) 33, 86, 202, 1084, 1599
BssNAI GTATAC 1 cut(s) 1771
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 8, 1495
Bst1107I GTATAC 1 cut(s) 1771
Bst2UI CCWGG 3 cut(s) 263, 530, 708
Bst4CI ACNGT 7 cut(s) 61, 459, 902, 1080, 1295, 1397, 1958
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 737
BstAPI GCANNNNNTGC 1 cut(s) 1232
BstAUI TGTACA 1 cut(s) 279
BstBAI YACGTR 1 cut(s) 1512
BstC8I GCNNGC 4 cut(s) 665, 747, 1751, 1879
BstDEI CTNAG 5 cut(s) 465, 648, 1704, 1724, 1981
BstF5I GGATG 2 cut(s) 1049, 1658
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 5 cut(s) 36, 89, 205, 1087, 1602
BstMAI GTCTC 3 cut(s) 538, 579, 1960
BstMBI GATC 5 cut(s) 33, 86, 202, 1084, 1599
BstMWI GCNNNNNNNGC 3 cut(s) 1232, 1241, 1935
BstNI CCWGG 3 cut(s) 263, 530, 708
BstNSI RCATGY 2 cut(s) 1538, 1881
BstSCI CCNGG 4 cut(s) 261, 528, 706, 1544
BstSFI CTRYAG 5 cut(s) 244, 272, 661, 798, 1716
BstV1I GCAGC 7 cut(s) 298, 409, 466, 647, 754, 1702, 1790
BstV2I GAAGAC 3 cut(s) 20, 885, 1893
BstX2I RGATCY 1 cut(s) 1084
BstXI CCANNNNNNTGG 1 cut(s) 847
BstYI RGATCY 1 cut(s) 1084
BstZ17I GTATAC 1 cut(s) 1771
BsuRI GGCC 2 cut(s) 667, 1988
BtgZI GCGATG 1 cut(s) 974
BtsCI GGATG 2 cut(s) 1049, 1658
BtsI GCAGTG 2 cut(s) 1342, 1945
BtsIMutI CAGTG 9 cut(s) 66, 318, 898, 959, 1014, 1266, 1342, 1409, 1945
Cac8I GCNNGC 4 cut(s) 665, 747, 1751, 1879
CaiI CAGNNNCTG 2 cut(s) 243, 1411
CciI TCATGA 2 cut(s) 1354, 1962
CfoI GCGC 1 cut(s) 7
Cfr13I GGNCC 5 cut(s) 1139, 1291, 1475, 1492, 1987
CseI GACGC 1 cut(s) 666
Csp6I GTAC 8 cut(s) 269, 280, 460, 496, 1325, 1524, 1530, 1575
CspCI CAANNNNNGTGG 4 cut(s) 1242, 1277, 1854, 1889
CviQI GTAC 8 cut(s) 269, 280, 460, 496, 1325, 1524, 1530, 1575
DdeI CTNAG 5 cut(s) 465, 648, 1704, 1724, 1981
DinI GGCGCC 1 cut(s) 6
DpnI GATC 5 cut(s) 35, 88, 204, 1086, 1601
DpnII GATC 5 cut(s) 33, 86, 202, 1084, 1599
DrdI GACNNNNNNGTC 1 cut(s) 22
DseDI GACNNNNNNGTC 1 cut(s) 22
Eco130I CCWWGG 2 cut(s) 8, 1495
Eco47I GGWCC 4 cut(s) 1139, 1291, 1475, 1492
Eco57I CTGAAG 6 cut(s) 61, 533, 618, 735, 983, 1149
EcoO109I RGGNCCY 2 cut(s) 1492, 1987
EcoRI GAATTC 2 cut(s) 805, 1442
EcoRII CCWGG 3 cut(s) 261, 528, 706
EcoT14I CCWWGG 2 cut(s) 8, 1495
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 8, 1495
FalI AAGNNNNNCTT 4 cut(s) 1233, 1265, 1737, 1769
FaqI GGGAC 1 cut(s) 1990
FauI CCCGC 1 cut(s) 454
FauNDI CATATG 1 cut(s) 1302
FblI GTMKAC 2 cut(s) 655, 1770
Fnu4HI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1716, 1779
FokI GGATG 2 cut(s) 1056, 1645
Fsp4HI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1716, 1779
FspBI CTAG 4 cut(s) 764, 1092, 1157, 1976
GlaI GCGC 1 cut(s) 6
GluI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1716, 1779
GsuI CTGGAG 3 cut(s) 245, 823, 1859
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 2 cut(s) 667, 1988
HapII CCGG 2 cut(s) 95, 1545
HgaI GACGC 1 cut(s) 666
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HincII GTYRAC 1 cut(s) 1651
HindII GTYRAC 1 cut(s) 1651
HindIII AAGCTT 2 cut(s) 1627, 1854
HinfI GANTC 8 cut(s) 98, 593, 767, 836, 1004, 1196, 1655, 2003
HpaII CCGG 2 cut(s) 95, 1545
HphI GGTGA 4 cut(s) 67, 212, 817, 899
Hpy166II GTNNAC 7 cut(s) 656, 1037, 1139, 1532, 1651, 1771, 1835
Hpy188III TCNNGA 8 cut(s) 341, 764, 940, 1171, 1355, 1590, 1860, 1963
Hpy8I GTNNAC 7 cut(s) 656, 1037, 1139, 1532, 1651, 1771, 1835
HpyAV CCTTC 4 cut(s) 593, 1168, 1210, 1912
HpyCH4III ACNGT 7 cut(s) 61, 459, 902, 1080, 1295, 1397, 1958
HpyCH4IV ACGT 2 cut(s) 1511, 1647
HpyF10VI GCNNNNNNNGC 3 cut(s) 1232, 1241, 1935
HpyF3I CTNAG 5 cut(s) 465, 648, 1704, 1724, 1981
HpySE526I ACGT 2 cut(s) 1511, 1647
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 5
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 5 cut(s) 33, 86, 202, 1084, 1599
LmnI GCTCC 5 cut(s) 524, 1052, 1592, 1700, 1972
Lsp1109I GCAGC 7 cut(s) 298, 409, 466, 647, 754, 1702, 1790
LweI GCATC 6 cut(s) 223, 338, 409, 808, 1034, 1222
MaeI CTAG 4 cut(s) 764, 1092, 1157, 1976
MaeII ACGT 2 cut(s) 1511, 1647
MaeIII GTNAC 4 cut(s) 55, 352, 1185, 1540
MalI GATC 5 cut(s) 35, 88, 204, 1086, 1601
MboI GATC 5 cut(s) 33, 86, 202, 1084, 1599
MfeI CAATTG 1 cut(s) 46
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 1 cut(s) 219
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 5 cut(s) 92, 761, 830, 1013, 2012
MroXI GAANNNNTTC 2 cut(s) 1629, 1686
MseI TTAA 7 cut(s) 222, 675, 738, 792, 1146, 1692, 1755
MslI CAYNNNNRTG 1 cut(s) 1214
MspA1I CMGCKG 2 cut(s) 449, 855
MspCI CTTAAG 1 cut(s) 737
MspI CCGG 2 cut(s) 95, 1545
MspR9I CCNGG 4 cut(s) 263, 530, 708, 1546
MunI CAATTG 1 cut(s) 46
MvaI CCWGG 3 cut(s) 263, 530, 708
MwoI GCNNNNNNNGC 3 cut(s) 1232, 1241, 1935
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 1546
NdeI CATATG 1 cut(s) 1302
NdeII GATC 5 cut(s) 33, 86, 202, 1084, 1599
NlaIV GGNNCC 3 cut(s) 6, 1266, 1989
NmuCI GTSAC 2 cut(s) 55, 1185
NspI RCATGY 2 cut(s) 1538, 1881
PaeI GCATGC 1 cut(s) 1881
PagI TCATGA 2 cut(s) 1354, 1962
PciI ACATGT 1 cut(s) 1534
PcsI WCGNNNNNNNCGW 2 cut(s) 29, 48
PdmI GAANNNNTTC 2 cut(s) 1629, 1686
PfeI GAWTC 3 cut(s) 593, 1196, 1655
PflMI CCANNNNNTGG 1 cut(s) 1999
PfoI TCCNGGA 2 cut(s) 261, 528
PkrI GCNGC 7 cut(s) 313, 424, 481, 662, 744, 1717, 1780
PleI GAGTC 5 cut(s) 92, 761, 830, 1012, 2011
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 5 cut(s) 92, 761, 830, 1012, 2011
Ppu21I YACGTR 1 cut(s) 1512
PpuMI RGGWCCY 1 cut(s) 1492
PscI ACATGT 1 cut(s) 1534
Psp5II RGGWCCY 1 cut(s) 1492
Psp6I CCWGG 3 cut(s) 261, 528, 706
PspGI CCWGG 3 cut(s) 261, 528, 706
PspN4I GGNNCC 3 cut(s) 6, 1266, 1989
PspPI GGNCC 5 cut(s) 1139, 1291, 1475, 1492, 1987
PspPPI RGGWCCY 1 cut(s) 1492
PstI CTGCAG 2 cut(s) 665, 1720
PstNI CAGNNNCTG 2 cut(s) 243, 1411
PsuI RGATCY 1 cut(s) 1084
RsaI GTAC 8 cut(s) 270, 281, 461, 497, 1326, 1525, 1531, 1576
RsaNI GTAC 8 cut(s) 269, 280, 460, 496, 1325, 1524, 1530, 1575
RseI CAYNNNNRTG 1 cut(s) 1214
SaqAI TTAA 7 cut(s) 222, 675, 738, 792, 1146, 1692, 1755
SatI GCNGC 7 cut(s) 312, 423, 480, 661, 743, 1716, 1779
Sau3AI GATC 5 cut(s) 33, 86, 202, 1084, 1599
Sau96I GGNCC 5 cut(s) 1139, 1291, 1475, 1492, 1987
ScaI AGTACT 1 cut(s) 270
SchI GAGTC 5 cut(s) 92, 761, 830, 1013, 2012
ScrFI CCNGG 4 cut(s) 263, 530, 708, 1546
SduI GDGCHC 1 cut(s) 219
SfaNI GCATC 6 cut(s) 223, 338, 409, 808, 1034, 1222
SfcI CTRYAG 5 cut(s) 244, 272, 661, 798, 1716
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 4 cut(s) 1139, 1291, 1475, 1492
SmiMI CAYNNNNRTG 1 cut(s) 1214
SmlI CTYRAG 3 cut(s) 192, 737, 1743
SmoI CTYRAG 3 cut(s) 192, 737, 1743
SphI GCATGC 1 cut(s) 1881
SsiI CCGC 2 cut(s) 447, 855
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 5 cut(s) 368, 573, 874, 1222, 1869
SspMI CTAG 4 cut(s) 764, 1092, 1157, 1976
StyD4I CCNGG 4 cut(s) 261, 528, 706, 1544
StyI CCWWGG 2 cut(s) 8, 1495
TaaI ACNGT 7 cut(s) 61, 459, 902, 1080, 1295, 1397, 1958
TaiI ACGT 2 cut(s) 1514, 1650
TaqI TCGA 2 cut(s) 1440, 1488
TatI WGTACW 6 cut(s) 268, 279, 1324, 1523, 1529, 1574
TfiI GAWTC 3 cut(s) 593, 1196, 1655
Tru1I TTAA 7 cut(s) 222, 675, 738, 792, 1146, 1692, 1755
Tru9I TTAA 7 cut(s) 222, 675, 738, 792, 1146, 1692, 1755
TscAI CASTG 9 cut(s) 66, 325, 905, 966, 1021, 1266, 1342, 1416, 1945
TseFI GTSAC 2 cut(s) 55, 1185
TseI GCWGC 7 cut(s) 311, 422, 479, 660, 742, 1715, 1778
Tsp45I GTSAC 2 cut(s) 55, 1185
TspDTI ATGAA 7 cut(s) 317, 1232, 1331, 1355, 1692, 1866, 1967
TspRI CASTG 9 cut(s) 66, 325, 905, 966, 1021, 1266, 1342, 1416, 1945
Van91I CCANNNNNTGG 1 cut(s) 1999
Vha464I CTTAAG 1 cut(s) 737
VpaK11BI GGWCC 4 cut(s) 1139, 1291, 1475, 1492
XapI RAATTY 7 cut(s) 304, 805, 1161, 1274, 1442, 1464, 1567
XbaI TCTAGA 1 cut(s) 763
XceI RCATGY 2 cut(s) 1538, 1881
XmiI GTMKAC 2 cut(s) 655, 1770
XmnI GAANNNNTTC 2 cut(s) 1629, 1686
XspI CTAG 4 cut(s) 764, 1092, 1157, 1976
ZrmI AGTACT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.