Rmu_co8431815.1_g000001

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8431815.1
Physical Location & Seq
Forward (+)
607 .. 1502
896 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8431815.1_g000001.1.cds

Sequence Viewer

Length: 896 bp
atggaagaaaggagcgtgttgttcggtaaatacgagatgggaaggctactgggcaaaggcaccttcgccaaagtgtactacggcagacaaacagagtccaacgaaagcgtggcgatcaaagtgatcagcaaagaccaggttaagaaggaaggcatgatggagcagatcaagcgcgaaatcgcagtcacccgattagttcgccacccaaacattgtggaactcaaagaggtgatggccaccaagaccaaaatcttcttcgtcatggagtacgtcaagggcggcgagctcttcgccaaagtcgccaagggaaagctcaaggaagatcaagcccgcaaatacttccagcagttgatcagcgccgtcgatttctgccacagcaggggagtctcccatcgcgatttgaagcccgagaatctcctcctcgacgaaaacgaggacctcaagatctctgacttcggcctctcctctctgccggagcagctccgaaacgacggccttttacacacccagtgtggcacccctgcttacgtggcacccgaggtcctccggaagaagggttacgatggttctaaagctgatatatggtcctgcggagtcatactcttcgttctgctggcggggttccttccgtttcaggacgagaacctgatgaagatgtacaggaaggttttcaaagccgaattcgaatgcccgccgtggttttcaaccgaagccaaacgactcgtctccaagttgttggtttccgatcctgagcgccgaatcaccatccctggaatcatgcgcgtgccttggttcagaaaagggtacacgcgccccctggcatttacggcaccccctgaacctggttctgaaaaatccgaagacgattttggttctattgcccctgctgctgctgc

Protein Analysis

299

Amino Acids

33.88

Weight (kDa)

9.05

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 59, 515, 532, 829
AccII CGCG 4 cut(s) 174, 396, 783, 811
AccIII TCCGGA 1 cut(s) 546
AciI CCGC 5 cut(s) 279, 331, 591, 617, 692
AclWI GGATC 1 cut(s) 740
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 1 cut(s) 680
AdeI CACNNNGTG 1 cut(s) 510
AfaI GTAC 4 cut(s) 77, 269, 659, 806
AfiI CCNNNNNNNGG 3 cut(s) 379, 553, 842
AgsI TTSAA 3 cut(s) 403, 673, 705
AjnI CCWGG 4 cut(s) 135, 769, 816, 841
AjuI GAANNNNNNNTTGG 4 cut(s) 239, 271, 852, 884
AluBI AGCT 4 cut(s) 286, 313, 481, 575
AluI AGCT 4 cut(s) 286, 313, 481, 575
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 2 cut(s) 391, 730
AlwI GGATC 1 cut(s) 740
Ama87I CYCGRG 2 cut(s) 407, 536
Aor13HI TCCGGA 1 cut(s) 546
AoxI GGCC 3 cut(s) 234, 457, 493
ApeKI GCWGC 4 cut(s) 478, 887, 890, 893
ApoI RAATTY 1 cut(s) 680
ArsI GACNNNNNNTTYG 4 cut(s) 168, 200, 708, 740
Asp700I GAANNNNTTC 1 cut(s) 668
AspLEI GCGC 5 cut(s) 174, 359, 756, 783, 813
AspS9I GGNCC 3 cut(s) 436, 541, 585
AsuHPI GGTGA 3 cut(s) 178, 241, 754
AsuII TTCGAA 1 cut(s) 684
AvaI CYCGRG 2 cut(s) 407, 536
AvaII GGWCC 3 cut(s) 436, 541, 585
BalI TGGCCA 1 cut(s) 236
BanI GGYRCC 4 cut(s) 59, 515, 532, 829
BanII GRGCYC 1 cut(s) 288
BarI GAAGNNNNNNTAC 2 cut(s) 542, 574
BbsI GAAGAC 1 cut(s) 867
Bbv12I GWGCWC 1 cut(s) 288
BbvI GCAGC 4 cut(s) 490, 874, 877, 880
BccI CCATC 6 cut(s) 31, 151, 226, 399, 557, 773
BceAI ACGGC 5 cut(s) 97, 344, 508, 679, 843
BciT130I CCWGG 4 cut(s) 137, 771, 818, 843
BclI TGATCA 2 cut(s) 123, 351
BcoDI GTCTC 2 cut(s) 391, 730
BfoI RGCGCY 2 cut(s) 360, 757
BglII AGATCT 1 cut(s) 444
BisI GCNGC 5 cut(s) 280, 479, 888, 891, 894
BlsI GCNGC 5 cut(s) 281, 480, 889, 892, 895
Bme1390I CCNGG 4 cut(s) 137, 771, 818, 843
Bme18I GGWCC 3 cut(s) 436, 541, 585
BmeT110I CYCGRG 2 cut(s) 407, 536
BmgT120I GGNCC 3 cut(s) 436, 541, 585
BmiI GGNNCC 5 cut(s) 61, 517, 534, 623, 831
BmrFI CCNGG 4 cut(s) 137, 771, 818, 843
BmrI ACTGGG 2 cut(s) 59, 502
BmuI ACTGGG 2 cut(s) 59, 502
BpiI GAAGAC 1 cut(s) 867
BplI GAGNNNNNCTC 2 cut(s) 585, 617
Bpu10I CCTNAGC 1 cut(s) 750
Bpu14I TTCGAA 1 cut(s) 684
BpuEI CTTGAG 2 cut(s) 299, 425
BsaAI YACGTR 1 cut(s) 529
BsaJI CCNNGG 6 cut(s) 303, 537, 695, 769, 788, 816
BsaWI WCCGGW 1 cut(s) 546
Bsc4I CCNNNNNNNGG 3 cut(s) 379, 553, 842
Bse1I ACTGG 2 cut(s) 54, 508
BseAI TCCGGA 1 cut(s) 546
BseBI CCWGG 4 cut(s) 137, 771, 818, 843
BseDI CCNNGG 6 cut(s) 303, 537, 695, 769, 788, 816
BseGI GGATG 1 cut(s) 765
BseLI CCNNNNNNNGG 3 cut(s) 379, 553, 842
BseMII CTCAG 1 cut(s) 741
BseNI ACTGG 2 cut(s) 54, 508
BseRI GAGGAG 3 cut(s) 407, 410, 454
BseXI GCAGC 4 cut(s) 490, 874, 877, 880
Bsh1236I CGCG 4 cut(s) 174, 396, 783, 811
BshFI GGCC 3 cut(s) 236, 459, 495
BshNI GGYRCC 4 cut(s) 59, 515, 532, 829
BsiHKAI GWGCWC 1 cut(s) 288
BsiHKCI CYCGRG 2 cut(s) 407, 536
BsiSI CCGG 2 cut(s) 473, 547
BslI CCNNNNNNNGG 3 cut(s) 379, 553, 842
BsmAI GTCTC 2 cut(s) 391, 730
BsmBI CGTCTC 1 cut(s) 730
BsmI GAATGC 1 cut(s) 692
BsnI GGCC 3 cut(s) 236, 459, 495
BsoBI CYCGRG 2 cut(s) 407, 536
Bsp119I TTCGAA 1 cut(s) 684
Bsp1286I GDGCHC 1 cut(s) 288
Bsp13I TCCGGA 1 cut(s) 546
Bsp1407I TGTACA 1 cut(s) 657
Bsp143I GATC 7 cut(s) 114, 123, 165, 322, 351, 444, 745
Bsp68I TCGCGA 1 cut(s) 396
BspACI CCGC 5 cut(s) 279, 331, 591, 617, 692
BspANI GGCC 3 cut(s) 236, 459, 495
BspCNI CTCAG 1 cut(s) 742
BspEI TCCGGA 1 cut(s) 546
BspFNI CGCG 4 cut(s) 174, 396, 783, 811
BspLI GGNNCC 5 cut(s) 61, 517, 534, 623, 831
BspPI GGATC 1 cut(s) 740
BspQI GCTCTTC 1 cut(s) 293
BspT104I TTCGAA 1 cut(s) 684
BspT107I GGYRCC 4 cut(s) 59, 515, 532, 829
BsrGI TGTACA 1 cut(s) 657
BsrI ACTGG 2 cut(s) 54, 508
BssECI CCNNGG 6 cut(s) 303, 537, 695, 769, 788, 816
BssMI GATC 7 cut(s) 114, 123, 165, 322, 351, 444, 745
BssT1I CCWWGG 2 cut(s) 303, 788
Bst2UI CCWGG 4 cut(s) 137, 771, 818, 843
Bst6I CTCTTC 2 cut(s) 293, 608
BstAUI TGTACA 1 cut(s) 657
BstBAI YACGTR 1 cut(s) 529
BstBI TTCGAA 1 cut(s) 684
BstC8I GCNNGC 5 cut(s) 284, 331, 615, 692, 785
BstDEI CTNAG 1 cut(s) 750
BstDSI CCRYGG 1 cut(s) 695
BstF5I GGATG 1 cut(s) 765
BstFNI CGCG 4 cut(s) 174, 396, 783, 811
BstH2I RGCGCY 2 cut(s) 360, 757
BstHHI GCGC 5 cut(s) 174, 359, 756, 783, 813
BstKTI GATC 7 cut(s) 117, 126, 168, 325, 354, 447, 748
BstMAI GTCTC 2 cut(s) 391, 730
BstMBI GATC 7 cut(s) 114, 123, 165, 322, 351, 444, 745
BstMWI GCNNNNNNNGC 7 cut(s) 169, 299, 478, 530, 827, 887, 893
BstNI CCWGG 4 cut(s) 137, 771, 818, 843
BstSCI CCNGG 4 cut(s) 135, 769, 816, 841
BstUI CGCG 4 cut(s) 174, 396, 783, 811
BstV1I GCAGC 4 cut(s) 490, 874, 877, 880
BstV2I GAAGAC 1 cut(s) 867
BstX2I RGATCY 1 cut(s) 444
BstXI CCANNNNNNTGG 1 cut(s) 736
BstYI RGATCY 1 cut(s) 444
BsuRI GGCC 3 cut(s) 236, 459, 495
BtgI CCRYGG 1 cut(s) 695
BtgZI GCGATG 1 cut(s) 377
BtsCI GGATG 1 cut(s) 765
BtsIMutI CAGTG 1 cut(s) 515
BtuMI TCGCGA 1 cut(s) 396
Cac8I GCNNGC 5 cut(s) 284, 331, 615, 692, 785
CfoI GCGC 5 cut(s) 174, 359, 756, 783, 813
Cfr13I GGNCC 3 cut(s) 436, 541, 585
CsiI ACCWGGT 2 cut(s) 135, 841
Csp6I GTAC 4 cut(s) 76, 268, 658, 805
CspCI CAANNNNNGTGG 2 cut(s) 195, 230
CviAII CATG 3 cut(s) 154, 262, 778
CviQI GTAC 4 cut(s) 76, 268, 658, 805
DdeI CTNAG 1 cut(s) 750
DpnI GATC 7 cut(s) 116, 125, 167, 324, 353, 446, 747
DpnII GATC 7 cut(s) 114, 123, 165, 322, 351, 444, 745
DraIII CACNNNGTG 1 cut(s) 510
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 2 cut(s) 293, 608
EarI CTCTTC 2 cut(s) 293, 608
Ecl136II GAGCTC 1 cut(s) 286
Eco130I CCWWGG 2 cut(s) 303, 788
Eco24I GRGCYC 1 cut(s) 288
Eco47I GGWCC 3 cut(s) 436, 541, 585
Eco53kI GAGCTC 1 cut(s) 286
Eco88I CYCGRG 2 cut(s) 407, 536
EcoICRI GAGCTC 1 cut(s) 286
EcoO109I RGGNCCY 2 cut(s) 436, 541
EcoRI GAATTC 1 cut(s) 680
EcoRII CCWGG 4 cut(s) 135, 769, 816, 841
EcoT14I CCWWGG 2 cut(s) 303, 788
EcoT38I GRGCYC 1 cut(s) 288
ErhI CCWWGG 2 cut(s) 303, 788
Esp3I CGTCTC 1 cut(s) 730
FaeI CATG 3 cut(s) 157, 265, 781
FaiI YATR 6 cut(s) 155, 263, 581, 583, 599, 779
FatI CATG 3 cut(s) 153, 261, 777
FauI CCCGC 3 cut(s) 338, 610, 699
FbaI TGATCA 2 cut(s) 123, 351
Fnu4HI GCNGC 5 cut(s) 280, 479, 888, 891, 894
FokI GGATG 1 cut(s) 752
FriOI GRGCYC 1 cut(s) 288
Fsp4HI GCNGC 5 cut(s) 280, 479, 888, 891, 894
GlaI GCGC 5 cut(s) 173, 358, 755, 782, 812
GluI GCNGC 5 cut(s) 280, 479, 888, 891, 894
HaeII RGCGCY 2 cut(s) 360, 757
HaeIII GGCC 3 cut(s) 236, 459, 495
HapII CCGG 2 cut(s) 473, 547
HhaI GCGC 5 cut(s) 174, 359, 756, 783, 813
Hin1II CATG 3 cut(s) 157, 265, 781
Hin6I GCGC 5 cut(s) 172, 357, 754, 781, 811
HinP1I GCGC 5 cut(s) 172, 357, 754, 781, 811
HinfI GANTC 7 cut(s) 95, 384, 412, 594, 720, 759, 774
HpaII CCGG 2 cut(s) 473, 547
HphI GGTGA 3 cut(s) 178, 241, 754
Hpy166II GTNNAC 2 cut(s) 76, 807
Hpy188I TCNGA 6 cut(s) 451, 485, 745, 797, 850, 859
Hpy188III TCNNGA 5 cut(s) 395, 442, 547, 635, 749
Hpy8I GTNNAC 2 cut(s) 76, 807
Hpy99I CGWCG 3 cut(s) 365, 428, 494
HpyAV CCTTC 7 cut(s) 36, 73, 139, 143, 547, 635, 658
HpyCH4IV ACGT 2 cut(s) 270, 528
HpyF10VI GCNNNNNNNGC 7 cut(s) 169, 299, 478, 530, 827, 887, 893
HpyF3I CTNAG 1 cut(s) 750
HpySE526I ACGT 2 cut(s) 270, 528
Hsp92II CATG 3 cut(s) 157, 265, 781
HspAI GCGC 5 cut(s) 172, 357, 754, 781, 811
Kpn2I TCCGGA 1 cut(s) 546
Ksp22I TGATCA 2 cut(s) 123, 351
Kzo9I GATC 7 cut(s) 114, 123, 165, 322, 351, 444, 745
LguI GCTCTTC 1 cut(s) 293
LmnI GCTCC 4 cut(s) 12, 160, 475, 486
Lsp1109I GCAGC 4 cut(s) 490, 874, 877, 880
MabI ACCWGGT 2 cut(s) 135, 841
MaeII ACGT 2 cut(s) 270, 528
MaeIII GTNAC 2 cut(s) 184, 557
MalI GATC 7 cut(s) 116, 125, 167, 324, 353, 446, 747
MboI GATC 7 cut(s) 114, 123, 165, 322, 351, 444, 745
MboII GAAGA 9 cut(s) 17, 244, 247, 280, 332, 562, 595, 664, 872
MflI RGATCY 1 cut(s) 444
MhlI GDGCHC 1 cut(s) 288
MlsI TGGCCA 1 cut(s) 236
MluCI AATT 1 cut(s) 680
MluNI TGGCCA 1 cut(s) 236
MlyI GAGTC 4 cut(s) 104, 393, 603, 714
MmeI TCCRAC 1 cut(s) 123
MnlI CCTC 9 cut(s) 220, 427, 428, 431, 449, 470, 475, 532, 554
Mox20I TGGCCA 1 cut(s) 236
MroI TCCGGA 1 cut(s) 546
MroXI GAANNNNTTC 1 cut(s) 668
MscI TGGCCA 1 cut(s) 236
MseI TTAA 1 cut(s) 141
MslI CAYNNNNRTG 1 cut(s) 782
Msp20I TGGCCA 1 cut(s) 236
MspI CCGG 2 cut(s) 473, 547
MspR9I CCNGG 4 cut(s) 137, 771, 818, 843
Mva1269I GAATGC 1 cut(s) 692
MvaI CCWGG 4 cut(s) 137, 771, 818, 843
MvnI CGCG 4 cut(s) 174, 396, 783, 811
MwoI GCNNNNNNNGC 7 cut(s) 169, 299, 478, 530, 827, 887, 893
NdeII GATC 7 cut(s) 114, 123, 165, 322, 351, 444, 745
NlaIII CATG 3 cut(s) 157, 265, 781
NlaIV GGNNCC 5 cut(s) 61, 517, 534, 623, 831
NmuCI GTSAC 1 cut(s) 184
NruI TCGCGA 1 cut(s) 396
NspV TTCGAA 1 cut(s) 684
PciSI GCTCTTC 1 cut(s) 293
PcsI WCGNNNNNNNCGW 3 cut(s) 30, 429, 534
PctI GAATGC 1 cut(s) 692
PdmI GAANNNNTTC 1 cut(s) 668
PfeI GAWTC 3 cut(s) 412, 759, 774
PkrI GCNGC 5 cut(s) 281, 480, 889, 892, 895
PleI GAGTC 4 cut(s) 103, 392, 602, 714
PpsI GAGTC 4 cut(s) 103, 392, 602, 714
Ppu21I YACGTR 1 cut(s) 529
PpuMI RGGWCCY 2 cut(s) 436, 541
Psp124BI GAGCTC 1 cut(s) 288
Psp5II RGGWCCY 2 cut(s) 436, 541
Psp6I CCWGG 4 cut(s) 135, 769, 816, 841
PspGI CCWGG 4 cut(s) 135, 769, 816, 841
PspN4I GGNNCC 5 cut(s) 61, 517, 534, 623, 831
PspPI GGNCC 3 cut(s) 436, 541, 585
PspPPI RGGWCCY 2 cut(s) 436, 541
PsuI RGATCY 1 cut(s) 444
RruI TCGCGA 1 cut(s) 396
RsaI GTAC 4 cut(s) 77, 269, 659, 806
RsaNI GTAC 4 cut(s) 76, 268, 658, 805
RseI CAYNNNNRTG 1 cut(s) 782
SacI GAGCTC 1 cut(s) 288
SapI GCTCTTC 1 cut(s) 293
SaqAI TTAA 1 cut(s) 141
SatI GCNGC 5 cut(s) 280, 479, 888, 891, 894
Sau3AI GATC 7 cut(s) 114, 123, 165, 322, 351, 444, 745
Sau96I GGNCC 3 cut(s) 436, 541, 585
SchI GAGTC 4 cut(s) 104, 393, 603, 714
ScrFI CCNGG 4 cut(s) 137, 771, 818, 843
SduI GDGCHC 1 cut(s) 288
SexAI ACCWGGT 2 cut(s) 135, 841
SfuI TTCGAA 1 cut(s) 684
SinI GGWCC 3 cut(s) 436, 541, 585
SmiMI CAYNNNNRTG 1 cut(s) 782
SmlI CTYRAG 2 cut(s) 314, 440
SmoI CTYRAG 2 cut(s) 314, 440
Sse9I AATT 1 cut(s) 680
SsiI CCGC 5 cut(s) 279, 331, 591, 617, 692
SstI GAGCTC 1 cut(s) 288
StyD4I CCNGG 4 cut(s) 135, 769, 816, 841
StyI CCWWGG 2 cut(s) 303, 788
TaiI ACGT 2 cut(s) 273, 531
TaqI TCGA 3 cut(s) 363, 423, 684
TasI AATT 1 cut(s) 680
TatI WGTACW 2 cut(s) 75, 657
TauI GCSGC 1 cut(s) 282
TfiI GAWTC 3 cut(s) 412, 759, 774
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
TscAI CASTG 1 cut(s) 515
TseFI GTSAC 1 cut(s) 184
TseI GCWGC 4 cut(s) 478, 887, 890, 893
Tsp45I GTSAC 1 cut(s) 184
TspDTI ATGAA 1 cut(s) 665
TspGWI ACGGA 1 cut(s) 618
TspRI CASTG 1 cut(s) 515
VpaK11BI GGWCC 3 cut(s) 436, 541, 585
XapI RAATTY 1 cut(s) 680
XcmI CCANNNNNNNNNTGG 1 cut(s) 106
XmnI GAANNNNTTC 1 cut(s) 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.