Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0003105

Physical Location & Seq

Genomic Coordinates Reverse (-)

41509249 .. 41514382

Gene Structure 5134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025042

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGAAGCCATATTTAGTTTGTGCAACAGTTCTTATTCTCTCATTCCTTTGCCAAACCATAGCTGATCTCAGTTCAGACAAACAAGCCCTTCTCGACTTCATTTCAGTTGTTCCTCATGGCCGAAAAGTCAACTGGGATACTACCATGTCAGTCTGCAATTCTTGGGTTGGCATCAACTGTACCTTGAATGGCACACGTGTGCTCGCTGTTCGACTCCCTGGTGTTGGACTCTATGGTCCAATTCCATCACACACTCTTGGCAAGCTGGACGCTCTCATGATCCTTAGCCTTCACTCAAACCGCCTTAGTGGGAGTCTTCCATCAGATATTTTTGCCCTTCCTTCCTTGCGCTACATATACCTTCACGACAACAATTTTACAGGTAGTATTCCCTCTTCTCTGCCTCCCAACCTCACTGTACTTGATTTGTCTTCCAACTCCCTCACTGGCAGCATTCCAGCCACAATCCAAAATTTAACACATCTCAATAGGCTGAATCTCCAGAACAATTCCCTCAGTGGACCTGTCCCTGATATCAAAACTCCAAGGCTTAAGCATTTGAATTTAAGCTACAACCACCTTAATGGTTCAATTCCTCCTCCCTTTAAAAAATTCCCCACTTCTTCCTTTCAAGGAAACTCGATGTTATGTGGGCCGCCACTAAAACAGTGTGCTTCAATCACTCCCTCACCTTCTCCATCCCCTAATCTTCAACCACCAGGCTCAACAGGCCCCTCCAAACCAAAAAAAGGATCTAAGATGAAACTAAGTGTTGGGGCTATCATTGCCATTGCATGTGGTGGTTTTGCAGTGTTGTTTCTCTCAGTTCTAGTAATGGTGCTGTGCTGTTTGAAGAGGAAAACCCGCAAAGATGGTGCTGTAGTGAAAACAAAAGGTGGAAGGAGTGAGCAGCCAAAGGAGGACTTCGGAAGTGGGGTGCAAGAGGCTGAGAAGAACAAACTGGTCTTCTTTGAAGGCAGTTCTTATAATTTTGATCTTGAGGATTTACTAAGAGCTTCGGCTGAAGTGCTAGGAAAGGGGAGTTATGGGACTACTTACAAGGCCATCCTGGAGGAGGGGACAACAGTGGTTGTGAAAAGAATGAAAGAAGTTGTTGTGGGGAAAAGGGAATTTGAACAGCTAATGGAGAATGCCGGGAGGATTAGTCAGCACTCACATGTTGTTCCCCTTCGTGCTTATTACTACTCCAAAGATGAAAAGCTCCTGGTTTATGATTACATTGCAGCTGGTAGCTTTGCTGCATTATTGCATGCAGGAAACAGGGAAAGTGGACATAATGGACCGGACTGGGAAACTAGACTTAAGATTGCCCTTGGAAGTGCAAAAGGTCTTGCTCATATCCAGTCGTCTGGCGGAGGGAAATTCATCCATGGCAACATCAAGTCCTCCAACATCCTCATCACCCAGGACCTTAATGGCTGTATCTCAGACTTTGGCCTAACTCCTCTTATGAACTTTGCAACTATACCTTCCAGAAGTGTAGGCTATCGAGCTCCTGAGGTGATTGAAGCTCGAAAATCATTCCAAAAATCCGATGTTTATAGTTTTGGTGTCCTGCTCCTGGAGATGCTCACAGGTAAAGCACCAGTCCAGTCACCAGGGCGTGATGATGTTGTGGATCTTCCAAGGTGGGTACAGTCTGTTGTTCGAGAGGAATGGACAGCAGAGGTGTTTGATGTAGAGCTAATGAGGTTTCAAAATATTGAAGAAGAGTTGGTACAGATGCTTCAAATAGCAATGGCATGTGTGCAAACTGTACCGGACCTGAGGCCTACTATGGAGGAAGTTGTTAAGATGATTGAGGATATCAGGCCACCGGATTCTGAGAACCGACCTTCGTCAGATGATAACAAGTCCAAGAGCTCAAATACTCAGACTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0016020 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

635

Amino Acids

69.13

Weight (kDa)

8.77

Isoelectric Point (pI)

43.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_4	PF12799	136 - 172	2.1e-06	Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr	PF07714	342 - 606	2.6e-32	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	342 - 605	2e-31	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08680 AT3G08680
fragaria_vesca	FvH4_6g09530 FvH4_6g09530 FvH4_6g09530 FvH4_6g09530 FvH4_6g09530 FvH4_6g09530
malus_domestica	MD12G1191600.v1.1
prunus_persica	Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1
pyrus_communis	pycom04g15600 pycom12g17870
rosa_chinensis	RchiOBHm_Chr3g0460121
rosa_laevigata	RLG00000025042
rosa_multiflora	Rmu_sc0000449.1_g000052
rosa_roxburghii	Rroxscaffold_6G00419820
rosa_rugosa	Rorug03G0039700 Rorug03G0039800 Rorug03G0039900 Rorug03G0040000 Rorug03G0040100
rosa_samantha	Rh3AG098100 Rh3BG101200 Rh3CG103300 Rh3DG102500
rosa_wichuraiana	Rw3G008280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	987
AasI	GACNNNNNNGTC	1 cut(s)	234
AciI	CCGC	4 cut(s)	301, 656, 865, 1374
AclWI	GGATC	3 cut(s)	274, 760, 1647
AcoI	YGGCCR	1 cut(s)	118
AcsI	RAATTY	5 cut(s)	472, 562, 611, 1130, 1382
AcuI	CTGAAG	1 cut(s)	1044
AcvI	CACGTG	1 cut(s)	197
AfaI	GTAC	5 cut(s)	181, 420, 1656, 1740, 1779
AfiI	CCNNNNNNNGG	4 cut(s)	224, 749, 1075, 1582
AflII	CTTAAG	2 cut(s)	551, 1322
AflIII	ACRYGT	3 cut(s)	194, 196, 1177
AjnI	CCWGG	7 cut(s)	217, 718, 1068, 1224, 1425, 1581, 1618
AleI	CACNNNNGTG	1 cut(s)	197
Alw21I	GWGCWC	3 cut(s)	204, 1516, 1886
AlwI	GGATC	3 cut(s)	274, 760, 1647
AoxI	GGCC	7 cut(s)	118, 653, 730, 1062, 1456, 1790, 1832
ApeKI	GCWGC	4 cut(s)	450, 910, 1244, 1259
ApoI	RAATTY	5 cut(s)	472, 562, 611, 1130, 1382
AspLEI	GCGC	1 cut(s)	351
AspS9I	GGNCC	7 cut(s)	236, 521, 653, 731, 1301, 1429, 1783
AsuC2I	CCSGG	1 cut(s)	1156
AsuHPI	GGTGA	4 cut(s)	681, 1414, 1534, 1608
AvaII	GGWCC	5 cut(s)	236, 521, 1301, 1429, 1783
AxyI	CCTNAGG	2 cut(s)	1518, 1787
BanII	GRGCYC	2 cut(s)	1516, 1886
BarI	GAAGNNNNNNTAC	6 cut(s)	379, 411, 1722, 1731, 1754, 1763
BbrPI	CACGTG	1 cut(s)	197
BbsI	GAAGAC	3 cut(s)	308, 423, 958
Bbv12I	GWGCWC	3 cut(s)	204, 1516, 1886
BbvI	GCAGC	4 cut(s)	462, 922, 1246, 1256
BccI	CCATC	5 cut(s)	253, 328, 706, 866, 1073
BciT130I	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1427, 1583, 1620
BciVI	GTATCC	1 cut(s)	130
BcnI	CCSGG	1 cut(s)	1156
BfaI	CTAG	3 cut(s)	830, 1031, 1317
BfmI	CTRYAG	1 cut(s)	879
BfrI	CTTAAG	2 cut(s)	551, 1322
BfuI	GTATCC	1 cut(s)	130
BisI	GCNGC	5 cut(s)	451, 656, 911, 1245, 1260
BlsI	GCNGC	5 cut(s)	452, 657, 912, 1246, 1261
Bme1390I	CCNGG	8 cut(s)	219, 720, 1070, 1156, 1226, 1427, 1583, 1620
Bme18I	GGWCC	5 cut(s)	236, 521, 1301, 1429, 1783
BmgT120I	GGNCC	7 cut(s)	236, 521, 653, 731, 1301, 1429, 1783
BmiI	GGNNCC	1 cut(s)	733
BmrFI	CCNGG	8 cut(s)	219, 720, 1070, 1156, 1226, 1427, 1583, 1620
BmrI	ACTGGG	2 cut(s)	142, 1318
BmsI	GCATC	3 cut(s)	180, 1578, 1734
BmuI	ACTGGG	2 cut(s)	142, 1318
BoxI	GACNNNNGTC	1 cut(s)	1858
BpiI	GAAGAC	3 cut(s)	308, 423, 958
BpmI	CTGGAG	3 cut(s)	485, 1091, 1604
Bpu10I	CCTNAGC	1 cut(s)	284
BpuEI	CTTGAG	1 cut(s)	1019
BpuMI	CCSGG	1 cut(s)	1156
BsaAI	YACGTR	1 cut(s)	197
BsaJI	CCNNGG	7 cut(s)	217, 545, 1333, 1390, 1425, 1619, 1646
BsaWI	WCCGGW	3 cut(s)	1303, 1780, 1837
BsaXI	ACNNNNNCTCC	3 cut(s)	1150, 1180, 1882
Bsc4I	CCNNNNNNNGG	4 cut(s)	224, 749, 1075, 1582
Bse1I	ACTGG	7 cut(s)	137, 451, 966, 1313, 1363, 1607, 1612
Bse21I	CCTNAGG	2 cut(s)	1518, 1787
Bse3DI	GCAATG	4 cut(s)	783, 789, 1239, 1764
BseBI	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1427, 1583, 1620
BseDI	CCNNGG	7 cut(s)	217, 545, 1333, 1390, 1425, 1619, 1646
BseGI	GGATG	4 cut(s)	698, 1065, 1386, 1413
BseLI	CCNNNNNNNGG	4 cut(s)	224, 749, 1075, 1582
BseMI	GCAATG	4 cut(s)	783, 789, 1239, 1764
BseMII	CTCAG	8 cut(s)	82, 529, 837, 939, 1461, 1509, 1778, 1836
BseNI	ACTGG	7 cut(s)	137, 451, 966, 1313, 1363, 1607, 1612
BseRI	GAGGAG	3 cut(s)	588, 1088, 1455
BseXI	GCAGC	4 cut(s)	462, 922, 1246, 1256
BshFI	GGCC	7 cut(s)	120, 655, 732, 1064, 1458, 1792, 1834
BsiHKAI	GWGCWC	3 cut(s)	204, 1516, 1886
BsiSI	CCGG	4 cut(s)	1155, 1304, 1781, 1838
BslFI	GGGAC	3 cut(s)	512, 1063, 1093
BslI	CCNNNNNNNGG	4 cut(s)	224, 749, 1075, 1582
BsmFI	GGGAC	3 cut(s)	512, 1063, 1093
BsmI	GAATGC	2 cut(s)	453, 1156
BsnI	GGCC	7 cut(s)	120, 655, 732, 1064, 1458, 1792, 1834
Bsp1286I	GDGCHC	3 cut(s)	204, 1516, 1886
Bsp143I	GATC	5 cut(s)	64, 279, 752, 994, 1639
Bsp19I	CCATGG	1 cut(s)	1390
BspACI	CCGC	4 cut(s)	301, 656, 865, 1374
BspANI	GGCC	7 cut(s)	120, 655, 732, 1064, 1458, 1792, 1834
BspCNI	CTCAG	8 cut(s)	81, 528, 836, 940, 1460, 1510, 1779, 1837
BspHI	TCATGA	1 cut(s)	276
BspLI	GGNNCC	1 cut(s)	733
BspPI	GGATC	3 cut(s)	274, 760, 1647
BspTI	CTTAAG	2 cut(s)	551, 1322
BsrDI	GCAATG	4 cut(s)	783, 789, 1239, 1764
BsrI	ACTGG	7 cut(s)	137, 451, 966, 1313, 1363, 1607, 1612
BssECI	CCNNGG	7 cut(s)	217, 545, 1333, 1390, 1425, 1619, 1646
BssMI	GATC	5 cut(s)	64, 279, 752, 994, 1639
BssT1I	CCWWGG	4 cut(s)	545, 1333, 1390, 1646
Bst2UI	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1427, 1583, 1620
Bst4CI	ACNGT	7 cut(s)	28, 179, 418, 669, 1087, 1659, 1777
Bst6I	CTCTTC	3 cut(s)	400, 848, 1725
BstAFI	CTTAAG	2 cut(s)	551, 1322
BstBAI	YACGTR	1 cut(s)	197
BstC8I	GCNNGC	3 cut(s)	204, 263, 1272
BstDSI	CCRYGG	1 cut(s)	1390
BstENI	CCTNNNNNAGG	1 cut(s)	1073
BstF5I	GGATG	4 cut(s)	698, 1065, 1386, 1413
BstHHI	GCGC	1 cut(s)	351
BstKTI	GATC	5 cut(s)	67, 282, 755, 997, 1642
BstMBI	GATC	5 cut(s)	64, 279, 752, 994, 1639
BstMWI	GCNNNNNNNGC	2 cut(s)	729, 785
BstNI	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1427, 1583, 1620
BstNSI	RCATGY	4 cut(s)	798, 1181, 1274, 1767
BstPAI	GACNNNNGTC	1 cut(s)	1858
BstSCI	CCNGG	8 cut(s)	217, 718, 1068, 1154, 1224, 1425, 1581, 1618
BstSFI	CTRYAG	1 cut(s)	879
BstV1I	GCAGC	4 cut(s)	462, 922, 1246, 1256
BstV2I	GAAGAC	3 cut(s)	308, 423, 958
BstX2I	RGATCY	2 cut(s)	752, 1639
BstXI	CCANNNNNNTGG	2 cut(s)	584, 1370
BstYI	RGATCY	2 cut(s)	752, 1639
Bsu36I	CCTNAGG	2 cut(s)	1518, 1787
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	7 cut(s)	120, 655, 732, 1064, 1458, 1792, 1834
BtgI	CCRYGG	1 cut(s)	1390
BtsCI	GGATG	4 cut(s)	698, 1065, 1386, 1413
BtsI	GCAGTG	1 cut(s)	816
BtsIMutI	CAGTG	6 cut(s)	414, 444, 523, 674, 816, 1092
Cac8I	GCNNGC	3 cut(s)	204, 263, 1272
CciI	TCATGA	1 cut(s)	276
CfoI	GCGC	1 cut(s)	351
Cfr13I	GGNCC	7 cut(s)	236, 521, 653, 731, 1301, 1429, 1783
CseI	GACGC	1 cut(s)	278
Csp6I	GTAC	5 cut(s)	180, 419, 1655, 1739, 1778
CviAII	CATG	9 cut(s)	116, 145, 277, 795, 1178, 1271, 1391, 1764, 1902
CviQI	GTAC	5 cut(s)	180, 419, 1655, 1739, 1778
DpnI	GATC	5 cut(s)	66, 281, 754, 996, 1641
DpnII	GATC	5 cut(s)	64, 279, 752, 994, 1639
DraI	TTTAAA	1 cut(s)	607
DrdI	GACNNNNNNGTC	1 cut(s)	234
DseDI	GACNNNNNNGTC	1 cut(s)	234
EaeI	YGGCCR	1 cut(s)	118
Eam1104I	CTCTTC	3 cut(s)	400, 848, 1725
EarI	CTCTTC	3 cut(s)	400, 848, 1725
EciI	GGCGGA	1 cut(s)	1389
Ecl136II	GAGCTC	2 cut(s)	1514, 1884
Eco130I	CCWWGG	4 cut(s)	545, 1333, 1390, 1646
Eco147I	AGGCCT	1 cut(s)	1792
Eco24I	GRGCYC	2 cut(s)	1516, 1886
Eco32I	GATATC	2 cut(s)	535, 1828
Eco47I	GGWCC	5 cut(s)	236, 521, 1301, 1429, 1783
Eco53kI	GAGCTC	2 cut(s)	1514, 1884
Eco57I	CTGAAG	1 cut(s)	1044
Eco72I	CACGTG	1 cut(s)	197
Eco81I	CCTNAGG	2 cut(s)	1518, 1787
EcoICRI	GAGCTC	2 cut(s)	1514, 1884
EcoNI	CCTNNNNNAGG	1 cut(s)	1073
EcoO109I	RGGNCCY	2 cut(s)	731, 1429
EcoRII	CCWGG	7 cut(s)	217, 718, 1068, 1224, 1425, 1581, 1618
EcoRV	GATATC	2 cut(s)	535, 1828
EcoT14I	CCWWGG	4 cut(s)	545, 1333, 1390, 1646
EcoT38I	GRGCYC	2 cut(s)	1516, 1886
ErhI	CCWWGG	4 cut(s)	545, 1333, 1390, 1646
FaeI	CATG	9 cut(s)	119, 148, 280, 798, 1181, 1274, 1394, 1767, 1905
FalI	AAGNNNNNCTT	2 cut(s)	908, 940
FaqI	GGGAC	3 cut(s)	512, 1063, 1093
FatI	CATG	9 cut(s)	115, 144, 276, 794, 1177, 1270, 1390, 1763, 1901
FauI	CCCGC	1 cut(s)	872
Fnu4HI	GCNGC	5 cut(s)	451, 656, 911, 1245, 1260
FokI	GGATG	4 cut(s)	685, 1052, 1373, 1400
FriOI	GRGCYC	2 cut(s)	1516, 1886
Fsp4HI	GCNGC	5 cut(s)	451, 656, 911, 1245, 1260
FspBI	CTAG	3 cut(s)	830, 1031, 1317
GlaI	GCGC	1 cut(s)	350
GluI	GCNGC	5 cut(s)	451, 656, 911, 1245, 1260
GsuI	CTGGAG	3 cut(s)	485, 1091, 1604
HaeIII	GGCC	7 cut(s)	120, 655, 732, 1064, 1458, 1792, 1834
HapII	CCGG	4 cut(s)	1155, 1304, 1781, 1838
HgaI	GACGC	1 cut(s)	278
HhaI	GCGC	1 cut(s)	351
Hin1II	CATG	9 cut(s)	119, 148, 280, 798, 1181, 1274, 1394, 1767, 1905
Hin6I	GCGC	1 cut(s)	349
HinP1I	GCGC	1 cut(s)	349
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HinfI	GANTC	6 cut(s)	213, 228, 313, 496, 1841, 1897
HpaII	CCGG	4 cut(s)	1155, 1304, 1781, 1838
HphI	GGTGA	4 cut(s)	681, 1414, 1534, 1608
Hpy166II	GTNNAC	3 cut(s)	130, 521, 1292
Hpy188I	TCNGA	8 cut(s)	76, 325, 929, 1450, 1555, 1846, 1864, 1896
Hpy188III	TCNNGA	8 cut(s)	92, 277, 365, 502, 998, 1494, 1517, 1670
Hpy8I	GTNNAC	3 cut(s)	130, 521, 1292
HpyCH4III	ACNGT	7 cut(s)	28, 179, 418, 669, 1087, 1659, 1777
HpyCH4IV	ACGT	1 cut(s)	196
HpyF10VI	GCNNNNNNNGC	2 cut(s)	729, 785
HpySE526I	ACGT	1 cut(s)	196
Hsp92II	CATG	9 cut(s)	119, 148, 280, 798, 1181, 1274, 1394, 1767, 1905
HspAI	GCGC	1 cut(s)	349
Kzo9I	GATC	5 cut(s)	64, 279, 752, 994, 1639
LmnI	GCTCC	3 cut(s)	1227, 1519, 1584
Lsp1109I	GCAGC	4 cut(s)	462, 922, 1246, 1256
LweI	GCATC	3 cut(s)	180, 1578, 1734
MaeI	CTAG	3 cut(s)	830, 1031, 1317
MaeII	ACGT	1 cut(s)	196
MaeIII	GTNAC	1 cut(s)	1614
MalI	GATC	5 cut(s)	66, 281, 754, 996, 1641
MboI	GATC	5 cut(s)	64, 279, 752, 994, 1639
MflI	RGATCY	2 cut(s)	752, 1639
MhlI	GDGCHC	3 cut(s)	204, 1516, 1886
MlyI	GAGTC	4 cut(s)	207, 222, 322, 1891
MmeI	TCCRAC	3 cut(s)	205, 459, 1434
MseI	TTAA	8 cut(s)	476, 552, 566, 582, 606, 1323, 1434, 1812
MslI	CAYNNNNRTG	3 cut(s)	197, 582, 1176
MspA1I	CMGCKG	1 cut(s)	1247
MspCI	CTTAAG	2 cut(s)	551, 1322
MspI	CCGG	4 cut(s)	1155, 1304, 1781, 1838
MspR9I	CCNGG	8 cut(s)	219, 720, 1070, 1156, 1226, 1427, 1583, 1620
Mva1269I	GAATGC	2 cut(s)	453, 1156
MvaI	CCWGG	7 cut(s)	219, 720, 1070, 1226, 1427, 1583, 1620
MwoI	GCNNNNNNNGC	2 cut(s)	729, 785
NciI	CCSGG	1 cut(s)	1156
NcoI	CCATGG	1 cut(s)	1390
NdeII	GATC	5 cut(s)	64, 279, 752, 994, 1639
NlaIII	CATG	9 cut(s)	119, 148, 280, 798, 1181, 1274, 1394, 1767, 1905
NlaIV	GGNNCC	1 cut(s)	733
NmuCI	GTSAC	1 cut(s)	1614
NspI	RCATGY	4 cut(s)	798, 1181, 1274, 1767
OliI	CACNNNNGTG	1 cut(s)	197
PaeI	GCATGC	1 cut(s)	1274
PagI	TCATGA	1 cut(s)	276
PceI	AGGCCT	1 cut(s)	1792
PciI	ACATGT	1 cut(s)	1177
PctI	GAATGC	2 cut(s)	453, 1156
PfeI	GAWTC	2 cut(s)	496, 1841
PfoI	TCCNGGA	2 cut(s)	1068, 1581
PkrI	GCNGC	5 cut(s)	452, 657, 912, 1246, 1261
PleI	GAGTC	4 cut(s)	207, 222, 321, 1891
PmaCI	CACGTG	1 cut(s)	197
PmlI	CACGTG	1 cut(s)	197
PpsI	GAGTC	4 cut(s)	207, 222, 321, 1891
Ppu21I	YACGTR	1 cut(s)	197
PpuMI	RGGWCCY	1 cut(s)	1429
PscI	ACATGT	1 cut(s)	1177
PshAI	GACNNNNGTC	1 cut(s)	1858
PsiI	TTATAA	1 cut(s)	987
Psp124BI	GAGCTC	2 cut(s)	1516, 1886
Psp5II	RGGWCCY	1 cut(s)	1429
Psp6I	CCWGG	7 cut(s)	217, 718, 1068, 1224, 1425, 1581, 1618
PspCI	CACGTG	1 cut(s)	197
PspGI	CCWGG	7 cut(s)	217, 718, 1068, 1224, 1425, 1581, 1618
PspN4I	GGNNCC	1 cut(s)	733
PspPI	GGNCC	7 cut(s)	236, 521, 653, 731, 1301, 1429, 1783
PspPPI	RGGWCCY	1 cut(s)	1429
PsuI	RGATCY	2 cut(s)	752, 1639
PvuII	CAGCTG	1 cut(s)	1247
RsaI	GTAC	5 cut(s)	181, 420, 1656, 1740, 1779
RsaNI	GTAC	5 cut(s)	180, 419, 1655, 1739, 1778
RseI	CAYNNNNRTG	3 cut(s)	197, 582, 1176
SacI	GAGCTC	2 cut(s)	1516, 1886
SaqAI	TTAA	8 cut(s)	476, 552, 566, 582, 606, 1323, 1434, 1812
SatI	GCNGC	5 cut(s)	451, 656, 911, 1245, 1260
Sau3AI	GATC	5 cut(s)	64, 279, 752, 994, 1639
Sau96I	GGNCC	7 cut(s)	236, 521, 653, 731, 1301, 1429, 1783
SchI	GAGTC	4 cut(s)	207, 222, 322, 1891
ScrFI	CCNGG	8 cut(s)	219, 720, 1070, 1156, 1226, 1427, 1583, 1620
SduI	GDGCHC	3 cut(s)	204, 1516, 1886
SfaNI	GCATC	3 cut(s)	180, 1578, 1734
SfcI	CTRYAG	1 cut(s)	879
SinI	GGWCC	5 cut(s)	236, 521, 1301, 1429, 1783
SmiMI	CAYNNNNRTG	3 cut(s)	197, 582, 1176
SmlI	CTYRAG	3 cut(s)	551, 998, 1322
SmoI	CTYRAG	3 cut(s)	551, 998, 1322
SphI	GCATGC	1 cut(s)	1274
SseBI	AGGCCT	1 cut(s)	1792
SsiI	CCGC	4 cut(s)	301, 656, 865, 1374
SspI	AATATT	1 cut(s)	1723
SspMI	CTAG	3 cut(s)	830, 1031, 1317
SstI	GAGCTC	2 cut(s)	1516, 1886
StuI	AGGCCT	1 cut(s)	1792
StyD4I	CCNGG	8 cut(s)	217, 718, 1068, 1154, 1224, 1425, 1581, 1618
StyI	CCWWGG	4 cut(s)	545, 1333, 1390, 1646
TaaI	ACNGT	7 cut(s)	28, 179, 418, 669, 1087, 1659, 1777
TaiI	ACGT	1 cut(s)	199
TaqI	TCGA	6 cut(s)	93, 211, 641, 1510, 1534, 1669
TatI	WGTACW	1 cut(s)	418
TauI	GCSGC	1 cut(s)	658
TfiI	GAWTC	2 cut(s)	496, 1841
Tru1I	TTAA	8 cut(s)	476, 552, 566, 582, 606, 1323, 1434, 1812
Tru9I	TTAA	8 cut(s)	476, 552, 566, 582, 606, 1323, 1434, 1812
TscAI	CASTG	6 cut(s)	421, 451, 523, 674, 816, 1092
TseFI	GTSAC	1 cut(s)	1614
TseI	GCWGC	4 cut(s)	450, 910, 1244, 1259
Tsp45I	GTSAC	1 cut(s)	1614
TspDTI	ATGAA	7 cut(s)	17, 88, 776, 1118, 1230, 1375, 1487
TspRI	CASTG	6 cut(s)	421, 451, 523, 674, 816, 1092
Vha464I	CTTAAG	2 cut(s)	551, 1322
VpaK11BI	GGWCC	5 cut(s)	236, 521, 1301, 1429, 1783
XagI	CCTNNNNNAGG	1 cut(s)	1073
XapI	RAATTY	5 cut(s)	472, 562, 611, 1130, 1382
XceI	RCATGY	4 cut(s)	798, 1181, 1274, 1767
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1433
XspI	CTAG	3 cut(s)	830, 1031, 1317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.