Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0008360

Physical Location & Seq

Genomic Coordinates Reverse (-)

43068384 .. 43078382

Gene Structure 9999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00422050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGATATTCTCAGTGGTGGCTCTGATGGCTATAATGGGAAGATGCAGGGACTTCAATTTCTTAATTCTTCATCTCAAACCACATCAGAAAAGCTCACGGAAAGAGATACTGATTCTTCTGGTGCTGCCAATGACGGCATTTTCTCGTTTGGAGGGTTTCAGGGTTGTTCGGCGAGATATAGTGAAATATGGAAGCTTGGGGATTGCTTTGTCTTGTCTTGCCTTCACCATATCAAACTGGAAGGCAATGCAATATGCATCACCTAACGCTATTTGGAATGTGATATTTGGGGTCAACCAGCCATATATTGCACAGAAAGAAGGTGAATCAAAGTTGGAAAGAATCCAACAATTTGTGAACTATATATCTGACCTGGAAACCAGAGGAACTGCTCCTATTGTGCCAGAATTTCCACCAAAACTTGATTGGTTGAATACAGCTCCCATCAAGTTAAGCAAGGATCTCAAAGGAAAAGTGGTTGTGCTGGACTTTTGGACCTATTGCTGTATAAATTGTATGCATGTACTGCCAGACCTGGAGTTTTTGGAGAAAAAATACAAAGACATGCCGTTCACTGTGGTGGGAGTTCATTCGGCAAAATTTGATAATGAGAAGGATTTAGAGGCCATTCGGAATGCAGTGTTACGCTATAACATCACTCACCCAGTAGTCAATGATGGAGATATGTATCTATGGAGAGAGCTAGGTGTGAATTCATGGCCAACTTTTGCTGTTGTTGGGCCCAATGGAAGACTTCTTGCTCAACTATCAGGTGAAGGCCGCCGCAAGGATCTTGATGATTTGGTGGAGGCAGCTCTTTTGTACTATGGCCGAAAGAAAATCTTGGACAATGCACCAATTCCTTTGAGTTTGGAGAAAGATAATGATCCCCGTCTGTTTACATCTCCATTAAAGTTTCCTGGAAAGCTGGCGGTTGATGTCGAAAACAATAGGCTCTTCATTTCAGACAGTAATCATAACCGCATAGTTGTAACCGACCTAGATGGAAATTTTATTGTCCAAATTGGAAGTACAGGAGAGGAAGGTCTACGTGATGGTTCTTTTGATGATGCCACCTTTAATCGGCCTCAGGGCCTGGCTTACAATACAAAAAAAAATCTTCTCTACGTCGCGGATACTGAAAACCATGCGTTGAGGGAGATTGACTTTGTTAACGAAACAGTGCGTACTCTAGCTGGAAATGGAACCAAAGGCTCTGATTACAGAGGAGGAGGAAAAGGAAGCACTCAGCTACTCAACTCTCCATGGGATGTCTGCTTTCATCCATTCAATGAGAAAGTTTATATTGCCATGGCTGGCCAACATCAAATTTGGCAACTTGATACAGCTGATGGGATTACTAGAGCATTTAGTGGTGATGGGTATGAAAGAAATCTGAATGGATCAAGCTCTTCAAGCACATCATTTGCACAGCCTTCCGGAATTTCATTATCTCCAGATATGACGGAGCTGTATATTGCTGATAGTGAGAGTAGCTCCATCAGGGCAGTTGTTTTAAAAACAGGAGGATCGAGATTGCTAGCGGGTGGTGATCCAGTTTTCTCAGACAATTTGTTTAAGTTTGGGGACCATGATGGAATGGGTTCTGAAGTACTTCTTCAACATCCACTCGGTGTCTTGTGTACAAAGGGCGGTCAAATCTATATAGCAGATAGCTATAATCATAAGATAAAGAAGCTAGATCCAGCTAGTAAAAGAGTTAGTACCATAGCAGGGACAGGGAAAGCTGGTTTCAAGGACGGAACAGCTCTTGAAGCTCAGGGGAGACTCTTCATAGCCGATACAAACAACAGTCTAATCAGATATATTGACTTAAGCAACAAAGAACCTGAACTTCTTACTCTGGAGCTAAAAGGGGTTCAGCCTCCCACAGCAAAATCCAAGTCTTTGAAACGCCTCAGAAGGCGCTCATCAGCTGACACACAGACCGAAGCTCGCAGTAAGTTTAGTGTTGAAACTGAGCCTGAAACTGCAGTTCTCGTTGATCCCTCAGATGGATATCTTAGTCCAGAAGGATCAGCAGTACTTCATTTTAAGAGGCCTTCTCCCTCAGCTTCTGTGGGGAGAGTTAATTGCACGGTTTACTATTGCAAAGAAGATGAGGTCTGTTTATACCAATCCTTATTATTTGAGGTACCATTCCATGAGGAAATTCCAGAATCCAACCCAGAAGAAATCACACTTGCCTACCTTGTAAAGCCCAGAACTTCAACAGACAGCTTACAGCTACCAGTTGCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAD_2 NHL Thioredoxin_8

Protein Analysis

754

Amino Acids

83.72

Weight (kDa)

6.32

Isoelectric Point (pI)

36.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Redoxin	PF08534	146 - 261	5.3e-09	Redoxin
AhpC-TSA	PF00578	147 - 252	1.1e-07	AhpC/TSA family
Thioredoxin_8	PF13905	157 - 251	7.4e-17	Thioredoxin-like
TEN_NHL	PF25021	312 - 567	8.7e-06	Teneurin NHL domain
NHL	PF01436	360 - 386	1.6e-06	NHL repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56500 AT1G56500 AT1G56500
fragaria_vesca	FvH4_6g07620 FvH4_6g07620 FvH4_6g07620 FvH4_6g07620 FvH4_6g07620
malus_domestica	MD12G1204700.v1.1
prunus_persica	Prupe.6G311900_v2.0.a1
pyrus_communis	pycom12g19260
rosa_chinensis	RchiOBHm_Chr3g0457281
rosa_laevigata	RLG00000025237
rosa_multiflora	Rmu_co8517633.1_g000003 Rmu_sc0005442.1_g000013
rosa_roxburghii	Rroxscaffold_6G00422020 Rroxscaffold_6G00422050
rosa_rugosa	Rorug03G0019600
rosa_samantha	Rh3AG079700 Rh3BG081400 Rh3CG081800 Rh3DG083400
rosa_wichuraiana	Rw3G006870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2155
AccB1I	GGYRCC	1 cut(s)	2155
AccI	GTMKAC	1 cut(s)	1048
AccII	CGCG	1 cut(s)	1133
AccIII	TCCGGA	1 cut(s)	1439
AciI	CCGC	7 cut(s)	781, 784, 932, 982, 1133, 1544, 1653
AclWI	GGATC	9 cut(s)	468, 798, 881, 1411, 1537, 1547, 1697, 2000, 2044
AcoI	YGGCCR	3 cut(s)	719, 829, 1318
AcsI	RAATTY	7 cut(s)	407, 599, 712, 1009, 1329, 1443, 2172
AcuI	CTGAAG	1 cut(s)	1629
AdeI	CACNNNGTG	1 cut(s)	1634
AfaI	GTAC	9 cut(s)	525, 824, 1033, 1189, 1614, 1645, 1726, 2046, 2157
AfiI	CCNNNNNNNGG	4 cut(s)	787, 1083, 1734, 2015
AflII	CTTAAG	1 cut(s)	1834
AjnI	CCWGG	4 cut(s)	372, 534, 919, 1095
AleI	CACNNNNGTG	1 cut(s)	578
Alw26I	GTCTC	1 cut(s)	1780
AlwI	GGATC	9 cut(s)	468, 798, 881, 1411, 1537, 1547, 1697, 2000, 2044
AlwNI	CAGNNNCTG	2 cut(s)	1096, 2078
Aor13HI	TCCGGA	1 cut(s)	1439
AoxI	GGCC	9 cut(s)	624, 719, 740, 778, 829, 1085, 1093, 1318, 2060
ApaI	GGGCCC	1 cut(s)	744
ApeKI	GCWGC	2 cut(s)	124, 812
ApoI	RAATTY	7 cut(s)	407, 599, 712, 1009, 1329, 1443, 2172
ArsI	GACNNNNNNTTYG	2 cut(s)	1889, 1921
Asp700I	GAANNNNTTC	2 cut(s)	1603, 1614
Asp718I	GGTACC	1 cut(s)	2155
AspLEI	GCGC	1 cut(s)	1929
AspS9I	GGNCC	5 cut(s)	495, 740, 741, 1093, 1588
AsuHPI	GGTGA	7 cut(s)	217, 252, 335, 653, 785, 1388, 1562
AsuNHI	GCTAGC	1 cut(s)	1540
AvaII	GGWCC	2 cut(s)	495, 1588
AxyI	CCTNAGG	1 cut(s)	1089
BaeGI	GKGCMC	1 cut(s)	744
BalI	TGGCCA	2 cut(s)	721, 1320
BanI	GGYRCC	1 cut(s)	2155
BanII	GRGCYC	1 cut(s)	744
BbsI	GAAGAC	1 cut(s)	757
BbvCI	CCTCAGC	1 cut(s)	2071
BbvI	GCAGC	2 cut(s)	111, 824
BceAI	ACGGC	2 cut(s)	150, 553
BciT130I	CCWGG	4 cut(s)	374, 536, 921, 1097
BciVI	GTATCC	1 cut(s)	1129
BcoDI	GTCTC	1 cut(s)	1780
BfaI	CTAG	7 cut(s)	704, 1001, 1193, 1362, 1541, 1700, 1710
BfmI	CTRYAG	1 cut(s)	1992
BfoI	RGCGCY	1 cut(s)	1930
BfrI	CTTAAG	1 cut(s)	1834
BfuI	GTATCC	1 cut(s)	1129
BisI	GCNGC	4 cut(s)	125, 781, 784, 813
BlsI	GCNGC	4 cut(s)	126, 782, 785, 814
BmcAI	AGTACT	2 cut(s)	1614, 2046
Bme1390I	CCNGG	4 cut(s)	374, 536, 921, 1097
Bme18I	GGWCC	2 cut(s)	495, 1588
BmgT120I	GGNCC	5 cut(s)	495, 740, 741, 1093, 1588
BmiI	GGNNCC	4 cut(s)	742, 1207, 1589, 2157
BmrFI	CCNGG	4 cut(s)	374, 536, 921, 1097
BmrI	ACTGGG	1 cut(s)	659
BmsI	GCATC	3 cut(s)	32, 266, 1060
BmtI	GCTAGC	1 cut(s)	1544
BmuI	ACTGGG	1 cut(s)	659
BpiI	GAAGAC	1 cut(s)	757
BplI	GAGNNNNNCTC	4 cut(s)	1481, 1513, 2050, 2082
BpmI	CTGGAG	3 cut(s)	557, 1440, 1886
Bpu10I	CCTNAGC	2 cut(s)	1779, 2071
BsaAI	YACGTR	1 cut(s)	1052
BsaBI	GATNNNNATC	3 cut(s)	687, 885, 2019
BsaJI	CCNNGG	2 cut(s)	1265, 1311
BsaWI	WCCGGW	1 cut(s)	1439
Bsc4I	CCNNNNNNNGG	4 cut(s)	787, 1083, 1734, 2015
Bse1I	ACTGG	4 cut(s)	242, 665, 1556, 2252
Bse21I	CCTNAGG	1 cut(s)	1089
Bse3DI	GCAATG	1 cut(s)	252
Bse8I	GATNNNNATC	3 cut(s)	687, 885, 2019
BseAI	TCCGGA	1 cut(s)	1439
BseBI	CCWGG	4 cut(s)	374, 536, 921, 1097
BseDI	CCNNGG	2 cut(s)	1265, 1311
BseGI	GGATG	3 cut(s)	1276, 1282, 1624
BseJI	GATNNNNATC	3 cut(s)	687, 885, 2019
BseLI	CCNNNNNNNGG	4 cut(s)	787, 1083, 1734, 2015
BseMI	GCAATG	1 cut(s)	252
BseMII	CTCAG	9 cut(s)	24, 1103, 1262, 1578, 1793, 1933, 1971, 2025, 2085
BseNI	ACTGG	4 cut(s)	242, 665, 1556, 2252
BseRI	GAGGAG	2 cut(s)	1242, 1245
BseSI	GKGCMC	1 cut(s)	744
BseXI	GCAGC	2 cut(s)	111, 824
Bsh1236I	CGCG	1 cut(s)	1133
BshFI	GGCC	9 cut(s)	626, 721, 742, 780, 831, 1087, 1095, 1320, 2062
BshNI	GGYRCC	1 cut(s)	2155
BsiSI	CCGG	1 cut(s)	1440
BslFI	GGGAC	3 cut(s)	62, 1601, 1750
BslI	CCNNNNNNNGG	4 cut(s)	787, 1083, 1734, 2015
BsmAI	GTCTC	1 cut(s)	1780
BsmFI	GGGAC	3 cut(s)	62, 1601, 1750
BsmI	GAATGC	1 cut(s)	640
BsnI	GGCC	9 cut(s)	626, 721, 742, 780, 831, 1087, 1095, 1320, 2062
Bsp120I	GGGCCC	1 cut(s)	740
Bsp1286I	GDGCHC	1 cut(s)	744
Bsp13I	TCCGGA	1 cut(s)	1439
Bsp1407I	TGTACA	1 cut(s)	1643
Bsp143I	GATC	9 cut(s)	460, 790, 886, 1403, 1529, 1552, 1702, 2005, 2036
Bsp19I	CCATGG	2 cut(s)	1265, 1311
BspACI	CCGC	7 cut(s)	781, 784, 932, 982, 1133, 1544, 1653
BspANI	GGCC	9 cut(s)	626, 721, 742, 780, 831, 1087, 1095, 1320, 2062
BspCNI	CTCAG	9 cut(s)	23, 1102, 1261, 1577, 1792, 1932, 1972, 2024, 2084
BspEI	TCCGGA	1 cut(s)	1439
BspFNI	CGCG	1 cut(s)	1133
BspLI	GGNNCC	4 cut(s)	742, 1207, 1589, 2157
BspMAI	CTGCAG	1 cut(s)	1996
BspOI	GCTAGC	1 cut(s)	1544
BspPI	GGATC	9 cut(s)	468, 798, 881, 1411, 1537, 1547, 1697, 2000, 2044
BspQI	GCTCTTC	2 cut(s)	962, 1417
BspT107I	GGYRCC	1 cut(s)	2155
BspTI	CTTAAG	1 cut(s)	1834
BsrDI	GCAATG	1 cut(s)	252
BsrGI	TGTACA	1 cut(s)	1643
BsrI	ACTGG	4 cut(s)	242, 665, 1556, 2252
BssECI	CCNNGG	2 cut(s)	1265, 1311
BssMI	GATC	9 cut(s)	460, 790, 886, 1403, 1529, 1552, 1702, 2005, 2036
BssT1I	CCWWGG	2 cut(s)	1265, 1311
Bst2UI	CCWGG	4 cut(s)	374, 536, 921, 1097
Bst4CI	ACNGT	5 cut(s)	577, 971, 1183, 1814, 2101
Bst6I	CTCTTC	3 cut(s)	962, 1417, 1796
BstAFI	CTTAAG	1 cut(s)	1834
BstAPI	GCANNNNNTGC	1 cut(s)	526
BstAUI	TGTACA	1 cut(s)	1643
BstBAI	YACGTR	1 cut(s)	1052
BstC8I	GCNNGC	5 cut(s)	930, 1318, 1542, 1957, 2260
BstDSI	CCRYGG	2 cut(s)	1265, 1311
BstF5I	GGATG	3 cut(s)	1276, 1282, 1624
BstFNI	CGCG	1 cut(s)	1133
BstH2I	RGCGCY	1 cut(s)	1930
BstHHI	GCGC	1 cut(s)	1929
BstKTI	GATC	9 cut(s)	463, 793, 889, 1406, 1532, 1555, 1705, 2008, 2039
BstMAI	GTCTC	1 cut(s)	1780
BstMBI	GATC	9 cut(s)	460, 790, 886, 1403, 1529, 1552, 1702, 2005, 2036
BstMWI	GCNNNNNNNGC	4 cut(s)	26, 526, 1416, 1775
BstNI	CCWGG	4 cut(s)	374, 536, 921, 1097
BstNSI	RCATGY	2 cut(s)	524, 568
BstSCI	CCNGG	4 cut(s)	372, 534, 919, 1095
BstSFI	CTRYAG	1 cut(s)	1992
BstSLI	GKGCMC	1 cut(s)	744
BstUI	CGCG	1 cut(s)	1133
BstV1I	GCAGC	2 cut(s)	111, 824
BstV2I	GAAGAC	1 cut(s)	757
BstX2I	RGATCY	3 cut(s)	460, 790, 1702
BstYI	RGATCY	3 cut(s)	460, 790, 1702
Bsu36I	CCTNAGG	1 cut(s)	1089
BsuI	GTATCC	1 cut(s)	1129
BsuRI	GGCC	9 cut(s)	626, 721, 742, 780, 831, 1087, 1095, 1320, 2062
BtgI	CCRYGG	2 cut(s)	1265, 1311
BtsCI	GGATG	3 cut(s)	1276, 1282, 1624
BtsI	GCAGTG	1 cut(s)	645
BtsIMutI	CAGTG	4 cut(s)	18, 573, 645, 1188
Cac8I	GCNNGC	5 cut(s)	930, 1318, 1542, 1957, 2260
CaiI	CAGNNNCTG	2 cut(s)	1096, 2078
CfoI	GCGC	1 cut(s)	1929
Cfr13I	GGNCC	5 cut(s)	495, 740, 741, 1093, 1588
Csp6I	GTAC	9 cut(s)	524, 823, 1032, 1188, 1613, 1644, 1725, 2045, 2156
CviAII	CATG	8 cut(s)	521, 565, 717, 1148, 1266, 1312, 1592, 2165
CviQI	GTAC	9 cut(s)	524, 823, 1032, 1188, 1613, 1644, 1725, 2045, 2156
DpnI	GATC	9 cut(s)	462, 792, 888, 1405, 1531, 1554, 1704, 2007, 2038
DpnII	GATC	9 cut(s)	460, 790, 886, 1403, 1529, 1552, 1702, 2005, 2036
DraI	TTTAAA	1 cut(s)	1518
DraIII	CACNNNGTG	1 cut(s)	1634
EaeI	YGGCCR	3 cut(s)	719, 829, 1318
Eam1104I	CTCTTC	3 cut(s)	962, 1417, 1796
EarI	CTCTTC	3 cut(s)	962, 1417, 1796
Eco130I	CCWWGG	2 cut(s)	1265, 1311
Eco147I	AGGCCT	1 cut(s)	2062
Eco24I	GRGCYC	1 cut(s)	744
Eco32I	GATATC	1 cut(s)	2021
Eco47I	GGWCC	2 cut(s)	495, 1588
Eco57I	CTGAAG	1 cut(s)	1629
Eco81I	CCTNAGG	1 cut(s)	1089
EcoO109I	RGGNCCY	1 cut(s)	1093
EcoRI	GAATTC	1 cut(s)	712
EcoRII	CCWGG	4 cut(s)	372, 534, 919, 1095
EcoRV	GATATC	1 cut(s)	2021
EcoT14I	CCWWGG	2 cut(s)	1265, 1311
EcoT22I	ATGCAT	2 cut(s)	259, 522
EcoT38I	GRGCYC	1 cut(s)	744
ErhI	CCWWGG	2 cut(s)	1265, 1311
FaeI	CATG	8 cut(s)	524, 568, 720, 1151, 1269, 1315, 1595, 2168
FalI	AAGNNNNNCTT	4 cut(s)	827, 859, 1602, 1634
FaqI	GGGAC	3 cut(s)	62, 1601, 1750
FatI	CATG	8 cut(s)	520, 564, 716, 1147, 1265, 1311, 1591, 2164
FauI	CCCGC	1 cut(s)	1537
FblI	GTMKAC	1 cut(s)	1048
Fnu4HI	GCNGC	4 cut(s)	125, 781, 784, 813
FokI	GGATG	3 cut(s)	1269, 1283, 1611
FriOI	GRGCYC	1 cut(s)	744
Fsp4HI	GCNGC	4 cut(s)	125, 781, 784, 813
FspBI	CTAG	7 cut(s)	704, 1001, 1193, 1362, 1541, 1700, 1710
GlaI	GCGC	1 cut(s)	1928
GluI	GCNGC	4 cut(s)	125, 781, 784, 813
GsuI	CTGGAG	3 cut(s)	557, 1440, 1886
HaeII	RGCGCY	1 cut(s)	1930
HaeIII	GGCC	9 cut(s)	626, 721, 742, 780, 831, 1087, 1095, 1320, 2062
HapII	CCGG	1 cut(s)	1440
HhaI	GCGC	1 cut(s)	1929
Hin1II	CATG	8 cut(s)	524, 568, 720, 1151, 1269, 1315, 1595, 2168
Hin6I	GCGC	1 cut(s)	1927
HinP1I	GCGC	1 cut(s)	1927
HincII	GTYRAC	2 cut(s)	295, 1174
HindII	GTYRAC	2 cut(s)	295, 1174
HindIII	AAGCTT	1 cut(s)	193
HinfI	GANTC	5 cut(s)	112, 326, 342, 1788, 2180
HpaI	GTTAAC	1 cut(s)	1174
HpaII	CCGG	1 cut(s)	1440
HphI	GGTGA	7 cut(s)	217, 252, 335, 653, 785, 1388, 1562
Hpy166II	GTNNAC	8 cut(s)	295, 358, 573, 900, 1049, 1174, 1644, 2104
Hpy188III	TCNNGA	8 cut(s)	794, 1440, 1457, 1533, 1772, 1865, 2030, 2177
Hpy8I	GTNNAC	8 cut(s)	295, 358, 573, 900, 1049, 1174, 1644, 2104
Hpy99I	CGWCG	1 cut(s)	1133
HpyCH4III	ACNGT	5 cut(s)	577, 971, 1183, 1814, 2101
HpyCH4IV	ACGT	2 cut(s)	1051, 1128
HpyF10VI	GCNNNNNNNGC	4 cut(s)	26, 526, 1416, 1775
HpySE526I	ACGT	2 cut(s)	1051, 1128
Hsp92II	CATG	8 cut(s)	524, 568, 720, 1151, 1269, 1315, 1595, 2168
HspAI	GCGC	1 cut(s)	1927
Kpn2I	TCCGGA	1 cut(s)	1439
KpnI	GGTACC	1 cut(s)	2159
KspAI	GTTAAC	1 cut(s)	1174
Kzo9I	GATC	9 cut(s)	460, 790, 886, 1403, 1529, 1552, 1702, 2005, 2036
LguI	GCTCTTC	2 cut(s)	962, 1417
LmnI	GCTCC	5 cut(s)	397, 445, 1468, 1502, 1867
Lsp1109I	GCAGC	2 cut(s)	111, 824
LweI	GCATC	3 cut(s)	32, 266, 1060
MaeI	CTAG	7 cut(s)	704, 1001, 1193, 1362, 1541, 1700, 1710
MaeII	ACGT	2 cut(s)	1051, 1128
MaeIII	GTNAC	2 cut(s)	642, 991
MalI	GATC	9 cut(s)	462, 792, 888, 1405, 1531, 1554, 1704, 2007, 2038
MboI	GATC	9 cut(s)	460, 790, 886, 1403, 1529, 1552, 1702, 2005, 2036
MflI	RGATCY	3 cut(s)	460, 790, 1702
MhlI	GDGCHC	1 cut(s)	744
MlsI	TGGCCA	2 cut(s)	721, 1320
MluNI	TGGCCA	2 cut(s)	721, 1320
MlyI	GAGTC	1 cut(s)	1782
MmeI	TCCRAC	3 cut(s)	315, 370, 2208
Mox20I	TGGCCA	2 cut(s)	721, 1320
Mph1103I	ATGCAT	2 cut(s)	259, 522
MroI	TCCGGA	1 cut(s)	1439
MroXI	GAANNNNTTC	2 cut(s)	1603, 1614
MscI	TGGCCA	2 cut(s)	721, 1320
MslI	CAYNNNNRTG	1 cut(s)	578
Msp20I	TGGCCA	2 cut(s)	721, 1320
MspA1I	CMGCKG	2 cut(s)	1349, 1937
MspCI	CTTAAG	1 cut(s)	1834
MspI	CCGG	1 cut(s)	1440
MspR9I	CCNGG	4 cut(s)	374, 536, 921, 1097
Mva1269I	GAATGC	1 cut(s)	640
MvaI	CCWGG	4 cut(s)	374, 536, 921, 1097
MvnI	CGCG	1 cut(s)	1133
MwoI	GCNNNNNNNGC	4 cut(s)	26, 526, 1416, 1775
NcoI	CCATGG	2 cut(s)	1265, 1311
NdeII	GATC	9 cut(s)	460, 790, 886, 1403, 1529, 1552, 1702, 2005, 2036
NheI	GCTAGC	1 cut(s)	1540
NlaIII	CATG	8 cut(s)	524, 568, 720, 1151, 1269, 1315, 1595, 2168
NlaIV	GGNNCC	4 cut(s)	742, 1207, 1589, 2157
NsiI	ATGCAT	2 cut(s)	259, 522
NspI	RCATGY	2 cut(s)	524, 568
OliI	CACNNNNGTG	1 cut(s)	578
PceI	AGGCCT	1 cut(s)	2062
PciSI	GCTCTTC	2 cut(s)	962, 1417
PctI	GAATGC	1 cut(s)	640
PdmI	GAANNNNTTC	2 cut(s)	1603, 1614
PfeI	GAWTC	4 cut(s)	112, 326, 342, 2180
PfoI	TCCNGGA	1 cut(s)	919
PkrI	GCNGC	4 cut(s)	126, 782, 785, 814
PleI	GAGTC	1 cut(s)	1782
PpsI	GAGTC	1 cut(s)	1782
Ppu21I	YACGTR	1 cut(s)	1052
Psp6I	CCWGG	4 cut(s)	372, 534, 919, 1095
PspGI	CCWGG	4 cut(s)	372, 534, 919, 1095
PspN4I	GGNNCC	4 cut(s)	742, 1207, 1589, 2157
PspOMI	GGGCCC	1 cut(s)	740
PspPI	GGNCC	5 cut(s)	495, 740, 741, 1093, 1588
PstI	CTGCAG	1 cut(s)	1996
PstNI	CAGNNNCTG	2 cut(s)	1096, 2078
PsuI	RGATCY	3 cut(s)	460, 790, 1702
PvuII	CAGCTG	2 cut(s)	1349, 1937
RsaI	GTAC	9 cut(s)	525, 824, 1033, 1189, 1614, 1645, 1726, 2046, 2157
RsaNI	GTAC	9 cut(s)	524, 823, 1032, 1188, 1613, 1644, 1725, 2045, 2156
RseI	CAYNNNNRTG	1 cut(s)	578
SapI	GCTCTTC	2 cut(s)	962, 1417
SatI	GCNGC	4 cut(s)	125, 781, 784, 813
Sau3AI	GATC	9 cut(s)	460, 790, 886, 1403, 1529, 1552, 1702, 2005, 2036
Sau96I	GGNCC	5 cut(s)	495, 740, 741, 1093, 1588
ScaI	AGTACT	2 cut(s)	1614, 2046
SchI	GAGTC	1 cut(s)	1782
ScrFI	CCNGG	4 cut(s)	374, 536, 921, 1097
SduI	GDGCHC	1 cut(s)	744
SfaNI	GCATC	3 cut(s)	32, 266, 1060
SfcI	CTRYAG	1 cut(s)	1992
SinI	GGWCC	2 cut(s)	495, 1588
SmiMI	CAYNNNNRTG	1 cut(s)	578
SmlI	CTYRAG	1 cut(s)	1834
SmoI	CTYRAG	1 cut(s)	1834
SseBI	AGGCCT	1 cut(s)	2062
SsiI	CCGC	7 cut(s)	781, 784, 932, 982, 1133, 1544, 1653
SspMI	CTAG	7 cut(s)	704, 1001, 1193, 1362, 1541, 1700, 1710
StuI	AGGCCT	1 cut(s)	2062
StyD4I	CCNGG	4 cut(s)	372, 534, 919, 1095
StyI	CCWWGG	2 cut(s)	1265, 1311
TaaI	ACNGT	5 cut(s)	577, 971, 1183, 1814, 2101
TaiI	ACGT	2 cut(s)	1054, 1131
TaqI	TCGA	2 cut(s)	942, 1532
TaqII	GACCGA	1 cut(s)	1964
TatI	WGTACW	6 cut(s)	523, 822, 1031, 1612, 1643, 2044
TauI	GCSGC	2 cut(s)	783, 786
TfiI	GAWTC	4 cut(s)	112, 326, 342, 2180
TscAI	CASTG	4 cut(s)	18, 580, 645, 1188
TseI	GCWGC	2 cut(s)	124, 812
TspDTI	ATGAA	9 cut(s)	59, 578, 705, 949, 1271, 1401, 1437, 1783, 2039
TspGWI	ACGGA	3 cut(s)	112, 1481, 1776
TspRI	CASTG	4 cut(s)	18, 580, 645, 1188
Vha464I	CTTAAG	1 cut(s)	1834
VpaK11BI	GGWCC	2 cut(s)	495, 1588
XapI	RAATTY	7 cut(s)	407, 599, 712, 1009, 1329, 1443, 2172
XceI	RCATGY	2 cut(s)	524, 568
XcmI	CCANNNNNNNNNTGG	1 cut(s)	423
XmiI	GTMKAC	1 cut(s)	1048
XmnI	GAANNNNTTC	2 cut(s)	1603, 1614
XspI	CTAG	7 cut(s)	704, 1001, 1193, 1362, 1541, 1700, 1710
ZrmI	AGTACT	2 cut(s)	1614, 2046
Zsp2I	ATGCAT	2 cut(s)	259, 522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.