Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0014306

Physical Location & Seq

Genomic Coordinates Reverse (-)

30771698 .. 30779222

Gene Structure 7525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033681

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGCTAGACCCCATGGACCTGCTCCGATCCAACCTCTCCCGGGTTCGGATCCCGGAGCCCACTAACCGCATCTACAAGCAAGAATGCTGCGTTTCTTTCGACACTCCGAGATCAGACGGTGGCTTGTTCGTTGACATGAGCACGTTTCTTGCTTTTGGGAAGGACCATGTAGGATGGAACTATGAAAAGAGTGGAAATCCTGTTTATCTGCATATAAAGCAAACTAAACTGTTGGTTCCTGAAGATAGGCCTTTAAAGAAACCAACGCTCATGGCTATAGGTGTTGATGGTGGATTTGACAACAATGAACCTGAATATGAAGAAACTCACAGTATTGTTTTGTTGCCTGATTATGTGACTCTGCCATTTCCTTCTGTTGAGCTGCCAGAGAAGGTAAGATTGGCGGTTGACAGCATTTTAATGGCTGAGGGTGCAGAGAAGAAAGAACAACTTGCAGCATGGACAGCCGATAAGAAGCAAACGAGTGTCTCAGATGTTTTCTCTTATCCGGAGGATGATAGTGTTTTAGATCCACTTTTAGCACAACATCTGGCATTTTTTGGCATTGATTTCTCCTCATTACAGAAGACAGAGATGACTACTGCTGAAAGAGAGCTTGACCAGAATACCAATTTTGACTGGAACCGAATTCAAGAAAGTGGACAGGAAGTCGAACCGATATTTGGACCTGGTTACACTGGCCTCGTCAATCTTGGAAACAGCTGCTACATGGCAGCAACCATGCAAGTAGTGTTCTCAACACATTCTTTCTATTCCAGGTACTACAAGAATCAAAGTTTGAAAACAGCATTTGAGAAGGCTCCAGCTGACCCTACTGTAGATCTGAACATGCAGCTAACAAAGCTGGGACATGGTTTGCTATCTGGTAAATACTCTGTTCCTGTATCAGAGGAAAAAGATCAGACAAATTCTATCACCCCTACCACAAATTCAAAACAGGATGGAATACCTCCTCGTATGTTCAAGGCGGTTATTGCTGCCAGTCATCCTGAATTTTCTTCCATGAGACAGCAGGATGCCTTGGAGTTCTTCCTGCACTTTCTTGACCAAGTTGAACGGGCTCATGGTGGAAGTCCTGAAATTGATCCGGCAAGGAGTTTCAAGTTTGGTATTGAAGATCGTATTCTTTGTTCATCTGGAAAAGTTGCTTACAATAGGAGACTGGACTACATTCTTTCCTTAAACATCCCGCTGCATGAAGCTACTAATAAAGAAGAGCTTGCAGCATTTCAGAAACTGAAAGCTGAAAAGATTTCGGAAGGCAAGGAAGTATCCAATGATGAAATTGTACGTCCAAGGGTTCCTCTAGAAGCTTGCCTTGCAAGCTTTTCATCACCAGAAGAGATACAGGATTTTTACAGCACTGCCTTGAAGGCCAAGACAACAGCCGTGAAGAGTGCAGGTCTAACTTCATTCCCTGACTATTTGGTGTTGCACATGCGAAAATTTGTAATGGAGGCAGGCTGGGTGCCAAAAAAGCTTGATGTCTATATAGATGTTCCTGATATCATAGATATTAGTCACATGCGCAGTAAGGGACTTCAACATGGAGAAGAGTTGCTACCAGAGAGTGTTCCTGGAGAAGAGGAGGAACCAACTAAGCCTGTGGCCGATGAGAATATTGTTACCCAACTTGTTTCAATGGGATTTAATCATCTTCACTGTCAGAAAGCTGCCATTAATACCTCAAATGTCGGAGTGGAAGAGGCAATGAATTGGCTACTTTCTCACATGGATGATCCAGATATAGACGCACCCATCTCTCAAGGCAGACAAATTGCGGTTGACCAATCAAAAGTTGATGTGTTGATATCATTTGGTTTTCAGGAAGATATCGCTCGGGCTGCATTAAAAGCATCGGGTGGTGACATTGAGAAAGCCACAGATTGGATATTCAACAATCCTGGTGCTTCTGTCTCAACTGATATGGATGCAACATCATCAGAAACTATACCTATTGCTGCCGAAGCTGGACTGCCTGATGGAGGAGGGAGATATAGACTTATTGGAATAGTAAGCCATATTGGAACGTCTACACTATGTGGTCACTATGTAGCACACATCTTTAAAGATGGTAGATGGGTTATTTTCAATGATGCGAAGGTTGGGGCTTCTGTCAATCCCCCGAAGGACATGGGATATCTTTATTTCTTTGAGAGACTAAACAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010154 GO:0016049 GO:0016579 GO:0016787 GO:0019538 GO:0019783 GO:0021700 GO:0022414 GO:0022622 GO:0030154 GO:0032501 GO:0032502 GO:0036211 GO:0036459 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0060560 GO:0061458 GO:0070011 GO:0070646 GO:0070647 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:0101005 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA UCH zf-UBP

Protein Analysis

731

Amino Acids

81.07

Weight (kDa)

4.98

Isoelectric Point (pI)

40.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UBP_var	PF17807	15 - 76	1.3e-21	Variant UBP zinc finger
UCH	PF00443	233 - 725	1.1e-43	Ubiquitin carboxyl-terminal hydrolase
UBA_7	PF22562	545 - 592	1.5e-20	UBA-like domain
UBA	PF00627	545 - 581	1.5e-06	UBA/TS-N domain
UBA_7	PF22562	603 - 642	7.3e-08	UBA-like domain
UBA	PF00627	603 - 638	2.4e-07	UBA/TS-N domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0014306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20630
fragaria_vesca	FvH4_3g21160 FvH4_3g21160
malus_domestica	MD03G1217200.v1.1 MD11G1234900.v1.1
prunus_persica	Prupe.4G192200_v2.0.a1
pyrus_communis	pycom11g20650
rosa_chinensis	RchiOBHm_Chr5g0036241
rosa_laevigata	RLG00000033681
rosa_multiflora	Rmu_sc0000247.1_g000007
rosa_roxburghii	Rroxscaffold_1G00044540
rosa_rugosa	Rorug05G0154300
rosa_samantha	Rh5AG248000 Rh5BG248600 Rh5CG279900 Rh5DG256900
rosa_wichuraiana	Rw5G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1550
Acc36I	ACCTGC	2 cut(s)	27, 1412
AccB1I	GGYRCC	1 cut(s)	1489
AccB7I	CCANNNNNTGG	1 cut(s)	1908
AccI	GTMKAC	1 cut(s)	2054
AccIII	TCCGGA	1 cut(s)	508
AciI	CCGC	5 cut(s)	67, 404, 989, 1211, 1802
AclWI	GGATC	6 cut(s)	21, 43, 56, 524, 1100, 1754
AcoI	YGGCCR	1 cut(s)	1629
AcsI	RAATTY	5 cut(s)	648, 928, 949, 1013, 1466
AcuI	CTGAAG	1 cut(s)	261
AdeI	CACNNNGTG	1 cut(s)	2063
AfaI	GTAC	2 cut(s)	782, 1311
AfiI	CCNNNNNNNGG	5 cut(s)	40, 45, 683, 1908, 2006
AhdI	GACNNNNNGTC	1 cut(s)	668
AjnI	CCWGG	4 cut(s)	688, 776, 1597, 1924
AjuI	GAANNNNNNNTTGG	4 cut(s)	383, 415, 666, 698
Alw21I	GWGCWC	1 cut(s)	143
Alw26I	GTCTC	5 cut(s)	493, 1021, 1174, 1942, 2173
AlwI	GGATC	6 cut(s)	21, 43, 56, 524, 1100, 1754
AlwNI	CAGNNNCTG	1 cut(s)	1258
Ama87I	CYCGRG	2 cut(s)	39, 1860
Aor13HI	TCCGGA	1 cut(s)	508
AoxI	GGCC	4 cut(s)	248, 700, 1395, 1629
ApoI	RAATTY	5 cut(s)	648, 928, 949, 1013, 1466
AseI	ATTAAT	1 cut(s)	1701
AspLEI	GCGC	1 cut(s)	1551
AspS9I	GGNCC	3 cut(s)	16, 163, 686
AsuC2I	CCSGG	3 cut(s)	40, 41, 53
AsuHPI	GGTGA	3 cut(s)	928, 1347, 1898
AvaI	CYCGRG	2 cut(s)	39, 1860
AvaII	GGWCC	3 cut(s)	16, 163, 686
BamHI	GGATCC	1 cut(s)	48
BanI	GGYRCC	1 cut(s)	1489
BanII	GRGCYC	2 cut(s)	60, 1084
BarI	GAAGNNNNNNTAC	2 cut(s)	1566, 1598
BbsI	GAAGAC	1 cut(s)	593
Bbv12I	GWGCWC	1 cut(s)	143
BbvCI	CCTCAGC	1 cut(s)	426
BccI	CCATC	7 cut(s)	168, 281, 956, 1787, 1997, 2087, 2094
BceAI	ACGGC	1 cut(s)	1394
BciT130I	CCWGG	4 cut(s)	690, 778, 1599, 1926
BciVI	GTATCC	1 cut(s)	1303
BcnI	CCSGG	3 cut(s)	40, 41, 53
BcoDI	GTCTC	5 cut(s)	493, 1021, 1174, 1942, 2173
BfaI	CTAG	2 cut(s)	5, 1328
BfmI	CTRYAG	2 cut(s)	276, 837
BfuAI	ACCTGC	2 cut(s)	27, 1412
BfuI	GTATCC	1 cut(s)	1303
BglI	GCCNNNNNGGC	1 cut(s)	1394
BglII	AGATCT	1 cut(s)	841
Bme1390I	CCNGG	7 cut(s)	40, 41, 53, 690, 778, 1599, 1926
Bme18I	GGWCC	3 cut(s)	16, 163, 686
BmeRI	GACNNNNNGTC	1 cut(s)	668
BmeT110I	CYCGRG	2 cut(s)	39, 1860
BmgT120I	GGNCC	3 cut(s)	16, 163, 686
BmiI	GGNNCC	8 cut(s)	50, 57, 237, 644, 822, 1323, 1491, 1614
BmrFI	CCNGG	7 cut(s)	40, 41, 53, 690, 778, 1599, 1926
BmsI	GCATC	5 cut(s)	78, 1027, 1886, 1942, 2107
BpiI	GAAGAC	1 cut(s)	593
BpmI	CTGGAG	2 cut(s)	807, 1620
Bpu10I	CCTNAGC	1 cut(s)	426
BpuEI	CTTGAG	1 cut(s)	1770
BpuMI	CCSGG	3 cut(s)	40, 41, 53
BsaJI	CCNNGG	4 cut(s)	12, 39, 1041, 1316
BsaWI	WCCGGW	1 cut(s)	508
Bsc4I	CCNNNNNNNGG	5 cut(s)	40, 45, 683, 1908, 2006
Bse1I	ACTGG	4 cut(s)	644, 703, 1002, 1188
Bse3DI	GCAATG	1 cut(s)	1737
BseAI	TCCGGA	1 cut(s)	508
BseBI	CCWGG	4 cut(s)	690, 778, 1599, 1926
BseDI	CCNNGG	4 cut(s)	12, 39, 1041, 1316
BseGI	GGATG	8 cut(s)	179, 520, 967, 1006, 1042, 1206, 1762, 1957
BseLI	CCNNNNNNNGG	5 cut(s)	40, 45, 683, 1908, 2006
BseMI	GCAATG	1 cut(s)	1737
BseMII	CTCAG	2 cut(s)	417, 504
BseNI	ACTGG	4 cut(s)	644, 703, 1002, 1188
BseRI	GAGGAG	4 cut(s)	565, 963, 1622, 2022
BseYI	CCCAGC	2 cut(s)	865, 1485
BsgI	GTGCAG	3 cut(s)	453, 1040, 1440
BshFI	GGCC	4 cut(s)	250, 702, 1397, 1631
BshNI	GGYRCC	1 cut(s)	1489
BsiHKAI	GWGCWC	1 cut(s)	143
BsiHKCI	CYCGRG	2 cut(s)	39, 1860
BsiSI	CCGG	4 cut(s)	40, 53, 509, 1109
BslFI	GGGAC	2 cut(s)	882, 1572
BslI	CCNNNNNNNGG	5 cut(s)	40, 45, 683, 1908, 2006
BsmAI	GTCTC	5 cut(s)	493, 1021, 1174, 1942, 2173
BsmFI	GGGAC	2 cut(s)	882, 1572
BsmI	GAATGC	1 cut(s)	89
BsnI	GGCC	4 cut(s)	250, 702, 1397, 1631
BsoBI	CYCGRG	2 cut(s)	39, 1860
Bsp1286I	GDGCHC	3 cut(s)	60, 143, 1084
Bsp13I	TCCGGA	1 cut(s)	508
Bsp143I	GATC	9 cut(s)	26, 48, 110, 529, 841, 919, 1105, 1138, 1759
Bsp19I	CCATGG	1 cut(s)	12
BspACI	CCGC	5 cut(s)	67, 404, 989, 1211, 1802
BspANI	GGCC	4 cut(s)	250, 702, 1397, 1631
BspCNI	CTCAG	2 cut(s)	418, 503
BspEI	TCCGGA	1 cut(s)	508
BspLI	GGNNCC	8 cut(s)	50, 57, 237, 644, 822, 1323, 1491, 1614
BspMI	ACCTGC	2 cut(s)	27, 1412
BspPI	GGATC	6 cut(s)	21, 43, 56, 524, 1100, 1754
BspQI	GCTCTTC	1 cut(s)	1230
BspT107I	GGYRCC	1 cut(s)	1489
BsrDI	GCAATG	1 cut(s)	1737
BsrI	ACTGG	4 cut(s)	644, 703, 1002, 1188
BssECI	CCNNGG	4 cut(s)	12, 39, 1041, 1316
BssMI	GATC	9 cut(s)	26, 48, 110, 529, 841, 919, 1105, 1138, 1759
BssT1I	CCWWGG	3 cut(s)	12, 1041, 1316
Bst2UI	CCWGG	4 cut(s)	690, 778, 1599, 1926
Bst4CI	ACNGT	6 cut(s)	119, 231, 332, 838, 1685, 2189
Bst6I	CTCTTC	6 cut(s)	1230, 1356, 1409, 1569, 1599, 1719
BstC8I	GCNNGC	4 cut(s)	1242, 1336, 1345, 1483
BstDEI	CTNAG	3 cut(s)	426, 490, 1620
BstDSI	CCRYGG	1 cut(s)	12
BstENI	CCTNNNNNAGG	1 cut(s)	2004
BstF5I	GGATG	8 cut(s)	179, 520, 967, 1006, 1042, 1206, 1762, 1957
BstHHI	GCGC	1 cut(s)	1551
BstKTI	GATC	9 cut(s)	29, 51, 113, 532, 844, 922, 1108, 1141, 1762
BstMAI	GTCTC	5 cut(s)	493, 1021, 1174, 1942, 2173
BstMBI	GATC	9 cut(s)	26, 48, 110, 529, 841, 919, 1105, 1138, 1759
BstNI	CCWGG	4 cut(s)	690, 778, 1599, 1926
BstNSI	RCATGY	3 cut(s)	853, 1462, 1549
BstSCI	CCNGG	7 cut(s)	38, 39, 51, 688, 776, 1597, 1924
BstSFI	CTRYAG	2 cut(s)	276, 837
BstV2I	GAAGAC	1 cut(s)	593
BstX2I	RGATCY	3 cut(s)	48, 529, 841
BstYI	RGATCY	3 cut(s)	48, 529, 841
BsuI	GTATCC	1 cut(s)	1303
BsuRI	GGCC	4 cut(s)	250, 702, 1397, 1631
BtgI	CCRYGG	1 cut(s)	12
BtsCI	GGATG	8 cut(s)	179, 520, 967, 1006, 1042, 1206, 1762, 1957
BtsI	GCAGTG	1 cut(s)	1383
BtsIMutI	CAGTG	3 cut(s)	696, 1383, 1681
BveI	ACCTGC	2 cut(s)	27, 1412
Cac8I	GCNNGC	4 cut(s)	1242, 1336, 1345, 1483
CaiI	CAGNNNCTG	1 cut(s)	1258
CfoI	GCGC	1 cut(s)	1551
Cfr13I	GGNCC	3 cut(s)	16, 163, 686
Cfr9I	CCCGGG	1 cut(s)	39
CseI	GACGC	1 cut(s)	1781
CsiI	ACCWGGT	1 cut(s)	688
Csp6I	GTAC	2 cut(s)	781, 1310
CviQI	GTAC	2 cut(s)	781, 1310
DdeI	CTNAG	3 cut(s)	426, 490, 1620
DpnI	GATC	9 cut(s)	28, 50, 112, 531, 843, 921, 1107, 1140, 1761
DpnII	GATC	9 cut(s)	26, 48, 110, 529, 841, 919, 1105, 1138, 1759
DraI	TTTAAA	2 cut(s)	255, 2089
DraIII	CACNNNGTG	1 cut(s)	2063
DriI	GACNNNNNGTC	1 cut(s)	668
EaeI	YGGCCR	1 cut(s)	1629
Eam1104I	CTCTTC	6 cut(s)	1230, 1356, 1409, 1569, 1599, 1719
Eam1105I	GACNNNNNGTC	1 cut(s)	668
EarI	CTCTTC	6 cut(s)	1230, 1356, 1409, 1569, 1599, 1719
Eco130I	CCWWGG	3 cut(s)	12, 1041, 1316
Eco147I	AGGCCT	1 cut(s)	250
Eco24I	GRGCYC	2 cut(s)	60, 1084
Eco32I	GATATC	4 cut(s)	1528, 1833, 1855, 2162
Eco47I	GGWCC	3 cut(s)	16, 163, 686
Eco57I	CTGAAG	1 cut(s)	261
Eco88I	CYCGRG	2 cut(s)	39, 1860
EcoNI	CCTNNNNNAGG	1 cut(s)	2004
EcoRI	GAATTC	1 cut(s)	648
EcoRII	CCWGG	4 cut(s)	688, 776, 1597, 1924
EcoRV	GATATC	4 cut(s)	1528, 1833, 1855, 2162
EcoT14I	CCWWGG	3 cut(s)	12, 1041, 1316
EcoT38I	GRGCYC	2 cut(s)	60, 1084
ErhI	CCWWGG	3 cut(s)	12, 1041, 1316
FalI	AAGNNNNNCTT	6 cut(s)	435, 467, 1224, 1256, 1323, 1355
FaqI	GGGAC	2 cut(s)	882, 1572
FauI	CCCGC	1 cut(s)	1218
FblI	GTMKAC	1 cut(s)	2054
FokI	GGATG	8 cut(s)	186, 527, 974, 993, 1049, 1193, 1769, 1964
FriOI	GRGCYC	2 cut(s)	60, 1084
FspBI	CTAG	2 cut(s)	5, 1328
FspI	TGCGCA	1 cut(s)	1550
GlaI	GCGC	1 cut(s)	1550
GsaI	CCCAGC	2 cut(s)	869, 1489
GsuI	CTGGAG	2 cut(s)	807, 1620
HaeIII	GGCC	4 cut(s)	250, 702, 1397, 1631
HapII	CCGG	4 cut(s)	40, 53, 509, 1109
HgaI	GACGC	1 cut(s)	1781
HhaI	GCGC	1 cut(s)	1551
Hin6I	GCGC	1 cut(s)	1549
HinP1I	GCGC	1 cut(s)	1549
HincII	GTYRAC	3 cut(s)	133, 409, 1807
HindII	GTYRAC	3 cut(s)	133, 409, 1807
HindIII	AAGCTT	3 cut(s)	1332, 1345, 1499
HinfI	GANTC	2 cut(s)	358, 790
HpaII	CCGG	4 cut(s)	40, 53, 509, 1109
HphI	GGTGA	3 cut(s)	928, 1347, 1898
Hpy166II	GTNNAC	5 cut(s)	133, 409, 662, 1807, 2055
Hpy8I	GTNNAC	5 cut(s)	133, 409, 662, 1807, 2055
HpyAV	CCTTC	8 cut(s)	154, 381, 385, 811, 1274, 1387, 2116, 2143
HpyCH4III	ACNGT	6 cut(s)	119, 231, 332, 838, 1685, 2189
HpyCH4IV	ACGT	3 cut(s)	143, 1312, 2051
HpyF3I	CTNAG	3 cut(s)	426, 490, 1620
HpySE526I	ACGT	3 cut(s)	143, 1312, 2051
HspAI	GCGC	1 cut(s)	1549
Kpn2I	TCCGGA	1 cut(s)	508
Kzo9I	GATC	9 cut(s)	26, 48, 110, 529, 841, 919, 1105, 1138, 1759
LguI	GCTCTTC	1 cut(s)	1230
LmnI	GCTCC	3 cut(s)	27, 55, 826
LweI	GCATC	5 cut(s)	78, 1027, 1886, 1942, 2107
MabI	ACCWGGT	1 cut(s)	688
MaeI	CTAG	2 cut(s)	5, 1328
MaeII	ACGT	3 cut(s)	143, 1312, 2051
MaeIII	GTNAC	6 cut(s)	355, 692, 1541, 1645, 1886, 2066
MalI	GATC	9 cut(s)	28, 50, 112, 531, 843, 921, 1107, 1140, 1761
MboI	GATC	9 cut(s)	26, 48, 110, 529, 841, 919, 1105, 1138, 1759
MflI	RGATCY	3 cut(s)	48, 529, 841
MhlI	GDGCHC	3 cut(s)	60, 143, 1084
MlyI	GAGTC	1 cut(s)	352
MmeI	TCCRAC	2 cut(s)	54, 1696
MroI	TCCGGA	1 cut(s)	508
MseI	TTAA	7 cut(s)	254, 419, 1202, 1671, 1701, 1871, 2088
MslI	CAYNNNNRTG	2 cut(s)	419, 1755
MspA1I	CMGCKG	3 cut(s)	723, 827, 1213
MspI	CCGG	4 cut(s)	40, 53, 509, 1109
MspR9I	CCNGG	7 cut(s)	40, 41, 53, 690, 778, 1599, 1926
Mva1269I	GAATGC	1 cut(s)	89
MvaI	CCWGG	4 cut(s)	690, 778, 1599, 1926
NciI	CCSGG	3 cut(s)	40, 41, 53
NcoI	CCATGG	1 cut(s)	12
NdeII	GATC	9 cut(s)	26, 48, 110, 529, 841, 919, 1105, 1138, 1759
NlaIV	GGNNCC	8 cut(s)	50, 57, 237, 644, 822, 1323, 1491, 1614
NmuCI	GTSAC	4 cut(s)	355, 1541, 1886, 2066
NsbI	TGCGCA	1 cut(s)	1550
NspI	RCATGY	3 cut(s)	853, 1462, 1549
PceI	AGGCCT	1 cut(s)	250
PciSI	GCTCTTC	1 cut(s)	1230
PctI	GAATGC	1 cut(s)	89
PfeI	GAWTC	1 cut(s)	790
PflMI	CCANNNNNTGG	1 cut(s)	1908
PfoI	TCCNGGA	2 cut(s)	51, 1597
PleI	GAGTC	1 cut(s)	352
PpsI	GAGTC	1 cut(s)	352
PshBI	ATTAAT	1 cut(s)	1701
Psp6I	CCWGG	4 cut(s)	688, 776, 1597, 1924
PspFI	CCCAGC	2 cut(s)	865, 1485
PspGI	CCWGG	4 cut(s)	688, 776, 1597, 1924
PspN4I	GGNNCC	8 cut(s)	50, 57, 237, 644, 822, 1323, 1491, 1614
PspPI	GGNCC	3 cut(s)	16, 163, 686
PsrI	GAACNNNNNNTAC	2 cut(s)	1135, 1167
PstNI	CAGNNNCTG	1 cut(s)	1258
PsuI	RGATCY	3 cut(s)	48, 529, 841
PvuII	CAGCTG	2 cut(s)	723, 827
RsaI	GTAC	2 cut(s)	782, 1311
RsaNI	GTAC	2 cut(s)	781, 1310
RseI	CAYNNNNRTG	2 cut(s)	419, 1755
SapI	GCTCTTC	1 cut(s)	1230
SaqAI	TTAA	7 cut(s)	254, 419, 1202, 1671, 1701, 1871, 2088
Sau3AI	GATC	9 cut(s)	26, 48, 110, 529, 841, 919, 1105, 1138, 1759
Sau96I	GGNCC	3 cut(s)	16, 163, 686
SchI	GAGTC	1 cut(s)	352
ScrFI	CCNGG	7 cut(s)	40, 41, 53, 690, 778, 1599, 1926
SduI	GDGCHC	3 cut(s)	60, 143, 1084
SexAI	ACCWGGT	1 cut(s)	688
SfaNI	GCATC	5 cut(s)	78, 1027, 1886, 1942, 2107
SfcI	CTRYAG	2 cut(s)	276, 837
SinI	GGWCC	3 cut(s)	16, 163, 686
SmaI	CCCGGG	1 cut(s)	41
SmiMI	CAYNNNNRTG	2 cut(s)	419, 1755
SmlI	CTYRAG	1 cut(s)	1785
SmoI	CTYRAG	1 cut(s)	1785
SseBI	AGGCCT	1 cut(s)	250
SsiI	CCGC	5 cut(s)	67, 404, 989, 1211, 1802
SspI	AATATT	1 cut(s)	1642
SspMI	CTAG	2 cut(s)	5, 1328
StuI	AGGCCT	1 cut(s)	250
StyD4I	CCNGG	7 cut(s)	38, 39, 51, 688, 776, 1597, 1924
StyI	CCWWGG	3 cut(s)	12, 1041, 1316
TaaI	ACNGT	6 cut(s)	119, 231, 332, 838, 1685, 2189
TaiI	ACGT	3 cut(s)	146, 1315, 2054
TaqI	TCGA	2 cut(s)	99, 672
TfiI	GAWTC	1 cut(s)	790
Tru1I	TTAA	7 cut(s)	254, 419, 1202, 1671, 1701, 1871, 2088
Tru9I	TTAA	7 cut(s)	254, 419, 1202, 1671, 1701, 1871, 2088
TscAI	CASTG	3 cut(s)	703, 1390, 1688
TseFI	GTSAC	4 cut(s)	355, 1541, 1886, 2066
Tsp45I	GTSAC	4 cut(s)	355, 1541, 1886, 2066
TspDTI	ATGAA	9 cut(s)	198, 321, 333, 1143, 1233, 1317, 1341, 1422, 1748
TspMI	CCCGGG	1 cut(s)	39
TspRI	CASTG	3 cut(s)	703, 1390, 1688
Van91I	CCANNNNNTGG	1 cut(s)	1908
VpaK11BI	GGWCC	3 cut(s)	16, 163, 686
VspI	ATTAAT	1 cut(s)	1701
XagI	CCTNNNNNAGG	1 cut(s)	2004
XapI	RAATTY	5 cut(s)	648, 928, 949, 1013, 1466
XbaI	TCTAGA	1 cut(s)	1327
XceI	RCATGY	3 cut(s)	853, 1462, 1549
XmaI	CCCGGG	1 cut(s)	39
XmiI	GTMKAC	1 cut(s)	2054
XspI	CTAG	2 cut(s)	5, 1328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.