RLG00000035501

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
67755072 .. 67755859
788 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035501

Sequence Viewer

Length: 309 bp
ATGGTGAGATTGAGGATCTGCTTCTTTCCTCCTCACAAAGAGATAGAGAGCGAAGGGAGTAAGAGGAAGAAGAAGAGATTCAACAGTAAGCAAGTAAACTATGGAAAGAGGGAAGAACTTCCTGCTGTATGTTCCTATGCGGAATCAAATCCAATTGAAGCAAGGTTCAATTTCGAATTGGAGAATAAGACGATTGCTCATTATAACGCTGCACCTACTTTGATTTGGCCTGTATTAACTTGCAAAAATATAGTTCAAACCAAACTGAAAGGAACATTTAATGAGGTTGCAAATGTCTTCCAAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

103

Amino Acids

11.85

Weight (kDa)

9.41

Isoelectric Point (pI)

63.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 204
AciI CCGC 1 cut(s) 140
AclWI GGATC 1 cut(s) 23
AgsI TTSAA 4 cut(s) 82, 158, 169, 257
AlwI GGATC 1 cut(s) 23
AoxI GGCC 1 cut(s) 227
ApeKI GCWGC 1 cut(s) 209
Asp700I GAANNNNTTC 2 cut(s) 77, 117
AsuHPI GGTGA 1 cut(s) 16
AsuII TTCGAA 1 cut(s) 174
BbsI GAAGAC 1 cut(s) 289
BbvI GCAGC 1 cut(s) 196
BisI GCNGC 1 cut(s) 210
BlsI GCNGC 1 cut(s) 211
BpiI GAAGAC 1 cut(s) 289
Bpu14I TTCGAA 1 cut(s) 174
BseRI GAGGAG 1 cut(s) 21
BseXI GCAGC 1 cut(s) 196
BsgI GTGCAG 1 cut(s) 195
BshFI GGCC 1 cut(s) 229
BsnI GGCC 1 cut(s) 229
Bsp119I TTCGAA 1 cut(s) 174
Bsp143I GATC 1 cut(s) 15
BspACI CCGC 1 cut(s) 140
BspANI GGCC 1 cut(s) 229
BspPI GGATC 1 cut(s) 23
BspT104I TTCGAA 1 cut(s) 174
BssMI GATC 1 cut(s) 15
Bst4CI ACNGT 1 cut(s) 86
Bst6I CTCTTC 1 cut(s) 68
BstBI TTCGAA 1 cut(s) 174
BstKTI GATC 1 cut(s) 18
BstMBI GATC 1 cut(s) 15
BstV1I GCAGC 1 cut(s) 196
BstV2I GAAGAC 1 cut(s) 289
BstX2I RGATCY 1 cut(s) 15
BstYI RGATCY 1 cut(s) 15
BsuRI GGCC 1 cut(s) 229
CviJI RGCY 1 cut(s) 229
CviKI_1 RGCY 1 cut(s) 229
DpnI GATC 1 cut(s) 17
DpnII GATC 1 cut(s) 15
Eam1104I CTCTTC 1 cut(s) 68
EarI CTCTTC 1 cut(s) 68
FaiI YATR 5 cut(s) 102, 130, 138, 204, 251
Fnu4HI GCNGC 1 cut(s) 210
Fsp4HI GCNGC 1 cut(s) 210
GluI GCNGC 1 cut(s) 210
HaeIII GGCC 1 cut(s) 229
HinfI GANTC 2 cut(s) 78, 143
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 97
Hpy8I GTNNAC 1 cut(s) 97
HpyAV CCTTC 1 cut(s) 47
HpyCH4III ACNGT 1 cut(s) 86
HpyCH4V TGCA 3 cut(s) 212, 243, 290
Kzo9I GATC 1 cut(s) 15
LpnPI CCDG 2 cut(s) 135, 243
Lsp1109I GCAGC 1 cut(s) 196
MalI GATC 1 cut(s) 17
MboI GATC 1 cut(s) 15
MboII GAAGA 5 cut(s) 79, 82, 85, 125, 289
MfeI CAATTG 1 cut(s) 153
MflI RGATCY 1 cut(s) 15
MluCI AATT 3 cut(s) 153, 169, 176
MnlI CCTC 6 cut(s) 6, 39, 42, 57, 102, 277
MroXI GAANNNNTTC 2 cut(s) 77, 117
MseI TTAA 2 cut(s) 236, 279
MunI CAATTG 1 cut(s) 153
NdeII GATC 1 cut(s) 15
NspV TTCGAA 1 cut(s) 174
PdmI GAANNNNTTC 2 cut(s) 77, 117
PfeI GAWTC 2 cut(s) 78, 143
PkrI GCNGC 1 cut(s) 211
PsiI TTATAA 1 cut(s) 204
PsuI RGATCY 1 cut(s) 15
SaqAI TTAA 2 cut(s) 236, 279
SatI GCNGC 1 cut(s) 210
Sau3AI GATC 1 cut(s) 15
SetI ASST 3 cut(s) 167, 217, 288
SfuI TTCGAA 1 cut(s) 174
SgeI CNNG 5 cut(s) 104, 134, 174, 242, 252
Sse9I AATT 3 cut(s) 153, 169, 176
SsiI CCGC 1 cut(s) 140
TaaI ACNGT 1 cut(s) 86
TaqI TCGA 1 cut(s) 174
TasI AATT 3 cut(s) 153, 169, 176
TfiI GAWTC 2 cut(s) 78, 143
Tru1I TTAA 2 cut(s) 236, 279
Tru9I TTAA 2 cut(s) 236, 279
TseI GCWGC 1 cut(s) 209
XmnI GAANNNNTTC 2 cut(s) 77, 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.