SNW SKI-interacting
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g19831 |
| rosa_chinensis | RchiOBHm_Chr7g0229201 |
| rosa_multiflora | Rmu_co8402903.1_g000001 Rmu_sc0005791.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00132200 |
| rosa_rugosa | Rorug04G0358600 |
| rosa_samantha | Rh1BG124700 Rh2BG212300 Rh2CG231300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 202 |
| AclWI | GGATC | 2 cut(s) | 65, 255 |
| AcyI | GRCGYC | 1 cut(s) | 199 |
| AfeI | AGCGCT | 2 cut(s) | 89, 257 |
| AgsI | TTSAA | 2 cut(s) | 33, 94 |
| AluBI | AGCT | 1 cut(s) | 142 |
| AluI | AGCT | 1 cut(s) | 142 |
| Alw26I | GTCTC | 2 cut(s) | 98, 190 |
| AlwI | GGATC | 2 cut(s) | 65, 255 |
| Aor51HI | AGCGCT | 2 cut(s) | 89, 257 |
| ApeKI | GCWGC | 2 cut(s) | 85, 258 |
| AspLEI | GCGC | 2 cut(s) | 90, 258 |
| BbvI | GCAGC | 2 cut(s) | 97, 245 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 240 |
| BcoDI | GTCTC | 2 cut(s) | 98, 190 |
| BfmI | CTRYAG | 1 cut(s) | 259 |
| BfoI | RGCGCY | 2 cut(s) | 91, 259 |
| BisI | GCNGC | 2 cut(s) | 86, 259 |
| BlsI | GCNGC | 2 cut(s) | 87, 260 |
| BoxI | GACNNNNGTC | 1 cut(s) | 110 |
| BsaHI | GRCGYC | 1 cut(s) | 199 |
| BsaJI | CCNNGG | 1 cut(s) | 74 |
| BseDI | CCNNGG | 1 cut(s) | 74 |
| BseGI | GGATG | 1 cut(s) | 231 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BseXI | GCAGC | 2 cut(s) | 97, 245 |
| BsmAI | GTCTC | 2 cut(s) | 98, 190 |
| BsmBI | CGTCTC | 1 cut(s) | 190 |
| Bsp143I | GATC | 3 cut(s) | 70, 216, 247 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspHI | TCATGA | 1 cut(s) | 219 |
| BspMAI | CTGCAG | 1 cut(s) | 263 |
| BspPI | GGATC | 2 cut(s) | 65, 255 |
| BssECI | CCNNGG | 1 cut(s) | 74 |
| BssMI | GATC | 3 cut(s) | 70, 216, 247 |
| BssNI | GRCGYC | 1 cut(s) | 199 |
| BstACI | GRCGYC | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 1 cut(s) | 263 |
| BstDEI | CTNAG | 1 cut(s) | 102 |
| BstDSI | CCRYGG | 1 cut(s) | 74 |
| BstF5I | GGATG | 1 cut(s) | 231 |
| BstH2I | RGCGCY | 2 cut(s) | 91, 259 |
| BstHHI | GCGC | 2 cut(s) | 90, 258 |
| BstKTI | GATC | 3 cut(s) | 73, 219, 250 |
| BstMAI | GTCTC | 2 cut(s) | 98, 190 |
| BstMBI | GATC | 3 cut(s) | 70, 216, 247 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 262 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 110 |
| BstSFI | CTRYAG | 1 cut(s) | 259 |
| BstV1I | GCAGC | 2 cut(s) | 97, 245 |
| BtgI | CCRYGG | 1 cut(s) | 74 |
| BtsCI | GGATG | 1 cut(s) | 231 |
| Cac8I | GCNNGC | 1 cut(s) | 263 |
| CciI | TCATGA | 1 cut(s) | 219 |
| CfoI | GCGC | 2 cut(s) | 90, 258 |
| CviAII | CATG | 1 cut(s) | 220 |
| CviJI | RGCY | 4 cut(s) | 8, 101, 142, 188 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 101, 142, 188 |
| DdeI | CTNAG | 1 cut(s) | 102 |
| DpnI | GATC | 3 cut(s) | 72, 218, 249 |
| DpnII | GATC | 3 cut(s) | 70, 216, 247 |
| Eco47III | AGCGCT | 2 cut(s) | 89, 257 |
| Esp3I | CGTCTC | 1 cut(s) | 190 |
| FaeI | CATG | 1 cut(s) | 223 |
| FaiI | YATR | 5 cut(s) | 66, 194, 210, 212, 221 |
| FatI | CATG | 1 cut(s) | 219 |
| FauNDI | CATATG | 1 cut(s) | 210 |
| Fnu4HI | GCNGC | 2 cut(s) | 86, 259 |
| FokI | GGATG | 1 cut(s) | 238 |
| Fsp4HI | GCNGC | 2 cut(s) | 86, 259 |
| GlaI | GCGC | 2 cut(s) | 89, 257 |
| GluI | GCNGC | 2 cut(s) | 86, 259 |
| HaeII | RGCGCY | 2 cut(s) | 91, 259 |
| HhaI | GCGC | 2 cut(s) | 90, 258 |
| Hin1I | GRCGYC | 1 cut(s) | 199 |
| Hin1II | CATG | 1 cut(s) | 223 |
| Hin6I | GCGC | 2 cut(s) | 88, 256 |
| HinP1I | GCGC | 2 cut(s) | 88, 256 |
| HindIII | AAGCTT | 1 cut(s) | 140 |
| HinfI | GANTC | 1 cut(s) | 149 |
| Hpy188I | TCNGA | 1 cut(s) | 12 |
| Hpy188III | TCNNGA | 1 cut(s) | 220 |
| HpyAV | CCTTC | 2 cut(s) | 39, 223 |
| HpyCH4IV | ACGT | 2 cut(s) | 199, 204 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 261 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 262 |
| HpyF3I | CTNAG | 1 cut(s) | 102 |
| HpySE526I | ACGT | 2 cut(s) | 199, 204 |
| Hsp92I | GRCGYC | 1 cut(s) | 199 |
| Hsp92II | CATG | 1 cut(s) | 223 |
| HspAI | GCGC | 2 cut(s) | 88, 256 |
| Kzo9I | GATC | 3 cut(s) | 70, 216, 247 |
| LpnPI | CCDG | 3 cut(s) | 38, 67, 247 |
| Lsp1109I | GCAGC | 2 cut(s) | 97, 245 |
| MaeII | ACGT | 2 cut(s) | 199, 204 |
| MaeIII | GTNAC | 1 cut(s) | 200 |
| MalI | GATC | 3 cut(s) | 72, 218, 249 |
| MboI | GATC | 3 cut(s) | 70, 216, 247 |
| MboII | GAAGA | 1 cut(s) | 30 |
| MluCI | AATT | 1 cut(s) | 130 |
| MlyI | GAGTC | 1 cut(s) | 158 |
| MnlI | CCTC | 1 cut(s) | 216 |
| MseI | TTAA | 1 cut(s) | 144 |
| MslI | CAYNNNNRTG | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 262 |
| NdeI | CATATG | 1 cut(s) | 210 |
| NdeII | GATC | 3 cut(s) | 70, 216, 247 |
| NlaIII | CATG | 1 cut(s) | 223 |
| NmuCI | GTSAC | 1 cut(s) | 200 |
| PagI | TCATGA | 1 cut(s) | 219 |
| PkrI | GCNGC | 2 cut(s) | 87, 260 |
| PleI | GAGTC | 1 cut(s) | 157 |
| PpsI | GAGTC | 1 cut(s) | 157 |
| PshAI | GACNNNNGTC | 1 cut(s) | 110 |
| PstI | CTGCAG | 1 cut(s) | 263 |
| RseI | CAYNNNNRTG | 1 cut(s) | 224 |
| SaqAI | TTAA | 1 cut(s) | 144 |
| SatI | GCNGC | 2 cut(s) | 86, 259 |
| Sau3AI | GATC | 3 cut(s) | 70, 216, 247 |
| SchI | GAGTC | 1 cut(s) | 158 |
| SetI | ASST | 3 cut(s) | 144, 202, 207 |
| SfcI | CTRYAG | 1 cut(s) | 259 |
| SgeI | CNNG | 5 cut(s) | 37, 87, 94, 215, 232 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 224 |
| Sse9I | AATT | 1 cut(s) | 130 |
| TaiI | ACGT | 2 cut(s) | 202, 207 |
| TaqI | TCGA | 1 cut(s) | 250 |
| TasI | AATT | 1 cut(s) | 130 |
| Tru1I | TTAA | 1 cut(s) | 144 |
| Tru9I | TTAA | 1 cut(s) | 144 |
| TseFI | GTSAC | 1 cut(s) | 200 |
| TseI | GCWGC | 2 cut(s) | 85, 258 |
| Tsp45I | GTSAC | 1 cut(s) | 200 |
| TspDTI | ATGAA | 3 cut(s) | 75, 197, 242 |
| TspGWI | ACGGA | 2 cut(s) | 29, 63 |
| ZraI | GACGTC | 1 cut(s) | 200 |