inactive receptor kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08680 AT3G08680 |
| fragaria_vesca | FvH4_6g09530 FvH4_6g09530 FvH4_6g09530 FvH4_6g09530 FvH4_6g09530 FvH4_6g09530 |
| malus_domestica | MD12G1191600.v1.1 |
| prunus_persica | Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 Prupe.6G296300_v2.0.a1 |
| pyrus_communis | pycom04g15600 pycom12g17870 |
| rosa_chinensis | RchiOBHm_Chr3g0460121 |
| rosa_laevigata | RLG00000025042 |
| rosa_multiflora | Rmu_sc0000449.1_g000052 |
| rosa_roxburghii | Rroxscaffold_6G00419820 |
| rosa_rugosa | Rorug03G0039700 Rorug03G0039800 Rorug03G0039900 Rorug03G0040000 Rorug03G0040100 |
| rosa_samantha | Rh3AG098100 Rh3BG101200 Rh3CG103300 Rh3DG102500 |
| rosa_wichuraiana | Rw3G008280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 978 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 234 |
| AciI | CCGC | 3 cut(s) | 301, 856, 1251 |
| AclWI | GGATC | 3 cut(s) | 274, 751, 1635 |
| AcoI | YGGCCR | 1 cut(s) | 118 |
| AcsI | RAATTY | 4 cut(s) | 562, 611, 1121, 1370 |
| AcuI | CTGAAG | 1 cut(s) | 1035 |
| AcvI | CACGTG | 1 cut(s) | 197 |
| AfaI | GTAC | 5 cut(s) | 181, 420, 1644, 1728, 1767 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 224, 740, 1066, 1570 |
| AflII | CTTAAG | 1 cut(s) | 551 |
| AflIII | ACRYGT | 2 cut(s) | 194, 196 |
| AjnI | CCWGG | 6 cut(s) | 718, 1059, 1215, 1413, 1569, 1606 |
| AleI | CACNNNNGTG | 1 cut(s) | 197 |
| Alw21I | GWGCWC | 2 cut(s) | 1504, 1874 |
| AlwI | GGATC | 3 cut(s) | 274, 751, 1635 |
| Ama87I | CYCGRG | 1 cut(s) | 217 |
| AoxI | GGCC | 6 cut(s) | 118, 653, 721, 1053, 1778, 1820 |
| ApeKI | GCWGC | 3 cut(s) | 450, 901, 1235 |
| ApoI | RAATTY | 4 cut(s) | 562, 611, 1121, 1370 |
| AspLEI | GCGC | 1 cut(s) | 351 |
| AspS9I | GGNCC | 7 cut(s) | 236, 521, 653, 722, 1289, 1417, 1771 |
| AsuC2I | CCSGG | 3 cut(s) | 218, 219, 1147 |
| AsuHPI | GGTGA | 5 cut(s) | 436, 681, 1402, 1522, 1596 |
| AvaI | CYCGRG | 1 cut(s) | 217 |
| AvaII | GGWCC | 5 cut(s) | 236, 521, 1289, 1417, 1771 |
| AxyI | CCTNAGG | 2 cut(s) | 1506, 1775 |
| BanII | GRGCYC | 2 cut(s) | 1504, 1874 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 379, 411, 1710, 1719, 1742, 1751 |
| BbrPI | CACGTG | 1 cut(s) | 197 |
| BbsI | GAAGAC | 3 cut(s) | 308, 423, 949 |
| Bbv12I | GWGCWC | 2 cut(s) | 1504, 1874 |
| BbvI | GCAGC | 3 cut(s) | 462, 913, 1247 |
| BccI | CCATC | 5 cut(s) | 253, 328, 706, 857, 1064 |
| BceAI | ACGGC | 2 cut(s) | 382, 1304 |
| BciT130I | CCWGG | 6 cut(s) | 720, 1061, 1217, 1415, 1571, 1608 |
| BciVI | GTATCC | 1 cut(s) | 130 |
| BcnI | CCSGG | 3 cut(s) | 218, 219, 1147 |
| BfaI | CTAG | 4 cut(s) | 14, 821, 1022, 1305 |
| BfmI | CTRYAG | 1 cut(s) | 870 |
| BfrI | CTTAAG | 1 cut(s) | 551 |
| BfuI | GTATCC | 1 cut(s) | 130 |
| BisI | GCNGC | 4 cut(s) | 451, 902, 1236, 1251 |
| BlpI | GCTNAGC | 1 cut(s) | 1246 |
| BlsI | GCNGC | 4 cut(s) | 452, 903, 1237, 1252 |
| Bme1390I | CCNGG | 9 cut(s) | 218, 219, 720, 1061, 1147, 1217, 1415, 1571, 1608 |
| Bme18I | GGWCC | 5 cut(s) | 236, 521, 1289, 1417, 1771 |
| BmeT110I | CYCGRG | 1 cut(s) | 217 |
| BmgT120I | GGNCC | 7 cut(s) | 236, 521, 653, 722, 1289, 1417, 1771 |
| BmiI | GGNNCC | 1 cut(s) | 724 |
| BmrFI | CCNGG | 9 cut(s) | 218, 219, 720, 1061, 1147, 1217, 1415, 1571, 1608 |
| BmrI | ACTGGG | 2 cut(s) | 142, 1306 |
| BmsI | GCATC | 3 cut(s) | 180, 1566, 1722 |
| BmuI | ACTGGG | 2 cut(s) | 142, 1306 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1846 |
| BpiI | GAAGAC | 3 cut(s) | 308, 423, 949 |
| BpmI | CTGGAG | 3 cut(s) | 485, 1082, 1592 |
| Bpu10I | CCTNAGC | 1 cut(s) | 284 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1246 |
| BpuEI | CTTGAG | 1 cut(s) | 1010 |
| BpuMI | CCSGG | 3 cut(s) | 218, 219, 1147 |
| BsaAI | YACGTR | 1 cut(s) | 197 |
| BsaJI | CCNNGG | 6 cut(s) | 217, 545, 1378, 1413, 1607, 1634 |
| BsaWI | WCCGGW | 3 cut(s) | 1291, 1768, 1825 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 72, 102, 1141, 1171, 1870 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 224, 740, 1066, 1570 |
| Bse118I | RCCGGY | 1 cut(s) | 446 |
| Bse1I | ACTGG | 5 cut(s) | 137, 957, 1301, 1595, 1600 |
| Bse21I | CCTNAGG | 2 cut(s) | 1506, 1775 |
| Bse3DI | GCAATG | 4 cut(s) | 774, 780, 1230, 1752 |
| BseBI | CCWGG | 6 cut(s) | 720, 1061, 1217, 1415, 1571, 1608 |
| BseDI | CCNNGG | 6 cut(s) | 217, 545, 1378, 1413, 1607, 1634 |
| BseGI | GGATG | 4 cut(s) | 698, 1056, 1374, 1401 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 224, 740, 1066, 1570 |
| BseMI | GCAATG | 4 cut(s) | 774, 780, 1230, 1752 |
| BseMII | CTCAG | 9 cut(s) | 82, 499, 529, 828, 930, 1449, 1497, 1766, 1824 |
| BseNI | ACTGG | 5 cut(s) | 137, 957, 1301, 1595, 1600 |
| BseRI | GAGGAG | 4 cut(s) | 80, 588, 1079, 1443 |
| BseXI | GCAGC | 3 cut(s) | 462, 913, 1247 |
| BshFI | GGCC | 6 cut(s) | 120, 655, 723, 1055, 1780, 1822 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1504, 1874 |
| BsiHKCI | CYCGRG | 1 cut(s) | 217 |
| BsiSI | CCGG | 6 cut(s) | 218, 447, 1146, 1292, 1769, 1826 |
| BslFI | GGGAC | 2 cut(s) | 1054, 1084 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 224, 740, 1066, 1570 |
| BsmFI | GGGAC | 2 cut(s) | 1054, 1084 |
| BsmI | GAATGC | 2 cut(s) | 453, 1147 |
| BsnI | GGCC | 6 cut(s) | 120, 655, 723, 1055, 1780, 1822 |
| BsoBI | CYCGRG | 1 cut(s) | 217 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1504, 1874 |
| Bsp143I | GATC | 5 cut(s) | 279, 743, 985, 1627, 1806 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1246 |
| Bsp19I | CCATGG | 1 cut(s) | 1378 |
| BspACI | CCGC | 3 cut(s) | 301, 856, 1251 |
| BspANI | GGCC | 6 cut(s) | 120, 655, 723, 1055, 1780, 1822 |
| BspCNI | CTCAG | 9 cut(s) | 81, 498, 528, 827, 931, 1448, 1498, 1767, 1825 |
| BspHI | TCATGA | 1 cut(s) | 276 |
| BspLI | GGNNCC | 1 cut(s) | 724 |
| BspPI | GGATC | 3 cut(s) | 274, 751, 1635 |
| BspTI | CTTAAG | 1 cut(s) | 551 |
| BsrDI | GCAATG | 4 cut(s) | 774, 780, 1230, 1752 |
| BsrFI | RCCGGY | 1 cut(s) | 446 |
| BsrI | ACTGG | 5 cut(s) | 137, 957, 1301, 1595, 1600 |
| BssAI | RCCGGY | 1 cut(s) | 446 |
| BssECI | CCNNGG | 6 cut(s) | 217, 545, 1378, 1413, 1607, 1634 |
| BssMI | GATC | 5 cut(s) | 279, 743, 985, 1627, 1806 |
| BssT1I | CCWWGG | 3 cut(s) | 545, 1378, 1634 |
| Bst2UI | CCWGG | 6 cut(s) | 720, 1061, 1217, 1415, 1571, 1608 |
| Bst4CI | ACNGT | 7 cut(s) | 28, 179, 418, 669, 1078, 1647, 1765 |
| Bst6I | CTCTTC | 4 cut(s) | 400, 839, 1185, 1713 |
| BstAFI | CTTAAG | 1 cut(s) | 551 |
| BstBAI | YACGTR | 1 cut(s) | 197 |
| BstC8I | GCNNGC | 4 cut(s) | 204, 263, 1753, 1757 |
| BstDSI | CCRYGG | 1 cut(s) | 1378 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1064 |
| BstF5I | GGATG | 4 cut(s) | 698, 1056, 1374, 1401 |
| BstHHI | GCGC | 1 cut(s) | 351 |
| BstKTI | GATC | 5 cut(s) | 282, 746, 988, 1630, 1809 |
| BstMBI | GATC | 5 cut(s) | 279, 743, 985, 1627, 1806 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 776 |
| BstNI | CCWGG | 6 cut(s) | 720, 1061, 1217, 1415, 1571, 1608 |
| BstNSI | RCATGY | 2 cut(s) | 789, 1755 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1846 |
| BstSCI | CCNGG | 9 cut(s) | 216, 217, 718, 1059, 1145, 1215, 1413, 1569, 1606 |
| BstSFI | CTRYAG | 1 cut(s) | 870 |
| BstV1I | GCAGC | 3 cut(s) | 462, 913, 1247 |
| BstV2I | GAAGAC | 3 cut(s) | 308, 423, 949 |
| BstX2I | RGATCY | 2 cut(s) | 743, 1627 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 584, 1358 |
| BstYI | RGATCY | 2 cut(s) | 743, 1627 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1506, 1775 |
| BsuI | GTATCC | 1 cut(s) | 130 |
| BsuRI | GGCC | 6 cut(s) | 120, 655, 723, 1055, 1780, 1822 |
| BtgI | CCRYGG | 1 cut(s) | 1378 |
| BtsCI | GGATG | 4 cut(s) | 698, 1056, 1374, 1401 |
| BtsI | GCAGTG | 1 cut(s) | 807 |
| BtsIMutI | CAGTG | 6 cut(s) | 414, 493, 523, 674, 807, 1083 |
| Cac8I | GCNNGC | 4 cut(s) | 204, 263, 1753, 1757 |
| CciI | TCATGA | 1 cut(s) | 276 |
| CfoI | GCGC | 1 cut(s) | 351 |
| Cfr10I | RCCGGY | 1 cut(s) | 446 |
| Cfr13I | GGNCC | 7 cut(s) | 236, 521, 653, 722, 1289, 1417, 1771 |
| Cfr9I | CCCGGG | 1 cut(s) | 217 |
| CseI | GACGC | 1 cut(s) | 278 |
| Csp6I | GTAC | 5 cut(s) | 180, 419, 1643, 1727, 1766 |
| CviAII | CATG | 7 cut(s) | 116, 277, 786, 1262, 1379, 1752, 1890 |
| CviQI | GTAC | 5 cut(s) | 180, 419, 1643, 1727, 1766 |
| DpnI | GATC | 5 cut(s) | 281, 745, 987, 1629, 1808 |
| DpnII | GATC | 5 cut(s) | 279, 743, 985, 1627, 1806 |
| DraI | TTTAAA | 1 cut(s) | 607 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 234 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 234 |
| EaeI | YGGCCR | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 4 cut(s) | 400, 839, 1185, 1713 |
| EarI | CTCTTC | 4 cut(s) | 400, 839, 1185, 1713 |
| Ecl136II | GAGCTC | 2 cut(s) | 1502, 1872 |
| Eco130I | CCWWGG | 3 cut(s) | 545, 1378, 1634 |
| Eco147I | AGGCCT | 1 cut(s) | 1780 |
| Eco24I | GRGCYC | 2 cut(s) | 1504, 1874 |
| Eco32I | GATATC | 2 cut(s) | 535, 1816 |
| Eco47I | GGWCC | 5 cut(s) | 236, 521, 1289, 1417, 1771 |
| Eco53kI | GAGCTC | 2 cut(s) | 1502, 1872 |
| Eco57I | CTGAAG | 1 cut(s) | 1035 |
| Eco72I | CACGTG | 1 cut(s) | 197 |
| Eco81I | CCTNAGG | 2 cut(s) | 1506, 1775 |
| Eco88I | CYCGRG | 1 cut(s) | 217 |
| EcoICRI | GAGCTC | 2 cut(s) | 1502, 1872 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1064 |
| EcoO109I | RGGNCCY | 2 cut(s) | 722, 1417 |
| EcoRII | CCWGG | 6 cut(s) | 718, 1059, 1215, 1413, 1569, 1606 |
| EcoRV | GATATC | 2 cut(s) | 535, 1816 |
| EcoT14I | CCWWGG | 3 cut(s) | 545, 1378, 1634 |
| EcoT38I | GRGCYC | 2 cut(s) | 1504, 1874 |
| ErhI | CCWWGG | 3 cut(s) | 545, 1378, 1634 |
| FaeI | CATG | 7 cut(s) | 119, 280, 789, 1265, 1382, 1755, 1893 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 899, 931 |
| FaqI | GGGAC | 2 cut(s) | 1054, 1084 |
| FatI | CATG | 7 cut(s) | 115, 276, 785, 1261, 1378, 1751, 1889 |
| FauI | CCCGC | 1 cut(s) | 863 |
| Fnu4HI | GCNGC | 4 cut(s) | 451, 902, 1236, 1251 |
| FokI | GGATG | 4 cut(s) | 685, 1043, 1361, 1388 |
| FriOI | GRGCYC | 2 cut(s) | 1504, 1874 |
| Fsp4HI | GCNGC | 4 cut(s) | 451, 902, 1236, 1251 |
| FspBI | CTAG | 4 cut(s) | 14, 821, 1022, 1305 |
| GlaI | GCGC | 1 cut(s) | 350 |
| GluI | GCNGC | 4 cut(s) | 451, 902, 1236, 1251 |
| GsuI | CTGGAG | 3 cut(s) | 485, 1082, 1592 |
| HaeIII | GGCC | 6 cut(s) | 120, 655, 723, 1055, 1780, 1822 |
| HapII | CCGG | 6 cut(s) | 218, 447, 1146, 1292, 1769, 1826 |
| HgaI | GACGC | 1 cut(s) | 278 |
| HhaI | GCGC | 1 cut(s) | 351 |
| Hin1II | CATG | 7 cut(s) | 119, 280, 789, 1265, 1382, 1755, 1893 |
| Hin6I | GCGC | 1 cut(s) | 349 |
| HinP1I | GCGC | 1 cut(s) | 349 |
| HincII | GTYRAC | 1 cut(s) | 130 |
| HindII | GTYRAC | 1 cut(s) | 130 |
| HinfI | GANTC | 5 cut(s) | 213, 228, 313, 1829, 1885 |
| HpaI | GTTAAC | 1 cut(s) | 130 |
| HpaII | CCGG | 6 cut(s) | 218, 447, 1146, 1292, 1769, 1826 |
| HphI | GGTGA | 5 cut(s) | 436, 681, 1402, 1522, 1596 |
| Hpy166II | GTNNAC | 3 cut(s) | 130, 521, 1280 |
| Hpy188I | TCNGA | 8 cut(s) | 76, 325, 920, 1438, 1543, 1834, 1852, 1884 |
| Hpy188III | TCNNGA | 7 cut(s) | 277, 502, 530, 989, 1482, 1505, 1658 |
| Hpy8I | GTNNAC | 3 cut(s) | 130, 521, 1280 |
| HpyCH4III | ACNGT | 7 cut(s) | 28, 179, 418, 669, 1078, 1647, 1765 |
| HpyCH4IV | ACGT | 1 cut(s) | 196 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 776 |
| HpySE526I | ACGT | 1 cut(s) | 196 |
| Hsp92II | CATG | 7 cut(s) | 119, 280, 789, 1265, 1382, 1755, 1893 |
| HspAI | GCGC | 1 cut(s) | 349 |
| KspAI | GTTAAC | 1 cut(s) | 130 |
| Kzo9I | GATC | 5 cut(s) | 279, 743, 985, 1627, 1806 |
| LmnI | GCTCC | 3 cut(s) | 1218, 1507, 1572 |
| Lsp1109I | GCAGC | 3 cut(s) | 462, 913, 1247 |
| LweI | GCATC | 3 cut(s) | 180, 1566, 1722 |
| MaeI | CTAG | 4 cut(s) | 14, 821, 1022, 1305 |
| MaeII | ACGT | 1 cut(s) | 196 |
| MaeIII | GTNAC | 1 cut(s) | 1602 |
| MalI | GATC | 5 cut(s) | 281, 745, 987, 1629, 1808 |
| MboI | GATC | 5 cut(s) | 279, 743, 985, 1627, 1806 |
| MflI | RGATCY | 2 cut(s) | 743, 1627 |
| MhlI | GDGCHC | 2 cut(s) | 1504, 1874 |
| MlyI | GAGTC | 4 cut(s) | 207, 222, 322, 1879 |
| MmeI | TCCRAC | 4 cut(s) | 205, 459, 1303, 1422 |
| MseI | TTAA | 8 cut(s) | 129, 552, 566, 582, 606, 1422, 1448, 1800 |
| MslI | CAYNNNNRTG | 4 cut(s) | 197, 486, 582, 1167 |
| MspA1I | CMGCKG | 1 cut(s) | 1238 |
| MspCI | CTTAAG | 1 cut(s) | 551 |
| MspI | CCGG | 6 cut(s) | 218, 447, 1146, 1292, 1769, 1826 |
| MspR9I | CCNGG | 9 cut(s) | 218, 219, 720, 1061, 1147, 1217, 1415, 1571, 1608 |
| Mva1269I | GAATGC | 2 cut(s) | 453, 1147 |
| MvaI | CCWGG | 6 cut(s) | 720, 1061, 1217, 1415, 1571, 1608 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 776 |
| NciI | CCSGG | 3 cut(s) | 218, 219, 1147 |
| NcoI | CCATGG | 1 cut(s) | 1378 |
| NdeII | GATC | 5 cut(s) | 279, 743, 985, 1627, 1806 |
| NlaIII | CATG | 7 cut(s) | 119, 280, 789, 1265, 1382, 1755, 1893 |
| NlaIV | GGNNCC | 1 cut(s) | 724 |
| NmuCI | GTSAC | 1 cut(s) | 1602 |
| NspI | RCATGY | 2 cut(s) | 789, 1755 |
| OliI | CACNNNNGTG | 1 cut(s) | 197 |
| PaeI | GCATGC | 1 cut(s) | 1755 |
| PagI | TCATGA | 1 cut(s) | 276 |
| PceI | AGGCCT | 1 cut(s) | 1780 |
| PctI | GAATGC | 2 cut(s) | 453, 1147 |
| PfeI | GAWTC | 1 cut(s) | 1829 |
| PfoI | TCCNGGA | 2 cut(s) | 1059, 1569 |
| PkrI | GCNGC | 4 cut(s) | 452, 903, 1237, 1252 |
| PleI | GAGTC | 4 cut(s) | 207, 222, 321, 1879 |
| PmaCI | CACGTG | 1 cut(s) | 197 |
| PmlI | CACGTG | 1 cut(s) | 197 |
| PpsI | GAGTC | 4 cut(s) | 207, 222, 321, 1879 |
| Ppu21I | YACGTR | 1 cut(s) | 197 |
| PpuMI | RGGWCCY | 1 cut(s) | 1417 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1846 |
| PsiI | TTATAA | 1 cut(s) | 978 |
| Psp124BI | GAGCTC | 2 cut(s) | 1504, 1874 |
| Psp5II | RGGWCCY | 1 cut(s) | 1417 |
| Psp6I | CCWGG | 6 cut(s) | 718, 1059, 1215, 1413, 1569, 1606 |
| PspCI | CACGTG | 1 cut(s) | 197 |
| PspGI | CCWGG | 6 cut(s) | 718, 1059, 1215, 1413, 1569, 1606 |
| PspN4I | GGNNCC | 1 cut(s) | 724 |
| PspPI | GGNCC | 7 cut(s) | 236, 521, 653, 722, 1289, 1417, 1771 |
| PspPPI | RGGWCCY | 1 cut(s) | 1417 |
| PsuI | RGATCY | 2 cut(s) | 743, 1627 |
| PvuII | CAGCTG | 1 cut(s) | 1238 |
| RsaI | GTAC | 5 cut(s) | 181, 420, 1644, 1728, 1767 |
| RsaNI | GTAC | 5 cut(s) | 180, 419, 1643, 1727, 1766 |
| RseI | CAYNNNNRTG | 4 cut(s) | 197, 486, 582, 1167 |
| SacI | GAGCTC | 2 cut(s) | 1504, 1874 |
| SaqAI | TTAA | 8 cut(s) | 129, 552, 566, 582, 606, 1422, 1448, 1800 |
| SatI | GCNGC | 4 cut(s) | 451, 902, 1236, 1251 |
| Sau3AI | GATC | 5 cut(s) | 279, 743, 985, 1627, 1806 |
| Sau96I | GGNCC | 7 cut(s) | 236, 521, 653, 722, 1289, 1417, 1771 |
| SchI | GAGTC | 4 cut(s) | 207, 222, 322, 1879 |
| ScrFI | CCNGG | 9 cut(s) | 218, 219, 720, 1061, 1147, 1217, 1415, 1571, 1608 |
| SduI | GDGCHC | 2 cut(s) | 1504, 1874 |
| SfaNI | GCATC | 3 cut(s) | 180, 1566, 1722 |
| SfcI | CTRYAG | 1 cut(s) | 870 |
| SinI | GGWCC | 5 cut(s) | 236, 521, 1289, 1417, 1771 |
| SmaI | CCCGGG | 1 cut(s) | 219 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 197, 486, 582, 1167 |
| SmlI | CTYRAG | 2 cut(s) | 551, 989 |
| SmoI | CTYRAG | 2 cut(s) | 551, 989 |
| SphI | GCATGC | 1 cut(s) | 1755 |
| SseBI | AGGCCT | 1 cut(s) | 1780 |
| SsiI | CCGC | 3 cut(s) | 301, 856, 1251 |
| SspI | AATATT | 1 cut(s) | 1711 |
| SspMI | CTAG | 4 cut(s) | 14, 821, 1022, 1305 |
| SstI | GAGCTC | 2 cut(s) | 1504, 1874 |
| StuI | AGGCCT | 1 cut(s) | 1780 |
| StyD4I | CCNGG | 9 cut(s) | 216, 217, 718, 1059, 1145, 1215, 1413, 1569, 1606 |
| StyI | CCWWGG | 3 cut(s) | 545, 1378, 1634 |
| TaaI | ACNGT | 7 cut(s) | 28, 179, 418, 669, 1078, 1647, 1765 |
| TaiI | ACGT | 1 cut(s) | 199 |
| TaqI | TCGA | 7 cut(s) | 93, 211, 641, 1498, 1522, 1657, 1809 |
| TatI | WGTACW | 1 cut(s) | 418 |
| TauI | GCSGC | 1 cut(s) | 1253 |
| TfiI | GAWTC | 1 cut(s) | 1829 |
| Tru1I | TTAA | 8 cut(s) | 129, 552, 566, 582, 606, 1422, 1448, 1800 |
| Tru9I | TTAA | 8 cut(s) | 129, 552, 566, 582, 606, 1422, 1448, 1800 |
| TscAI | CASTG | 6 cut(s) | 421, 493, 523, 674, 807, 1083 |
| TseFI | GTSAC | 1 cut(s) | 1602 |
| TseI | GCWGC | 3 cut(s) | 450, 901, 1235 |
| Tsp45I | GTSAC | 1 cut(s) | 1602 |
| TspDTI | ATGAA | 7 cut(s) | 17, 88, 767, 1109, 1221, 1363, 1475 |
| TspMI | CCCGGG | 1 cut(s) | 217 |
| TspRI | CASTG | 6 cut(s) | 421, 493, 523, 674, 807, 1083 |
| Vha464I | CTTAAG | 1 cut(s) | 551 |
| VpaK11BI | GGWCC | 5 cut(s) | 236, 521, 1289, 1417, 1771 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1064 |
| XapI | RAATTY | 4 cut(s) | 562, 611, 1121, 1370 |
| XceI | RCATGY | 2 cut(s) | 789, 1755 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1358, 1421 |
| XmaI | CCCGGG | 1 cut(s) | 217 |
| XspI | CTAG | 4 cut(s) | 14, 821, 1022, 1305 |