Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0008401

Physical Location & Seq

Genomic Coordinates Reverse (-)

12747236 .. 12752084

Gene Structure 4849 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027562

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGATTCGACTCGGTCCGAAATGCAAGAGCCGAGTATTGATACGGATAAGCTGAGCTACGAGATATTCTCGATTCTGGAGAGTAAGTTTTTGTTTGGATATGACGATCAGAAGCTGTGGGTGCCGAAGCAGATCTCTCCGCCGGCGACTGAGCCGAAAGCCGAGGCCCAGCCCGACCAGAATGCCGTGATCAAGAACCAGAGAGGCAAAATCTGCATACTCAGCATCGACGGAGGAGGCATGCGCGGGATTCTCTCCGGCAAGGCCCTGGCGTATCTCGAGAACGCGCTCAAGCTGAAATCGGGGAACCCCGACGCCAGAATCGCCGATTACTTCGACGTCTCCGCCGGCGCCGGCGTCGGGGGCATTTTCACCGCCATGCTCTTCGCCACCAGGGACCAGAGCCGGCCGATATTCAAGGCCGACGACACGTGGCGGTTCCTCGTTGATCAGGGGAAGAGGTTTTACAACAACCGCTCGTCGTCCTCCTCCGGCGGGTTCCTGCGGTGGTTCATTCGCGGCGGGTCGGGTTCCGGCTCCGGCTCCGGCTCGACCACGTCGGCCACGGCCGGGCTGGAGAAGGCGATGAGAGAGGCCTTCGCCGACAACAGCCGGAGCCTGACGCTGAGGGACACATTGAAGCCGGTTCTGATACCCTGCTACGACCTCTCCAGTACGGCGCCGTTTCTGTTCTCCCGGGCCGACGCGCTCGAGACCGAGAGCTACGACTTCCGCCTCTGGGAGGTCTGCCGCGCCACGTCAGCCGAGCCGGGGCTTTTCGAGCCGGTCCAAATGCGTTCCGTGAACAGCCAGACCAGTTGCCTGGCCGTGGACGGCGGCCTGGCCATGAGCAACCCGACCGCAGCGGCCATCACGCACGTGCTGCACAACAAGCAGGAGTTCCCGTTCGTGCGAGGCGTCGAGGACCTTTTGGTCCTTTCCATCGGGAGCGGGCAGTTTCTAGAAGCGAGCCACGAGTACGAGCAGGTCAAGAGGTGGAAGGCCAAGGAGTGGGCCCGCCCCATGGCCCGCATCTCCGGCGACGGCTCCGCTGACCTCGTTGACCAGTCCGTCGCCATGGCCTTCGGTCAGTCCGGCAGCACCAACTACGTCCGCATCCAGGCGAATGCGACAAGCTTGGGGAGGTGTGGTCCAAATGTAGATACAGACCCAAGTCCTAACAATGTCAAGATGCTGGTGGGATTAGCAGAGGATATGCTGAAGCAGAAGAATGTTGAATCGGTTCTGTTTGGCGGCAAGAGGATCGGCGAGCAGAGCAATTTCGAGAAGCTAGACTGCAAGCTGCTCCTAAAGCCACTTAGTCAGACTGCTACCACCAAACAATGCCAAAAGATAATAGAAGCTCATTACAAAGGAAGAAAAAGAAAGATGGAGAAGGAGAGAGTAAAAGAAAAGTATGTAAATCTTTGTGGGGATTTTTTTGCCCACCAAAGGACCATACATTGTGGGTCTTCACTCCACCTTTCAACAATGGCTATGAACCAATGTGGAGAAAAAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0005575 GO:0005623 GO:0005886 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009987 GO:0016020 GO:0016289 GO:0016298 GO:0016787 GO:0016788 GO:0016790 GO:0019374 GO:0019637 GO:0043207 GO:0044237 GO:0044238 GO:0044255 GO:0044464 GO:0047617 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:1901135 GO:1903509

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Patatin

Protein Analysis

508

Amino Acids

55.67

Weight (kDa)

8.53

Isoelectric Point (pI)

41.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Patatin	PF01734	74 - 291	2.7e-21	Patatin-like phospholipase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39220 AT3G54950
fragaria_vesca	FvH4_7g19660 FvH4_7g19660 FvH4_7g19660
malus_domestica	MD01G1108800.v1.1 MD07G1175100.v1.1
prunus_persica	Prupe.2G214300_v2.0.a1 Prupe.2G214300_v2.0.a1
pyrus_communis	pycom01g13590 pycom07g16950
rosa_chinensis	RchiOBHm_Chr1g0363481
rosa_laevigata	RLG00000027562
rosa_multiflora	Rmu_co7982616.1_g000001 Rmu_sc0008820.1_g000004
rosa_roxburghii	Rroxscaffold_4G00293130
rosa_rugosa	Rorug01G0307300 Rorug01G0307400
rosa_samantha	Rh1AG316500 Rh1BG279800 Rh1CG295900 Rh1DG311100
rosa_wichuraiana	Rw1G028040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	932, 1070
AatII	GACGTC	1 cut(s)	342
Acc36I	ACCTGC	1 cut(s)	976
AccB1I	GGYRCC	3 cut(s)	121, 350, 679
AccB7I	CCANNNNNTGG	1 cut(s)	1011
AccBSI	CCGCTC	2 cut(s)	477, 951
AccII	CGCG	5 cut(s)	246, 287, 519, 707, 753
AclWI	GGATC	1 cut(s)	1271
AcoI	YGGCCR	6 cut(s)	407, 561, 567, 825, 843, 867
AcuI	CTGAAG	1 cut(s)	1241
AcvI	CACGTG	2 cut(s)	432, 880
AcyI	GRCGYC	6 cut(s)	315, 339, 351, 357, 680, 918
AfaI	GTAC	2 cut(s)	676, 980
AflIII	ACRYGT	1 cut(s)	429
AgsI	TTSAA	4 cut(s)	418, 640, 1238, 1488
AjiI	CACGTC	2 cut(s)	558, 759
AjnI	CCWGG	5 cut(s)	267, 392, 822, 840, 1119
AleI	CACNNNNGTG	1 cut(s)	878
AloI	GAACNNNNNNTCC	2 cut(s)	890, 922
AluBI	AGCT	9 cut(s)	52, 57, 115, 295, 723, 1137, 1291, 1303, 1364
AluI	AGCT	9 cut(s)	52, 57, 115, 295, 723, 1137, 1291, 1303, 1364
Alw26I	GTCTC	2 cut(s)	346, 707
AlwI	GGATC	1 cut(s)	1271
AlwNI	CAGNNNCTG	1 cut(s)	115
Ama87I	CYCGRG	3 cut(s)	278, 696, 710
ApaI	GGGCCC	1 cut(s)	1018
ApeKI	GCWGC	4 cut(s)	863, 883, 1098, 1303
Asp700I	GAANNNNTTC	1 cut(s)	1242
AspLEI	GCGC	6 cut(s)	246, 289, 353, 682, 709, 755
AsuC2I	CCSGG	4 cut(s)	571, 697, 698, 771
AsuHPI	GGTGA	1 cut(s)	364
AvaI	CYCGRG	3 cut(s)	278, 696, 710
AvaII	GGWCC	7 cut(s)	15, 397, 787, 925, 934, 1151, 1455
BaeGI	GKGCMC	1 cut(s)	1018
BalI	TGGCCA	1 cut(s)	845
BanI	GGYRCC	3 cut(s)	121, 350, 679
BanII	GRGCYC	1 cut(s)	1018
BarI	GAAGNNNNNNTAC	2 cut(s)	449, 481
BauI	CACGAG	1 cut(s)	974
BbrPI	CACGTG	2 cut(s)	432, 880
BbsI	GAAGAC	1 cut(s)	1464
BbvCI	CCTCAGC	1 cut(s)	626
BbvI	GCAGC	4 cut(s)	870, 875, 1110, 1290
BccI	CCATC	3 cut(s)	878, 950, 1384
BceAI	ACGGC	7 cut(s)	170, 582, 667, 693, 812, 850, 1060
BcgI	CGANNNNNNTGC	4 cut(s)	164, 198, 1246, 1280
BciT130I	CCWGG	5 cut(s)	269, 394, 824, 842, 1121
BclI	TGATCA	2 cut(s)	189, 448
BcnI	CCSGG	4 cut(s)	571, 697, 698, 771
BcoDI	GTCTC	2 cut(s)	346, 707
BfaI	CTAG	2 cut(s)	962, 1292
BfoI	RGCGCY	2 cut(s)	354, 683
BfuAI	ACCTGC	1 cut(s)	976
BglII	AGATCT	1 cut(s)	132
BisI	GCNGC	9 cut(s)	520, 751, 838, 864, 867, 884, 1099, 1255, 1304
BlpI	GCTNAGC	1 cut(s)	53
BlsI	GCNGC	9 cut(s)	521, 752, 839, 865, 868, 885, 1100, 1256, 1305
Bme1390I	CCNGG	9 cut(s)	269, 394, 571, 697, 698, 771, 824, 842, 1121
Bme18I	GGWCC	7 cut(s)	15, 397, 787, 925, 934, 1151, 1455
BmeT110I	CYCGRG	3 cut(s)	278, 696, 710
BmgBI	CACGTC	2 cut(s)	558, 759
BmrFI	CCNGG	9 cut(s)	269, 394, 571, 697, 698, 771, 824, 842, 1121
BmsI	GCATC	4 cut(s)	234, 1041, 1125, 1182
BoxI	GACNNNNGTC	1 cut(s)	1173
BpiI	GAAGAC	1 cut(s)	1464
BplI	GAGNNNNNCTC	2 cut(s)	53, 85
BpmI	CTGGAG	3 cut(s)	98, 596, 655
Bpu10I	CCTNAGC	1 cut(s)	626
Bpu1102I	GCTNAGC	1 cut(s)	53
BpuEI	CTTGAG	1 cut(s)	275
BpuMI	CCSGG	4 cut(s)	571, 697, 698, 771
BsaAI	YACGTR	2 cut(s)	432, 880
BsaHI	GRCGYC	6 cut(s)	315, 339, 351, 357, 680, 918
BsaI	GGTCTC	1 cut(s)	707
BsaXI	ACNNNNNCTCC	8 cut(s)	71, 101, 653, 683, 890, 920, 1135, 1165
Bse118I	RCCGGY	6 cut(s)	142, 347, 353, 405, 643, 784
Bse1I	ACTGG	3 cut(s)	672, 816, 1066
BseBI	CCWGG	5 cut(s)	269, 394, 824, 842, 1121
BseGI	GGATG	1 cut(s)	1116
BseMII	CTCAG	4 cut(s)	44, 141, 235, 617
BseNI	ACTGG	3 cut(s)	672, 816, 1066
BseRI	GAGGAG	2 cut(s)	249, 478
BseSI	GKGCMC	1 cut(s)	1018
BseX3I	CGGCCG	2 cut(s)	407, 567
BseXI	GCAGC	4 cut(s)	870, 875, 1110, 1290
BseYI	CCCAGC	1 cut(s)	168
BsgI	GTGCAG	1 cut(s)	869
Bsh1236I	CGCG	5 cut(s)	246, 287, 519, 707, 753
Bsh1285I	CGRYCG	3 cut(s)	410, 570, 861
BshNI	GGYRCC	3 cut(s)	121, 350, 679
BsiEI	CGRYCG	3 cut(s)	410, 570, 861
BsiHKCI	CYCGRG	3 cut(s)	278, 696, 710
BslFI	GGGAC	2 cut(s)	410, 644
BsmAI	GTCTC	2 cut(s)	346, 707
BsmBI	CGTCTC	1 cut(s)	346
BsmFI	GGGAC	2 cut(s)	410, 644
BsmI	GAATGC	2 cut(s)	187, 1132
Bso31I	GGTCTC	1 cut(s)	707
BsoBI	CYCGRG	3 cut(s)	278, 696, 710
Bsp120I	GGGCCC	1 cut(s)	1014
Bsp1286I	GDGCHC	1 cut(s)	1018
Bsp143I	GATC	5 cut(s)	106, 132, 189, 448, 1263
Bsp1720I	GCTNAGC	1 cut(s)	53
Bsp19I	CCATGG	2 cut(s)	1023, 1077
BspCNI	CTCAG	4 cut(s)	45, 142, 234, 618
BspFNI	CGCG	5 cut(s)	246, 287, 519, 707, 753
BspMI	ACCTGC	1 cut(s)	976
BspPI	GGATC	1 cut(s)	1271
BspQI	GCTCTTC	1 cut(s)	389
BspT107I	GGYRCC	3 cut(s)	121, 350, 679
BspTNI	GGTCTC	1 cut(s)	707
BsrBI	CCGCTC	2 cut(s)	477, 951
BsrFI	RCCGGY	6 cut(s)	142, 347, 353, 405, 643, 784
BsrI	ACTGG	3 cut(s)	672, 816, 1066
BssAI	RCCGGY	6 cut(s)	142, 347, 353, 405, 643, 784
BssMI	GATC	5 cut(s)	106, 132, 189, 448, 1263
BssNI	GRCGYC	6 cut(s)	315, 339, 351, 357, 680, 918
BssSI	CACGAG	1 cut(s)	974
BssT1I	CCWWGG	3 cut(s)	1005, 1023, 1077
Bst2BI	CACGAG	1 cut(s)	974
Bst2UI	CCWGG	5 cut(s)	269, 394, 824, 842, 1121
Bst6I	CTCTTC	2 cut(s)	389, 452
BstACI	GRCGYC	6 cut(s)	315, 339, 351, 357, 680, 918
BstAPI	GCANNNNNTGC	2 cut(s)	213, 883
BstBAI	YACGTR	2 cut(s)	432, 880
BstDEI	CTNAG	5 cut(s)	53, 150, 221, 626, 1319
BstDSI	CCRYGG	4 cut(s)	564, 828, 1023, 1077
BstENI	CCTNNNNNAGG	1 cut(s)	740
BstF5I	GGATG	1 cut(s)	1116
BstFNI	CGCG	5 cut(s)	246, 287, 519, 707, 753
BstH2I	RGCGCY	2 cut(s)	354, 683
BstHHI	GCGC	6 cut(s)	246, 289, 353, 682, 709, 755
BstKTI	GATC	5 cut(s)	109, 135, 192, 451, 1266
BstMAI	GTCTC	2 cut(s)	346, 707
BstMBI	GATC	5 cut(s)	106, 132, 189, 448, 1263
BstMCI	CGRYCG	3 cut(s)	410, 570, 861
BstNI	CCWGG	5 cut(s)	269, 394, 824, 842, 1121
BstNSI	RCATGY	1 cut(s)	244
BstPAI	GACNNNNGTC	1 cut(s)	1173
BstSCI	CCNGG	9 cut(s)	267, 392, 569, 695, 696, 769, 822, 840, 1119
BstSLI	GKGCMC	1 cut(s)	1018
BstUI	CGCG	5 cut(s)	246, 287, 519, 707, 753
BstV1I	GCAGC	4 cut(s)	870, 875, 1110, 1290
BstV2I	GAAGAC	1 cut(s)	1464
BstX2I	RGATCY	1 cut(s)	132
BstXI	CCANNNNNNTGG	1 cut(s)	823
BstYI	RGATCY	1 cut(s)	132
BstZI	CGGCCG	2 cut(s)	407, 567
BtgI	CCRYGG	4 cut(s)	564, 828, 1023, 1077
BtgZI	GCGATG	1 cut(s)	599
BtrI	CACGTC	2 cut(s)	558, 759
BtsCI	GGATG	1 cut(s)	1116
BveI	ACCTGC	1 cut(s)	976
CaiI	CAGNNNCTG	1 cut(s)	115
CfoI	GCGC	6 cut(s)	246, 289, 353, 682, 709, 755
Cfr10I	RCCGGY	6 cut(s)	142, 347, 353, 405, 643, 784
Cfr9I	CCCGGG	1 cut(s)	696
CpoI	CGGWCCG	1 cut(s)	15
CseI	GACGC	5 cut(s)	323, 346, 631, 713, 907
Csp6I	GTAC	2 cut(s)	675, 979
CspI	CGGWCCG	1 cut(s)	15
CviAII	CATG	6 cut(s)	241, 379, 847, 1024, 1078, 1521
CviQI	GTAC	2 cut(s)	675, 979
DdeI	CTNAG	5 cut(s)	53, 150, 221, 626, 1319
DinI	GGCGCC	2 cut(s)	352, 681
DpnI	GATC	5 cut(s)	108, 134, 191, 450, 1265
DpnII	GATC	5 cut(s)	106, 132, 189, 448, 1263
DrdI	GACNNNNNNGTC	2 cut(s)	932, 1070
DseDI	GACNNNNNNGTC	2 cut(s)	932, 1070
EaeI	YGGCCR	6 cut(s)	407, 561, 567, 825, 843, 867
EagI	CGGCCG	2 cut(s)	407, 567
Eam1104I	CTCTTC	2 cut(s)	389, 452
EarI	CTCTTC	2 cut(s)	389, 452
EciI	GGCGGA	3 cut(s)	129, 334, 722
EclXI	CGGCCG	2 cut(s)	407, 567
Eco130I	CCWWGG	3 cut(s)	1005, 1023, 1077
Eco147I	AGGCCT	1 cut(s)	596
Eco24I	GRGCYC	1 cut(s)	1018
Eco31I	GGTCTC	1 cut(s)	707
Eco47I	GGWCC	7 cut(s)	15, 397, 787, 925, 934, 1151, 1455
Eco52I	CGGCCG	2 cut(s)	407, 567
Eco57I	CTGAAG	1 cut(s)	1241
Eco72I	CACGTG	2 cut(s)	432, 880
Eco88I	CYCGRG	3 cut(s)	278, 696, 710
EcoNI	CCTNNNNNAGG	1 cut(s)	740
EcoO109I	RGGNCCY	2 cut(s)	265, 925
EcoRII	CCWGG	5 cut(s)	267, 392, 822, 840, 1119
EcoT14I	CCWWGG	3 cut(s)	1005, 1023, 1077
EcoT38I	GRGCYC	1 cut(s)	1018
EgeI	GGCGCC	2 cut(s)	352, 681
EheI	GGCGCC	2 cut(s)	352, 681
ErhI	CCWWGG	3 cut(s)	1005, 1023, 1077
Esp3I	CGTCTC	1 cut(s)	346
FaeI	CATG	6 cut(s)	244, 382, 850, 1027, 1081, 1524
FaqI	GGGAC	2 cut(s)	410, 644
FatI	CATG	6 cut(s)	240, 378, 846, 1023, 1077, 1520
FauI	CCCGC	6 cut(s)	239, 488, 515, 944, 1025, 1037
FbaI	TGATCA	2 cut(s)	189, 448
Fnu4HI	GCNGC	9 cut(s)	520, 751, 838, 864, 867, 884, 1099, 1255, 1304
FokI	GGATG	1 cut(s)	1103
FriOI	GRGCYC	1 cut(s)	1018
Fsp4HI	GCNGC	9 cut(s)	520, 751, 838, 864, 867, 884, 1099, 1255, 1304
FspBI	CTAG	2 cut(s)	962, 1292
GlaI	GCGC	6 cut(s)	245, 288, 352, 681, 708, 754
GluI	GCNGC	9 cut(s)	520, 751, 838, 864, 867, 884, 1099, 1255, 1304
GsaI	CCCAGC	1 cut(s)	172
GsuI	CTGGAG	3 cut(s)	98, 596, 655
HaeII	RGCGCY	2 cut(s)	354, 683
HgaI	GACGC	5 cut(s)	323, 346, 631, 713, 907
HhaI	GCGC	6 cut(s)	246, 289, 353, 682, 709, 755
Hin1I	GRCGYC	6 cut(s)	315, 339, 351, 357, 680, 918
Hin1II	CATG	6 cut(s)	244, 382, 850, 1027, 1081, 1524
Hin6I	GCGC	6 cut(s)	244, 287, 351, 680, 707, 753
HinP1I	GCGC	6 cut(s)	244, 287, 351, 680, 707, 753
HincII	GTYRAC	1 cut(s)	1063
HindII	GTYRAC	1 cut(s)	1063
HindIII	AAGCTT	1 cut(s)	1135
HinfI	GANTC	6 cut(s)	5, 10, 73, 250, 321, 1238
HphI	GGTGA	1 cut(s)	364
Hpy166II	GTNNAC	3 cut(s)	805, 832, 1063
Hpy188I	TCNGA	4 cut(s)	19, 111, 651, 1326
Hpy8I	GTNNAC	3 cut(s)	805, 832, 1063
HpyAV	CCTTC	5 cut(s)	574, 607, 994, 1093, 1390
HpyCH4IV	ACGT	6 cut(s)	339, 431, 557, 758, 879, 1110
HpyCH4V	TGCA	4 cut(s)	25, 216, 886, 1299
HpyF3I	CTNAG	5 cut(s)	53, 150, 221, 626, 1319
HpySE526I	ACGT	6 cut(s)	339, 431, 557, 758, 879, 1110
Hsp92I	GRCGYC	6 cut(s)	315, 339, 351, 357, 680, 918
Hsp92II	CATG	6 cut(s)	244, 382, 850, 1027, 1081, 1524
HspAI	GCGC	6 cut(s)	244, 287, 351, 680, 707, 753
KasI	GGCGCC	2 cut(s)	350, 679
KroI	GCCGGC	4 cut(s)	142, 347, 353, 405
KroNI	GCCGGC	4 cut(s)	144, 349, 355, 407
Ksp22I	TGATCA	2 cut(s)	189, 448
Kzo9I	GATC	5 cut(s)	106, 132, 189, 448, 1263
LguI	GCTCTTC	1 cut(s)	389
LmnI	GCTCC	6 cut(s)	542, 548, 615, 948, 1052, 1311
Lsp1109I	GCAGC	4 cut(s)	870, 875, 1110, 1290
LweI	GCATC	4 cut(s)	234, 1041, 1125, 1182
MaeI	CTAG	2 cut(s)	962, 1292
MaeII	ACGT	6 cut(s)	339, 431, 557, 758, 879, 1110
MalI	GATC	5 cut(s)	108, 134, 191, 450, 1265
MbiI	CCGCTC	2 cut(s)	477, 951
MboI	GATC	5 cut(s)	106, 132, 189, 448, 1263
MboII	GAAGA	5 cut(s)	376, 469, 1240, 1389, 1464
MflI	RGATCY	1 cut(s)	132
MhlI	GDGCHC	1 cut(s)	1018
MlsI	TGGCCA	1 cut(s)	845
MluCI	AATT	1 cut(s)	1279
MluNI	TGGCCA	1 cut(s)	845
Mly113I	GGCGCC	2 cut(s)	351, 680
MlyI	GAGTC	1 cut(s)	4
Mox20I	TGGCCA	1 cut(s)	845
MreI	CGCCGGCG	3 cut(s)	142, 347, 353
MroNI	GCCGGC	4 cut(s)	142, 347, 353, 405
MroXI	GAANNNNTTC	1 cut(s)	1242
MscI	TGGCCA	1 cut(s)	845
MslI	CAYNNNNRTG	2 cut(s)	377, 878
Msp20I	TGGCCA	1 cut(s)	845
MspA1I	CMGCKG	2 cut(s)	866, 1052
MspR9I	CCNGG	9 cut(s)	269, 394, 571, 697, 698, 771, 824, 842, 1121
Mva1269I	GAATGC	2 cut(s)	187, 1132
MvaI	CCWGG	5 cut(s)	269, 394, 824, 842, 1121
MvnI	CGCG	5 cut(s)	246, 287, 519, 707, 753
NaeI	GCCGGC	4 cut(s)	144, 349, 355, 407
NarI	GGCGCC	2 cut(s)	351, 680
NciI	CCSGG	4 cut(s)	571, 697, 698, 771
NcoI	CCATGG	2 cut(s)	1023, 1077
NdeII	GATC	5 cut(s)	106, 132, 189, 448, 1263
NgoMIV	GCCGGC	4 cut(s)	142, 347, 353, 405
NlaIII	CATG	6 cut(s)	244, 382, 850, 1027, 1081, 1524
NmeAIII	GCCGAG	3 cut(s)	57, 187, 790
NspI	RCATGY	1 cut(s)	244
OliI	CACNNNNGTG	1 cut(s)	878
PaeI	GCATGC	1 cut(s)	244
PaeR7I	CTCGAG	2 cut(s)	278, 710
PceI	AGGCCT	1 cut(s)	596
PciSI	GCTCTTC	1 cut(s)	389
PcsI	WCGNNNNNNNCGW	1 cut(s)	915
PctI	GAATGC	2 cut(s)	187, 1132
PdiI	GCCGGC	4 cut(s)	144, 349, 355, 407
PdmI	GAANNNNTTC	1 cut(s)	1242
PfeI	GAWTC	5 cut(s)	5, 73, 250, 321, 1238
PflFI	GACNNNGTC	2 cut(s)	13, 556
PflMI	CCANNNNNTGG	1 cut(s)	1011
PkrI	GCNGC	9 cut(s)	521, 752, 839, 865, 868, 885, 1100, 1256, 1305
PleI	GAGTC	1 cut(s)	4
PluTI	GGCGCC	2 cut(s)	354, 683
PmaCI	CACGTG	2 cut(s)	432, 880
PmlI	CACGTG	2 cut(s)	432, 880
PpsI	GAGTC	1 cut(s)	4
Ppu21I	YACGTR	2 cut(s)	432, 880
PpuMI	RGGWCCY	1 cut(s)	925
PshAI	GACNNNNGTC	1 cut(s)	1173
Psp5II	RGGWCCY	1 cut(s)	925
Psp6I	CCWGG	5 cut(s)	267, 392, 822, 840, 1119
PspCI	CACGTG	2 cut(s)	432, 880
PspFI	CCCAGC	1 cut(s)	168
PspGI	CCWGG	5 cut(s)	267, 392, 822, 840, 1119
PspOMI	GGGCCC	1 cut(s)	1014
PspPPI	RGGWCCY	1 cut(s)	925
PstNI	CAGNNNCTG	1 cut(s)	115
PsuI	RGATCY	1 cut(s)	132
PsyI	GACNNNGTC	2 cut(s)	13, 556
RsaI	GTAC	2 cut(s)	676, 980
RsaNI	GTAC	2 cut(s)	675, 979
RseI	CAYNNNNRTG	2 cut(s)	377, 878
Rsr2I	CGGWCCG	1 cut(s)	15
RsrII	CGGWCCG	1 cut(s)	15
SapI	GCTCTTC	1 cut(s)	389
SatI	GCNGC	9 cut(s)	520, 751, 838, 864, 867, 884, 1099, 1255, 1304
Sau3AI	GATC	5 cut(s)	106, 132, 189, 448, 1263
SchI	GAGTC	1 cut(s)	4
ScrFI	CCNGG	9 cut(s)	269, 394, 571, 697, 698, 771, 824, 842, 1121
SduI	GDGCHC	1 cut(s)	1018
SfaNI	GCATC	4 cut(s)	234, 1041, 1125, 1182
SfoI	GGCGCC	2 cut(s)	352, 681
Sfr274I	CTCGAG	2 cut(s)	278, 710
SgrAI	CRCCGGYG	3 cut(s)	142, 347, 353
SinI	GGWCC	7 cut(s)	15, 397, 787, 925, 934, 1151, 1455
SlaI	CTCGAG	2 cut(s)	278, 710
SmaI	CCCGGG	1 cut(s)	698
SmiMI	CAYNNNNRTG	2 cut(s)	377, 878
SmlI	CTYRAG	3 cut(s)	278, 290, 710
SmoI	CTYRAG	3 cut(s)	278, 290, 710
SphI	GCATGC	1 cut(s)	244
Sse9I	AATT	1 cut(s)	1279
SseBI	AGGCCT	1 cut(s)	596
SspDI	GGCGCC	2 cut(s)	350, 679
SspMI	CTAG	2 cut(s)	962, 1292
StuI	AGGCCT	1 cut(s)	596
StyD4I	CCNGG	9 cut(s)	267, 392, 569, 695, 696, 769, 822, 840, 1119
StyI	CCWWGG	3 cut(s)	1005, 1023, 1077
TaiI	ACGT	6 cut(s)	342, 434, 560, 761, 882, 1113
TaqII	GACCGA	2 cut(s)	731, 1076
TasI	AATT	1 cut(s)	1279
TauI	GCSGC	5 cut(s)	522, 753, 840, 869, 1257
TfiI	GAWTC	5 cut(s)	5, 73, 250, 321, 1238
TseI	GCWGC	4 cut(s)	863, 883, 1098, 1303
TspDTI	ATGAA	2 cut(s)	502, 1514
TspGWI	ACGGA	4 cut(s)	59, 246, 790, 1060
TspMI	CCCGGG	1 cut(s)	696
Tth111I	GACNNNGTC	2 cut(s)	13, 556
Van91I	CCANNNNNTGG	1 cut(s)	1011
VpaK11BI	GGWCC	7 cut(s)	15, 397, 787, 925, 934, 1151, 1455
XagI	CCTNNNNNAGG	1 cut(s)	740
XbaI	TCTAGA	1 cut(s)	961
XceI	RCATGY	1 cut(s)	244
XcmI	CCANNNNNNNNNTGG	1 cut(s)	571
XhoI	CTCGAG	2 cut(s)	278, 710
XmaI	CCCGGG	1 cut(s)	696
XmnI	GAANNNNTTC	1 cut(s)	1242
XspI	CTAG	2 cut(s)	962, 1292
ZraI	GACGTC	1 cut(s)	340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.