50S ribosomal protein L9
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44890 |
| fragaria_vesca | FvH4_3g30600 |
| malus_domestica | MD03G1128600.v1.1 MD11G1148800.v1.1 |
| prunus_persica | Prupe.6G113200_v2.0.a1 |
| pyrus_communis | pycom11g12170 |
| rosa_chinensis | RchiOBHm_Chr5g0056671 |
| rosa_laevigata | RLG00000035119 |
| rosa_multiflora | Rmu_sc0005086.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00023680 |
| rosa_rugosa | Rorug05G0301200 |
| rosa_samantha | Rh5AG371500 Rh5BG383400 Rh5CG406500 Rh5DG396400 |
| rosa_wichuraiana | Rw5G034850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 474 |
| AciI | CCGC | 1 cut(s) | 319 |
| AcoI | YGGCCR | 1 cut(s) | 108 |
| AcsI | RAATTY | 1 cut(s) | 223 |
| AcuI | CTGAAG | 1 cut(s) | 176 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 1 cut(s) | 564 |
| AgsI | TTSAA | 4 cut(s) | 50, 359, 376, 464 |
| AjnI | CCWGG | 1 cut(s) | 174 |
| AluBI | AGCT | 7 cut(s) | 54, 140, 170, 193, 209, 406, 538 |
| AluI | AGCT | 7 cut(s) | 54, 140, 170, 193, 209, 406, 538 |
| AoxI | GGCC | 2 cut(s) | 108, 246 |
| ApeKI | GCWGC | 3 cut(s) | 190, 268, 337 |
| ApoI | RAATTY | 1 cut(s) | 223 |
| AspLEI | GCGC | 2 cut(s) | 337, 387 |
| AspS9I | GGNCC | 1 cut(s) | 247 |
| AsuHPI | GGTGA | 2 cut(s) | 391, 580 |
| BbvI | GCAGC | 3 cut(s) | 202, 255, 349 |
| BceAI | ACGGC | 1 cut(s) | 95 |
| BciT130I | CCWGG | 1 cut(s) | 176 |
| BglII | AGATCT | 1 cut(s) | 433 |
| BisI | GCNGC | 3 cut(s) | 191, 269, 338 |
| BlsI | GCNGC | 3 cut(s) | 192, 270, 339 |
| Bme1390I | CCNGG | 1 cut(s) | 176 |
| BmgT120I | GGNCC | 1 cut(s) | 247 |
| BmrFI | CCNGG | 1 cut(s) | 176 |
| BpuEI | CTTGAG | 2 cut(s) | 257, 414 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 2 cut(s) | 105, 175 |
| Bse3DI | GCAATG | 1 cut(s) | 41 |
| BseBI | CCWGG | 1 cut(s) | 176 |
| BseDI | CCNNGG | 2 cut(s) | 105, 175 |
| BseGI | GGATG | 3 cut(s) | 169, 475, 541 |
| BseMI | GCAATG | 1 cut(s) | 41 |
| BseMII | CTCAG | 1 cut(s) | 300 |
| BseXI | GCAGC | 3 cut(s) | 202, 255, 349 |
| BshFI | GGCC | 2 cut(s) | 110, 248 |
| BsmI | GAATGC | 1 cut(s) | 371 |
| BsnI | GGCC | 2 cut(s) | 110, 248 |
| Bsp143I | GATC | 1 cut(s) | 433 |
| BspACI | CCGC | 1 cut(s) | 319 |
| BspANI | GGCC | 2 cut(s) | 110, 248 |
| BspCNI | CTCAG | 1 cut(s) | 301 |
| BsrDI | GCAATG | 1 cut(s) | 41 |
| BssECI | CCNNGG | 2 cut(s) | 105, 175 |
| BssMI | GATC | 1 cut(s) | 433 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 1 cut(s) | 105 |
| Bst2UI | CCWGG | 1 cut(s) | 176 |
| Bst4CI | ACNGT | 1 cut(s) | 364 |
| Bst6I | CTCTTC | 3 cut(s) | 285, 324, 498 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstDEI | CTNAG | 1 cut(s) | 309 |
| BstF5I | GGATG | 3 cut(s) | 169, 475, 541 |
| BstHHI | GCGC | 2 cut(s) | 337, 387 |
| BstKTI | GATC | 1 cut(s) | 436 |
| BstMBI | GATC | 1 cut(s) | 433 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 116, 137, 190 |
| BstNI | CCWGG | 1 cut(s) | 176 |
| BstSCI | CCNGG | 1 cut(s) | 174 |
| BstV1I | GCAGC | 3 cut(s) | 202, 255, 349 |
| BstX2I | RGATCY | 1 cut(s) | 433 |
| BstYI | RGATCY | 1 cut(s) | 433 |
| BsuRI | GGCC | 2 cut(s) | 110, 248 |
| BtsCI | GGATG | 3 cut(s) | 169, 475, 541 |
| CfoI | GCGC | 2 cut(s) | 337, 387 |
| Cfr13I | GGNCC | 1 cut(s) | 247 |
| CseI | GACGC | 1 cut(s) | 409 |
| Csp6I | GTAC | 1 cut(s) | 563 |
| CviAII | CATG | 1 cut(s) | 27 |
| CviQI | GTAC | 1 cut(s) | 563 |
| DdeI | CTNAG | 1 cut(s) | 309 |
| DpnI | GATC | 1 cut(s) | 435 |
| DpnII | GATC | 1 cut(s) | 433 |
| EaeI | YGGCCR | 1 cut(s) | 108 |
| Eam1104I | CTCTTC | 3 cut(s) | 285, 324, 498 |
| EarI | CTCTTC | 3 cut(s) | 285, 324, 498 |
| Eco130I | CCWWGG | 1 cut(s) | 105 |
| Eco57I | CTGAAG | 1 cut(s) | 176 |
| EcoRII | CCWGG | 1 cut(s) | 174 |
| EcoT14I | CCWWGG | 1 cut(s) | 105 |
| ErhI | CCWWGG | 1 cut(s) | 105 |
| FaeI | CATG | 1 cut(s) | 30 |
| FaiI | YATR | 5 cut(s) | 28, 68, 353, 446, 522 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 177, 209 |
| FatI | CATG | 1 cut(s) | 26 |
| FauI | CCCGC | 1 cut(s) | 312 |
| FblI | GTMKAC | 1 cut(s) | 474 |
| Fnu4HI | GCNGC | 3 cut(s) | 191, 269, 338 |
| FokI | GGATG | 3 cut(s) | 176, 482, 528 |
| Fsp4HI | GCNGC | 3 cut(s) | 191, 269, 338 |
| GlaI | GCGC | 2 cut(s) | 336, 386 |
| GluI | GCNGC | 3 cut(s) | 191, 269, 338 |
| HaeIII | GGCC | 2 cut(s) | 110, 248 |
| HgaI | GACGC | 1 cut(s) | 409 |
| HhaI | GCGC | 2 cut(s) | 337, 387 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 30 |
| Hin6I | GCGC | 2 cut(s) | 335, 385 |
| HinP1I | GCGC | 2 cut(s) | 335, 385 |
| HincII | GTYRAC | 3 cut(s) | 9, 442, 475 |
| HindII | GTYRAC | 3 cut(s) | 9, 442, 475 |
| HindIII | AAGCTT | 2 cut(s) | 52, 536 |
| HinfI | GANTC | 2 cut(s) | 19, 502 |
| HphI | GGTGA | 2 cut(s) | 391, 580 |
| Hpy166II | GTNNAC | 3 cut(s) | 9, 442, 475 |
| Hpy188I | TCNGA | 1 cut(s) | 156 |
| Hpy188III | TCNNGA | 4 cut(s) | 431, 497, 506, 545 |
| Hpy8I | GTNNAC | 3 cut(s) | 9, 442, 475 |
| HpyAV | CCTTC | 1 cut(s) | 151 |
| HpyCH4III | ACNGT | 1 cut(s) | 364 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 116, 137, 190 |
| HpyF3I | CTNAG | 1 cut(s) | 309 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 1 cut(s) | 30 |
| HspAI | GCGC | 2 cut(s) | 335, 385 |
| Kzo9I | GATC | 1 cut(s) | 433 |
| LmnI | GCTCC | 1 cut(s) | 368 |
| Lsp1109I | GCAGC | 3 cut(s) | 202, 255, 349 |
| MaeIII | GTNAC | 2 cut(s) | 256, 421 |
| MalI | GATC | 1 cut(s) | 435 |
| MboI | GATC | 1 cut(s) | 433 |
| MboII | GAAGA | 3 cut(s) | 302, 341, 485 |
| MflI | RGATCY | 1 cut(s) | 433 |
| MluCI | AATT | 3 cut(s) | 150, 223, 583 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MmeI | TCCRAC | 2 cut(s) | 260, 346 |
| MnlI | CCTC | 7 cut(s) | 49, 89, 154, 286, 298, 325, 438 |
| MseI | TTAA | 1 cut(s) | 586 |
| MspR9I | CCNGG | 1 cut(s) | 176 |
| Mva1269I | GAATGC | 1 cut(s) | 371 |
| MvaI | CCWGG | 1 cut(s) | 176 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 116, 137, 190 |
| NdeII | GATC | 1 cut(s) | 433 |
| NlaIII | CATG | 1 cut(s) | 30 |
| NmuCI | GTSAC | 1 cut(s) | 421 |
| PctI | GAATGC | 1 cut(s) | 371 |
| PfeI | GAWTC | 1 cut(s) | 502 |
| PkrI | GCNGC | 3 cut(s) | 192, 270, 339 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| Psp6I | CCWGG | 1 cut(s) | 174 |
| PspGI | CCWGG | 1 cut(s) | 174 |
| PspPI | GGNCC | 1 cut(s) | 247 |
| PsuI | RGATCY | 1 cut(s) | 433 |
| RsaI | GTAC | 1 cut(s) | 564 |
| RsaNI | GTAC | 1 cut(s) | 563 |
| SalI | GTCGAC | 1 cut(s) | 473 |
| SaqAI | TTAA | 1 cut(s) | 586 |
| SatI | GCNGC | 3 cut(s) | 191, 269, 338 |
| Sau3AI | GATC | 1 cut(s) | 433 |
| Sau96I | GGNCC | 1 cut(s) | 247 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 176 |
| SmlI | CTYRAG | 2 cut(s) | 272, 429 |
| SmoI | CTYRAG | 2 cut(s) | 272, 429 |
| Sse9I | AATT | 3 cut(s) | 150, 223, 583 |
| SsiI | CCGC | 1 cut(s) | 319 |
| StyD4I | CCNGG | 1 cut(s) | 174 |
| StyI | CCWWGG | 1 cut(s) | 105 |
| TaaI | ACNGT | 1 cut(s) | 364 |
| TaqI | TCGA | 3 cut(s) | 17, 142, 474 |
| TasI | AATT | 3 cut(s) | 150, 223, 583 |
| TfiI | GAWTC | 1 cut(s) | 502 |
| Tru1I | TTAA | 1 cut(s) | 586 |
| Tru9I | TTAA | 1 cut(s) | 586 |
| TseFI | GTSAC | 1 cut(s) | 421 |
| TseI | GCWGC | 3 cut(s) | 190, 268, 337 |
| Tsp45I | GTSAC | 1 cut(s) | 421 |
| TspDTI | ATGAA | 2 cut(s) | 296, 530 |
| XapI | RAATTY | 1 cut(s) | 223 |
| XmiI | GTMKAC | 1 cut(s) | 474 |