Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0006737

Physical Location & Seq

Genomic Coordinates Forward (+)

9444731 .. 9446050

Gene Structure 1320 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00168590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGGAAGAAAGGAGCGTGTTGTTCGGTAAATACGAGATGGGAAGGCTGCTGGGCAAAGGCACCTTCGCCAAAGTGTACTACGGCAGACAAACAGAGTCCAACGAGAGTGTAGCGATCAAAGTGATCAGCAAAGACCAGGTTAAGAAGGAAGGCATGATGGAGCAGATCAAGCGCGAAATCGCAGTCACCCGATTAGTTCGCCACCCAAACATTGTGGAACTCAAAGAGGTGATGGCCACCAAGACCAAAATCTTCTTCGTCATGGAGTACGTCAAGGGCGGCGAGCTCTTCGCTAAAGTCGCCAAGGGAAAGCTCAAGGAAGATCAAGCCCGCAAATACTTCCAGCAGTTGATCAGCGCCGTCGATTTCTGCCACAGCAGGGGAGTCTCCCACCGCGATTTGAAGCCCGAGAATCTCCTCCTCGACGAAAACGAGGACCTCAAGATCTCCGACTTCGGCCTCTCCTCTCTGCCGGAGCAGCTCCGAAACGACGGCCTCTTACACACCCAGTGTGGCACCCCTGCTTACGTGGCACCGGAGGTCCTCCGGAAGAAGGGTTACGATGGTTCTAAAGCTGATATATGGTCCTGCGGAGTCATACTCTTCGTTCTGCTGGCGGGGTTCCTTCCGTTTCAGGACGAGAACCTGATGAAGATGTACAGGAAGGTTTTCAAAGCCGAATTCGAATGCCCGCCGTGGTTTTCAACCGAAGCCAAACGACTCATCTCCAAGTTGTTGGTTTCCGATCCTGAGCGCCGAATCACCATCCCTGGAATCATGCGCGTGCCTTGGTTCAGAAAAGGGTACACGCGCCCCCTGGCGTTTACGGCACCCCCTGAACCTGGTTCTGAAAAATCCGAAGACGATTTTGGTTCTATTGCCCCTGCTGCTGCCAACAAAGCATCGTCGCCCAACTTCTTCAACGCCTTCCAGTTTATCTCATCCATGTCTTCCGGATTCGATTTGTCGAATTTGTTTGAGAGCAAGAGAAAGGCAGCGACCATGTTCACCTCCAAGTGCTCGGCAACTACTATTATGGCCAAGATTGAGCATGCGGCCAAGGGCTTGAGCTTCAAGGTGGGGAACGTCAAGGACTTTAAATTAAGGCTACAAGGCCCAAATGAAGGGAGGAAGGGGAGGCTTTCGGTGACCGCGGAGGTCTTCGAGGTGGCTCCAGAGGTTGCGGTGGTCGAGTTTTCCAAGTCCGCCGGGGATACTTTGGAGTATGTCAAGTTTTGTGAAGAAGATGTTAAGCCAGCGTTGAAAGACATTGTTTGGACATGGCAAGGTGACGGTAACAAAGTCGATGGTGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006814 GO:0006950 GO:0006952 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009651 GO:0009987 GO:0015672 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0030001 GO:0035556 GO:0036211 GO:0042538 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071704 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

439

Amino Acids

49.29

Weight (kDa)

8.85

Isoelectric Point (pI)

34.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	11 - 265	5.6e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	12 - 259	6.1e-39	Protein tyrosine and serine/threonine kinase
NAF	PF03822	304 - 360	6.4e-20	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006737)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10930 AT5G25110
fragaria_vesca	FvH4_2g41050
malus_domestica	MD15G1039300.v1.1 MD17G1222800.v1.1
prunus_persica	Prupe.1G392900_v2.0.a1 Prupe.3G097900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0133031 RchiOBHm_Chr6g0299521
rosa_laevigata	RLG00000011420 RLG00000019304
rosa_multiflora	Rmu_co8431815.1_g000001 Rmu_sc0006821.1_g000008 Rmu_sc0008770.1_g000015
rosa_roxburghii	Rroxscaffold_2G00111560 Rroxscaffold_7G00168590
rosa_rugosa	Rorug02G0309200 Rorug06G0289500
rosa_samantha	Rh2BG367400 Rh2CG344800 Rh2DG384400 Rh6AG400800 Rh6BG409400 Rh6DG401800
rosa_wichuraiana	Rw2G029410 Rw6G035070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	59, 515, 532, 829
AccII	CGCG	5 cut(s)	174, 396, 783, 811, 1154
AccIII	TCCGGA	2 cut(s)	546, 953
AclWI	GGATC	1 cut(s)	740
AcoI	YGGCCR	3 cut(s)	234, 1038, 1056
AcsI	RAATTY	2 cut(s)	680, 970
AdeI	CACNNNGTG	1 cut(s)	510
AfaI	GTAC	4 cut(s)	77, 269, 659, 806
AfiI	CCNNNNNNNGG	4 cut(s)	379, 553, 842, 1124
AgsI	TTSAA	6 cut(s)	403, 673, 705, 922, 1075, 1264
AjnI	CCWGG	4 cut(s)	135, 769, 816, 841
AjuI	GAANNNNNNNTTGG	4 cut(s)	239, 271, 852, 884
AluBI	AGCT	5 cut(s)	286, 313, 481, 575, 1071
AluI	AGCT	5 cut(s)	286, 313, 481, 575, 1071
Alw21I	GWGCWC	2 cut(s)	288, 1022
Alw26I	GTCTC	1 cut(s)	391
AlwI	GGATC	1 cut(s)	740
Ama87I	CYCGRG	1 cut(s)	407
Aor13HI	TCCGGA	2 cut(s)	546, 953
AoxI	GGCC	6 cut(s)	234, 457, 493, 1038, 1056, 1114
ApeKI	GCWGC	5 cut(s)	46, 478, 887, 890, 995
ApoI	RAATTY	2 cut(s)	680, 970
ArsI	GACNNNNNNTTYG	2 cut(s)	168, 200
Asp700I	GAANNNNTTC	1 cut(s)	668
AspLEI	GCGC	5 cut(s)	174, 359, 756, 783, 813
AspS9I	GGNCC	4 cut(s)	436, 541, 585, 1115
AsuC2I	CCSGG	1 cut(s)	1210
AsuHPI	GGTGA	6 cut(s)	178, 241, 754, 1000, 1159, 1301
AsuII	TTCGAA	1 cut(s)	684
AvaI	CYCGRG	1 cut(s)	407
AvaII	GGWCC	3 cut(s)	436, 541, 585
BalI	TGGCCA	2 cut(s)	236, 1040
BanI	GGYRCC	4 cut(s)	59, 515, 532, 829
BanII	GRGCYC	1 cut(s)	288
BarI	GAAGNNNNNNTAC	2 cut(s)	542, 574
BbsI	GAAGAC	3 cut(s)	867, 942, 1153
Bbv12I	GWGCWC	2 cut(s)	288, 1022
BbvI	GCAGC	5 cut(s)	33, 490, 874, 877, 1007
BccI	CCATC	6 cut(s)	31, 151, 226, 557, 773, 1301
BceAI	ACGGC	5 cut(s)	97, 344, 508, 679, 843
BciT130I	CCWGG	4 cut(s)	137, 771, 818, 843
BciVI	GTATCC	1 cut(s)	1207
BclI	TGATCA	2 cut(s)	123, 351
BcnI	CCSGG	1 cut(s)	1210
BcoDI	GTCTC	1 cut(s)	391
BfoI	RGCGCY	2 cut(s)	360, 757
BfuI	GTATCC	1 cut(s)	1207
BglII	AGATCT	1 cut(s)	444
BisI	GCNGC	7 cut(s)	47, 280, 479, 888, 891, 996, 1056
BlsI	GCNGC	7 cut(s)	48, 281, 480, 889, 892, 997, 1057
Bme1390I	CCNGG	5 cut(s)	137, 771, 818, 843, 1210
Bme18I	GGWCC	3 cut(s)	436, 541, 585
BmeT110I	CYCGRG	1 cut(s)	407
BmgT120I	GGNCC	4 cut(s)	436, 541, 585, 1115
BmiI	GGNNCC	6 cut(s)	61, 517, 534, 623, 831, 1173
BmrFI	CCNGG	5 cut(s)	137, 771, 818, 843, 1210
BmrI	ACTGGG	1 cut(s)	502
BmsI	GCATC	1 cut(s)	911
BmuI	ACTGGG	1 cut(s)	502
BpiI	GAAGAC	3 cut(s)	867, 942, 1153
BplI	GAGNNNNNCTC	2 cut(s)	585, 617
BpmI	CTGGAG	1 cut(s)	1158
Bpu10I	CCTNAGC	1 cut(s)	750
Bpu14I	TTCGAA	1 cut(s)	684
BpuEI	CTTGAG	3 cut(s)	299, 425, 1087
BpuMI	CCSGG	1 cut(s)	1210
BsaAI	YACGTR	1 cut(s)	529
BsaJI	CCNNGG	8 cut(s)	303, 695, 769, 788, 816, 1059, 1152, 1209
BsaWI	WCCGGW	3 cut(s)	535, 546, 953
Bsc4I	CCNNNNNNNGG	4 cut(s)	379, 553, 842, 1124
Bse1I	ACTGG	2 cut(s)	508, 931
BseAI	TCCGGA	2 cut(s)	546, 953
BseBI	CCWGG	4 cut(s)	137, 771, 818, 843
BseDI	CCNNGG	8 cut(s)	303, 695, 769, 788, 816, 1059, 1152, 1209
BseGI	GGATG	2 cut(s)	765, 941
BseLI	CCNNNNNNNGG	4 cut(s)	379, 553, 842, 1124
BseMII	CTCAG	1 cut(s)	741
BseNI	ACTGG	2 cut(s)	508, 931
BseRI	GAGGAG	3 cut(s)	407, 410, 454
BseXI	GCAGC	5 cut(s)	33, 490, 874, 877, 1007
BseYI	CCCAGC	1 cut(s)	49
Bsh1236I	CGCG	5 cut(s)	174, 396, 783, 811, 1154
BshFI	GGCC	6 cut(s)	236, 459, 495, 1040, 1058, 1116
BshNI	GGYRCC	4 cut(s)	59, 515, 532, 829
BsiHKAI	GWGCWC	2 cut(s)	288, 1022
BsiHKCI	CYCGRG	1 cut(s)	407
BsiSI	CCGG	5 cut(s)	473, 536, 547, 954, 1209
BslI	CCNNNNNNNGG	4 cut(s)	379, 553, 842, 1124
BsmAI	GTCTC	1 cut(s)	391
BsmI	GAATGC	1 cut(s)	692
BsnI	GGCC	6 cut(s)	236, 459, 495, 1040, 1058, 1116
BsoBI	CYCGRG	1 cut(s)	407
Bsp119I	TTCGAA	1 cut(s)	684
Bsp1286I	GDGCHC	2 cut(s)	288, 1022
Bsp13I	TCCGGA	2 cut(s)	546, 953
Bsp1407I	TGTACA	1 cut(s)	657
Bsp143I	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
BspANI	GGCC	6 cut(s)	236, 459, 495, 1040, 1058, 1116
BspCNI	CTCAG	1 cut(s)	742
BspEI	TCCGGA	2 cut(s)	546, 953
BspFNI	CGCG	5 cut(s)	174, 396, 783, 811, 1154
BspLI	GGNNCC	6 cut(s)	61, 517, 534, 623, 831, 1173
BspPI	GGATC	1 cut(s)	740
BspQI	GCTCTTC	1 cut(s)	293
BspT104I	TTCGAA	1 cut(s)	684
BspT107I	GGYRCC	4 cut(s)	59, 515, 532, 829
BsrGI	TGTACA	1 cut(s)	657
BsrI	ACTGG	2 cut(s)	508, 931
BssECI	CCNNGG	8 cut(s)	303, 695, 769, 788, 816, 1059, 1152, 1209
BssMI	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
BssT1I	CCWWGG	3 cut(s)	303, 788, 1059
Bst2UI	CCWGG	4 cut(s)	137, 771, 818, 843
Bst4CI	ACNGT	1 cut(s)	1295
Bst6I	CTCTTC	2 cut(s)	293, 608
BstAUI	TGTACA	1 cut(s)	657
BstBAI	YACGTR	1 cut(s)	529
BstBI	TTCGAA	1 cut(s)	684
BstC8I	GCNNGC	7 cut(s)	284, 331, 615, 692, 785, 1053, 1257
BstDEI	CTNAG	1 cut(s)	750
BstDSI	CCRYGG	2 cut(s)	695, 1152
BstEII	GGTNACC	1 cut(s)	1147
BstF5I	GGATG	2 cut(s)	765, 941
BstFNI	CGCG	5 cut(s)	174, 396, 783, 811, 1154
BstH2I	RGCGCY	2 cut(s)	360, 757
BstHHI	GCGC	5 cut(s)	174, 359, 756, 783, 813
BstKTI	GATC	7 cut(s)	117, 126, 168, 325, 354, 447, 748
BstMAI	GTCTC	1 cut(s)	391
BstMBI	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
BstMWI	GCNNNNNNNGC	7 cut(s)	169, 299, 478, 530, 827, 887, 899
BstNI	CCWGG	4 cut(s)	137, 771, 818, 843
BstNSI	RCATGY	1 cut(s)	1055
BstPI	GGTNACC	1 cut(s)	1147
BstSCI	CCNGG	5 cut(s)	135, 769, 816, 841, 1208
BstUI	CGCG	5 cut(s)	174, 396, 783, 811, 1154
BstV1I	GCAGC	5 cut(s)	33, 490, 874, 877, 1007
BstV2I	GAAGAC	3 cut(s)	867, 942, 1153
BstX2I	RGATCY	1 cut(s)	444
BstXI	CCANNNNNNTGG	1 cut(s)	736
BstYI	RGATCY	1 cut(s)	444
BsuI	GTATCC	1 cut(s)	1207
BsuRI	GGCC	6 cut(s)	236, 459, 495, 1040, 1058, 1116
BtgI	CCRYGG	2 cut(s)	695, 1152
BtsCI	GGATG	2 cut(s)	765, 941
BtsIMutI	CAGTG	1 cut(s)	515
Cac8I	GCNNGC	7 cut(s)	284, 331, 615, 692, 785, 1053, 1257
CfoI	GCGC	5 cut(s)	174, 359, 756, 783, 813
Cfr13I	GGNCC	4 cut(s)	436, 541, 585, 1115
Cfr42I	CCGCGG	1 cut(s)	1155
CsiI	ACCWGGT	2 cut(s)	135, 841
Csp6I	GTAC	4 cut(s)	76, 268, 658, 805
CspCI	CAANNNNNGTGG	2 cut(s)	195, 230
CviAII	CATG	7 cut(s)	154, 262, 778, 946, 1003, 1052, 1281
CviQI	GTAC	4 cut(s)	76, 268, 658, 805
DdeI	CTNAG	1 cut(s)	750
DpnI	GATC	7 cut(s)	116, 125, 167, 324, 353, 446, 747
DpnII	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
DraI	TTTAAA	1 cut(s)	1099
DraIII	CACNNNGTG	1 cut(s)	510
EaeI	YGGCCR	3 cut(s)	234, 1038, 1056
Eam1104I	CTCTTC	2 cut(s)	293, 608
EarI	CTCTTC	2 cut(s)	293, 608
EciI	GGCGGA	1 cut(s)	1195
Ecl136II	GAGCTC	1 cut(s)	286
Eco130I	CCWWGG	3 cut(s)	303, 788, 1059
Eco24I	GRGCYC	1 cut(s)	288
Eco47I	GGWCC	3 cut(s)	436, 541, 585
Eco53kI	GAGCTC	1 cut(s)	286
Eco88I	CYCGRG	1 cut(s)	407
Eco91I	GGTNACC	1 cut(s)	1147
EcoICRI	GAGCTC	1 cut(s)	286
EcoO109I	RGGNCCY	2 cut(s)	436, 541
EcoO65I	GGTNACC	1 cut(s)	1147
EcoRI	GAATTC	1 cut(s)	680
EcoRII	CCWGG	4 cut(s)	135, 769, 816, 841
EcoT14I	CCWWGG	3 cut(s)	303, 788, 1059
EcoT38I	GRGCYC	1 cut(s)	288
ErhI	CCWWGG	3 cut(s)	303, 788, 1059
FaeI	CATG	7 cut(s)	157, 265, 781, 949, 1006, 1055, 1284
FatI	CATG	7 cut(s)	153, 261, 777, 945, 1002, 1051, 1280
FauI	CCCGC	3 cut(s)	338, 610, 699
FbaI	TGATCA	2 cut(s)	123, 351
Fnu4HI	GCNGC	7 cut(s)	47, 280, 479, 888, 891, 996, 1056
FokI	GGATG	2 cut(s)	752, 928
FriOI	GRGCYC	1 cut(s)	288
Fsp4HI	GCNGC	7 cut(s)	47, 280, 479, 888, 891, 996, 1056
GlaI	GCGC	5 cut(s)	173, 358, 755, 782, 812
GluI	GCNGC	7 cut(s)	47, 280, 479, 888, 891, 996, 1056
GsaI	CCCAGC	1 cut(s)	53
GsuI	CTGGAG	1 cut(s)	1158
HaeII	RGCGCY	2 cut(s)	360, 757
HaeIII	GGCC	6 cut(s)	236, 459, 495, 1040, 1058, 1116
HapII	CCGG	5 cut(s)	473, 536, 547, 954, 1209
HhaI	GCGC	5 cut(s)	174, 359, 756, 783, 813
Hin1II	CATG	7 cut(s)	157, 265, 781, 949, 1006, 1055, 1284
Hin6I	GCGC	5 cut(s)	172, 357, 754, 781, 811
HinP1I	GCGC	5 cut(s)	172, 357, 754, 781, 811
HinfI	GANTC	8 cut(s)	95, 384, 412, 594, 720, 759, 774, 957
HpaII	CCGG	5 cut(s)	473, 536, 547, 954, 1209
HphI	GGTGA	6 cut(s)	178, 241, 754, 1000, 1159, 1301
Hpy166II	GTNNAC	4 cut(s)	76, 807, 825, 1008
Hpy188I	TCNGA	6 cut(s)	451, 485, 745, 797, 850, 859
Hpy188III	TCNNGA	6 cut(s)	442, 547, 635, 749, 954, 1175
Hpy8I	GTNNAC	4 cut(s)	76, 807, 825, 1008
Hpy99I	CGWCG	4 cut(s)	365, 428, 494, 910
HpyCH4III	ACNGT	1 cut(s)	1295
HpyCH4IV	ACGT	3 cut(s)	270, 528, 1086
HpyF10VI	GCNNNNNNNGC	7 cut(s)	169, 299, 478, 530, 827, 887, 899
HpyF3I	CTNAG	1 cut(s)	750
HpySE526I	ACGT	3 cut(s)	270, 528, 1086
Hsp92II	CATG	7 cut(s)	157, 265, 781, 949, 1006, 1055, 1284
HspAI	GCGC	5 cut(s)	172, 357, 754, 781, 811
Kpn2I	TCCGGA	2 cut(s)	546, 953
Ksp22I	TGATCA	2 cut(s)	123, 351
KspI	CCGCGG	1 cut(s)	1155
Kzo9I	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
LguI	GCTCTTC	1 cut(s)	293
LmnI	GCTCC	5 cut(s)	12, 160, 475, 486, 1177
Lsp1109I	GCAGC	5 cut(s)	33, 490, 874, 877, 1007
LweI	GCATC	1 cut(s)	911
MabI	ACCWGGT	2 cut(s)	135, 841
MaeII	ACGT	3 cut(s)	270, 528, 1086
MaeIII	GTNAC	5 cut(s)	184, 557, 1147, 1289, 1295
MalI	GATC	7 cut(s)	116, 125, 167, 324, 353, 446, 747
MboI	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
MflI	RGATCY	1 cut(s)	444
MhlI	GDGCHC	2 cut(s)	288, 1022
MlsI	TGGCCA	2 cut(s)	236, 1040
MluCI	AATT	3 cut(s)	680, 970, 1100
MluNI	TGGCCA	2 cut(s)	236, 1040
MlyI	GAGTC	4 cut(s)	104, 393, 603, 714
MmeI	TCCRAC	2 cut(s)	123, 474
Mox20I	TGGCCA	2 cut(s)	236, 1040
MroI	TCCGGA	2 cut(s)	546, 953
MroXI	GAANNNNTTC	1 cut(s)	668
MscI	TGGCCA	2 cut(s)	236, 1040
MseI	TTAA	4 cut(s)	141, 1098, 1103, 1251
MslI	CAYNNNNRTG	1 cut(s)	782
Msp20I	TGGCCA	2 cut(s)	236, 1040
MspA1I	CMGCKG	1 cut(s)	1154
MspI	CCGG	5 cut(s)	473, 536, 547, 954, 1209
MspR9I	CCNGG	5 cut(s)	137, 771, 818, 843, 1210
Mva1269I	GAATGC	1 cut(s)	692
MvaI	CCWGG	4 cut(s)	137, 771, 818, 843
MvnI	CGCG	5 cut(s)	174, 396, 783, 811, 1154
MwoI	GCNNNNNNNGC	7 cut(s)	169, 299, 478, 530, 827, 887, 899
NciI	CCSGG	1 cut(s)	1210
NdeII	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
NlaIII	CATG	7 cut(s)	157, 265, 781, 949, 1006, 1055, 1284
NlaIV	GGNNCC	6 cut(s)	61, 517, 534, 623, 831, 1173
NmeAIII	GCCGAG	1 cut(s)	1001
NmuCI	GTSAC	3 cut(s)	184, 1147, 1289
NspI	RCATGY	1 cut(s)	1055
NspV	TTCGAA	1 cut(s)	684
PaeI	GCATGC	1 cut(s)	1055
PciSI	GCTCTTC	1 cut(s)	293
PcsI	WCGNNNNNNNCGW	2 cut(s)	30, 429
PctI	GAATGC	1 cut(s)	692
PdmI	GAANNNNTTC	1 cut(s)	668
PfeI	GAWTC	4 cut(s)	412, 759, 774, 957
PkrI	GCNGC	7 cut(s)	48, 281, 480, 889, 892, 997, 1057
PleI	GAGTC	4 cut(s)	103, 392, 602, 714
PpsI	GAGTC	4 cut(s)	103, 392, 602, 714
Ppu21I	YACGTR	1 cut(s)	529
PpuMI	RGGWCCY	2 cut(s)	436, 541
Psp124BI	GAGCTC	1 cut(s)	288
Psp5II	RGGWCCY	2 cut(s)	436, 541
Psp6I	CCWGG	4 cut(s)	135, 769, 816, 841
PspEI	GGTNACC	1 cut(s)	1147
PspFI	CCCAGC	1 cut(s)	49
PspGI	CCWGG	4 cut(s)	135, 769, 816, 841
PspN4I	GGNNCC	6 cut(s)	61, 517, 534, 623, 831, 1173
PspPI	GGNCC	4 cut(s)	436, 541, 585, 1115
PspPPI	RGGWCCY	2 cut(s)	436, 541
PsuI	RGATCY	1 cut(s)	444
RsaI	GTAC	4 cut(s)	77, 269, 659, 806
RsaNI	GTAC	4 cut(s)	76, 268, 658, 805
RseI	CAYNNNNRTG	1 cut(s)	782
SacI	GAGCTC	1 cut(s)	288
SacII	CCGCGG	1 cut(s)	1155
SapI	GCTCTTC	1 cut(s)	293
SaqAI	TTAA	4 cut(s)	141, 1098, 1103, 1251
SatI	GCNGC	7 cut(s)	47, 280, 479, 888, 891, 996, 1056
Sau3AI	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
Sau96I	GGNCC	4 cut(s)	436, 541, 585, 1115
SchI	GAGTC	4 cut(s)	104, 393, 603, 714
ScrFI	CCNGG	5 cut(s)	137, 771, 818, 843, 1210
SduI	GDGCHC	2 cut(s)	288, 1022
SexAI	ACCWGGT	2 cut(s)	135, 841
SfaNI	GCATC	1 cut(s)	911
Sfr303I	CCGCGG	1 cut(s)	1155
SfuI	TTCGAA	1 cut(s)	684
SgrBI	CCGCGG	1 cut(s)	1155
SinI	GGWCC	3 cut(s)	436, 541, 585
SmiMI	CAYNNNNRTG	1 cut(s)	782
SmlI	CTYRAG	3 cut(s)	314, 440, 1066
SmoI	CTYRAG	3 cut(s)	314, 440, 1066
SphI	GCATGC	1 cut(s)	1055
Sse9I	AATT	3 cut(s)	680, 970, 1100
SstI	GAGCTC	1 cut(s)	288
StyD4I	CCNGG	5 cut(s)	135, 769, 816, 841, 1208
StyI	CCWWGG	3 cut(s)	303, 788, 1059
TaaI	ACNGT	1 cut(s)	1295
TaiI	ACGT	3 cut(s)	273, 531, 1089
TaqI	TCGA	8 cut(s)	363, 423, 684, 960, 968, 1164, 1191, 1305
TasI	AATT	3 cut(s)	680, 970, 1100
TatI	WGTACW	2 cut(s)	75, 657
TauI	GCSGC	2 cut(s)	282, 1058
TfiI	GAWTC	4 cut(s)	412, 759, 774, 957
Tru1I	TTAA	4 cut(s)	141, 1098, 1103, 1251
Tru9I	TTAA	4 cut(s)	141, 1098, 1103, 1251
TscAI	CASTG	1 cut(s)	515
TseFI	GTSAC	3 cut(s)	184, 1147, 1289
TseI	GCWGC	5 cut(s)	46, 478, 887, 890, 995
Tsp45I	GTSAC	3 cut(s)	184, 1147, 1289
TspDTI	ATGAA	2 cut(s)	665, 1137
TspGWI	ACGGA	1 cut(s)	618
TspRI	CASTG	1 cut(s)	515
VpaK11BI	GGWCC	3 cut(s)	436, 541, 585
XapI	RAATTY	2 cut(s)	680, 970
XceI	RCATGY	1 cut(s)	1055
XmnI	GAANNNNTTC	1 cut(s)	668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.