Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0008401

Physical Location & Seq

Genomic Coordinates Forward (+)

55549202 .. 55554828

Gene Structure 5627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G028040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGATTCGACTCGGTCCGAAATGCAAGAGCCGAGTATTGATACCGATAAGCTGAGCTACGAGATATTCTCGATTCTGGAGAGTAAGTTTTTGTTTGGGTATGACGATCAGAAGCTGTGGGTGCCGAAGCAGATCTCTCCGCCGGCGACTGAGCCCAAAGCCGAGGCCCTGCCCGACCAGAATGCCGTCATCAAGAACCAGAGAGGCAAAATCTGCATACTCAGCATCGACGGCGGAGGCATGCGCGGGATTCTCTCCGGCAAGGCCCTGGCGTATCTCGAGAACGCGCTCAAGCTGAAATCGGGCAACCCCGACGCCAGAATCGCCGATTACTTCGACGTCTCCGCCGGCGCCGGCGTCGGGGGCATTTTCACCGCCATGCTCTTCGCCACCAGGGACCAGAGCCGGCCGATATTCAAGGCCGACGACACGTGGCGGTTCCTCGTTGATCAGGGGAAGAGGTTTTACAACAACCGCTCCTCCTCCTCCTCCTCTGGCGGGTTCCTGCGGTGGTTCATTCGCGGCGGGTCTGGCTCCGGCTCCGGCTCCTGCTCGACCACGTCGGCCACGGCCGGGCTGGAGAAGGCGATGAGAGAGGCCTTCGCCGACAGCAGCCGGAGCCTGACGCTGAGGGACACATTGAAGCCGGTTCTGATACCCTGCTACGACCTCTCCAGTACGGCGCCGTTTCTGTTCTCCCGGGCCGACGCGCTCGAGACCGAGAGCTACGACTTCCGCCTCTGGGAGGTCTGCCGCGCCACGTCAGCCGAGCCGGGGCTTTTCGAGCCGGTCCAAATGCGGTCCGTGAACAGCCAGACCAGTTGCCTGGCCGTGGACGGCGGCCTGGCCATGAGCAACCCGACCGCCGCGGCCATCACGCACGTGCTGCACAACAAGCAGGAGTTCCCGTTCGTGCGAGGGGTGGAGGACCTTTTGGTCCTTTCCATCGGGAGCGGGCAGTTTCTAGAAGCGAGCCACGAGTACGAGCAGGTCAAGAGGTGGAAGGCCAAGGAGTGGGCCCGCCCCATGGCCCGCATCTCCGGCGACGGCTCCGCTGACCTCGTTGACCAGTCCGTCGCCATGGCCTTCGGTCAGTCCGGCAGCACCAACTACGTCCGCATCCAGGCGAATGCGACAAGCTTGGGGAGGTGTGGTCCAAATGTAGATACAGACCCAAGTCCTAACAATGTCAAGATGCTGGTGGGATTAGCAGAGGATATGCTCAAGCAGAAGAATGTTGAATCGGTTCTGTTTGGCGGCAAGAGGATCGGCGAGCAGAGCAATTTCGAGAAGCTAGACTGGTTCGCCGGAGAACTTGTGCTGGAACATCAGAGGAGGAGTTGCAGAATAGCTCCCACTGTTGCCTTCAAGCAAGCTGCTCCTAAAGCCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0005575 GO:0005623 GO:0005886 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009987 GO:0016020 GO:0016289 GO:0016298 GO:0016787 GO:0016788 GO:0016790 GO:0019374 GO:0019637 GO:0043207 GO:0044237 GO:0044238 GO:0044255 GO:0044464 GO:0047617 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:1901135 GO:1903509

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Patatin

Protein Analysis

464

Amino Acids

50.62

Weight (kDa)

6.49

Isoelectric Point (pI)

46.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Patatin	PF01734	74 - 292	1.3e-21	Patatin-like phospholipase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39220 AT3G54950
fragaria_vesca	FvH4_7g19660 FvH4_7g19660 FvH4_7g19660
malus_domestica	MD01G1108800.v1.1 MD07G1175100.v1.1
prunus_persica	Prupe.2G214300_v2.0.a1 Prupe.2G214300_v2.0.a1
pyrus_communis	pycom01g13590 pycom07g16950
rosa_chinensis	RchiOBHm_Chr1g0363481
rosa_laevigata	RLG00000027562
rosa_multiflora	Rmu_co7982616.1_g000001 Rmu_sc0008820.1_g000004
rosa_roxburghii	Rroxscaffold_4G00293130
rosa_rugosa	Rorug01G0307300 Rorug01G0307400
rosa_samantha	Rh1AG316500 Rh1BG279800 Rh1CG295900 Rh1DG311100
rosa_wichuraiana	Rw1G028040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	935, 1073
AatII	GACGTC	1 cut(s)	342
Acc36I	ACCTGC	1 cut(s)	979
AccB1I	GGYRCC	3 cut(s)	121, 350, 682
AccB7I	CCANNNNNTGG	1 cut(s)	1014
AccBSI	CCGCTC	2 cut(s)	477, 954
AccII	CGCG	6 cut(s)	246, 287, 522, 710, 756, 869
AclWI	GGATC	1 cut(s)	1274
AcoI	YGGCCR	6 cut(s)	407, 564, 570, 828, 846, 870
AcvI	CACGTG	2 cut(s)	432, 883
AcyI	GRCGYC	5 cut(s)	315, 339, 351, 357, 683
AfaI	GTAC	2 cut(s)	679, 983
AflIII	ACRYGT	1 cut(s)	429
AgsI	TTSAA	4 cut(s)	418, 643, 1241, 1369
AjiI	CACGTC	2 cut(s)	561, 762
AjnI	CCWGG	5 cut(s)	267, 392, 825, 843, 1122
AleI	CACNNNNGTG	1 cut(s)	881
AloI	GAACNNNNNNTCC	2 cut(s)	893, 925
AluBI	AGCT	9 cut(s)	52, 57, 115, 295, 726, 1140, 1294, 1352, 1376
AluI	AGCT	9 cut(s)	52, 57, 115, 295, 726, 1140, 1294, 1352, 1376
Alw26I	GTCTC	2 cut(s)	346, 710
AlwI	GGATC	1 cut(s)	1274
AlwNI	CAGNNNCTG	1 cut(s)	115
Ama87I	CYCGRG	3 cut(s)	278, 699, 713
ApaI	GGGCCC	1 cut(s)	1021
ApeKI	GCWGC	4 cut(s)	612, 886, 1101, 1376
Asp700I	GAANNNNTTC	1 cut(s)	1245
AspLEI	GCGC	6 cut(s)	246, 289, 353, 685, 712, 758
AsuC2I	CCSGG	4 cut(s)	574, 700, 701, 774
AsuHPI	GGTGA	1 cut(s)	364
AvaI	CYCGRG	3 cut(s)	278, 699, 713
AvaII	GGWCC	7 cut(s)	15, 397, 790, 801, 928, 937, 1154
BaeGI	GKGCMC	1 cut(s)	1021
BalI	TGGCCA	1 cut(s)	848
BanI	GGYRCC	3 cut(s)	121, 350, 682
BanII	GRGCYC	2 cut(s)	156, 1021
BarI	GAAGNNNNNNTAC	2 cut(s)	449, 481
BauI	CACGAG	1 cut(s)	977
BbrPI	CACGTG	2 cut(s)	432, 883
BbvCI	CCTCAGC	1 cut(s)	629
BbvI	GCAGC	4 cut(s)	624, 873, 1113, 1363
BccI	CCATC	2 cut(s)	881, 953
BceAI	ACGGC	8 cut(s)	170, 247, 585, 670, 696, 815, 853, 1063
BcgI	CGANNNNNNTGC	4 cut(s)	164, 198, 1249, 1283
BciT130I	CCWGG	5 cut(s)	269, 394, 827, 845, 1124
BclI	TGATCA	1 cut(s)	448
BcnI	CCSGG	4 cut(s)	574, 700, 701, 774
BcoDI	GTCTC	2 cut(s)	346, 710
BfaI	CTAG	2 cut(s)	965, 1295
BfoI	RGCGCY	2 cut(s)	354, 686
BfuAI	ACCTGC	1 cut(s)	979
BglII	AGATCT	1 cut(s)	132
BlpI	GCTNAGC	1 cut(s)	53
Bme1390I	CCNGG	9 cut(s)	269, 394, 574, 700, 701, 774, 827, 845, 1124
Bme18I	GGWCC	7 cut(s)	15, 397, 790, 801, 928, 937, 1154
BmeT110I	CYCGRG	3 cut(s)	278, 699, 713
BmgBI	CACGTC	2 cut(s)	561, 762
BmrFI	CCNGG	9 cut(s)	269, 394, 574, 700, 701, 774, 827, 845, 1124
BmsI	GCATC	4 cut(s)	234, 1044, 1128, 1185
BoxI	GACNNNNGTC	1 cut(s)	1176
BplI	GAGNNNNNCTC	2 cut(s)	53, 85
BpmI	CTGGAG	3 cut(s)	98, 599, 658
Bpu10I	CCTNAGC	1 cut(s)	629
Bpu1102I	GCTNAGC	1 cut(s)	53
BpuEI	CTTGAG	2 cut(s)	275, 1208
BpuMI	CCSGG	4 cut(s)	574, 700, 701, 774
BsaAI	YACGTR	2 cut(s)	432, 883
BsaHI	GRCGYC	5 cut(s)	315, 339, 351, 357, 683
BsaI	GGTCTC	1 cut(s)	710
Bse118I	RCCGGY	6 cut(s)	142, 347, 353, 405, 646, 787
Bse1I	ACTGG	4 cut(s)	675, 819, 1069, 1304
BseBI	CCWGG	5 cut(s)	269, 394, 827, 845, 1124
BseGI	GGATG	1 cut(s)	1119
BseMII	CTCAG	4 cut(s)	44, 141, 235, 620
BseNI	ACTGG	4 cut(s)	675, 819, 1069, 1304
BseRI	GAGGAG	7 cut(s)	469, 472, 475, 478, 481, 1348, 1351
BseSI	GKGCMC	1 cut(s)	1021
BseX3I	CGGCCG	2 cut(s)	407, 570
BseXI	GCAGC	4 cut(s)	624, 873, 1113, 1363
BsgI	GTGCAG	1 cut(s)	872
Bsh1236I	CGCG	6 cut(s)	246, 287, 522, 710, 756, 869
Bsh1285I	CGRYCG	3 cut(s)	410, 573, 864
BshNI	GGYRCC	3 cut(s)	121, 350, 682
BsiEI	CGRYCG	3 cut(s)	410, 573, 864
BsiHKCI	CYCGRG	3 cut(s)	278, 699, 713
BslFI	GGGAC	2 cut(s)	410, 647
BsmAI	GTCTC	2 cut(s)	346, 710
BsmBI	CGTCTC	1 cut(s)	346
BsmFI	GGGAC	2 cut(s)	410, 647
BsmI	GAATGC	2 cut(s)	187, 1135
Bso31I	GGTCTC	1 cut(s)	710
BsoBI	CYCGRG	3 cut(s)	278, 699, 713
Bsp120I	GGGCCC	1 cut(s)	1017
Bsp1286I	GDGCHC	2 cut(s)	156, 1021
Bsp143I	GATC	4 cut(s)	106, 132, 448, 1266
Bsp1720I	GCTNAGC	1 cut(s)	53
Bsp19I	CCATGG	2 cut(s)	1026, 1080
BspCNI	CTCAG	4 cut(s)	45, 142, 234, 621
BspFNI	CGCG	6 cut(s)	246, 287, 522, 710, 756, 869
BspMI	ACCTGC	1 cut(s)	979
BspPI	GGATC	1 cut(s)	1274
BspQI	GCTCTTC	1 cut(s)	389
BspT107I	GGYRCC	3 cut(s)	121, 350, 682
BspTNI	GGTCTC	1 cut(s)	710
BsrBI	CCGCTC	2 cut(s)	477, 954
BsrFI	RCCGGY	6 cut(s)	142, 347, 353, 405, 646, 787
BsrI	ACTGG	4 cut(s)	675, 819, 1069, 1304
BssAI	RCCGGY	6 cut(s)	142, 347, 353, 405, 646, 787
BssMI	GATC	4 cut(s)	106, 132, 448, 1266
BssNI	GRCGYC	5 cut(s)	315, 339, 351, 357, 683
BssSI	CACGAG	1 cut(s)	977
BssT1I	CCWWGG	3 cut(s)	1008, 1026, 1080
Bst2BI	CACGAG	1 cut(s)	977
Bst2UI	CCWGG	5 cut(s)	269, 394, 827, 845, 1124
Bst4CI	ACNGT	1 cut(s)	1360
Bst6I	CTCTTC	2 cut(s)	389, 452
BstACI	GRCGYC	5 cut(s)	315, 339, 351, 357, 683
BstAPI	GCANNNNNTGC	2 cut(s)	213, 886
BstBAI	YACGTR	2 cut(s)	432, 883
BstDEI	CTNAG	4 cut(s)	53, 150, 221, 629
BstDSI	CCRYGG	5 cut(s)	567, 831, 867, 1026, 1080
BstENI	CCTNNNNNAGG	1 cut(s)	743
BstF5I	GGATG	1 cut(s)	1119
BstFNI	CGCG	6 cut(s)	246, 287, 522, 710, 756, 869
BstH2I	RGCGCY	2 cut(s)	354, 686
BstHHI	GCGC	6 cut(s)	246, 289, 353, 685, 712, 758
BstKTI	GATC	4 cut(s)	109, 135, 451, 1269
BstMAI	GTCTC	2 cut(s)	346, 710
BstMBI	GATC	4 cut(s)	106, 132, 448, 1266
BstMCI	CGRYCG	3 cut(s)	410, 573, 864
BstNI	CCWGG	5 cut(s)	269, 394, 827, 845, 1124
BstNSI	RCATGY	1 cut(s)	244
BstPAI	GACNNNNGTC	1 cut(s)	1176
BstSCI	CCNGG	9 cut(s)	267, 392, 572, 698, 699, 772, 825, 843, 1122
BstSLI	GKGCMC	1 cut(s)	1021
BstUI	CGCG	6 cut(s)	246, 287, 522, 710, 756, 869
BstV1I	GCAGC	4 cut(s)	624, 873, 1113, 1363
BstX2I	RGATCY	1 cut(s)	132
BstXI	CCANNNNNNTGG	1 cut(s)	826
BstYI	RGATCY	1 cut(s)	132
BstZI	CGGCCG	2 cut(s)	407, 570
BtgI	CCRYGG	5 cut(s)	567, 831, 867, 1026, 1080
BtgZI	GCGATG	1 cut(s)	602
BtrI	CACGTC	2 cut(s)	561, 762
BtsCI	GGATG	1 cut(s)	1119
BtsIMutI	CAGTG	1 cut(s)	1356
BveI	ACCTGC	1 cut(s)	979
CaiI	CAGNNNCTG	1 cut(s)	115
CfoI	GCGC	6 cut(s)	246, 289, 353, 685, 712, 758
Cfr10I	RCCGGY	6 cut(s)	142, 347, 353, 405, 646, 787
Cfr42I	CCGCGG	1 cut(s)	870
Cfr9I	CCCGGG	1 cut(s)	699
CpoI	CGGWCCG	2 cut(s)	15, 801
CseI	GACGC	4 cut(s)	323, 346, 634, 716
Csp6I	GTAC	2 cut(s)	678, 982
CspI	CGGWCCG	2 cut(s)	15, 801
CviAII	CATG	5 cut(s)	241, 379, 850, 1027, 1081
CviQI	GTAC	2 cut(s)	678, 982
DdeI	CTNAG	4 cut(s)	53, 150, 221, 629
DinI	GGCGCC	2 cut(s)	352, 684
DpnI	GATC	4 cut(s)	108, 134, 450, 1268
DpnII	GATC	4 cut(s)	106, 132, 448, 1266
DrdI	GACNNNNNNGTC	2 cut(s)	935, 1073
DseDI	GACNNNNNNGTC	2 cut(s)	935, 1073
EaeI	YGGCCR	6 cut(s)	407, 564, 570, 828, 846, 870
EagI	CGGCCG	2 cut(s)	407, 570
Eam1104I	CTCTTC	2 cut(s)	389, 452
EarI	CTCTTC	2 cut(s)	389, 452
EciI	GGCGGA	4 cut(s)	129, 249, 334, 725
EclXI	CGGCCG	2 cut(s)	407, 570
Eco130I	CCWWGG	3 cut(s)	1008, 1026, 1080
Eco147I	AGGCCT	1 cut(s)	599
Eco24I	GRGCYC	2 cut(s)	156, 1021
Eco31I	GGTCTC	1 cut(s)	710
Eco47I	GGWCC	7 cut(s)	15, 397, 790, 801, 928, 937, 1154
Eco52I	CGGCCG	2 cut(s)	407, 570
Eco72I	CACGTG	2 cut(s)	432, 883
Eco88I	CYCGRG	3 cut(s)	278, 699, 713
EcoNI	CCTNNNNNAGG	1 cut(s)	743
EcoO109I	RGGNCCY	3 cut(s)	166, 265, 928
EcoRII	CCWGG	5 cut(s)	267, 392, 825, 843, 1122
EcoT14I	CCWWGG	3 cut(s)	1008, 1026, 1080
EcoT38I	GRGCYC	2 cut(s)	156, 1021
EgeI	GGCGCC	2 cut(s)	352, 684
EheI	GGCGCC	2 cut(s)	352, 684
ErhI	CCWWGG	3 cut(s)	1008, 1026, 1080
Esp3I	CGTCTC	1 cut(s)	346
FaeI	CATG	5 cut(s)	244, 382, 853, 1030, 1084
FaiI	YATR	8 cut(s)	102, 218, 242, 380, 851, 1028, 1082, 1220
FaqI	GGGAC	2 cut(s)	410, 647
FatI	CATG	5 cut(s)	240, 378, 849, 1026, 1080
FauI	CCCGC	6 cut(s)	239, 491, 518, 947, 1028, 1040
FbaI	TGATCA	1 cut(s)	448
FokI	GGATG	1 cut(s)	1106
FriOI	GRGCYC	2 cut(s)	156, 1021
FspBI	CTAG	2 cut(s)	965, 1295
GlaI	GCGC	6 cut(s)	245, 288, 352, 684, 711, 757
GsuI	CTGGAG	3 cut(s)	98, 599, 658
HaeII	RGCGCY	2 cut(s)	354, 686
HgaI	GACGC	4 cut(s)	323, 346, 634, 716
HhaI	GCGC	6 cut(s)	246, 289, 353, 685, 712, 758
Hin1I	GRCGYC	5 cut(s)	315, 339, 351, 357, 683
Hin1II	CATG	5 cut(s)	244, 382, 853, 1030, 1084
Hin6I	GCGC	6 cut(s)	244, 287, 351, 683, 710, 756
HinP1I	GCGC	6 cut(s)	244, 287, 351, 683, 710, 756
HincII	GTYRAC	1 cut(s)	1066
HindII	GTYRAC	1 cut(s)	1066
HindIII	AAGCTT	1 cut(s)	1138
HinfI	GANTC	6 cut(s)	5, 10, 73, 250, 321, 1241
HphI	GGTGA	1 cut(s)	364
Hpy166II	GTNNAC	3 cut(s)	808, 835, 1066
Hpy188I	TCNGA	4 cut(s)	19, 111, 654, 1332
Hpy8I	GTNNAC	3 cut(s)	808, 835, 1066
Hpy99I	CGWCG	9 cut(s)	233, 317, 341, 362, 428, 565, 710, 1049, 1079
HpyAV	CCTTC	5 cut(s)	577, 610, 997, 1096, 1375
HpyCH4III	ACNGT	1 cut(s)	1360
HpyCH4IV	ACGT	6 cut(s)	339, 431, 560, 761, 882, 1113
HpyCH4V	TGCA	4 cut(s)	25, 216, 889, 1344
HpyF3I	CTNAG	4 cut(s)	53, 150, 221, 629
HpySE526I	ACGT	6 cut(s)	339, 431, 560, 761, 882, 1113
Hsp92I	GRCGYC	5 cut(s)	315, 339, 351, 357, 683
Hsp92II	CATG	5 cut(s)	244, 382, 853, 1030, 1084
HspAI	GCGC	6 cut(s)	244, 287, 351, 683, 710, 756
KasI	GGCGCC	2 cut(s)	350, 682
KroI	GCCGGC	4 cut(s)	142, 347, 353, 405
KroNI	GCCGGC	4 cut(s)	144, 349, 355, 407
Ksp22I	TGATCA	1 cut(s)	448
KspI	CCGCGG	1 cut(s)	870
Kzo9I	GATC	4 cut(s)	106, 132, 448, 1266
LguI	GCTCTTC	1 cut(s)	389
LmnI	GCTCC	9 cut(s)	482, 539, 545, 551, 618, 951, 1055, 1357, 1384
Lsp1109I	GCAGC	4 cut(s)	624, 873, 1113, 1363
LweI	GCATC	4 cut(s)	234, 1044, 1128, 1185
MaeI	CTAG	2 cut(s)	965, 1295
MaeII	ACGT	6 cut(s)	339, 431, 560, 761, 882, 1113
MalI	GATC	4 cut(s)	108, 134, 450, 1268
MbiI	CCGCTC	2 cut(s)	477, 954
MboI	GATC	4 cut(s)	106, 132, 448, 1266
MboII	GAAGA	3 cut(s)	376, 469, 1243
MflI	RGATCY	1 cut(s)	132
MhlI	GDGCHC	2 cut(s)	156, 1021
MlsI	TGGCCA	1 cut(s)	848
MluCI	AATT	1 cut(s)	1282
MluNI	TGGCCA	1 cut(s)	848
Mly113I	GGCGCC	2 cut(s)	351, 683
MlyI	GAGTC	1 cut(s)	4
Mox20I	TGGCCA	1 cut(s)	848
MreI	CGCCGGCG	3 cut(s)	142, 347, 353
MroNI	GCCGGC	4 cut(s)	142, 347, 353, 405
MroXI	GAANNNNTTC	1 cut(s)	1245
MscI	TGGCCA	1 cut(s)	848
MseI	TTAA	1 cut(s)	1393
MslI	CAYNNNNRTG	2 cut(s)	377, 881
Msp20I	TGGCCA	1 cut(s)	848
MspA1I	CMGCKG	2 cut(s)	869, 1055
MspR9I	CCNGG	9 cut(s)	269, 394, 574, 700, 701, 774, 827, 845, 1124
Mva1269I	GAATGC	2 cut(s)	187, 1135
MvaI	CCWGG	5 cut(s)	269, 394, 827, 845, 1124
MvnI	CGCG	6 cut(s)	246, 287, 522, 710, 756, 869
NaeI	GCCGGC	4 cut(s)	144, 349, 355, 407
NarI	GGCGCC	2 cut(s)	351, 683
NciI	CCSGG	4 cut(s)	574, 700, 701, 774
NcoI	CCATGG	2 cut(s)	1026, 1080
NdeII	GATC	4 cut(s)	106, 132, 448, 1266
NgoMIV	GCCGGC	4 cut(s)	142, 347, 353, 405
NlaIII	CATG	5 cut(s)	244, 382, 853, 1030, 1084
NmeAIII	GCCGAG	3 cut(s)	57, 187, 793
NspI	RCATGY	1 cut(s)	244
OliI	CACNNNNGTG	1 cut(s)	881
PaeI	GCATGC	1 cut(s)	244
PaeR7I	CTCGAG	2 cut(s)	278, 713
PceI	AGGCCT	1 cut(s)	599
PciSI	GCTCTTC	1 cut(s)	389
PctI	GAATGC	2 cut(s)	187, 1135
PdiI	GCCGGC	4 cut(s)	144, 349, 355, 407
PdmI	GAANNNNTTC	1 cut(s)	1245
PfeI	GAWTC	5 cut(s)	5, 73, 250, 321, 1241
PflFI	GACNNNGTC	2 cut(s)	13, 559
PflMI	CCANNNNNTGG	1 cut(s)	1014
PleI	GAGTC	1 cut(s)	4
PluTI	GGCGCC	2 cut(s)	354, 686
PmaCI	CACGTG	2 cut(s)	432, 883
PmlI	CACGTG	2 cut(s)	432, 883
PpsI	GAGTC	1 cut(s)	4
Ppu21I	YACGTR	2 cut(s)	432, 883
PpuMI	RGGWCCY	1 cut(s)	928
PshAI	GACNNNNGTC	1 cut(s)	1176
Psp5II	RGGWCCY	1 cut(s)	928
Psp6I	CCWGG	5 cut(s)	267, 392, 825, 843, 1122
PspCI	CACGTG	2 cut(s)	432, 883
PspGI	CCWGG	5 cut(s)	267, 392, 825, 843, 1122
PspOMI	GGGCCC	1 cut(s)	1017
PspPPI	RGGWCCY	1 cut(s)	928
PstNI	CAGNNNCTG	1 cut(s)	115
PsuI	RGATCY	1 cut(s)	132
PsyI	GACNNNGTC	2 cut(s)	13, 559
RsaI	GTAC	2 cut(s)	679, 983
RsaNI	GTAC	2 cut(s)	678, 982
RseI	CAYNNNNRTG	2 cut(s)	377, 881
Rsr2I	CGGWCCG	2 cut(s)	15, 801
RsrII	CGGWCCG	2 cut(s)	15, 801
SacII	CCGCGG	1 cut(s)	870
SapI	GCTCTTC	1 cut(s)	389
SaqAI	TTAA	1 cut(s)	1393
Sau3AI	GATC	4 cut(s)	106, 132, 448, 1266
SchI	GAGTC	1 cut(s)	4
ScrFI	CCNGG	9 cut(s)	269, 394, 574, 700, 701, 774, 827, 845, 1124
SduI	GDGCHC	2 cut(s)	156, 1021
SfaNI	GCATC	4 cut(s)	234, 1044, 1128, 1185
SfoI	GGCGCC	2 cut(s)	352, 684
Sfr274I	CTCGAG	2 cut(s)	278, 713
Sfr303I	CCGCGG	1 cut(s)	870
SgrAI	CRCCGGYG	3 cut(s)	142, 347, 353
SgrBI	CCGCGG	1 cut(s)	870
SinI	GGWCC	7 cut(s)	15, 397, 790, 801, 928, 937, 1154
SlaI	CTCGAG	2 cut(s)	278, 713
SmaI	CCCGGG	1 cut(s)	701
SmiMI	CAYNNNNRTG	2 cut(s)	377, 881
SmlI	CTYRAG	4 cut(s)	278, 290, 713, 1223
SmoI	CTYRAG	4 cut(s)	278, 290, 713, 1223
SphI	GCATGC	1 cut(s)	244
Sse9I	AATT	1 cut(s)	1282
SseBI	AGGCCT	1 cut(s)	599
SspDI	GGCGCC	2 cut(s)	350, 682
SspMI	CTAG	2 cut(s)	965, 1295
StuI	AGGCCT	1 cut(s)	599
StyD4I	CCNGG	9 cut(s)	267, 392, 572, 698, 699, 772, 825, 843, 1122
StyI	CCWWGG	3 cut(s)	1008, 1026, 1080
TaaI	ACNGT	1 cut(s)	1360
TaiI	ACGT	6 cut(s)	342, 434, 563, 764, 885, 1116
TaqI	TCGA	9 cut(s)	8, 71, 228, 279, 336, 554, 714, 783, 1287
TaqII	GACCGA	2 cut(s)	734, 1079
TasI	AATT	1 cut(s)	1282
TauI	GCSGC	6 cut(s)	525, 756, 843, 869, 872, 1260
TfiI	GAWTC	5 cut(s)	5, 73, 250, 321, 1241
Tru1I	TTAA	1 cut(s)	1393
Tru9I	TTAA	1 cut(s)	1393
TscAI	CASTG	1 cut(s)	1363
TseI	GCWGC	4 cut(s)	612, 886, 1101, 1376
TspDTI	ATGAA	1 cut(s)	505
TspGWI	ACGGA	2 cut(s)	793, 1063
TspMI	CCCGGG	1 cut(s)	699
TspRI	CASTG	1 cut(s)	1363
Tth111I	GACNNNGTC	2 cut(s)	13, 559
Van91I	CCANNNNNTGG	1 cut(s)	1014
VpaK11BI	GGWCC	7 cut(s)	15, 397, 790, 801, 928, 937, 1154
XagI	CCTNNNNNAGG	1 cut(s)	743
XbaI	TCTAGA	1 cut(s)	964
XceI	RCATGY	1 cut(s)	244
XcmI	CCANNNNNNNNNTGG	1 cut(s)	574
XhoI	CTCGAG	2 cut(s)	278, 713
XmaI	CCCGGG	1 cut(s)	699
XmnI	GAANNNNTTC	1 cut(s)	1245
XspI	CTAG	2 cut(s)	965, 1295
ZraI	GACGTC	1 cut(s)	340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.