RLG00000025237

NHL repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0008360
Physical Location & Seq
Reverse (-)
43261032 .. 43270647
9616 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025237

Sequence Viewer

Length: 3243 bp
ATGGCCATGAAGCTACTCTCCCCACCCTCCTCTTCTCTCTCACAACCCACCAGGCTCTTCTGCTTACACTCCAACTCAACCAGACCAAAACCCATCTCAGTTCCAACCCTTCTCTTCCAAAGGACCCCAAAACGGTTCGTTTTCTCCAAGAGAATGGTAGTCAAAGCTTGTGTGAAAGTGGAGGAGGAGAAGAACGTTCAAGAATCTTCTGGAAGTGAGTGGGGGAAGGTCTCTGCTGTGCTGTTTGACATGGATGGAGTTCTCTGCAATAGCGAAGAGCCTTCTAGAAGGGCCGCAGTCGAAGTTTTCGCCGAAATGGGGGTTGAGACCACGGTGGAGGACTTTGTTCCTTTCGGAGGAACTGGTGAAGCAAATTTTTTAGGAGGTGTTGCTGCTGTTAAGGGGGTAAAGGGATTCGATACCGAGGCCGAAAAGAAGAGATTCTTTGAGATATATTTGGATAAGTATGCAAAACCAGATTCTGGAATAGGATACCCCGGTGCCCTTGAACTTGTTACTCAGTGTAAAAGCAAAGGCCTTAAGGTTGCTGTTGCATCCAGTGCTGATCTAATCAAGGTTAAGGCAAATCTAGCTGCTGCCAATTTACCACTTTCATTGTTTGATGCTATTGTGTCAGCAGATGCTTTTGAGAATCTGAAACCTGCTCCTGATATATTCTTGGCTGCATCAAAGATCTTGGATGTAAGCCCTAGTGAGTGTATTGTAATTGAGGATGCACTAGCTGGAGTGCAGGCTGCCAACGCTGCAAAAATGAGATGTATAGCTGTGAAAACTACTCTATCAGAAGAGGCTCTAATGAGTGCTGGTCCATCCATTATTCGAAATCAAATAGGAAATATTTCACTCGATGATATTCTCAGTGGTGGCTCTGATGGCTATAATGGGAAGATGCAGGGACTTCAATTTCTTAATTCTTCATCTCAAACCACATCAGAAAAGCTCACGGAAAGAGATACCGATTCTTCTGGTGCTGCCAATGACGGCATTTTCTCGGTTGGAGGGGTTGTTCGGCGAGATATAGTTAAATATGGAAGCTTGGGGATTGCTTTGTCTTGTCTTGCCTTCACCATATCAAACTGGAAGGCAATGCAATATGCATCACCCAACGCTATTTGGAATGTGATATTTGGGGTCAACCAGCCATCTATTGCACAGAAAGAAGGTGAATCAAAGTTGGAAAGAATCCAACAATTTGTGAACTATATATCTGACCTGGAAACCAGAGGAACTGCTCCTATTGTGCCAGAATTTCCACCAAAACTTGATTGGTTGAATACAGCTCCCATCAAGTTAAGCAAGGATCTCAAAGGAAAAGTGGTTGTGCTGGACTTTTGGACCTATTGCTGTATAAATTGTATGCATGTACTGCCAGACCTGGAATTTTTGGAGAAAAAATACAAAGATATGCCGTTCACTGTGGTGGGAGTTCATTCGGCAAAGTTTGATAATGAGAAGGATTTAGAGGCCATTCGGAATGCAGTATTACGCTATAACATCACTCACCCAGTAGTCAATGATGGAGATATGTATCTATGGAGAGAGCTAGGTGTGAATTCATGGCCAACTTTTGCTGTTGTTGGGCCCAATGGAAGACTTCTTGCTCAACTATCAGGTGAAGGTCGCCGCAAGGATCTTGATGATTTGGTGGAGGCAGCTCTTTTGTACTATGGCCGAAAGAAACTCTTGGACAATGCACCACTTCCTTTGAGTTTGGAGAAAGATAATGATCCCCGGCTGTTTACATCTCCATTAAAGTTTCCTGGAAAGCTGGCGGTTGATGTCGAAAACAATAGGCTCTTCATTTCAGACAGTAATCATAACCGCATAGTTGTAACCGACCTAGATGGAAATTTTATTGTCCAAATTGGAAGTACAGGAGAGGAAGGTCTACGTGATGGTTCTTTTGATGATGCCACCTTTAATCGGCCTCAGGGCCTGGCTTACAATACAAAAAAAAATCTTCTCTACGTCGCGGATACTGAAAACCATGCGTTGAGGGAGATTGACTTTGTTAACGAAACAGTGCGTACTCTAGCTGGAAATGGAACCAAAGGCTCTGATTACAGAGGAGGAGGAAAAGGAAGCACTCAGCTACTCAACTCTCCATGGGATGTCTGCTTTCATCCGGTCAATGAGAAAGTTTATATTGCCATGGCTGGCCAACATCAAATTTGGCAACTTGATACAGCTGATGGGATTACTAGAGCATTTAGTGGTGATGGTTATGAAAGAAATCTGAATGGATCAAGCTCTTCAAGCACATCATTTGCACAGCCTTCTGGAATTTCATTATCTCCTGATATGACGGAGCTGTATATTGCTGATAGTGAGAGTAGCTCCATCAGGGCAGTTGTTTTAAAAACAGGAGGATCGAGATTGCTAGCGGGTGGTGATCCATTTTTCTCAGACAATTTGTTTAAGTTTGGGGACCATGATGGAATGGGTTCTGAAGTACTTCTTCAACATCCACTCGGTGTCTTGTGTACAAAGGGCGGTCAAATCTATATAGCAGATAGCTATAATCACAAGATAAAGAAGCTAGATCCAGCTAGTAAAAGAGTTAGTACCATAGCAGGGACAGGGAAAGCTGGTTTCAAGGACGGAACAGCTCTTGAAGCTCAGCTTTCAGAGCCATCAGGAATCATTGAAGCAACAAATGGGAGACTCTTCATAGCCGATACAAACAACAGTCTAATCAGATATATTGACTTAAGGAACAAAGAACCTGAACTTCTTACTCTGGAGCTAAAAGGGGTTCAGCCTCCCACATCAAAATCCAAGTCTTTGAAACGCCTCAGAAGGCGCTTATCAGCTGACACACAGACCGTTACAGTTGATGGTGGTTCATCTAATGAGGGGAACCTCTATATTAAAATATCATTACCTGAAGAGTATCATTTTTCAAAGGAAGCTCGCAGTAAGTTTAGTGTTGAAACTGAGCCTGAAACTGCAGTTCTCGTTGATCCCTCAGATGGATATCTTAGTCCAGAAGGATCAGCAGTACTTCATTTTAAGAGACCCTCTCCCTCAGCTTCTGTGGGGAGAGTTAATTGCAAGGTTTACTACTGCAAAGAAGATGAGGTCTGTTTATACCAATCCTTATTATTTGAGGTACCATTCCATGAGGAAATCCCAGAATCCAACCCAGAAGAAATCACACTTGCCTACCTTGTAAAGCCCAGAACTTCAACAAACAGCTTACAGCTACCAGTTGCACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HAD_2 NHL Thioredoxin_8

Protein Analysis

1081

Amino Acids

117.8

Weight (kDa)

5.61

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase PF00702 78 - 256 8.6e-25 haloacid dehalogenase-like hydrolase
HAD_2 PF13419 80 - 263 2.2e-22 Haloacid dehalogenase-like hydrolase
Redoxin PF08534 433 - 548 8.9e-09 Redoxin
AhpC-TSA PF00578 434 - 539 1.8e-07 AhpC/TSA family
Thioredoxin_8 PF13905 444 - 538 1.2e-16 Thioredoxin-like
TEN_NHL PF25021 599 - 854 9.5e-06 Teneurin NHL domain
NHL PF01436 647 - 673 2.4e-06 NHL repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 670
Acc65I GGTACC 1 cut(s) 3133
AccB1I GGYRCC 2 cut(s) 500, 3133
AccB7I CCANNNNNTGG 1 cut(s) 482
AccI GTMKAC 1 cut(s) 1909
AccII CGCG 1 cut(s) 1994
AciI CCGC 7 cut(s) 294, 1645, 1793, 1843, 1994, 2405, 2514
AclI AACGTT 1 cut(s) 195
AclWI GGATC 9 cut(s) 1329, 1659, 1742, 2272, 2398, 2408, 2558, 2978, 3022
AcoI YGGCCR 4 cut(s) 3, 1580, 1690, 2179
AcsI RAATTY 7 cut(s) 373, 1268, 1400, 1573, 1870, 2190, 2304
AcuI CTGAAG 2 cut(s) 2490, 2928
AdeI CACNNNGTG 1 cut(s) 2495
AfaI GTAC 9 cut(s) 1386, 1685, 1894, 2050, 2475, 2506, 2587, 3024, 3135
AfiI CCNNNNNNNGG 7 cut(s) 132, 318, 356, 482, 1944, 2595, 2993
AflII CTTAAG 2 cut(s) 539, 2731
AjnI CCWGG 5 cut(s) 50, 1233, 1395, 1780, 1956
AleI CACNNNNGTG 1 cut(s) 1439
AloI GAACNNNNNNTCC 2 cut(s) 1011, 1043
Alw26I GTCTC 4 cut(s) 235, 320, 2677, 3031
AlwI GGATC 9 cut(s) 1329, 1659, 1742, 2272, 2398, 2408, 2558, 2978, 3022
AlwNI CAGNNNCTG 3 cut(s) 482, 1957, 3056
ApaI GGGCCC 1 cut(s) 1605
ApeKI GCWGC 8 cut(s) 392, 593, 596, 683, 755, 764, 992, 1673
ApoI RAATTY 7 cut(s) 373, 1268, 1400, 1573, 1870, 2190, 2304
ArsI GACNNNNNNTTYG 2 cut(s) 2786, 2818
Asp700I GAANNNNTTC 4 cut(s) 440, 859, 2464, 2475
Asp718I GGTACC 1 cut(s) 3133
AspLEI GCGC 1 cut(s) 2826
AspS9I GGNCC 8 cut(s) 123, 291, 827, 1356, 1601, 1602, 1954, 2449
AsuC2I CCSGG 2 cut(s) 498, 1753
AsuHPI GGTGA 8 cut(s) 377, 1078, 1113, 1196, 1514, 1646, 2249, 2423
AsuII TTCGAA 1 cut(s) 841
AsuNHI GCTAGC 1 cut(s) 2401
AvaII GGWCC 4 cut(s) 123, 827, 1356, 2449
AxyI CCTNAGG 1 cut(s) 1950
BaeGI GKGCMC 2 cut(s) 505, 1605
BaeI ACNNNNGTAYC 2 cut(s) 484, 517
BalI TGGCCA 3 cut(s) 5, 1582, 2181
BanI GGYRCC 2 cut(s) 500, 3133
BanII GRGCYC 1 cut(s) 1605
BbsI GAAGAC 1 cut(s) 1618
BbvCI CCTCAGC 1 cut(s) 3049
BbvI GCAGC 8 cut(s) 379, 580, 583, 670, 742, 751, 979, 1685
BceAI ACGGC 2 cut(s) 1018, 1414
BciT130I CCWGG 5 cut(s) 52, 1235, 1397, 1782, 1958
BciVI GTATCC 2 cut(s) 485, 1990
BcnI CCSGG 2 cut(s) 498, 1753
BcoDI GTCTC 4 cut(s) 235, 320, 2677, 3031
BfmI CTRYAG 1 cut(s) 2970
BfoI RGCGCY 1 cut(s) 2827
BfrI CTTAAG 2 cut(s) 539, 2731
BfuAI ACCTGC 1 cut(s) 670
BfuI GTATCC 2 cut(s) 485, 1990
BglII AGATCT 1 cut(s) 693
BlpI GCTNAGC 1 cut(s) 2640
BmcAI AGTACT 2 cut(s) 2475, 3024
Bme1390I CCNGG 7 cut(s) 52, 498, 1235, 1397, 1753, 1782, 1958
Bme18I GGWCC 4 cut(s) 123, 827, 1356, 2449
BmgT120I GGNCC 8 cut(s) 123, 291, 827, 1356, 1601, 1602, 1954, 2449
BmiI GGNNCC 7 cut(s) 125, 502, 1603, 2068, 2450, 2882, 3135
BmrFI CCNGG 7 cut(s) 52, 498, 1235, 1397, 1753, 1782, 1958
BmrI ACTGGG 1 cut(s) 1520
BmsI GCATC 8 cut(s) 563, 613, 631, 695, 724, 900, 1127, 1921
BmtI GCTAGC 1 cut(s) 2405
BmuI ACTGGG 1 cut(s) 1520
BpiI GAAGAC 1 cut(s) 1618
BplI GAGNNNNNCTC 4 cut(s) 2342, 2374, 3028, 3060
BpmI CTGGAG 2 cut(s) 765, 2783
Bpu10I CCTNAGC 1 cut(s) 3049
Bpu1102I GCTNAGC 1 cut(s) 2640
Bpu14I TTCGAA 1 cut(s) 841
BpuMI CCSGG 2 cut(s) 498, 1753
BsaAI YACGTR 1 cut(s) 1913
BsaBI GATNNNNATC 3 cut(s) 1548, 1746, 2997
BsaI GGTCTC 3 cut(s) 235, 320, 3031
BsaJI CCNNGG 6 cut(s) 330, 423, 496, 1751, 2126, 2172
BsaWI WCCGGW 1 cut(s) 2146
BsaXI ACNNNNNCTCC 2 cut(s) 1011, 1041
Bsc4I CCNNNNNNNGG 7 cut(s) 132, 318, 356, 482, 1944, 2595, 2993
Bse1I ACTGG 5 cut(s) 367, 558, 1103, 1526, 3230
Bse21I CCTNAGG 1 cut(s) 1950
Bse3DI GCAATG 1 cut(s) 1113
Bse8I GATNNNNATC 3 cut(s) 1548, 1746, 2997
BseBI CCWGG 5 cut(s) 52, 1235, 1397, 1782, 1958
BseDI CCNNGG 6 cut(s) 330, 423, 496, 1751, 2126, 2172
BseGI GGATG 8 cut(s) 259, 554, 706, 739, 830, 2137, 2143, 2485
BseJI GATNNNNATC 3 cut(s) 1548, 1746, 2997
BseLI CCNNNNNNNGG 7 cut(s) 132, 318, 356, 482, 1944, 2595, 2993
BseMI GCAATG 1 cut(s) 1113
BseNI ACTGG 5 cut(s) 367, 558, 1103, 1526, 3230
BseRI GAGGAG 5 cut(s) 19, 197, 200, 2103, 2106
BseSI GKGCMC 2 cut(s) 505, 1605
BseXI GCAGC 8 cut(s) 379, 580, 583, 670, 742, 751, 979, 1685
BsgI GTGCAG 1 cut(s) 770
Bsh1236I CGCG 1 cut(s) 1994
BshNI GGYRCC 2 cut(s) 500, 3133
BsiSI CCGG 3 cut(s) 498, 1753, 2147
BslFI GGGAC 3 cut(s) 930, 2462, 2611
BslI CCNNNNNNNGG 7 cut(s) 132, 318, 356, 482, 1944, 2595, 2993
BsmAI GTCTC 4 cut(s) 235, 320, 2677, 3031
BsmFI GGGAC 3 cut(s) 930, 2462, 2611
BsmI GAATGC 1 cut(s) 1501
Bso31I GGTCTC 3 cut(s) 235, 320, 3031
Bsp119I TTCGAA 1 cut(s) 841
Bsp120I GGGCCC 1 cut(s) 1601
Bsp1286I GDGCHC 2 cut(s) 505, 1605
Bsp1407I TGTACA 1 cut(s) 2504
Bsp1720I GCTNAGC 1 cut(s) 2640
Bsp19I CCATGG 2 cut(s) 2126, 2172
BspACI CCGC 7 cut(s) 294, 1645, 1793, 1843, 1994, 2405, 2514
BspFNI CGCG 1 cut(s) 1994
BspLI GGNNCC 7 cut(s) 125, 502, 1603, 2068, 2450, 2882, 3135
BspMAI CTGCAG 1 cut(s) 2974
BspMI ACCTGC 1 cut(s) 670
BspOI GCTAGC 1 cut(s) 2405
BspPI GGATC 9 cut(s) 1329, 1659, 1742, 2272, 2398, 2408, 2558, 2978, 3022
BspQI GCTCTTC 4 cut(s) 62, 270, 1823, 2278
BspT104I TTCGAA 1 cut(s) 841
BspT107I GGYRCC 2 cut(s) 500, 3133
BspTI CTTAAG 2 cut(s) 539, 2731
BspTNI GGTCTC 3 cut(s) 235, 320, 3031
BsrDI GCAATG 1 cut(s) 1113
BsrGI TGTACA 1 cut(s) 2504
BsrI ACTGG 5 cut(s) 367, 558, 1103, 1526, 3230
BssECI CCNNGG 6 cut(s) 330, 423, 496, 1751, 2126, 2172
BssT1I CCWWGG 2 cut(s) 2126, 2172
Bst2UI CCWGG 5 cut(s) 52, 1235, 1397, 1782, 1958
Bst4CI ACNGT 8 cut(s) 135, 334, 1438, 1832, 2044, 2711, 2848, 2854
BstAFI CTTAAG 2 cut(s) 539, 2731
BstAPI GCANNNNNTGC 2 cut(s) 560, 1387
BstAUI TGTACA 1 cut(s) 2504
BstBAI YACGTR 1 cut(s) 1913
BstBI TTCGAA 1 cut(s) 841
BstC8I GCNNGC 6 cut(s) 753, 1791, 2179, 2403, 2935, 3238
BstDSI CCRYGG 3 cut(s) 330, 2126, 2172
BstENI CCTNNNNNAGG 1 cut(s) 354
BstF5I GGATG 8 cut(s) 259, 554, 706, 739, 830, 2137, 2143, 2485
BstFNI CGCG 1 cut(s) 1994
BstH2I RGCGCY 1 cut(s) 2827
BstHHI GCGC 1 cut(s) 2826
BstMAI GTCTC 4 cut(s) 235, 320, 2677, 3031
BstMWI GCNNNNNNNGC 9 cut(s) 560, 590, 761, 764, 894, 1387, 2277, 2636, 2650
BstNI CCWGG 5 cut(s) 52, 1235, 1397, 1782, 1958
BstNSI RCATGY 1 cut(s) 1385
BstSCI CCNGG 7 cut(s) 50, 496, 1233, 1395, 1751, 1780, 1956
BstSFI CTRYAG 1 cut(s) 2970
BstSLI GKGCMC 2 cut(s) 505, 1605
BstUI CGCG 1 cut(s) 1994
BstV1I GCAGC 8 cut(s) 379, 580, 583, 670, 742, 751, 979, 1685
BstV2I GAAGAC 1 cut(s) 1618
BstX2I RGATCY 4 cut(s) 693, 1321, 1651, 2563
BstXI CCANNNNNNTGG 1 cut(s) 154
BstYI RGATCY 4 cut(s) 693, 1321, 1651, 2563
Bsu36I CCTNAGG 1 cut(s) 1950
BsuI GTATCC 2 cut(s) 485, 1990
BtgI CCRYGG 3 cut(s) 330, 2126, 2172
BtsCI GGATG 8 cut(s) 259, 554, 706, 739, 830, 2137, 2143, 2485
BtsIMutI CAGTG 5 cut(s) 527, 565, 886, 1434, 2049
BveI ACCTGC 1 cut(s) 670
Cac8I GCNNGC 6 cut(s) 753, 1791, 2179, 2403, 2935, 3238
CaiI CAGNNNCTG 3 cut(s) 482, 1957, 3056
CfoI GCGC 1 cut(s) 2826
Cfr13I GGNCC 8 cut(s) 123, 291, 827, 1356, 1601, 1602, 1954, 2449
Csp6I GTAC 9 cut(s) 1385, 1684, 1893, 2049, 2474, 2505, 2586, 3023, 3134
CspCI CAANNNNNGTGG 4 cut(s) 597, 632, 1707, 1742
CviAII CATG 9 cut(s) 7, 250, 1382, 1578, 2009, 2127, 2173, 2453, 3143
CviQI GTAC 9 cut(s) 1385, 1684, 1893, 2049, 2474, 2505, 2586, 3023, 3134
DraI TTTAAA 1 cut(s) 2379
DraIII CACNNNGTG 1 cut(s) 2495
EaeI YGGCCR 4 cut(s) 3, 1580, 1690, 2179
Eco130I CCWWGG 2 cut(s) 2126, 2172
Eco147I AGGCCT 1 cut(s) 537
Eco24I GRGCYC 1 cut(s) 1605
Eco31I GGTCTC 3 cut(s) 235, 320, 3031
Eco32I GATATC 1 cut(s) 2999
Eco47I GGWCC 4 cut(s) 123, 827, 1356, 2449
Eco57I CTGAAG 2 cut(s) 2490, 2928
Eco81I CCTNAGG 1 cut(s) 1950
EcoNI CCTNNNNNAGG 1 cut(s) 354
EcoO109I RGGNCCY 2 cut(s) 123, 1954
EcoRI GAATTC 1 cut(s) 1573
EcoRII CCWGG 5 cut(s) 50, 1233, 1395, 1780, 1956
EcoRV GATATC 1 cut(s) 2999
EcoT14I CCWWGG 2 cut(s) 2126, 2172
EcoT22I ATGCAT 2 cut(s) 1120, 1383
EcoT38I GRGCYC 1 cut(s) 1605
ErhI CCWWGG 2 cut(s) 2126, 2172
FaeI CATG 9 cut(s) 10, 253, 1385, 1581, 2012, 2130, 2176, 2456, 3146
FalI AAGNNNNNCTT 8 cut(s) 428, 460, 1688, 1720, 2463, 2495, 2628, 2660
FaqI GGGAC 3 cut(s) 930, 2462, 2611
FatI CATG 9 cut(s) 6, 249, 1381, 1577, 2008, 2126, 2172, 2452, 3142
FauI CCCGC 1 cut(s) 2398
FblI GTMKAC 1 cut(s) 1909
FokI GGATG 8 cut(s) 266, 541, 713, 746, 817, 2130, 2144, 2472
FriOI GRGCYC 1 cut(s) 1605
GlaI GCGC 1 cut(s) 2825
GsuI CTGGAG 2 cut(s) 765, 2783
HaeII RGCGCY 1 cut(s) 2827
HapII CCGG 3 cut(s) 498, 1753, 2147
HhaI GCGC 1 cut(s) 2826
Hin1II CATG 9 cut(s) 10, 253, 1385, 1581, 2012, 2130, 2176, 2456, 3146
Hin6I GCGC 1 cut(s) 2824
HinP1I GCGC 1 cut(s) 2824
HincII GTYRAC 2 cut(s) 1156, 2035
HindII GTYRAC 2 cut(s) 1156, 2035
HindIII AAGCTT 2 cut(s) 165, 1054
HpaI GTTAAC 1 cut(s) 2035
HpaII CCGG 3 cut(s) 498, 1753, 2147
HphI GGTGA 8 cut(s) 377, 1078, 1113, 1196, 1514, 1646, 2249, 2423
Hpy166II GTNNAC 8 cut(s) 1156, 1219, 1434, 1761, 1910, 2035, 2505, 3082
Hpy8I GTNNAC 8 cut(s) 1156, 1219, 1434, 1761, 1910, 2035, 2505, 3082
Hpy99I CGWCG 1 cut(s) 1994
HpyCH4III ACNGT 8 cut(s) 135, 334, 1438, 1832, 2044, 2711, 2848, 2854
HpyCH4IV ACGT 3 cut(s) 195, 1912, 1989
HpyF10VI GCNNNNNNNGC 9 cut(s) 560, 590, 761, 764, 894, 1387, 2277, 2636, 2650
HpySE526I ACGT 3 cut(s) 195, 1912, 1989
Hsp92II CATG 9 cut(s) 10, 253, 1385, 1581, 2012, 2130, 2176, 2456, 3146
HspAI GCGC 1 cut(s) 2824
KpnI GGTACC 1 cut(s) 3137
KspAI GTTAAC 1 cut(s) 2035
LguI GCTCTTC 4 cut(s) 62, 270, 1823, 2278
LmnI GCTCC 6 cut(s) 670, 1258, 1306, 2329, 2363, 2764
Lsp1109I GCAGC 8 cut(s) 379, 580, 583, 670, 742, 751, 979, 1685
LweI GCATC 8 cut(s) 563, 613, 631, 695, 724, 900, 1127, 1921
MaeII ACGT 3 cut(s) 195, 1912, 1989
MaeIII GTNAC 3 cut(s) 514, 1852, 2848
MflI RGATCY 4 cut(s) 693, 1321, 1651, 2563
MhlI GDGCHC 2 cut(s) 505, 1605
MlsI TGGCCA 3 cut(s) 5, 1582, 2181
MluNI TGGCCA 3 cut(s) 5, 1582, 2181
MlyI GAGTC 1 cut(s) 2679
MmeI TCCRAC 6 cut(s) 96, 128, 997, 1176, 1231, 3186
Mox20I TGGCCA 3 cut(s) 5, 1582, 2181
Mph1103I ATGCAT 2 cut(s) 1120, 1383
MroXI GAANNNNTTC 4 cut(s) 440, 859, 2464, 2475
MscI TGGCCA 3 cut(s) 5, 1582, 2181
MslI CAYNNNNRTG 1 cut(s) 1439
Msp20I TGGCCA 3 cut(s) 5, 1582, 2181
MspA1I CMGCKG 2 cut(s) 2210, 2834
MspCI CTTAAG 2 cut(s) 539, 2731
MspI CCGG 3 cut(s) 498, 1753, 2147
MspR9I CCNGG 7 cut(s) 52, 498, 1235, 1397, 1753, 1782, 1958
Mva1269I GAATGC 1 cut(s) 1501
MvaI CCWGG 5 cut(s) 52, 1235, 1397, 1782, 1958
MvnI CGCG 1 cut(s) 1994
MwoI GCNNNNNNNGC 9 cut(s) 560, 590, 761, 764, 894, 1387, 2277, 2636, 2650
NciI CCSGG 2 cut(s) 498, 1753
NcoI CCATGG 2 cut(s) 2126, 2172
NheI GCTAGC 1 cut(s) 2401
NlaIII CATG 9 cut(s) 10, 253, 1385, 1581, 2012, 2130, 2176, 2456, 3146
NlaIV GGNNCC 7 cut(s) 125, 502, 1603, 2068, 2450, 2882, 3135
NsiI ATGCAT 2 cut(s) 1120, 1383
NspI RCATGY 1 cut(s) 1385
NspV TTCGAA 1 cut(s) 841
OliI CACNNNNGTG 1 cut(s) 1439
PceI AGGCCT 1 cut(s) 537
PciSI GCTCTTC 4 cut(s) 62, 270, 1823, 2278
PctI GAATGC 1 cut(s) 1501
PdmI GAANNNNTTC 4 cut(s) 440, 859, 2464, 2475
PflMI CCANNNNNTGG 1 cut(s) 482
PfoI TCCNGGA 1 cut(s) 1780
PleI GAGTC 1 cut(s) 2679
PpsI GAGTC 1 cut(s) 2679
Ppu21I YACGTR 1 cut(s) 1913
PpuMI RGGWCCY 1 cut(s) 123
Psp1406I AACGTT 1 cut(s) 195
Psp5II RGGWCCY 1 cut(s) 123
Psp6I CCWGG 5 cut(s) 50, 1233, 1395, 1780, 1956
PspGI CCWGG 5 cut(s) 50, 1233, 1395, 1780, 1956
PspN4I GGNNCC 7 cut(s) 125, 502, 1603, 2068, 2450, 2882, 3135
PspOMI GGGCCC 1 cut(s) 1601
PspPI GGNCC 8 cut(s) 123, 291, 827, 1356, 1601, 1602, 1954, 2449
PspPPI RGGWCCY 1 cut(s) 123
PstI CTGCAG 1 cut(s) 2974
PstNI CAGNNNCTG 3 cut(s) 482, 1957, 3056
PsuI RGATCY 4 cut(s) 693, 1321, 1651, 2563
PvuII CAGCTG 2 cut(s) 2210, 2834
RsaI GTAC 9 cut(s) 1386, 1685, 1894, 2050, 2475, 2506, 2587, 3024, 3135
RsaNI GTAC 9 cut(s) 1385, 1684, 1893, 2049, 2474, 2505, 2586, 3023, 3134
RseI CAYNNNNRTG 1 cut(s) 1439
SapI GCTCTTC 4 cut(s) 62, 270, 1823, 2278
Sau96I GGNCC 8 cut(s) 123, 291, 827, 1356, 1601, 1602, 1954, 2449
ScaI AGTACT 2 cut(s) 2475, 3024
SchI GAGTC 1 cut(s) 2679
ScrFI CCNGG 7 cut(s) 52, 498, 1235, 1397, 1753, 1782, 1958
SduI GDGCHC 2 cut(s) 505, 1605
SfaNI GCATC 8 cut(s) 563, 613, 631, 695, 724, 900, 1127, 1921
SfcI CTRYAG 1 cut(s) 2970
SfuI TTCGAA 1 cut(s) 841
SinI GGWCC 4 cut(s) 123, 827, 1356, 2449
SmiMI CAYNNNNRTG 1 cut(s) 1439
SmlI CTYRAG 2 cut(s) 539, 2731
SmoI CTYRAG 2 cut(s) 539, 2731
SseBI AGGCCT 1 cut(s) 537
SsiI CCGC 7 cut(s) 294, 1645, 1793, 1843, 1994, 2405, 2514
SspI AATATT 1 cut(s) 859
StuI AGGCCT 1 cut(s) 537
StyD4I CCNGG 7 cut(s) 50, 496, 1233, 1395, 1751, 1780, 1956
StyI CCWWGG 2 cut(s) 2126, 2172
TaaI ACNGT 8 cut(s) 135, 334, 1438, 1832, 2044, 2711, 2848, 2854
TaiI ACGT 3 cut(s) 198, 1915, 1992
TaqI TCGA 6 cut(s) 300, 417, 841, 867, 1803, 2393
TatI WGTACW 6 cut(s) 1384, 1683, 1892, 2473, 2504, 3022
TauI GCSGC 2 cut(s) 296, 1647
TscAI CASTG 5 cut(s) 527, 565, 886, 1441, 2049
TseI GCWGC 8 cut(s) 392, 593, 596, 683, 755, 764, 992, 1673
TspGWI ACGGA 3 cut(s) 980, 2342, 2637
TspRI CASTG 5 cut(s) 527, 565, 886, 1441, 2049
Van91I CCANNNNNTGG 1 cut(s) 482
Vha464I CTTAAG 2 cut(s) 539, 2731
VpaK11BI GGWCC 4 cut(s) 123, 827, 1356, 2449
XagI CCTNNNNNAGG 1 cut(s) 354
XapI RAATTY 7 cut(s) 373, 1268, 1400, 1573, 1870, 2190, 2304
XbaI TCTAGA 1 cut(s) 284
XceI RCATGY 1 cut(s) 1385
XcmI CCANNNNNNNNNTGG 1 cut(s) 1284
XmiI GTMKAC 1 cut(s) 1909
XmnI GAANNNNTTC 4 cut(s) 440, 859, 2464, 2475
ZrmI AGTACT 2 cut(s) 2475, 3024
Zsp2I ATGCAT 2 cut(s) 1120, 1383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.