Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0005199

Physical Location & Seq

Genomic Coordinates Reverse (-)

2478869 .. 2483033

Gene Structure 4165 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026372

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGAGAATATGCAGTATGCTGAGGAGCTTGTGAGGGAGTTTCTAGTGTTTAGGGGGTTCACTAGCACTTTGAAAGCTTTTGATTCCGAGTTGTCAACGGATATTGGCAACGGGTTTCAAGTGGAGAAGATAATGGAGTTGATTTTCTCGATGTATGTACCGAATTTTCAGGCAGAGAAGTTAGTTGGGTTGTTGAGTTTCTTCAAGCAATGTCTTTCTTCGTCTTCGGAGACTGTGCTTTTGGCTACTTTGTCGAAGATGGAGGTCTCTATTTTGCGGTACTATGTTGTCAATGCCATAAATGCAGGGAGGAGGGATAAGGTTTTGGAGTTCTTTGGTATGAAGGGGAATGATTTGTTGCAAAGGAGCCAGGATTGGACTCCATGGTTTGCCATTCCATATGTAAAGAAGCCAAGCTCTGATCCTGAGTTCCGTATATATTTCTCAAAGGAATGGTATGAGGCCTTGCGTTTATCTGTGAGGAATTTTTTTAGTGAGATCTTCAATGGTACTCATATCCTTTACTATACCTTGTTGAAAATTAGCTCAGAGAAGACTACTGTCAACCGTTTAAAAAGAGACATGAAGCAACTGAATCTCAAGTTGTCAGAACTTCAAGCTTTGTTGGAGGAAAAAGATGGTCAGTTATACCAGTTAAGAAGTAATGCTTCATCAGTAGTGGATGAAAGCACTGAACGAACCAAGAGCTCATCAAGTGTAGTGGCAGAGGAAAATCGTCTCACATCTAAAGATGCTGAGGAAACCGGCACTCTTGCTACTTTTCAAATTGGGGAAGCAGAGGGTGATCGAGATCAGGGTGCTGGATCCGTTGAAATTCAACCAGAATTAAAAATATCCCAGTCCAATAATGATTTGAATTATCCATCGAGTCCTCGTGTGGGAGTTGGTGGAACTGGTGATACCATTCAACTGTTCCAGGATAGTTCCGAGAATGAAAATGGCAGGGAAAGCCGTGTAGAAGATTTACCTGAAGTTGAAGTTGACTTTCAGGAGACATTTTTGGGCCACACAAGTCCAATCAGTTGCTGCCGGTTCTCTGCATCTGGAAACAATATAGCCAGTGCATCTGACGATGGTACAGTGAGGATATGGACATATGACTCATCAACTCCAGCATCCAGAAATGCAACCATTTATTGTGGAGCCAAGATTATGTCACTTGACTGGGAATGTAAATCTGACCGATTGCTTCTCATAGGCACTGCTGATAGAGGCATTAAAGCATGGAATGTCGATGCAAAGAGAGTTGTCTGTGATCTTCAGACAAGTGGACAATTTCCAAGTGTGTTGGATATAAAATGCAGCCCTGTGGAGCCAATTTTTGTTTCTGCTGCAGCATCCAAGGGGCATGGAACGAGTTATGTTGATAGTCTGGGTTTTGCTTCGTTAACTGTGTGGAACATGAGGACGTGGAAGGCTATGACAGTCCTTCCTCTTGGTAAAGATCCACCTGCAATTACATCTCTTAGTTTCAATCACAATGGGAAGATCTTAGCAGCCGCTGCAACTGATGGAATGATTCACATGTTTGATATGTCTGCGGGTCAACAAATAACTGGGTGGCCTGCACATGACTCTGCTATAAGCTCCATTCTTTTTGGGCCTGATGAGACTAGCATTTTCAGTTTGGGAGTGGATGGAAAGATTTTTGAATGGAGCTTGCAAAACCAAGGTCAAGTCCTTTGGTCGAGGAACTGTAGCAGGTTTTGTGGCCCTGAGAGCTCAAAAGATCGCAGACATGAAATGGCTTTGGATGCTAATGGGAGGAGACTGTTGGTAACTTCTGCTTCAGTAAGAGCACCCATTTATCAGGTTAGAGGTCATGCTACAAATGGGTTGAGAACTCTCCCACACAGTGCTGCCATAACTACTGTAGATTGGCACCCGACTTTGCCCCTTTTCTTGACAGGATCCGCTGATAACTCTGTCCGAGTAACATCTATATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0005829 GO:0006810 GO:0008150 GO:0010008 GO:0012505 GO:0016020 GO:0016192 GO:0016482 GO:0019207 GO:0019216 GO:0019220 GO:0019222 GO:0019898 GO:0030234 GO:0031090 GO:0031312 GO:0031313 GO:0031323 GO:0031410 GO:0031901 GO:0031902 GO:0031982 GO:0035014 GO:0042325 GO:0043226 GO:0043227 GO:0043229 GO:0043549 GO:0043550 GO:0043551 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045022 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051174 GO:0051179 GO:0051234 GO:0051338 GO:0051641 GO:0051649 GO:0065007 GO:0065009 GO:0080090 GO:0097708 GO:0098588 GO:0098772 GO:0098805 GO:0098927 GO:1903725

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

657

Amino Acids

72.74

Weight (kDa)

5.38

Isoelectric Point (pI)

39.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTLH_Armc9	PF23138	53 - 169	1.6e-18	Armc9, CTLH-like domain
WD40_CDC20-Fz	PF24807	326 - 436	2.3e-10	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	333 - 425	1.4e-08	TEP-1 second beta-propeller
WD40_Prp19	PF24814	336 - 519	9.4e-13	Prp19 WD40 domain
Beta-prop_EML	PF23409	337 - 561	7e-11	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_1st	PF25173	337 - 452	2.1e-08	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	337 - 430	8e-09	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	338 - 375	5e-07	WDR5 beta-propeller domain
WD40	PF00400	338 - 371	2.1e-10	WD domain, G-beta repeat
Beta-prop_Aladin	PF25460	341 - 564	7.7e-08	Aladin seven-bladed propeller
Beta-prop_THOC3	PF25174	343 - 562	8.7e-22	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	410 - 567	3.4e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd	PF25172	464 - 563	3.4e-07	WDR3 second beta-propeller domain
WD40_CDC20-Fz	PF24807	469 - 654	1.6e-12	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	469 - 565	6.4e-12	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	470 - 553	6.1e-07	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	470 - 652	8.1e-14	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	480 - 560	3.4e-06	WDR36/Utp21 first beta-propeller
ANAPC4_WD40	PF12894	485 - 540	3.6e-06	Anaphase-promoting complex subunit 4 WD40 domain
WD40_WDHD1_1st	PF24817	492 - 567	1e-10	WDHD1 first WD40 domain
Beta-prop_TEP1_2nd	PF25047	493 - 562	8.5e-06	TEP-1 second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005199)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700
malus_domestica	MD01G1212200.v1.1 MD07G1282600.v1.1
prunus_persica	Prupe.2G304700_v2.0.a1 Prupe.2G304700_v2.0.a1 Prupe.2G304700_v2.0.a1 Prupe.2G304700_v2.0.a1
pyrus_communis	pycom01g22250
rosa_chinensis	RchiOBHm_Chr1g0379661
rosa_laevigata	RLG00000026372
rosa_multiflora	Rmu_sc0013028.1_g000001
rosa_roxburghii	Rroxscaffold_4G00279980
rosa_rugosa	Rorug01G0413900 Rorug01G0414000.1 Rorug01G0414100.1 Rorug01G0414200.1
rosa_samantha	Rh1AG437700 Rh1BG393900 Rh1CG406800 Rh1DG424800
rosa_wichuraiana	Rw1G038140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1969
AarI	CACCTGC	1 cut(s)	1480
Acc36I	ACCTGC	2 cut(s)	1480, 1713
AccB1I	GGYRCC	1 cut(s)	1902
AciI	CCGC	4 cut(s)	277, 1521, 1562, 1935
AclWI	GGATC	6 cut(s)	416, 819, 832, 1460, 1926, 1939
AcsI	RAATTY	3 cut(s)	163, 484, 834
AcuI	CTGAAG	3 cut(s)	1011, 1265, 1794
AdeI	CACNNNGTG	1 cut(s)	1877
AfaI	GTAC	4 cut(s)	159, 281, 511, 1099
AfiI	CCNNNNNNNGG	1 cut(s)	899
AflIII	ACRYGT	1 cut(s)	1545
AjiI	CACGTC	1 cut(s)	1431
AjnI	CCWGG	2 cut(s)	369, 936
AjuI	GAANNNNNNNTTGG	2 cut(s)	1330, 1362
AluBI	AGCT	9 cut(s)	28, 77, 417, 546, 620, 708, 1608, 1680, 1743
AluI	AGCT	9 cut(s)	28, 77, 417, 546, 620, 708, 1608, 1680, 1743
Alw21I	GWGCWC	3 cut(s)	710, 1745, 1822
Alw26I	GTCTC	7 cut(s)	224, 271, 573, 743, 1007, 1625, 1783
AlwI	GGATC	6 cut(s)	416, 819, 832, 1460, 1926, 1939
AlwNI	CAGNNNCTG	2 cut(s)	1047, 1523
AoxI	GGCC	5 cut(s)	462, 1024, 1583, 1622, 1732
ApeKI	GCWGC	7 cut(s)	1047, 1323, 1352, 1355, 1517, 1523, 1880
ApoI	RAATTY	3 cut(s)	163, 484, 834
ArsI	GACNNNNNNTTYG	4 cut(s)	223, 255, 1678, 1710
AspS9I	GGNCC	3 cut(s)	1024, 1622, 1733
AsuHPI	GGTGA	2 cut(s)	815, 929
BamHI	GGATCC	2 cut(s)	824, 1931
BanI	GGYRCC	1 cut(s)	1902
BanII	GRGCYC	2 cut(s)	710, 1745
BauI	CACGAG	1 cut(s)	894
BbsI	GAAGAC	2 cut(s)	216, 560
Bbv12I	GWGCWC	3 cut(s)	710, 1745, 1822
BbvCI	CCTCAGC	2 cut(s)	21, 756
BbvI	GCAGC	7 cut(s)	1034, 1335, 1339, 1367, 1510, 1529, 1867
BccI	CCATC	6 cut(s)	253, 632, 892, 1088, 1526, 1652
BceAI	ACGGC	1 cut(s)	957
BciT130I	CCWGG	2 cut(s)	371, 938
BcoDI	GTCTC	7 cut(s)	224, 271, 573, 743, 1007, 1625, 1783
BfaI	CTAG	3 cut(s)	44, 63, 1635
BfmI	CTRYAG	3 cut(s)	1353, 1717, 1893
BfuAI	ACCTGC	2 cut(s)	1480, 1713
BglII	AGATCT	2 cut(s)	498, 1509
BisI	GCNGC	8 cut(s)	1048, 1324, 1353, 1356, 1518, 1521, 1524, 1881
BlsI	GCNGC	8 cut(s)	1049, 1325, 1354, 1357, 1519, 1522, 1525, 1882
Bme1390I	CCNGG	2 cut(s)	371, 938
BmgBI	CACGTC	1 cut(s)	1431
BmgT120I	GGNCC	3 cut(s)	1024, 1622, 1733
BmiI	GGNNCC	6 cut(s)	368, 826, 1165, 1335, 1904, 1933
BmrFI	CCNGG	2 cut(s)	371, 938
BmrI	ACTGGG	3 cut(s)	853, 1195, 1587
BmsI	GCATC	7 cut(s)	742, 1070, 1094, 1145, 1246, 1367, 1765
BmuI	ACTGGG	3 cut(s)	853, 1195, 1587
BoxI	GACNNNNGTC	1 cut(s)	560
BpiI	GAAGAC	2 cut(s)	216, 560
BpmI	CTGGAG	1 cut(s)	1116
Bpu10I	CCTNAGC	2 cut(s)	21, 756
BpuEI	CTTGAG	1 cut(s)	584
BsaBI	GATNNNNATC	1 cut(s)	810
BsaI	GGTCTC	1 cut(s)	271
BsaJI	CCNNGG	3 cut(s)	383, 1362, 1690
Bsc4I	CCNNNNNNNGG	1 cut(s)	899
Bse118I	RCCGGY	2 cut(s)	764, 1050
Bse1I	ACTGG	6 cut(s)	652, 859, 919, 1080, 1190, 1582
Bse3DI	GCAATG	1 cut(s)	215
Bse8I	GATNNNNATC	1 cut(s)	810
BseBI	CCWGG	2 cut(s)	371, 938
BseDI	CCNNGG	3 cut(s)	383, 1362, 1690
BseGI	GGATG	5 cut(s)	688, 1136, 1358, 1663, 1780
BseJI	GATNNNNATC	1 cut(s)	810
BseLI	CCNNNNNNNGG	1 cut(s)	899
BseMI	GCAATG	1 cut(s)	215
BseMII	CTCAG	5 cut(s)	12, 417, 561, 747, 1728
BseNI	ACTGG	6 cut(s)	652, 859, 919, 1080, 1190, 1582
BseRI	GAGGAG	3 cut(s)	38, 325, 1801
BseXI	GCAGC	7 cut(s)	1034, 1335, 1339, 1367, 1510, 1529, 1867
BsgI	GTGCAG	1 cut(s)	1572
BshFI	GGCC	5 cut(s)	464, 1026, 1585, 1624, 1734
BshNI	GGYRCC	1 cut(s)	1902
BsiHKAI	GWGCWC	3 cut(s)	710, 1745, 1822
BsiSI	CCGG	2 cut(s)	765, 1051
BslI	CCNNNNNNNGG	1 cut(s)	899
BsmAI	GTCTC	7 cut(s)	224, 271, 573, 743, 1007, 1625, 1783
BsmBI	CGTCTC	1 cut(s)	743
BsnI	GGCC	5 cut(s)	464, 1026, 1585, 1624, 1734
Bso31I	GGTCTC	1 cut(s)	271
Bsp1286I	GDGCHC	3 cut(s)	710, 1745, 1822
Bsp19I	CCATGG	1 cut(s)	383
BspACI	CCGC	4 cut(s)	277, 1521, 1562, 1935
BspANI	GGCC	5 cut(s)	464, 1026, 1585, 1624, 1734
BspCNI	CTCAG	5 cut(s)	13, 418, 560, 748, 1729
BspLI	GGNNCC	6 cut(s)	368, 826, 1165, 1335, 1904, 1933
BspMAI	CTGCAG	1 cut(s)	1357
BspMI	ACCTGC	2 cut(s)	1480, 1713
BspPI	GGATC	6 cut(s)	416, 819, 832, 1460, 1926, 1939
BspT107I	GGYRCC	1 cut(s)	1902
BspTNI	GGTCTC	1 cut(s)	271
BsrDI	GCAATG	1 cut(s)	215
BsrFI	RCCGGY	2 cut(s)	764, 1050
BsrI	ACTGG	6 cut(s)	652, 859, 919, 1080, 1190, 1582
BssAI	RCCGGY	2 cut(s)	764, 1050
BssECI	CCNNGG	3 cut(s)	383, 1362, 1690
BssSI	CACGAG	1 cut(s)	894
BssT1I	CCWWGG	3 cut(s)	383, 1362, 1690
Bst2BI	CACGAG	1 cut(s)	894
Bst2UI	CCWGG	2 cut(s)	371, 938
BstAPI	GCANNNNNTGC	1 cut(s)	1523
BstC8I	GCNNGC	2 cut(s)	1587, 1682
BstDEI	CTNAG	7 cut(s)	21, 426, 547, 756, 1487, 1513, 1737
BstDSI	CCRYGG	1 cut(s)	383
BstF5I	GGATG	5 cut(s)	688, 1136, 1358, 1663, 1780
BstMAI	GTCTC	7 cut(s)	224, 271, 573, 743, 1007, 1625, 1783
BstMWI	GCNNNNNNNGC	5 cut(s)	302, 969, 1523, 1740, 1775
BstNI	CCWGG	2 cut(s)	371, 938
BstNSI	RCATGY	1 cut(s)	1549
BstPAI	GACNNNNGTC	1 cut(s)	560
BstSCI	CCNGG	2 cut(s)	369, 936
BstSFI	CTRYAG	3 cut(s)	1353, 1717, 1893
BstV1I	GCAGC	7 cut(s)	1034, 1335, 1339, 1367, 1510, 1529, 1867
BstV2I	GAAGAC	2 cut(s)	216, 560
BstX2I	RGATCY	5 cut(s)	498, 824, 1465, 1509, 1931
BstYI	RGATCY	5 cut(s)	498, 824, 1465, 1509, 1931
BsuRI	GGCC	5 cut(s)	464, 1026, 1585, 1624, 1734
BtgI	CCRYGG	1 cut(s)	383
BtrI	CACGTC	1 cut(s)	1431
BtsCI	GGATG	5 cut(s)	688, 1136, 1358, 1663, 1780
BtsI	GCAGTG	1 cut(s)	1221
BtsIMutI	CAGTG	5 cut(s)	690, 1087, 1107, 1221, 1882
BveI	ACCTGC	2 cut(s)	1480, 1713
Cac8I	GCNNGC	2 cut(s)	1587, 1682
CaiI	CAGNNNCTG	2 cut(s)	1047, 1523
Cfr10I	RCCGGY	2 cut(s)	764, 1050
Cfr13I	GGNCC	3 cut(s)	1024, 1622, 1733
Csp6I	GTAC	4 cut(s)	158, 280, 510, 1098
CspCI	CAANNNNNGTGG	2 cut(s)	702, 737
CviAII	CATG	9 cut(s)	384, 583, 1245, 1370, 1423, 1546, 1592, 1760, 1844
CviQI	GTAC	4 cut(s)	158, 280, 510, 1098
DdeI	CTNAG	7 cut(s)	21, 426, 547, 756, 1487, 1513, 1737
DraI	TTTAAA	1 cut(s)	573
DraIII	CACNNNGTG	1 cut(s)	1877
Ecl136II	GAGCTC	2 cut(s)	708, 1743
Eco130I	CCWWGG	3 cut(s)	383, 1362, 1690
Eco147I	AGGCCT	1 cut(s)	464
Eco24I	GRGCYC	2 cut(s)	710, 1745
Eco31I	GGTCTC	1 cut(s)	271
Eco53kI	GAGCTC	2 cut(s)	708, 1743
Eco57I	CTGAAG	3 cut(s)	1011, 1265, 1794
EcoICRI	GAGCTC	2 cut(s)	708, 1743
EcoRII	CCWGG	2 cut(s)	369, 936
EcoT14I	CCWWGG	3 cut(s)	383, 1362, 1690
EcoT38I	GRGCYC	2 cut(s)	710, 1745
ErhI	CCWWGG	3 cut(s)	383, 1362, 1690
Esp3I	CGTCTC	1 cut(s)	743
FaeI	CATG	9 cut(s)	387, 586, 1248, 1373, 1426, 1549, 1595, 1763, 1847
FalI	AAGNNNNNCTT	2 cut(s)	652, 684
FatI	CATG	9 cut(s)	383, 582, 1244, 1369, 1422, 1545, 1591, 1759, 1843
FauI	CCCGC	1 cut(s)	1555
FauNDI	CATATG	2 cut(s)	400, 1117
Fnu4HI	GCNGC	8 cut(s)	1048, 1324, 1353, 1356, 1518, 1521, 1524, 1881
FokI	GGATG	5 cut(s)	695, 1123, 1345, 1670, 1787
FriOI	GRGCYC	2 cut(s)	710, 1745
Fsp4HI	GCNGC	8 cut(s)	1048, 1324, 1353, 1356, 1518, 1521, 1524, 1881
FspBI	CTAG	3 cut(s)	44, 63, 1635
GluI	GCNGC	8 cut(s)	1048, 1324, 1353, 1356, 1518, 1521, 1524, 1881
GsuI	CTGGAG	1 cut(s)	1116
HaeIII	GGCC	5 cut(s)	464, 1026, 1585, 1624, 1734
HapII	CCGG	2 cut(s)	765, 1051
Hin1II	CATG	9 cut(s)	387, 586, 1248, 1373, 1426, 1549, 1595, 1763, 1847
HincII	GTYRAC	5 cut(s)	96, 565, 1003, 1410, 1568
HindII	GTYRAC	5 cut(s)	96, 565, 1003, 1410, 1568
HindIII	AAGCTT	2 cut(s)	75, 618
HinfI	GANTC	7 cut(s)	83, 379, 595, 889, 1121, 1540, 1595
HpaI	GTTAAC	1 cut(s)	1410
HpaII	CCGG	2 cut(s)	765, 1051
HphI	GGTGA	2 cut(s)	815, 929
Hpy166II	GTNNAC	7 cut(s)	60, 96, 565, 1003, 1292, 1410, 1568
Hpy188III	TCNNGA	7 cut(s)	148, 425, 809, 1010, 1065, 1140, 1924
Hpy8I	GTNNAC	7 cut(s)	60, 96, 565, 1003, 1292, 1410, 1568
HpyAV	CCTTC	3 cut(s)	337, 1429, 1460
HpyCH4IV	ACGT	1 cut(s)	1430
HpyF10VI	GCNNNNNNNGC	5 cut(s)	302, 969, 1523, 1740, 1775
HpyF3I	CTNAG	7 cut(s)	21, 426, 547, 756, 1487, 1513, 1737
HpySE526I	ACGT	1 cut(s)	1430
Hsp92II	CATG	9 cut(s)	387, 586, 1248, 1373, 1426, 1549, 1595, 1763, 1847
KspAI	GTTAAC	1 cut(s)	1410
LmnI	GCTCC	6 cut(s)	25, 366, 1163, 1333, 1613, 1677
Lsp1109I	GCAGC	7 cut(s)	1034, 1335, 1339, 1367, 1510, 1529, 1867
LweI	GCATC	7 cut(s)	742, 1070, 1094, 1145, 1246, 1367, 1765
MaeI	CTAG	3 cut(s)	44, 63, 1635
MaeII	ACGT	1 cut(s)	1430
MaeIII	GTNAC	3 cut(s)	1176, 1798, 1954
MflI	RGATCY	5 cut(s)	498, 824, 1465, 1509, 1931
MhlI	GDGCHC	3 cut(s)	710, 1745, 1822
MlyI	GAGTC	4 cut(s)	373, 898, 1115, 1589
MmeI	TCCRAC	2 cut(s)	606, 1290
MseI	TTAA	5 cut(s)	572, 656, 848, 1239, 1409
MspA1I	CMGCKG	2 cut(s)	1523, 1937
MspI	CCGG	2 cut(s)	765, 1051
MspR9I	CCNGG	2 cut(s)	371, 938
MvaI	CCWGG	2 cut(s)	371, 938
MwoI	GCNNNNNNNGC	5 cut(s)	302, 969, 1523, 1740, 1775
NcoI	CCATGG	1 cut(s)	383
NdeI	CATATG	2 cut(s)	400, 1117
NlaIII	CATG	9 cut(s)	387, 586, 1248, 1373, 1426, 1549, 1595, 1763, 1847
NlaIV	GGNNCC	6 cut(s)	368, 826, 1165, 1335, 1904, 1933
NmuCI	GTSAC	1 cut(s)	1176
NspI	RCATGY	1 cut(s)	1549
PaqCI	CACCTGC	1 cut(s)	1480
PceI	AGGCCT	1 cut(s)	464
PciI	ACATGT	1 cut(s)	1545
PfeI	GAWTC	3 cut(s)	83, 595, 1540
PfoI	TCCNGGA	1 cut(s)	936
PkrI	GCNGC	8 cut(s)	1049, 1325, 1354, 1357, 1519, 1522, 1525, 1882
PleI	GAGTC	4 cut(s)	373, 897, 1115, 1589
PpsI	GAGTC	4 cut(s)	373, 897, 1115, 1589
PscI	ACATGT	1 cut(s)	1545
PshAI	GACNNNNGTC	1 cut(s)	560
PsiI	TTATAA	1 cut(s)	1969
Psp124BI	GAGCTC	2 cut(s)	710, 1745
Psp6I	CCWGG	2 cut(s)	369, 936
PspGI	CCWGG	2 cut(s)	369, 936
PspN4I	GGNNCC	6 cut(s)	368, 826, 1165, 1335, 1904, 1933
PspPI	GGNCC	3 cut(s)	1024, 1622, 1733
PsrI	GAACNNNNNNTAC	2 cut(s)	904, 936
PstI	CTGCAG	1 cut(s)	1357
PstNI	CAGNNNCTG	2 cut(s)	1047, 1523
PsuI	RGATCY	5 cut(s)	498, 824, 1465, 1509, 1931
RsaI	GTAC	4 cut(s)	159, 281, 511, 1099
RsaNI	GTAC	4 cut(s)	158, 280, 510, 1098
SacI	GAGCTC	2 cut(s)	710, 1745
SaqAI	TTAA	5 cut(s)	572, 656, 848, 1239, 1409
SatI	GCNGC	8 cut(s)	1048, 1324, 1353, 1356, 1518, 1521, 1524, 1881
Sau96I	GGNCC	3 cut(s)	1024, 1622, 1733
SchI	GAGTC	4 cut(s)	373, 898, 1115, 1589
ScrFI	CCNGG	2 cut(s)	371, 938
SduI	GDGCHC	3 cut(s)	710, 1745, 1822
SfaNI	GCATC	7 cut(s)	742, 1070, 1094, 1145, 1246, 1367, 1765
SfcI	CTRYAG	3 cut(s)	1353, 1717, 1893
SmlI	CTYRAG	1 cut(s)	599
SmoI	CTYRAG	1 cut(s)	599
SseBI	AGGCCT	1 cut(s)	464
SsiI	CCGC	4 cut(s)	277, 1521, 1562, 1935
SspMI	CTAG	3 cut(s)	44, 63, 1635
SstI	GAGCTC	2 cut(s)	710, 1745
StuI	AGGCCT	1 cut(s)	464
StyD4I	CCNGG	2 cut(s)	369, 936
StyI	CCWWGG	3 cut(s)	383, 1362, 1690
TaiI	ACGT	1 cut(s)	1433
TaqI	TCGA	6 cut(s)	149, 254, 808, 887, 1254, 1709
TaqII	GACCGA	1 cut(s)	1218
TauI	GCSGC	1 cut(s)	1523
TfiI	GAWTC	3 cut(s)	83, 595, 1540
Tru1I	TTAA	5 cut(s)	572, 656, 848, 1239, 1409
Tru9I	TTAA	5 cut(s)	572, 656, 848, 1239, 1409
TscAI	CASTG	5 cut(s)	697, 1087, 1107, 1228, 1882
TseFI	GTSAC	1 cut(s)	1176
TseI	GCWGC	7 cut(s)	1047, 1323, 1352, 1355, 1517, 1523, 1880
Tsp45I	GTSAC	1 cut(s)	1176
TspDTI	ATGAA	6 cut(s)	356, 599, 660, 699, 969, 1776
TspGWI	ACGGA	3 cut(s)	113, 422, 817
TspRI	CASTG	5 cut(s)	697, 1087, 1107, 1228, 1882
XapI	RAATTY	3 cut(s)	163, 484, 834
XceI	RCATGY	1 cut(s)	1549
XspI	CTAG	3 cut(s)	44, 63, 1635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.