Rmu_co8445703.1_g000001

mitogen-activated protein kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8445703.1
OG0005843
Physical Location & Seq
Reverse (-)
2 .. 281
280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8445703.1_g000001.1.cds

Sequence Viewer

Length: 203 bp
atggccggactagaagaactgaggaaaaagctgacacctttgttcgatgcagagaagggtctgggcttgggatcctccaccttggacccgtcagattcatacacactttcggacagaacggtggagttgctgagccgatcgtacggcgtgtacaacatcaacgagctgggactgcagaagtgcacgtcttctacggtggacga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000160 GO:0000165 GO:0000187 GO:0000280 GO:0000910 GO:0001101 GO:0001932 GO:0001934 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0004708 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007049 GO:0007112 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007346 GO:0008150 GO:0008152 GO:0009524 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009682 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009738 GO:0009753 GO:0009755 GO:0009791 GO:0009814 GO:0009864 GO:0009866 GO:0009867 GO:0009873 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031349 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033206 GO:0033554 GO:0033674 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0042742 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045087 GO:0045088 GO:0045089 GO:0045859 GO:0045860 GO:0045937 GO:0048232 GO:0048285 GO:0048364 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048583 GO:0048584 GO:0048609 GO:0048646 GO:0048731 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051301 GO:0051321 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0060255 GO:0061640 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071369 GO:0071395 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0071900 GO:0071902 GO:0080090 GO:0080134 GO:0090696 GO:0090697 GO:0090698 GO:0097305 GO:0097306 GO:0098542 GO:0099402 GO:0140013 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1903046 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
ko04016 ko05418 map04016 map05418
Pfam Domains
Protein Families
Pkinase

Protein Analysis

67

Amino Acids

7.29

Weight (kDa)

4.73

Isoelectric Point (pI)

48.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 66, 79
AcoI YGGCCR 1 cut(s) 3
AfaI GTAC 2 cut(s) 143, 152
AjiI CACGTC 1 cut(s) 186
AluBI AGCT 2 cut(s) 31, 166
AluI AGCT 2 cut(s) 31, 166
Alw21I GWGCWC 1 cut(s) 185
Alw44I GTGCAC 1 cut(s) 181
AlwI GGATC 2 cut(s) 66, 79
AoxI GGCC 1 cut(s) 3
ApaLI GTGCAC 1 cut(s) 181
AspS9I GGNCC 1 cut(s) 85
AvaII GGWCC 1 cut(s) 85
BaeGI GKGCMC 1 cut(s) 185
BamHI GGATCC 1 cut(s) 71
BbsI GAAGAC 1 cut(s) 180
Bbv12I GWGCWC 1 cut(s) 185
BceAI ACGGC 1 cut(s) 160
BfaI CTAG 1 cut(s) 11
BfmI CTRYAG 1 cut(s) 173
BlpI GCTNAGC 1 cut(s) 131
Bme18I GGWCC 1 cut(s) 85
BmgBI CACGTC 1 cut(s) 186
BmgT120I GGNCC 1 cut(s) 85
BmiI GGNNCC 2 cut(s) 73, 87
BmsI GCATC 1 cut(s) 37
BpiI GAAGAC 1 cut(s) 180
Bpu1102I GCTNAGC 1 cut(s) 131
BsaJI CCNNGG 1 cut(s) 81
BseDI CCNNGG 1 cut(s) 81
BseMII CTCAG 2 cut(s) 11, 122
BseSI GKGCMC 1 cut(s) 185
BseYI CCCAGC 1 cut(s) 166
Bsh1285I CGRYCG 1 cut(s) 140
BshFI GGCC 1 cut(s) 5
BsiEI CGRYCG 1 cut(s) 140
BsiHKAI GWGCWC 1 cut(s) 185
BsiSI CCGG 1 cut(s) 6
BsiWI CGTACG 1 cut(s) 141
BslFI GGGAC 1 cut(s) 183
BsmFI GGGAC 1 cut(s) 183
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 1 cut(s) 185
Bsp1407I TGTACA 1 cut(s) 150
Bsp143I GATC 2 cut(s) 71, 137
Bsp1720I GCTNAGC 1 cut(s) 131
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 2 cut(s) 12, 123
BspLI GGNNCC 2 cut(s) 73, 87
BspMAI CTGCAG 1 cut(s) 177
BspPI GGATC 2 cut(s) 66, 79
BsrGI TGTACA 1 cut(s) 150
BssECI CCNNGG 1 cut(s) 81
BssMI GATC 2 cut(s) 71, 137
BssT1I CCWWGG 1 cut(s) 81
Bst4CI ACNGT 2 cut(s) 121, 196
BstAUI TGTACA 1 cut(s) 150
BstDEI CTNAG 2 cut(s) 20, 131
BstKTI GATC 2 cut(s) 74, 140
BstMBI GATC 2 cut(s) 71, 137
BstMCI CGRYCG 1 cut(s) 140
BstMWI GCNNNNNNNGC 1 cut(s) 172
BstSFI CTRYAG 1 cut(s) 173
BstSLI GKGCMC 1 cut(s) 185
BstV2I GAAGAC 1 cut(s) 180
BstX2I RGATCY 1 cut(s) 71
BstYI RGATCY 1 cut(s) 71
BsuRI GGCC 1 cut(s) 5
BtrI CACGTC 1 cut(s) 186
Cfr13I GGNCC 1 cut(s) 85
Csp6I GTAC 2 cut(s) 142, 151
CviJI RGCY 5 cut(s) 5, 31, 66, 135, 166
CviKI_1 RGCY 5 cut(s) 5, 31, 66, 135, 166
CviQI GTAC 2 cut(s) 142, 151
DdeI CTNAG 2 cut(s) 20, 131
DpnI GATC 2 cut(s) 73, 139
DpnII GATC 2 cut(s) 71, 137
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 1 cut(s) 81
Eco47I GGWCC 1 cut(s) 85
EcoT14I CCWWGG 1 cut(s) 81
ErhI CCWWGG 1 cut(s) 81
FaiI YATR 1 cut(s) 100
FaqI GGGAC 1 cut(s) 183
FspBI CTAG 1 cut(s) 11
GsaI CCCAGC 1 cut(s) 170
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 6
HinfI GANTC 1 cut(s) 95
HpaII CCGG 1 cut(s) 6
Hpy166II GTNNAC 3 cut(s) 151, 183, 199
Hpy188I TCNGA 2 cut(s) 94, 112
Hpy8I GTNNAC 3 cut(s) 151, 183, 199
HpyAV CCTTC 1 cut(s) 49
HpyCH4III ACNGT 2 cut(s) 121, 196
HpyCH4IV ACGT 1 cut(s) 185
HpyCH4V TGCA 3 cut(s) 50, 175, 183
HpyF10VI GCNNNNNNNGC 1 cut(s) 172
HpyF3I CTNAG 2 cut(s) 20, 131
HpySE526I ACGT 1 cut(s) 185
Kzo9I GATC 2 cut(s) 71, 137
LpnPI CCDG 3 cut(s) 19, 47, 152
LweI GCATC 1 cut(s) 37
MaeI CTAG 1 cut(s) 11
MaeII ACGT 1 cut(s) 185
MalI GATC 2 cut(s) 73, 139
MboI GATC 2 cut(s) 71, 137
MboII GAAGA 2 cut(s) 26, 180
MflI RGATCY 1 cut(s) 71
MhlI GDGCHC 1 cut(s) 185
MnlI CCTC 2 cut(s) 15, 85
MspI CCGG 1 cut(s) 6
MwoI GCNNNNNNNGC 1 cut(s) 172
NdeII GATC 2 cut(s) 71, 137
NlaIV GGNNCC 2 cut(s) 73, 87
PfeI GAWTC 1 cut(s) 95
Pfl23II CGTACG 1 cut(s) 141
Ple19I CGATCG 1 cut(s) 140
PspFI CCCAGC 1 cut(s) 166
PspLI CGTACG 1 cut(s) 141
PspN4I GGNNCC 2 cut(s) 73, 87
PspPI GGNCC 1 cut(s) 85
PstI CTGCAG 1 cut(s) 177
PsuI RGATCY 1 cut(s) 71
PvuI CGATCG 1 cut(s) 140
RsaI GTAC 2 cut(s) 143, 152
RsaNI GTAC 2 cut(s) 142, 151
Sau3AI GATC 2 cut(s) 71, 137
Sau96I GGNCC 1 cut(s) 85
SduI GDGCHC 1 cut(s) 185
SetI ASST 5 cut(s) 33, 40, 83, 168, 188
SfaNI GCATC 1 cut(s) 37
SfcI CTRYAG 1 cut(s) 173
SinI GGWCC 1 cut(s) 85
SspMI CTAG 1 cut(s) 11
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 2 cut(s) 121, 196
TaiI ACGT 1 cut(s) 188
TaqI TCGA 1 cut(s) 45
TatI WGTACW 1 cut(s) 150
TfiI GAWTC 1 cut(s) 95
TspDTI ATGAA 1 cut(s) 87
VneI GTGCAC 1 cut(s) 181
VpaK11BI GGWCC 1 cut(s) 85
XspI CTAG 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.