Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0006737

Physical Location & Seq

Genomic Coordinates Reverse (-)

59053038 .. 59055768

Gene Structure 2731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG401800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGGAAGAAAGGAGCGTGTTGTTCGGTAAATACGAGATGGGAAGGCTGCTGGGCAAAGGCACCTTCGCCAAAGTGTACTACGGCAGACAAACAGAGTCCAACGAAAGCGTGGCGATCAAAGTGATCAGCAAAGACCAGGTTAAGAAGGAAGGCATGATGGAGCAGATCAAGCGCGAAATCGCAGTCACCCGATTAGTTCGCCACCCAAACATTGTGGAACTCAAAGAGGTGATGGCCACCAAGACCAAAATCTTCTTCGTCATGGAGTACGTCAAGGGCGGCGAGCTCTTCGCTAAAGTCGCCAAAGGAAAGCTCAAGGAAGATCAAGCCCGCAAATACTTCCAGCAGTTGATCAGCGCCGTCGATTTCTGCCACAGCAGGGGAGTCTCCCACCGCGATTTGAAGCCCGAGAATCTCCTCCTCGACGAAAACGAGGACCTCAAGATCTCTGACTTCGGCCTCTCCTCTCTGCCGGAGCAGCTCCGAAACGACGGCCTTTTACACACCCAGTGTGGTACCCCTGCTTACGTGGCACCCGAGGTCCTCCGGAAGAAGGGTTACGATGGTTCTAAAGCTGATATATGGTCCTGCGGAGTCATACTCTTCGTTCTGCTGGCGGGGTTCCTTCCGTTTCAGGACGAGAACCTGATGAAGATGTACAGGAAGGTTTTCAAAGCCGAATTCGAATGCCCACCGTGGTTTTCAACCGAAGCCAAACGACTCATCTCCAAGTTGTTGGTTTCCGATCCTGAGCGCCGAATCACCATCCCTGGAATCATGCGCGTGCCTTGGTTCAGAAAAGGGTACACGCGCCCCCTGGCGTTTACGGCACCCCCTGAACCTGGTTCTGAAAAATCCGAAGACGATTTTGGTTCTATTGCCCCTGCTGCTGCTGCCAACAAAGCGTCGTCGCCCAACTTCTTCAACGCCTTCCAGTTTATCTCATCCATGTCTTCCGGATTCGATTTGTCGAATTTGTTTGAGAGCAAGAGAAGGGCAGCGACCATGTTCACCTCCAAGTGCTCGGCAACTGCTATTATGGCCAAGATTGAGCATGCGGCCAAGGGCTTGAGCTTCAAGGTGGGGAACGTCAAGGACTTTAAATTAAGGCTACAAGGCCCAAATGAAGGGAGGAAAGGGAGGCTTTCGGTGACCGCGGAGGTCTTCGAGGTGGCTCCAGAGGTTGCGGTGGTCGAGTTTTCCAAGTCCGCCGGGGATACTTTGGAGTATGTCAAGTTTTGTGAAGAAGATGTTAGGCCAGCGTTGAAAGACATTGTTTGGACATGGCAAGGTGACGGTAACAAAGTCGATGGTGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006814 GO:0006950 GO:0006952 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009651 GO:0009987 GO:0015672 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0030001 GO:0035556 GO:0036211 GO:0042538 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071704 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

440

Amino Acids

49.39

Weight (kDa)

8.86

Isoelectric Point (pI)

35.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	11 - 265	5.6e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	12 - 259	6.1e-39	Protein tyrosine and serine/threonine kinase
NAF	PF03822	305 - 361	6.5e-20	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006737)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10930 AT5G25110
fragaria_vesca	FvH4_2g41050
malus_domestica	MD15G1039300.v1.1 MD17G1222800.v1.1
prunus_persica	Prupe.1G392900_v2.0.a1 Prupe.3G097900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0133031 RchiOBHm_Chr6g0299521
rosa_laevigata	RLG00000011420 RLG00000019304
rosa_multiflora	Rmu_co8431815.1_g000001 Rmu_sc0006821.1_g000008 Rmu_sc0008770.1_g000015
rosa_roxburghii	Rroxscaffold_2G00111560 Rroxscaffold_7G00168590
rosa_rugosa	Rorug02G0309200 Rorug06G0289500
rosa_samantha	Rh2BG367400 Rh2CG344800 Rh2DG384400 Rh6AG400800 Rh6BG409400 Rh6DG401800
rosa_wichuraiana	Rw2G029410 Rw6G035070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	515
AccB1I	GGYRCC	4 cut(s)	59, 515, 532, 829
AccII	CGCG	5 cut(s)	174, 396, 783, 811, 1157
AccIII	TCCGGA	2 cut(s)	546, 956
AclWI	GGATC	1 cut(s)	740
AcoI	YGGCCR	3 cut(s)	234, 1041, 1059
AcsI	RAATTY	2 cut(s)	680, 973
AdeI	CACNNNGTG	1 cut(s)	510
AfaI	GTAC	5 cut(s)	77, 269, 517, 659, 806
AfiI	CCNNNNNNNGG	4 cut(s)	379, 553, 842, 1127
AgsI	TTSAA	6 cut(s)	403, 673, 705, 925, 1078, 1267
AjnI	CCWGG	4 cut(s)	135, 769, 816, 841
AjuI	GAANNNNNNNTTGG	4 cut(s)	239, 271, 852, 884
AluBI	AGCT	5 cut(s)	286, 313, 481, 575, 1074
AluI	AGCT	5 cut(s)	286, 313, 481, 575, 1074
Alw21I	GWGCWC	2 cut(s)	288, 1025
Alw26I	GTCTC	1 cut(s)	391
AlwI	GGATC	1 cut(s)	740
Ama87I	CYCGRG	2 cut(s)	407, 536
Aor13HI	TCCGGA	2 cut(s)	546, 956
AoxI	GGCC	7 cut(s)	234, 457, 493, 1041, 1059, 1117, 1256
ApeKI	GCWGC	6 cut(s)	46, 478, 887, 890, 893, 998
ApoI	RAATTY	2 cut(s)	680, 973
ArsI	GACNNNNNNTTYG	2 cut(s)	168, 200
Asp700I	GAANNNNTTC	1 cut(s)	668
Asp718I	GGTACC	1 cut(s)	515
AspLEI	GCGC	5 cut(s)	174, 359, 756, 783, 813
AspS9I	GGNCC	4 cut(s)	436, 541, 585, 1118
AsuC2I	CCSGG	1 cut(s)	1213
AsuHPI	GGTGA	6 cut(s)	178, 241, 754, 1003, 1162, 1304
AsuII	TTCGAA	1 cut(s)	684
AvaI	CYCGRG	2 cut(s)	407, 536
AvaII	GGWCC	3 cut(s)	436, 541, 585
BalI	TGGCCA	2 cut(s)	236, 1043
BanI	GGYRCC	4 cut(s)	59, 515, 532, 829
BanII	GRGCYC	1 cut(s)	288
BarI	GAAGNNNNNNTAC	2 cut(s)	542, 574
BbsI	GAAGAC	3 cut(s)	867, 945, 1156
Bbv12I	GWGCWC	2 cut(s)	288, 1025
BbvI	GCAGC	6 cut(s)	33, 490, 874, 877, 880, 1010
BccI	CCATC	6 cut(s)	31, 151, 226, 557, 773, 1304
BceAI	ACGGC	4 cut(s)	97, 344, 508, 843
BciT130I	CCWGG	4 cut(s)	137, 771, 818, 843
BciVI	GTATCC	1 cut(s)	1210
BclI	TGATCA	2 cut(s)	123, 351
BcnI	CCSGG	1 cut(s)	1213
BcoDI	GTCTC	1 cut(s)	391
BfoI	RGCGCY	2 cut(s)	360, 757
BfuI	GTATCC	1 cut(s)	1210
BglII	AGATCT	1 cut(s)	444
BisI	GCNGC	8 cut(s)	47, 280, 479, 888, 891, 894, 999, 1059
BlsI	GCNGC	8 cut(s)	48, 281, 480, 889, 892, 895, 1000, 1060
Bme1390I	CCNGG	5 cut(s)	137, 771, 818, 843, 1213
Bme18I	GGWCC	3 cut(s)	436, 541, 585
BmeT110I	CYCGRG	2 cut(s)	407, 536
BmgT120I	GGNCC	4 cut(s)	436, 541, 585, 1118
BmiI	GGNNCC	6 cut(s)	61, 517, 534, 623, 831, 1176
BmrFI	CCNGG	5 cut(s)	137, 771, 818, 843, 1213
BmrI	ACTGGG	1 cut(s)	502
BmuI	ACTGGG	1 cut(s)	502
BpiI	GAAGAC	3 cut(s)	867, 945, 1156
BplI	GAGNNNNNCTC	2 cut(s)	585, 617
BpmI	CTGGAG	1 cut(s)	1161
Bpu10I	CCTNAGC	1 cut(s)	750
Bpu14I	TTCGAA	1 cut(s)	684
BpuEI	CTTGAG	3 cut(s)	299, 425, 1090
BpuMI	CCSGG	1 cut(s)	1213
BsaAI	YACGTR	1 cut(s)	529
BsaJI	CCNNGG	8 cut(s)	537, 695, 769, 788, 816, 1062, 1155, 1212
BsaWI	WCCGGW	2 cut(s)	546, 956
Bsc4I	CCNNNNNNNGG	4 cut(s)	379, 553, 842, 1127
Bse1I	ACTGG	2 cut(s)	508, 934
BseAI	TCCGGA	2 cut(s)	546, 956
BseBI	CCWGG	4 cut(s)	137, 771, 818, 843
BseDI	CCNNGG	8 cut(s)	537, 695, 769, 788, 816, 1062, 1155, 1212
BseGI	GGATG	2 cut(s)	765, 944
BseLI	CCNNNNNNNGG	4 cut(s)	379, 553, 842, 1127
BseMII	CTCAG	1 cut(s)	741
BseNI	ACTGG	2 cut(s)	508, 934
BseRI	GAGGAG	3 cut(s)	407, 410, 454
BseXI	GCAGC	6 cut(s)	33, 490, 874, 877, 880, 1010
BseYI	CCCAGC	1 cut(s)	49
Bsh1236I	CGCG	5 cut(s)	174, 396, 783, 811, 1157
BshFI	GGCC	7 cut(s)	236, 459, 495, 1043, 1061, 1119, 1258
BshNI	GGYRCC	4 cut(s)	59, 515, 532, 829
BsiHKAI	GWGCWC	2 cut(s)	288, 1025
BsiHKCI	CYCGRG	2 cut(s)	407, 536
BsiSI	CCGG	4 cut(s)	473, 547, 957, 1212
BslI	CCNNNNNNNGG	4 cut(s)	379, 553, 842, 1127
BsmAI	GTCTC	1 cut(s)	391
BsmI	GAATGC	1 cut(s)	692
BsnI	GGCC	7 cut(s)	236, 459, 495, 1043, 1061, 1119, 1258
BsoBI	CYCGRG	2 cut(s)	407, 536
Bsp119I	TTCGAA	1 cut(s)	684
Bsp1286I	GDGCHC	2 cut(s)	288, 1025
Bsp13I	TCCGGA	2 cut(s)	546, 956
Bsp1407I	TGTACA	1 cut(s)	657
Bsp143I	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
BspANI	GGCC	7 cut(s)	236, 459, 495, 1043, 1061, 1119, 1258
BspCNI	CTCAG	1 cut(s)	742
BspEI	TCCGGA	2 cut(s)	546, 956
BspFNI	CGCG	5 cut(s)	174, 396, 783, 811, 1157
BspLI	GGNNCC	6 cut(s)	61, 517, 534, 623, 831, 1176
BspPI	GGATC	1 cut(s)	740
BspQI	GCTCTTC	1 cut(s)	293
BspT104I	TTCGAA	1 cut(s)	684
BspT107I	GGYRCC	4 cut(s)	59, 515, 532, 829
BsrGI	TGTACA	1 cut(s)	657
BsrI	ACTGG	2 cut(s)	508, 934
BssECI	CCNNGG	8 cut(s)	537, 695, 769, 788, 816, 1062, 1155, 1212
BssMI	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
BssT1I	CCWWGG	2 cut(s)	788, 1062
Bst2UI	CCWGG	4 cut(s)	137, 771, 818, 843
Bst4CI	ACNGT	2 cut(s)	696, 1298
Bst6I	CTCTTC	2 cut(s)	293, 608
BstAUI	TGTACA	1 cut(s)	657
BstBAI	YACGTR	1 cut(s)	529
BstBI	TTCGAA	1 cut(s)	684
BstC8I	GCNNGC	6 cut(s)	284, 331, 615, 785, 1056, 1260
BstDEI	CTNAG	1 cut(s)	750
BstDSI	CCRYGG	2 cut(s)	695, 1155
BstEII	GGTNACC	1 cut(s)	1150
BstF5I	GGATG	2 cut(s)	765, 944
BstFNI	CGCG	5 cut(s)	174, 396, 783, 811, 1157
BstH2I	RGCGCY	2 cut(s)	360, 757
BstHHI	GCGC	5 cut(s)	174, 359, 756, 783, 813
BstKTI	GATC	7 cut(s)	117, 126, 168, 325, 354, 447, 748
BstMAI	GTCTC	1 cut(s)	391
BstMBI	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
BstMWI	GCNNNNNNNGC	9 cut(s)	169, 299, 478, 530, 827, 887, 893, 902, 1040
BstNI	CCWGG	4 cut(s)	137, 771, 818, 843
BstNSI	RCATGY	1 cut(s)	1058
BstPI	GGTNACC	1 cut(s)	1150
BstSCI	CCNGG	5 cut(s)	135, 769, 816, 841, 1211
BstUI	CGCG	5 cut(s)	174, 396, 783, 811, 1157
BstV1I	GCAGC	6 cut(s)	33, 490, 874, 877, 880, 1010
BstV2I	GAAGAC	3 cut(s)	867, 945, 1156
BstX2I	RGATCY	1 cut(s)	444
BstXI	CCANNNNNNTGG	1 cut(s)	736
BstYI	RGATCY	1 cut(s)	444
BsuI	GTATCC	1 cut(s)	1210
BsuRI	GGCC	7 cut(s)	236, 459, 495, 1043, 1061, 1119, 1258
BtgI	CCRYGG	2 cut(s)	695, 1155
BtsCI	GGATG	2 cut(s)	765, 944
BtsIMutI	CAGTG	1 cut(s)	515
Cac8I	GCNNGC	6 cut(s)	284, 331, 615, 785, 1056, 1260
CfoI	GCGC	5 cut(s)	174, 359, 756, 783, 813
Cfr13I	GGNCC	4 cut(s)	436, 541, 585, 1118
Cfr42I	CCGCGG	1 cut(s)	1158
CseI	GACGC	1 cut(s)	894
CsiI	ACCWGGT	2 cut(s)	135, 841
Csp6I	GTAC	5 cut(s)	76, 268, 516, 658, 805
CspCI	CAANNNNNGTGG	2 cut(s)	195, 230
CviAII	CATG	7 cut(s)	154, 262, 778, 949, 1006, 1055, 1284
CviQI	GTAC	5 cut(s)	76, 268, 516, 658, 805
DdeI	CTNAG	1 cut(s)	750
DpnI	GATC	7 cut(s)	116, 125, 167, 324, 353, 446, 747
DpnII	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
DraI	TTTAAA	1 cut(s)	1102
DraIII	CACNNNGTG	1 cut(s)	510
EaeI	YGGCCR	3 cut(s)	234, 1041, 1059
Eam1104I	CTCTTC	2 cut(s)	293, 608
EarI	CTCTTC	2 cut(s)	293, 608
EciI	GGCGGA	1 cut(s)	1198
Ecl136II	GAGCTC	1 cut(s)	286
Eco130I	CCWWGG	2 cut(s)	788, 1062
Eco24I	GRGCYC	1 cut(s)	288
Eco47I	GGWCC	3 cut(s)	436, 541, 585
Eco53kI	GAGCTC	1 cut(s)	286
Eco88I	CYCGRG	2 cut(s)	407, 536
Eco91I	GGTNACC	1 cut(s)	1150
EcoICRI	GAGCTC	1 cut(s)	286
EcoO109I	RGGNCCY	2 cut(s)	436, 541
EcoO65I	GGTNACC	1 cut(s)	1150
EcoRI	GAATTC	1 cut(s)	680
EcoRII	CCWGG	4 cut(s)	135, 769, 816, 841
EcoT14I	CCWWGG	2 cut(s)	788, 1062
EcoT38I	GRGCYC	1 cut(s)	288
ErhI	CCWWGG	2 cut(s)	788, 1062
FaeI	CATG	7 cut(s)	157, 265, 781, 952, 1009, 1058, 1287
FalI	AAGNNNNNCTT	2 cut(s)	1128, 1160
FatI	CATG	7 cut(s)	153, 261, 777, 948, 1005, 1054, 1283
FauI	CCCGC	2 cut(s)	338, 610
FbaI	TGATCA	2 cut(s)	123, 351
Fnu4HI	GCNGC	8 cut(s)	47, 280, 479, 888, 891, 894, 999, 1059
FokI	GGATG	2 cut(s)	752, 931
FriOI	GRGCYC	1 cut(s)	288
Fsp4HI	GCNGC	8 cut(s)	47, 280, 479, 888, 891, 894, 999, 1059
GlaI	GCGC	5 cut(s)	173, 358, 755, 782, 812
GluI	GCNGC	8 cut(s)	47, 280, 479, 888, 891, 894, 999, 1059
GsaI	CCCAGC	1 cut(s)	53
GsuI	CTGGAG	1 cut(s)	1161
HaeII	RGCGCY	2 cut(s)	360, 757
HaeIII	GGCC	7 cut(s)	236, 459, 495, 1043, 1061, 1119, 1258
HapII	CCGG	4 cut(s)	473, 547, 957, 1212
HgaI	GACGC	1 cut(s)	894
HhaI	GCGC	5 cut(s)	174, 359, 756, 783, 813
Hin1II	CATG	7 cut(s)	157, 265, 781, 952, 1009, 1058, 1287
Hin6I	GCGC	5 cut(s)	172, 357, 754, 781, 811
HinP1I	GCGC	5 cut(s)	172, 357, 754, 781, 811
HinfI	GANTC	8 cut(s)	95, 384, 412, 594, 720, 759, 774, 960
HpaII	CCGG	4 cut(s)	473, 547, 957, 1212
HphI	GGTGA	6 cut(s)	178, 241, 754, 1003, 1162, 1304
Hpy166II	GTNNAC	4 cut(s)	76, 807, 825, 1011
Hpy188I	TCNGA	6 cut(s)	451, 485, 745, 797, 850, 859
Hpy188III	TCNNGA	6 cut(s)	442, 547, 635, 749, 957, 1178
Hpy8I	GTNNAC	4 cut(s)	76, 807, 825, 1011
Hpy99I	CGWCG	5 cut(s)	365, 428, 494, 910, 913
HpyCH4III	ACNGT	2 cut(s)	696, 1298
HpyCH4IV	ACGT	3 cut(s)	270, 528, 1089
HpyF10VI	GCNNNNNNNGC	9 cut(s)	169, 299, 478, 530, 827, 887, 893, 902, 1040
HpyF3I	CTNAG	1 cut(s)	750
HpySE526I	ACGT	3 cut(s)	270, 528, 1089
Hsp92II	CATG	7 cut(s)	157, 265, 781, 952, 1009, 1058, 1287
HspAI	GCGC	5 cut(s)	172, 357, 754, 781, 811
Kpn2I	TCCGGA	2 cut(s)	546, 956
KpnI	GGTACC	1 cut(s)	519
Ksp22I	TGATCA	2 cut(s)	123, 351
KspI	CCGCGG	1 cut(s)	1158
Kzo9I	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
LguI	GCTCTTC	1 cut(s)	293
LmnI	GCTCC	5 cut(s)	12, 160, 475, 486, 1180
Lsp1109I	GCAGC	6 cut(s)	33, 490, 874, 877, 880, 1010
MabI	ACCWGGT	2 cut(s)	135, 841
MaeII	ACGT	3 cut(s)	270, 528, 1089
MaeIII	GTNAC	5 cut(s)	184, 557, 1150, 1292, 1298
MalI	GATC	7 cut(s)	116, 125, 167, 324, 353, 446, 747
MboI	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
MflI	RGATCY	1 cut(s)	444
MhlI	GDGCHC	2 cut(s)	288, 1025
MlsI	TGGCCA	2 cut(s)	236, 1043
MluCI	AATT	3 cut(s)	680, 973, 1103
MluNI	TGGCCA	2 cut(s)	236, 1043
MlyI	GAGTC	4 cut(s)	104, 393, 603, 714
MmeI	TCCRAC	1 cut(s)	123
Mox20I	TGGCCA	2 cut(s)	236, 1043
MroI	TCCGGA	2 cut(s)	546, 956
MroXI	GAANNNNTTC	1 cut(s)	668
MscI	TGGCCA	2 cut(s)	236, 1043
MseI	TTAA	3 cut(s)	141, 1101, 1106
MslI	CAYNNNNRTG	1 cut(s)	782
Msp20I	TGGCCA	2 cut(s)	236, 1043
MspA1I	CMGCKG	1 cut(s)	1157
MspI	CCGG	4 cut(s)	473, 547, 957, 1212
MspR9I	CCNGG	5 cut(s)	137, 771, 818, 843, 1213
Mva1269I	GAATGC	1 cut(s)	692
MvaI	CCWGG	4 cut(s)	137, 771, 818, 843
MvnI	CGCG	5 cut(s)	174, 396, 783, 811, 1157
MwoI	GCNNNNNNNGC	9 cut(s)	169, 299, 478, 530, 827, 887, 893, 902, 1040
NciI	CCSGG	1 cut(s)	1213
NdeII	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
NlaIII	CATG	7 cut(s)	157, 265, 781, 952, 1009, 1058, 1287
NlaIV	GGNNCC	6 cut(s)	61, 517, 534, 623, 831, 1176
NmeAIII	GCCGAG	1 cut(s)	1004
NmuCI	GTSAC	3 cut(s)	184, 1150, 1292
NspI	RCATGY	1 cut(s)	1058
NspV	TTCGAA	1 cut(s)	684
PaeI	GCATGC	1 cut(s)	1058
PciSI	GCTCTTC	1 cut(s)	293
PcsI	WCGNNNNNNNCGW	3 cut(s)	30, 429, 534
PctI	GAATGC	1 cut(s)	692
PdmI	GAANNNNTTC	1 cut(s)	668
PfeI	GAWTC	4 cut(s)	412, 759, 774, 960
PkrI	GCNGC	8 cut(s)	48, 281, 480, 889, 892, 895, 1000, 1060
PleI	GAGTC	4 cut(s)	103, 392, 602, 714
PpsI	GAGTC	4 cut(s)	103, 392, 602, 714
Ppu21I	YACGTR	1 cut(s)	529
PpuMI	RGGWCCY	2 cut(s)	436, 541
Psp124BI	GAGCTC	1 cut(s)	288
Psp5II	RGGWCCY	2 cut(s)	436, 541
Psp6I	CCWGG	4 cut(s)	135, 769, 816, 841
PspEI	GGTNACC	1 cut(s)	1150
PspFI	CCCAGC	1 cut(s)	49
PspGI	CCWGG	4 cut(s)	135, 769, 816, 841
PspN4I	GGNNCC	6 cut(s)	61, 517, 534, 623, 831, 1176
PspPI	GGNCC	4 cut(s)	436, 541, 585, 1118
PspPPI	RGGWCCY	2 cut(s)	436, 541
PsuI	RGATCY	1 cut(s)	444
RsaI	GTAC	5 cut(s)	77, 269, 517, 659, 806
RsaNI	GTAC	5 cut(s)	76, 268, 516, 658, 805
RseI	CAYNNNNRTG	1 cut(s)	782
SacI	GAGCTC	1 cut(s)	288
SacII	CCGCGG	1 cut(s)	1158
SapI	GCTCTTC	1 cut(s)	293
SaqAI	TTAA	3 cut(s)	141, 1101, 1106
SatI	GCNGC	8 cut(s)	47, 280, 479, 888, 891, 894, 999, 1059
Sau3AI	GATC	7 cut(s)	114, 123, 165, 322, 351, 444, 745
Sau96I	GGNCC	4 cut(s)	436, 541, 585, 1118
SchI	GAGTC	4 cut(s)	104, 393, 603, 714
ScrFI	CCNGG	5 cut(s)	137, 771, 818, 843, 1213
SduI	GDGCHC	2 cut(s)	288, 1025
SexAI	ACCWGGT	2 cut(s)	135, 841
Sfr303I	CCGCGG	1 cut(s)	1158
SfuI	TTCGAA	1 cut(s)	684
SgrBI	CCGCGG	1 cut(s)	1158
SinI	GGWCC	3 cut(s)	436, 541, 585
SmiMI	CAYNNNNRTG	1 cut(s)	782
SmlI	CTYRAG	3 cut(s)	314, 440, 1069
SmoI	CTYRAG	3 cut(s)	314, 440, 1069
SphI	GCATGC	1 cut(s)	1058
Sse9I	AATT	3 cut(s)	680, 973, 1103
SstI	GAGCTC	1 cut(s)	288
StyD4I	CCNGG	5 cut(s)	135, 769, 816, 841, 1211
StyI	CCWWGG	2 cut(s)	788, 1062
TaaI	ACNGT	2 cut(s)	696, 1298
TaiI	ACGT	3 cut(s)	273, 531, 1092
TaqI	TCGA	8 cut(s)	363, 423, 684, 963, 971, 1167, 1194, 1308
TasI	AATT	3 cut(s)	680, 973, 1103
TatI	WGTACW	2 cut(s)	75, 657
TauI	GCSGC	2 cut(s)	282, 1061
TfiI	GAWTC	4 cut(s)	412, 759, 774, 960
Tru1I	TTAA	3 cut(s)	141, 1101, 1106
Tru9I	TTAA	3 cut(s)	141, 1101, 1106
TscAI	CASTG	1 cut(s)	515
TseFI	GTSAC	3 cut(s)	184, 1150, 1292
TseI	GCWGC	6 cut(s)	46, 478, 887, 890, 893, 998
Tsp45I	GTSAC	3 cut(s)	184, 1150, 1292
TspDTI	ATGAA	2 cut(s)	665, 1140
TspGWI	ACGGA	1 cut(s)	618
TspRI	CASTG	1 cut(s)	515
VpaK11BI	GGWCC	3 cut(s)	436, 541, 585
XapI	RAATTY	2 cut(s)	680, 973
XceI	RCATGY	1 cut(s)	1058
XcmI	CCANNNNNNNNNTGG	1 cut(s)	106
XmnI	GAANNNNTTC	1 cut(s)	668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.