Belongs to the helicase family. Dicer subfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom11g03380 |
| rosa_chinensis | RchiOBHm_Chr6g0271181 RchiOBHm_Chr6g0312091 |
| rosa_multiflora | Rmu_co8257479.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00192870 |
| rosa_rugosa | Rorug01G0357500 Rorug05G0506300 |
| rosa_samantha | Rh5AG241900 Rh5BG511100 Rh6AG509300 Rh7CG510200 Rh7DG477800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 71 |
| AciI | CCGC | 2 cut(s) | 75, 78 |
| AcsI | RAATTY | 1 cut(s) | 395 |
| AgsI | TTSAA | 1 cut(s) | 96 |
| AluBI | AGCT | 2 cut(s) | 164, 200 |
| AluI | AGCT | 2 cut(s) | 164, 200 |
| Alw26I | GTCTC | 1 cut(s) | 167 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 182 |
| AoxI | GGCC | 2 cut(s) | 22, 270 |
| ApeKI | GCWGC | 1 cut(s) | 42 |
| ApoI | RAATTY | 1 cut(s) | 395 |
| AspLEI | GCGC | 1 cut(s) | 102 |
| AspS9I | GGNCC | 1 cut(s) | 271 |
| AsuHPI | GGTGA | 1 cut(s) | 257 |
| BanI | GGYRCC | 1 cut(s) | 71 |
| BbvI | GCAGC | 1 cut(s) | 54 |
| BccI | CCATC | 1 cut(s) | 163 |
| BclI | TGATCA | 2 cut(s) | 64, 258 |
| BcoDI | GTCTC | 1 cut(s) | 167 |
| BfaI | CTAG | 1 cut(s) | 144 |
| BfoI | RGCGCY | 1 cut(s) | 103 |
| BisI | GCNGC | 3 cut(s) | 43, 75, 78 |
| BlsI | GCNGC | 3 cut(s) | 44, 76, 79 |
| BmgT120I | GGNCC | 1 cut(s) | 271 |
| BmiI | GGNNCC | 3 cut(s) | 73, 273, 352 |
| BmsI | GCATC | 2 cut(s) | 195, 355 |
| BsaJI | CCNNGG | 1 cut(s) | 354 |
| Bse1I | ACTGG | 1 cut(s) | 187 |
| BseDI | CCNNGG | 1 cut(s) | 354 |
| BseNI | ACTGG | 1 cut(s) | 187 |
| BseRI | GAGGAG | 1 cut(s) | 353 |
| BseXI | GCAGC | 1 cut(s) | 54 |
| BshFI | GGCC | 2 cut(s) | 24, 272 |
| BshNI | GGYRCC | 1 cut(s) | 71 |
| BsmAI | GTCTC | 1 cut(s) | 167 |
| BsnI | GGCC | 2 cut(s) | 24, 272 |
| Bsp143I | GATC | 3 cut(s) | 64, 82, 258 |
| BspACI | CCGC | 2 cut(s) | 75, 78 |
| BspANI | GGCC | 2 cut(s) | 24, 272 |
| BspLI | GGNNCC | 3 cut(s) | 73, 273, 352 |
| BspT107I | GGYRCC | 1 cut(s) | 71 |
| BsrI | ACTGG | 1 cut(s) | 187 |
| BssECI | CCNNGG | 1 cut(s) | 354 |
| BssMI | GATC | 3 cut(s) | 64, 82, 258 |
| BssT1I | CCWWGG | 1 cut(s) | 354 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstH2I | RGCGCY | 1 cut(s) | 103 |
| BstHHI | GCGC | 1 cut(s) | 102 |
| BstKTI | GATC | 3 cut(s) | 67, 85, 261 |
| BstMAI | GTCTC | 1 cut(s) | 167 |
| BstMBI | GATC | 3 cut(s) | 64, 82, 258 |
| BstV1I | GCAGC | 1 cut(s) | 54 |
| BsuRI | GGCC | 2 cut(s) | 24, 272 |
| BtsIMutI | CAGTG | 2 cut(s) | 48, 57 |
| CaiI | CAGNNNCTG | 1 cut(s) | 182 |
| CfoI | GCGC | 1 cut(s) | 102 |
| Cfr13I | GGNCC | 1 cut(s) | 271 |
| CviAII | CATG | 3 cut(s) | 68, 227, 407 |
| CviJI | RGCY | 6 cut(s) | 24, 45, 164, 200, 272, 353 |
| CviKI_1 | RGCY | 6 cut(s) | 24, 45, 164, 200, 272, 353 |
| DpnI | GATC | 3 cut(s) | 66, 84, 260 |
| DpnII | GATC | 3 cut(s) | 64, 82, 258 |
| DraI | TTTAAA | 2 cut(s) | 331, 400 |
| Eco130I | CCWWGG | 1 cut(s) | 354 |
| EcoT14I | CCWWGG | 1 cut(s) | 354 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 354 |
| FaeI | CATG | 3 cut(s) | 71, 230, 410 |
| FaiI | YATR | 5 cut(s) | 69, 135, 228, 263, 408 |
| FatI | CATG | 3 cut(s) | 67, 226, 406 |
| FbaI | TGATCA | 2 cut(s) | 64, 258 |
| Fnu4HI | GCNGC | 3 cut(s) | 43, 75, 78 |
| Fsp4HI | GCNGC | 3 cut(s) | 43, 75, 78 |
| FspBI | CTAG | 1 cut(s) | 144 |
| GlaI | GCGC | 1 cut(s) | 101 |
| GluI | GCNGC | 3 cut(s) | 43, 75, 78 |
| HaeII | RGCGCY | 1 cut(s) | 103 |
| HaeIII | GGCC | 2 cut(s) | 24, 272 |
| HhaI | GCGC | 1 cut(s) | 102 |
| Hin1II | CATG | 3 cut(s) | 71, 230, 410 |
| Hin6I | GCGC | 1 cut(s) | 100 |
| HinP1I | GCGC | 1 cut(s) | 100 |
| HinfI | GANTC | 1 cut(s) | 28 |
| HphI | GGTGA | 1 cut(s) | 257 |
| Hpy188I | TCNGA | 1 cut(s) | 123 |
| HpyAV | CCTTC | 2 cut(s) | 14, 108 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| Hsp92II | CATG | 3 cut(s) | 71, 230, 410 |
| HspAI | GCGC | 1 cut(s) | 100 |
| Ksp22I | TGATCA | 2 cut(s) | 64, 258 |
| Kzo9I | GATC | 3 cut(s) | 64, 82, 258 |
| LmnI | GCTCC | 2 cut(s) | 350, 379 |
| LpnPI | CCDG | 7 cut(s) | 24, 38, 47, 124, 162, 168, 228 |
| Lsp1109I | GCAGC | 1 cut(s) | 54 |
| LweI | GCATC | 2 cut(s) | 195, 355 |
| MaeI | CTAG | 1 cut(s) | 144 |
| MaeIII | GTNAC | 1 cut(s) | 245 |
| MalI | GATC | 3 cut(s) | 66, 84, 260 |
| MboI | GATC | 3 cut(s) | 64, 82, 258 |
| MboII | GAAGA | 1 cut(s) | 29 |
| MluCI | AATT | 4 cut(s) | 219, 254, 299, 395 |
| MnlI | CCTC | 7 cut(s) | 7, 56, 113, 130, 144, 298, 331 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 4 cut(s) | 312, 330, 375, 399 |
| NdeII | GATC | 3 cut(s) | 64, 82, 258 |
| NlaIII | CATG | 3 cut(s) | 71, 230, 410 |
| NlaIV | GGNNCC | 3 cut(s) | 73, 273, 352 |
| NmuCI | GTSAC | 1 cut(s) | 245 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PfeI | GAWTC | 1 cut(s) | 28 |
| PkrI | GCNGC | 3 cut(s) | 44, 76, 79 |
| PspN4I | GGNNCC | 3 cut(s) | 73, 273, 352 |
| PspPI | GGNCC | 1 cut(s) | 271 |
| PstNI | CAGNNNCTG | 1 cut(s) | 182 |
| SaqAI | TTAA | 4 cut(s) | 312, 330, 375, 399 |
| SatI | GCNGC | 3 cut(s) | 43, 75, 78 |
| Sau3AI | GATC | 3 cut(s) | 64, 82, 258 |
| Sau96I | GGNCC | 1 cut(s) | 271 |
| SetI | ASST | 5 cut(s) | 119, 141, 166, 202, 309 |
| SfaNI | GCATC | 2 cut(s) | 195, 355 |
| Sse9I | AATT | 4 cut(s) | 219, 254, 299, 395 |
| SsiI | CCGC | 2 cut(s) | 75, 78 |
| SspMI | CTAG | 1 cut(s) | 144 |
| StyI | CCWWGG | 1 cut(s) | 354 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TasI | AATT | 4 cut(s) | 219, 254, 299, 395 |
| TauI | GCSGC | 2 cut(s) | 77, 80 |
| TfiI | GAWTC | 1 cut(s) | 28 |
| Tru1I | TTAA | 4 cut(s) | 312, 330, 375, 399 |
| Tru9I | TTAA | 4 cut(s) | 312, 330, 375, 399 |
| TscAI | CASTG | 2 cut(s) | 55, 64 |
| TseFI | GTSAC | 1 cut(s) | 245 |
| TseI | GCWGC | 1 cut(s) | 42 |
| Tsp45I | GTSAC | 1 cut(s) | 245 |
| TspDTI | ATGAA | 3 cut(s) | 231, 272, 281 |
| TspGWI | ACGGA | 1 cut(s) | 363 |
| TspRI | CASTG | 2 cut(s) | 55, 64 |
| XapI | RAATTY | 1 cut(s) | 395 |
| XspI | CTAG | 1 cut(s) | 144 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |