Seed dormancy control
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15320 AT1G15320 |
| fragaria_vesca | FvH4_6g29541 |
| malus_domestica | MD17G1213300.v1.1 |
| prunus_persica | Prupe.3G088600_v2.0.a1 Prupe.3G088600_v2.0.a1 |
| pyrus_communis | pycom17g21820 |
| rosa_chinensis | RchiOBHm_Chr2g0135091 |
| rosa_laevigata | RLG00000019441 |
| rosa_multiflora | Rmu_co8282347.1_g000001 Rmu_sc0001385.1_g000014 Rmu_sc0003543.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00109490 |
| rosa_rugosa | Rorug02G0322700 |
| rosa_samantha | Rh2AG371900 Rh2BG379600 Rh2CG358700 Rh2DG396200 |
| rosa_wichuraiana | Rw0G013560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 62 |
| AclWI | GGATC | 2 cut(s) | 26, 121 |
| AflIII | ACRYGT | 1 cut(s) | 65 |
| AgsI | TTSAA | 5 cut(s) | 104, 145, 155, 190, 211 |
| AluBI | AGCT | 1 cut(s) | 173 |
| AluI | AGCT | 1 cut(s) | 173 |
| AlwI | GGATC | 2 cut(s) | 26, 121 |
| ApeKI | GCWGC | 2 cut(s) | 236, 290 |
| AspS9I | GGNCC | 1 cut(s) | 314 |
| AsuHPI | GGTGA | 1 cut(s) | 272 |
| AvaII | GGWCC | 1 cut(s) | 314 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 15, 47 |
| BbvI | GCAGC | 2 cut(s) | 248, 302 |
| BccI | CCATC | 1 cut(s) | 40 |
| BciVI | GTATCC | 1 cut(s) | 80 |
| BfuI | GTATCC | 1 cut(s) | 80 |
| BisI | GCNGC | 2 cut(s) | 237, 291 |
| BlpI | GCTNAGC | 1 cut(s) | 174 |
| BlsI | GCNGC | 2 cut(s) | 238, 292 |
| Bme18I | GGWCC | 1 cut(s) | 314 |
| BmgT120I | GGNCC | 1 cut(s) | 314 |
| BmiI | GGNNCC | 2 cut(s) | 305, 315 |
| BmsI | GCATC | 2 cut(s) | 223, 262 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 174 |
| BsaBI | GATNNNNATC | 1 cut(s) | 17 |
| BsaJI | CCNNGG | 1 cut(s) | 120 |
| Bse1I | ACTGG | 3 cut(s) | 201, 283, 317 |
| Bse8I | GATNNNNATC | 1 cut(s) | 17 |
| BseDI | CCNNGG | 1 cut(s) | 120 |
| BseJI | GATNNNNATC | 1 cut(s) | 17 |
| BseMII | CTCAG | 4 cut(s) | 42, 129, 188, 196 |
| BseNI | ACTGG | 3 cut(s) | 201, 283, 317 |
| BseRI | GAGGAG | 1 cut(s) | 56 |
| BseXI | GCAGC | 2 cut(s) | 248, 302 |
| Bsp143I | GATC | 2 cut(s) | 18, 113 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 174 |
| BspCNI | CTCAG | 4 cut(s) | 43, 130, 187, 195 |
| BspHI | TCATGA | 1 cut(s) | 7 |
| BspLI | GGNNCC | 2 cut(s) | 305, 315 |
| BspPI | GGATC | 2 cut(s) | 26, 121 |
| BsrI | ACTGG | 3 cut(s) | 201, 283, 317 |
| BssECI | CCNNGG | 1 cut(s) | 120 |
| BssMI | GATC | 2 cut(s) | 18, 113 |
| BssT1I | CCWWGG | 1 cut(s) | 120 |
| Bst6I | CTCTTC | 1 cut(s) | 18 |
| BstDEI | CTNAG | 5 cut(s) | 51, 138, 174, 182, 247 |
| BstKTI | GATC | 2 cut(s) | 21, 116 |
| BstMBI | GATC | 2 cut(s) | 18, 113 |
| BstNSI | RCATGY | 1 cut(s) | 69 |
| BstV1I | GCAGC | 2 cut(s) | 248, 302 |
| BstX2I | RGATCY | 1 cut(s) | 113 |
| BstYI | RGATCY | 1 cut(s) | 113 |
| BsuI | GTATCC | 1 cut(s) | 80 |
| BtsIMutI | CAGTG | 1 cut(s) | 194 |
| CciI | TCATGA | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 1 cut(s) | 314 |
| CviAII | CATG | 2 cut(s) | 8, 66 |
| CviJI | RGCY | 4 cut(s) | 50, 125, 173, 338 |
| CviKI_1 | RGCY | 4 cut(s) | 50, 125, 173, 338 |
| DdeI | CTNAG | 5 cut(s) | 51, 138, 174, 182, 247 |
| DpnI | GATC | 2 cut(s) | 20, 115 |
| DpnII | GATC | 2 cut(s) | 18, 113 |
| Eam1104I | CTCTTC | 1 cut(s) | 18 |
| EarI | CTCTTC | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 1 cut(s) | 120 |
| Eco47I | GGWCC | 1 cut(s) | 314 |
| EcoT14I | CCWWGG | 1 cut(s) | 120 |
| ErhI | CCWWGG | 1 cut(s) | 120 |
| FaeI | CATG | 2 cut(s) | 11, 69 |
| FaiI | YATR | 3 cut(s) | 9, 67, 326 |
| FatI | CATG | 2 cut(s) | 7, 65 |
| FblI | GTMKAC | 1 cut(s) | 62 |
| Fnu4HI | GCNGC | 2 cut(s) | 237, 291 |
| Fsp4HI | GCNGC | 2 cut(s) | 237, 291 |
| GluI | GCNGC | 2 cut(s) | 237, 291 |
| Hin1II | CATG | 2 cut(s) | 11, 69 |
| HinfI | GANTC | 2 cut(s) | 13, 55 |
| HphI | GGTGA | 1 cut(s) | 272 |
| Hpy166II | GTNNAC | 2 cut(s) | 63, 133 |
| Hpy188I | TCNGA | 2 cut(s) | 18, 139 |
| Hpy188III | TCNNGA | 3 cut(s) | 8, 145, 307 |
| Hpy8I | GTNNAC | 2 cut(s) | 63, 133 |
| HpyAV | CCTTC | 2 cut(s) | 89, 304 |
| HpyCH4V | TGCA | 2 cut(s) | 236, 290 |
| HpyF3I | CTNAG | 5 cut(s) | 51, 138, 174, 182, 247 |
| Hsp92II | CATG | 2 cut(s) | 11, 69 |
| Kzo9I | GATC | 2 cut(s) | 18, 113 |
| LmnI | GCTCC | 1 cut(s) | 94 |
| LpnPI | CCDG | 8 cut(s) | 93, 169, 182, 296, 311, 320, 330, 342 |
| Lsp1109I | GCAGC | 2 cut(s) | 248, 302 |
| LweI | GCATC | 2 cut(s) | 223, 262 |
| MalI | GATC | 2 cut(s) | 20, 115 |
| MboI | GATC | 2 cut(s) | 18, 113 |
| MboII | GAAGA | 4 cut(s) | 35, 160, 223, 226 |
| MflI | RGATCY | 1 cut(s) | 113 |
| MluCI | AATT | 2 cut(s) | 200, 228 |
| MnlI | CCTC | 5 cut(s) | 19, 34, 83, 253, 294 |
| NdeII | GATC | 2 cut(s) | 18, 113 |
| NlaIII | CATG | 2 cut(s) | 11, 69 |
| NlaIV | GGNNCC | 2 cut(s) | 305, 315 |
| NspI | RCATGY | 1 cut(s) | 69 |
| PagI | TCATGA | 1 cut(s) | 7 |
| PciI | ACATGT | 1 cut(s) | 65 |
| PfeI | GAWTC | 2 cut(s) | 13, 55 |
| PkrI | GCNGC | 2 cut(s) | 238, 292 |
| PscI | ACATGT | 1 cut(s) | 65 |
| PspN4I | GGNNCC | 2 cut(s) | 305, 315 |
| PspPI | GGNCC | 1 cut(s) | 314 |
| PsuI | RGATCY | 1 cut(s) | 113 |
| SatI | GCNGC | 2 cut(s) | 237, 291 |
| Sau3AI | GATC | 2 cut(s) | 18, 113 |
| Sau96I | GGNCC | 1 cut(s) | 314 |
| SetI | ASST | 5 cut(s) | 81, 112, 175, 188, 305 |
| SfaNI | GCATC | 2 cut(s) | 223, 262 |
| SinI | GGWCC | 1 cut(s) | 314 |
| Sse9I | AATT | 2 cut(s) | 200, 228 |
| StyI | CCWWGG | 1 cut(s) | 120 |
| TaqI | TCGA | 1 cut(s) | 21 |
| TasI | AATT | 2 cut(s) | 200, 228 |
| TfiI | GAWTC | 2 cut(s) | 13, 55 |
| TscAI | CASTG | 1 cut(s) | 201 |
| TseI | GCWGC | 2 cut(s) | 236, 290 |
| TspDTI | ATGAA | 1 cut(s) | 240 |
| TspGWI | ACGGA | 1 cut(s) | 72 |
| TspRI | CASTG | 1 cut(s) | 201 |
| VpaK11BI | GGWCC | 1 cut(s) | 314 |
| XceI | RCATGY | 1 cut(s) | 69 |
| XmiI | GTMKAC | 1 cut(s) | 62 |