Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0005199

Physical Location & Seq

Genomic Coordinates Forward (+)

63833211 .. 63836782

Gene Structure 3572 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG424800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGCCCTTAACTAAACCACGTATGCCAGCCTTGTTGAAAATTAGCTCAGAGAAGACTACTGTCAACCGTTTAAAAAGAGACATCAAGCAACTGAATCTCAAGTTGTCAGAACTTCAAGCTTTGTTGGAGGAAAAAGATGGTCAGATATACCAGTTAAGAAGTAACGCTTCATCAGTAGTGGATGAAAGCATCGAACGAACCAAGAGCTCATCAAGTGAAGTGCCCGAGGAAAATCGTCTTACATCTAAAGATGCTCAGGAAACTAGCCCTCTTGCTACTTTTCAAATCGGGGAAGCAGAGATTGGTCGAGACCAGGGTGCTGGATCCATTGGAATTCAACCAGAATTAAAAATATCCAAGTCCAATAATGATTTAAATTATTCATCGAGTCTTCGTGTGGGAGTTGGTGGAACTGGTGATACCATTCAACTGTTCCAGGATGGTTCCTATAATGAAAATGCCACGGAAAGCAGTGTAGAAGATTTTCCTGAAGTTGAAGTTGACTTTCAGGAGACATTTTTGGGCCACACAAGTCCGATCAGTTGCTGCCGGTTCTCTGCATCTGGAAACAATATAGCCAGTGCATCTGATGATGGTACAGTGAGGATATGGACATATGACTCATCAACTCCAGCATCCAGAAATGCAACCATTTATTGTGGAGCCAAAATTATGTCACTTGACTGGGAATGTAAATCTGACCGATTGCTTCTCATAGGCACTGCTGATAGAGGCATTAAAGCATGGAATGTCGATGCAAAGAGAGTTGTCTGTGATCTTCAGACAAGTGAAGAATTTCCAAGTGTGTTGGATATAAAATGCAGCCCTGTAGAGCCAATTTTTGTTTCTGCTGCAGCATCCAAGGGGCAGGGAACGAGTTATGTTGATTGTCTGGGTTTTGCTTCGTTAACTGTGTGGAACATGAGGACATGGAAGGCTATGACAGTCCTTCCTCTTGGTAAAGATCCACCTGCAATTACATCTCTTAGTTTCAATCACAATGGGAAGATCTTAGCAGCCGCTGCAACTGATGGAATGATTCACATGTTTGATATGTCTGCGGGTCAACAAATAACTGGGTGGCCTGCACATGACTCTGCTATAAGCTCCATTCTTTTTGGGCCTGATGAGACTAGCATTTTCAGTTTGGGAGTGGATGGAAAGATTTTTGAATGGAGCTTGCAAAACCAAGGTCAAGTCCTTTGGTCAAGGAATTGTAGCAGGTTCTGTGGCCCTGAGAGCTCAAAAGATCGCAGACATGAAATGGCTTTGGATGCTAATGGGGGGAGACTGTTGGTAACTTCTGCTTCAGTAAGAGCACCCATTTATCAGGTTAGAGGTCATGCTACAAATGGGTTGAGAACTCTCCCACATAGTGCTGCCATAACTACTGTAGATTGGCACCCGACATTGCCCATTTTCTTAACAGGATCTGCTGATAACTCTGTCCGAGTAACATCTATATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0005829 GO:0006810 GO:0008150 GO:0010008 GO:0012505 GO:0016020 GO:0016192 GO:0016482 GO:0019207 GO:0019216 GO:0019220 GO:0019222 GO:0019898 GO:0030234 GO:0031090 GO:0031312 GO:0031313 GO:0031323 GO:0031410 GO:0031901 GO:0031902 GO:0031982 GO:0035014 GO:0042325 GO:0043226 GO:0043227 GO:0043229 GO:0043549 GO:0043550 GO:0043551 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045022 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051174 GO:0051179 GO:0051234 GO:0051338 GO:0051641 GO:0051649 GO:0065007 GO:0065009 GO:0080090 GO:0097708 GO:0098588 GO:0098772 GO:0098805 GO:0098927 GO:1903725

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

489

Amino Acids

53.08

Weight (kDa)

5.34

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_1st	PF25173	158 - 285	6.9e-09	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	161 - 265	8e-10	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	166 - 257	1.4e-08	TEP-1 second beta-propeller
WD40_Gbeta	PF25391	167 - 253	7.6e-06	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	169 - 265	2.9e-09	WDHD1 first WD40 domain
Beta-prop_EML	PF23409	170 - 395	1.3e-11	Echinoderm microtubule-associated protein first beta-propeller
WD40	PF00400	171 - 204	1.5e-10	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	171 - 208	2.5e-07	WDR5 beta-propeller domain
Beta-prop_Aladin	PF25460	174 - 397	7.2e-08	Aladin seven-bladed propeller
Beta-prop_THOC3	PF25174	176 - 396	4.2e-22	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	242 - 400	7.9e-08	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd	PF25172	301 - 396	3.8e-07	WDR3 second beta-propeller domain
WD40_CDC20-Fz	PF24807	302 - 486	1.1e-12	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	302 - 398	3.7e-12	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	303 - 485	3.7e-14	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	313 - 393	2.2e-06	WDR36/Utp21 first beta-propeller
ANAPC4_WD40	PF12894	318 - 373	2.3e-06	Anaphase-promoting complex subunit 4 WD40 domain
WD40_WDHD1_1st	PF24817	325 - 400	6.8e-11	WDHD1 first WD40 domain
Beta-prop_TEP1_2nd	PF25047	326 - 395	5.9e-06	TEP-1 second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005199)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700 FvH4_7g30700
malus_domestica	MD01G1212200.v1.1 MD07G1282600.v1.1
prunus_persica	Prupe.2G304700_v2.0.a1 Prupe.2G304700_v2.0.a1 Prupe.2G304700_v2.0.a1 Prupe.2G304700_v2.0.a1
pyrus_communis	pycom01g22250
rosa_chinensis	RchiOBHm_Chr1g0379661
rosa_laevigata	RLG00000026372
rosa_multiflora	Rmu_sc0013028.1_g000001
rosa_roxburghii	Rroxscaffold_4G00279980
rosa_rugosa	Rorug01G0413900 Rorug01G0414000.1 Rorug01G0414100.1 Rorug01G0414200.1
rosa_samantha	Rh1AG437700 Rh1BG393900 Rh1CG406800 Rh1DG424800
rosa_wichuraiana	Rw1G038140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1468
AarI	CACCTGC	1 cut(s)	979
Acc36I	ACCTGC	2 cut(s)	979, 1212
AccB1I	GGYRCC	1 cut(s)	1401
AciI	CCGC	2 cut(s)	1020, 1061
AclWI	GGATC	4 cut(s)	318, 331, 959, 1438
AcsI	RAATTY	2 cut(s)	333, 794
AcuI	CTGAAG	3 cut(s)	510, 764, 1293
AdeI	CACNNNGTG	1 cut(s)	1376
AfaI	GTAC	1 cut(s)	598
AflIII	ACRYGT	1 cut(s)	1044
AgsI	TTSAA	8 cut(s)	37, 116, 284, 338, 428, 497, 994, 1172
AjnI	CCWGG	2 cut(s)	312, 435
AjuI	GAANNNNNNNTTGG	4 cut(s)	285, 317, 829, 861
AluBI	AGCT	6 cut(s)	45, 119, 207, 1107, 1179, 1242
AluI	AGCT	6 cut(s)	45, 119, 207, 1107, 1179, 1242
Alw21I	GWGCWC	3 cut(s)	209, 1244, 1321
Alw26I	GTCTC	5 cut(s)	72, 303, 506, 1124, 1282
AlwI	GGATC	4 cut(s)	318, 331, 959, 1438
AlwNI	CAGNNNCTG	4 cut(s)	546, 1022, 1227, 1433
Ama87I	CYCGRG	1 cut(s)	224
AoxI	GGCC	4 cut(s)	523, 1082, 1121, 1231
ApeKI	GCWGC	7 cut(s)	546, 822, 851, 854, 1016, 1022, 1379
ApoI	RAATTY	2 cut(s)	333, 794
ArsI	GACNNNNNNTTYG	2 cut(s)	1177, 1209
Asp700I	GAANNNNTTC	2 cut(s)	483, 795
AspS9I	GGNCC	3 cut(s)	523, 1121, 1232
AsuHPI	GGTGA	1 cut(s)	428
AvaI	CYCGRG	1 cut(s)	224
BaeGI	GKGCMC	1 cut(s)	225
BamHI	GGATCC	1 cut(s)	323
BanI	GGYRCC	1 cut(s)	1401
BanII	GRGCYC	2 cut(s)	209, 1244
BbsI	GAAGAC	2 cut(s)	59, 383
Bbv12I	GWGCWC	3 cut(s)	209, 1244, 1321
BbvI	GCAGC	7 cut(s)	533, 834, 838, 866, 1009, 1028, 1366
BccI	CCATC	5 cut(s)	131, 434, 587, 1025, 1151
BciT130I	CCWGG	2 cut(s)	314, 437
BcoDI	GTCTC	5 cut(s)	72, 303, 506, 1124, 1282
BfaI	CTAG	2 cut(s)	264, 1134
BfmI	CTRYAG	3 cut(s)	828, 852, 1392
BfuAI	ACCTGC	2 cut(s)	979, 1212
BglII	AGATCT	1 cut(s)	1008
BisI	GCNGC	8 cut(s)	547, 823, 852, 855, 1017, 1020, 1023, 1380
BlsI	GCNGC	8 cut(s)	548, 824, 853, 856, 1018, 1021, 1024, 1381
Bme1390I	CCNGG	2 cut(s)	314, 437
BmeT110I	CYCGRG	1 cut(s)	224
BmgT120I	GGNCC	3 cut(s)	523, 1121, 1232
BmiI	GGNNCC	4 cut(s)	325, 445, 664, 1403
BmrFI	CCNGG	2 cut(s)	314, 437
BmrI	ACTGGG	2 cut(s)	694, 1086
BmsI	GCATC	8 cut(s)	198, 241, 569, 593, 644, 745, 866, 1264
BmuI	ACTGGG	2 cut(s)	694, 1086
BoxI	GACNNNNGTC	1 cut(s)	59
BpiI	GAAGAC	2 cut(s)	59, 383
BpmI	CTGGAG	1 cut(s)	615
Bpu10I	CCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	83
BsaAI	YACGTR	1 cut(s)	20
BsaI	GGTCTC	1 cut(s)	303
BsaJI	CCNNGG	5 cut(s)	225, 313, 462, 861, 1189
Bse118I	RCCGGY	1 cut(s)	549
Bse1I	ACTGG	5 cut(s)	151, 418, 579, 689, 1081
Bse3DI	GCAATG	1 cut(s)	1409
BseBI	CCWGG	2 cut(s)	314, 437
BseDI	CCNNGG	5 cut(s)	225, 313, 462, 861, 1189
BseGI	GGATG	6 cut(s)	187, 445, 635, 857, 1162, 1279
BseMI	GCAATG	1 cut(s)	1409
BseMII	CTCAG	3 cut(s)	60, 269, 1227
BseNI	ACTGG	5 cut(s)	151, 418, 579, 689, 1081
BseSI	GKGCMC	1 cut(s)	225
BseXI	GCAGC	7 cut(s)	533, 834, 838, 866, 1009, 1028, 1366
BsgI	GTGCAG	1 cut(s)	1071
BshFI	GGCC	4 cut(s)	525, 1084, 1123, 1233
BshNI	GGYRCC	1 cut(s)	1401
BsiHKAI	GWGCWC	3 cut(s)	209, 1244, 1321
BsiHKCI	CYCGRG	1 cut(s)	224
BsiSI	CCGG	1 cut(s)	550
BsmAI	GTCTC	5 cut(s)	72, 303, 506, 1124, 1282
BsnI	GGCC	4 cut(s)	525, 1084, 1123, 1233
Bso31I	GGTCTC	1 cut(s)	303
BsoBI	CYCGRG	1 cut(s)	224
Bsp1286I	GDGCHC	4 cut(s)	209, 225, 1244, 1321
Bsp143I	GATC	7 cut(s)	323, 537, 775, 964, 1008, 1249, 1430
BspACI	CCGC	2 cut(s)	1020, 1061
BspANI	GGCC	4 cut(s)	525, 1084, 1123, 1233
BspCNI	CTCAG	3 cut(s)	59, 268, 1228
BspLI	GGNNCC	4 cut(s)	325, 445, 664, 1403
BspMAI	CTGCAG	1 cut(s)	856
BspMI	ACCTGC	2 cut(s)	979, 1212
BspPI	GGATC	4 cut(s)	318, 331, 959, 1438
BspT107I	GGYRCC	1 cut(s)	1401
BspTNI	GGTCTC	1 cut(s)	303
BsrDI	GCAATG	1 cut(s)	1409
BsrFI	RCCGGY	1 cut(s)	549
BsrI	ACTGG	5 cut(s)	151, 418, 579, 689, 1081
BssAI	RCCGGY	1 cut(s)	549
BssECI	CCNNGG	5 cut(s)	225, 313, 462, 861, 1189
BssMI	GATC	7 cut(s)	323, 537, 775, 964, 1008, 1249, 1430
BssT1I	CCWWGG	2 cut(s)	861, 1189
Bst2UI	CCWGG	2 cut(s)	314, 437
Bst4CI	ACNGT	8 cut(s)	61, 68, 432, 601, 913, 946, 1293, 1393
BstAPI	GCANNNNNTGC	1 cut(s)	1022
BstBAI	YACGTR	1 cut(s)	20
BstC8I	GCNNGC	3 cut(s)	27, 1086, 1181
BstDEI	CTNAG	5 cut(s)	46, 255, 986, 1012, 1236
BstDSI	CCRYGG	1 cut(s)	462
BstF5I	GGATG	6 cut(s)	187, 445, 635, 857, 1162, 1279
BstKTI	GATC	7 cut(s)	326, 540, 778, 967, 1011, 1252, 1433
BstMAI	GTCTC	5 cut(s)	72, 303, 506, 1124, 1282
BstMBI	GATC	7 cut(s)	323, 537, 775, 964, 1008, 1249, 1430
BstMWI	GCNNNNNNNGC	3 cut(s)	1022, 1239, 1274
BstNI	CCWGG	2 cut(s)	314, 437
BstNSI	RCATGY	1 cut(s)	1048
BstPAI	GACNNNNGTC	1 cut(s)	59
BstSCI	CCNGG	2 cut(s)	312, 435
BstSFI	CTRYAG	3 cut(s)	828, 852, 1392
BstSLI	GKGCMC	1 cut(s)	225
BstV1I	GCAGC	7 cut(s)	533, 834, 838, 866, 1009, 1028, 1366
BstV2I	GAAGAC	2 cut(s)	59, 383
BstX2I	RGATCY	4 cut(s)	323, 964, 1008, 1430
BstXI	CCANNNNNNTGG	1 cut(s)	320
BstYI	RGATCY	4 cut(s)	323, 964, 1008, 1430
BsuRI	GGCC	4 cut(s)	525, 1084, 1123, 1233
BtgI	CCRYGG	1 cut(s)	462
BtsCI	GGATG	6 cut(s)	187, 445, 635, 857, 1162, 1279
BtsI	GCAGTG	2 cut(s)	478, 720
BtsIMutI	CAGTG	4 cut(s)	478, 586, 606, 720
BveI	ACCTGC	2 cut(s)	979, 1212
Cac8I	GCNNGC	3 cut(s)	27, 1086, 1181
CaiI	CAGNNNCTG	4 cut(s)	546, 1022, 1227, 1433
Cfr10I	RCCGGY	1 cut(s)	549
Cfr13I	GGNCC	3 cut(s)	523, 1121, 1232
Csp6I	GTAC	1 cut(s)	597
CviAII	CATG	7 cut(s)	744, 922, 930, 1045, 1091, 1259, 1343
CviQI	GTAC	1 cut(s)	597
DdeI	CTNAG	5 cut(s)	46, 255, 986, 1012, 1236
DpnI	GATC	7 cut(s)	325, 539, 777, 966, 1010, 1251, 1432
DpnII	GATC	7 cut(s)	323, 537, 775, 964, 1008, 1249, 1430
DraI	TTTAAA	2 cut(s)	72, 375
DraIII	CACNNNGTG	1 cut(s)	1376
Ecl136II	GAGCTC	2 cut(s)	207, 1242
Eco130I	CCWWGG	2 cut(s)	861, 1189
Eco24I	GRGCYC	2 cut(s)	209, 1244
Eco31I	GGTCTC	1 cut(s)	303
Eco53kI	GAGCTC	2 cut(s)	207, 1242
Eco57I	CTGAAG	3 cut(s)	510, 764, 1293
Eco88I	CYCGRG	1 cut(s)	224
EcoICRI	GAGCTC	2 cut(s)	207, 1242
EcoRI	GAATTC	1 cut(s)	333
EcoRII	CCWGG	2 cut(s)	312, 435
EcoT14I	CCWWGG	2 cut(s)	861, 1189
EcoT38I	GRGCYC	2 cut(s)	209, 1244
ErhI	CCWWGG	2 cut(s)	861, 1189
FaeI	CATG	7 cut(s)	747, 925, 933, 1048, 1094, 1262, 1346
FalI	AAGNNNNNCTT	2 cut(s)	151, 183
FatI	CATG	7 cut(s)	743, 921, 929, 1044, 1090, 1258, 1342
FauI	CCCGC	1 cut(s)	1054
FauNDI	CATATG	1 cut(s)	616
Fnu4HI	GCNGC	8 cut(s)	547, 823, 852, 855, 1017, 1020, 1023, 1380
FokI	GGATG	6 cut(s)	194, 452, 622, 844, 1169, 1286
FriOI	GRGCYC	2 cut(s)	209, 1244
Fsp4HI	GCNGC	8 cut(s)	547, 823, 852, 855, 1017, 1020, 1023, 1380
FspBI	CTAG	2 cut(s)	264, 1134
GluI	GCNGC	8 cut(s)	547, 823, 852, 855, 1017, 1020, 1023, 1380
GsuI	CTGGAG	1 cut(s)	615
HaeIII	GGCC	4 cut(s)	525, 1084, 1123, 1233
HapII	CCGG	1 cut(s)	550
Hin1II	CATG	7 cut(s)	747, 925, 933, 1048, 1094, 1262, 1346
HincII	GTYRAC	4 cut(s)	64, 502, 909, 1067
HindII	GTYRAC	4 cut(s)	64, 502, 909, 1067
HindIII	AAGCTT	1 cut(s)	117
HinfI	GANTC	5 cut(s)	94, 388, 620, 1039, 1094
HpaI	GTTAAC	1 cut(s)	909
HpaII	CCGG	1 cut(s)	550
HphI	GGTGA	1 cut(s)	428
Hpy166II	GTNNAC	4 cut(s)	64, 502, 909, 1067
Hpy188I	TCNGA	8 cut(s)	49, 109, 144, 537, 589, 700, 783, 1451
Hpy188III	TCNNGA	6 cut(s)	257, 308, 488, 509, 564, 639
Hpy8I	GTNNAC	4 cut(s)	64, 502, 909, 1067
HpyAV	CCTTC	2 cut(s)	928, 959
HpyCH4III	ACNGT	8 cut(s)	61, 68, 432, 601, 913, 946, 1293, 1393
HpyCH4IV	ACGT	1 cut(s)	19
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1022, 1239, 1274
HpyF3I	CTNAG	5 cut(s)	46, 255, 986, 1012, 1236
HpySE526I	ACGT	1 cut(s)	19
Hsp92II	CATG	7 cut(s)	747, 925, 933, 1048, 1094, 1262, 1346
KspAI	GTTAAC	1 cut(s)	909
Kzo9I	GATC	7 cut(s)	323, 537, 775, 964, 1008, 1249, 1430
LmnI	GCTCC	3 cut(s)	662, 1112, 1176
Lsp1109I	GCAGC	7 cut(s)	533, 834, 838, 866, 1009, 1028, 1366
LweI	GCATC	8 cut(s)	198, 241, 569, 593, 644, 745, 866, 1264
MaeI	CTAG	2 cut(s)	264, 1134
MaeII	ACGT	1 cut(s)	19
MaeIII	GTNAC	4 cut(s)	161, 675, 1297, 1453
MalI	GATC	7 cut(s)	325, 539, 777, 966, 1010, 1251, 1432
MboI	GATC	7 cut(s)	323, 537, 775, 964, 1008, 1249, 1430
MboII	GAAGA	6 cut(s)	64, 383, 491, 770, 803, 1018
MflI	RGATCY	4 cut(s)	323, 964, 1008, 1430
MhlI	GDGCHC	4 cut(s)	209, 225, 1244, 1321
MluCI	AATT	9 cut(s)	39, 333, 344, 376, 669, 794, 837, 975, 1213
MlyI	GAGTC	3 cut(s)	397, 614, 1088
MmeI	TCCRAC	2 cut(s)	105, 789
MnlI	CCTC	8 cut(s)	121, 220, 279, 597, 725, 918, 963, 1331
MroXI	GAANNNNTTC	2 cut(s)	483, 795
MseI	TTAA	8 cut(s)	8, 71, 155, 347, 374, 738, 908, 1424
MspA1I	CMGCKG	1 cut(s)	1022
MspI	CCGG	1 cut(s)	550
MspR9I	CCNGG	2 cut(s)	314, 437
MvaI	CCWGG	2 cut(s)	314, 437
MwoI	GCNNNNNNNGC	3 cut(s)	1022, 1239, 1274
NdeI	CATATG	1 cut(s)	616
NdeII	GATC	7 cut(s)	323, 537, 775, 964, 1008, 1249, 1430
NlaIII	CATG	7 cut(s)	747, 925, 933, 1048, 1094, 1262, 1346
NlaIV	GGNNCC	4 cut(s)	325, 445, 664, 1403
NmuCI	GTSAC	1 cut(s)	675
NspI	RCATGY	1 cut(s)	1048
PaqCI	CACCTGC	1 cut(s)	979
PciI	ACATGT	1 cut(s)	1044
PdmI	GAANNNNTTC	2 cut(s)	483, 795
PfeI	GAWTC	2 cut(s)	94, 1039
PfoI	TCCNGGA	1 cut(s)	435
PkrI	GCNGC	8 cut(s)	548, 824, 853, 856, 1018, 1021, 1024, 1381
PleI	GAGTC	3 cut(s)	396, 614, 1088
PpsI	GAGTC	3 cut(s)	396, 614, 1088
Ppu21I	YACGTR	1 cut(s)	20
PscI	ACATGT	1 cut(s)	1044
PshAI	GACNNNNGTC	1 cut(s)	59
PsiI	TTATAA	1 cut(s)	1468
Psp124BI	GAGCTC	2 cut(s)	209, 1244
Psp6I	CCWGG	2 cut(s)	312, 435
PspGI	CCWGG	2 cut(s)	312, 435
PspN4I	GGNNCC	4 cut(s)	325, 445, 664, 1403
PspPI	GGNCC	3 cut(s)	523, 1121, 1232
PsrI	GAACNNNNNNTAC	2 cut(s)	403, 435
PstI	CTGCAG	1 cut(s)	856
PstNI	CAGNNNCTG	4 cut(s)	546, 1022, 1227, 1433
PsuI	RGATCY	4 cut(s)	323, 964, 1008, 1430
RsaI	GTAC	1 cut(s)	598
RsaNI	GTAC	1 cut(s)	597
SacI	GAGCTC	2 cut(s)	209, 1244
SaqAI	TTAA	8 cut(s)	8, 71, 155, 347, 374, 738, 908, 1424
SatI	GCNGC	8 cut(s)	547, 823, 852, 855, 1017, 1020, 1023, 1380
Sau3AI	GATC	7 cut(s)	323, 537, 775, 964, 1008, 1249, 1430
Sau96I	GGNCC	3 cut(s)	523, 1121, 1232
SchI	GAGTC	3 cut(s)	397, 614, 1088
ScrFI	CCNGG	2 cut(s)	314, 437
SduI	GDGCHC	4 cut(s)	209, 225, 1244, 1321
SfaNI	GCATC	8 cut(s)	198, 241, 569, 593, 644, 745, 866, 1264
SfcI	CTRYAG	3 cut(s)	828, 852, 1392
SmiI	ATTTAAAT	1 cut(s)	375
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
Sse9I	AATT	9 cut(s)	39, 333, 344, 376, 669, 794, 837, 975, 1213
SsiI	CCGC	2 cut(s)	1020, 1061
SspMI	CTAG	2 cut(s)	264, 1134
SstI	GAGCTC	2 cut(s)	209, 1244
StyD4I	CCNGG	2 cut(s)	312, 435
StyI	CCWWGG	2 cut(s)	861, 1189
SwaI	ATTTAAAT	1 cut(s)	375
TaaI	ACNGT	8 cut(s)	61, 68, 432, 601, 913, 946, 1293, 1393
TaiI	ACGT	1 cut(s)	22
TaqI	TCGA	4 cut(s)	192, 307, 386, 753
TaqII	GACCGA	1 cut(s)	717
TasI	AATT	9 cut(s)	39, 333, 344, 376, 669, 794, 837, 975, 1213
TauI	GCSGC	1 cut(s)	1022
TfiI	GAWTC	2 cut(s)	94, 1039
Tru1I	TTAA	8 cut(s)	8, 71, 155, 347, 374, 738, 908, 1424
Tru9I	TTAA	8 cut(s)	8, 71, 155, 347, 374, 738, 908, 1424
TscAI	CASTG	4 cut(s)	478, 586, 606, 727
TseFI	GTSAC	1 cut(s)	675
TseI	GCWGC	7 cut(s)	546, 822, 851, 854, 1016, 1022, 1379
Tsp45I	GTSAC	1 cut(s)	675
TspDTI	ATGAA	5 cut(s)	159, 198, 372, 468, 1275
TspGWI	ACGGA	1 cut(s)	479
TspRI	CASTG	4 cut(s)	478, 586, 606, 727
XapI	RAATTY	2 cut(s)	333, 794
XceI	RCATGY	1 cut(s)	1048
XmnI	GAANNNNTTC	2 cut(s)	483, 795
XspI	CTAG	2 cut(s)	264, 1134

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.