Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8481135.1

Orthogroup ID

OG0012937

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 1875

Gene Structure 1875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8481135.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ctctttcacacagttcacaaacccaccaaacaaaccaacaaccatgtatccagcgaacgaagatcaggtctcgggttggtccgtctcgaaaccgacccggaaccaaacccagacgacccgacccactgcgagttcgccgccgacgtggagaagatatacagaatattgcgcaaattccactcccgggtccccaaattagagctcgctctacatcaatccggcgtcgttttgcgctccggcttaaccgagcgagtgctgaaccggtgcggcgacgccgggaatttagggtacaggttcttcgtctgggcctcgcagcagcccaattacagacccagctacgatgtgtacaaagccatgatcaagtccctaagcaaaatgcggcaattcggcgccgtttgggctctgcttgaggagatgaggagagaaaatcaggagctaattactgtggaaatgttcgtggttttgatgcggcgtttcgcttcggcgaggatggtgaagaaagcagtggaggtgctcgatgaaatgcccaagtacgggtgcgaggcggatgagtatgcttttgggtgcttgcttgatgctctgtgtaaaaatgggagtgtgaaagaagcggcgagtttgtttgaggatatgagagttaggttcaagcctggtattaggcattttacttctttgttgtatgggtggtgtagagcagggaagcttatggaggcgaaacatgtgttggtgcagatgagggagggagggttcgagccggacattgtggtgtacaacaatttgcttggtgggtatgctcaggctgggaagatggctgatgcgtatgagctgttgaaggagatgaggaggaagggttgtgagcccaatgcggcttcgtatacgactgtcatccaggcgctttgcgggcaggagaagatggaggaggcgatgagggtgtttgtggagatggagaggagtggttgtgaggctgatgttgttacttatactactttgattggtgggttttgtaagtgggggaagattgtgaggagttatgagattttggagagcatggtacagagagggtttacgccgagtcagatgacttacttgcagattatgttggctcatgagaagaaggaagacttggaggagtgtctggaattaatgggggagatgaggaagatcggttgcatgcctgatcttggtatttacaacacggtgattcggttggcttgcaaattgagggaggtgaaagaaggtgttcggctttggaatgaaatggaagaagctgggttttctccggggcttgacacctttgtcattatgattcatgggtttctcgggcaaggttgtttgatcgaagcttgtgattacttcaaagaaatggttggcagaggccttctgtctgggccacaatatggtaccttgaaggagttaatgaatgctttgttaagagatgagaagctagaaatggctaaagatgtttggagttgcattgtgaccaagggttgtgagcttaacgtgtatgcatggacaatttggattcatgcactgttttcaaaggggcatgtgaaagaggcttgctcatactgcttggacatgatggaggcagatgtaatgccacagccggatacttttgcgaagctcatgcgtggtttaaagaaactttataacagacagattgctgctgagatcacagagaaggtgaggcagatggctgcagatagaaagatcactttcaagatgtataaaagacgcggagagagggacttgaacgaaaaagttaaggagaagaaggatgggggaaggaaacggagggctcgaaaacggcaatggcctagtaaagctaaagccttatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

611

Amino Acids

70.09

Weight (kDa)

8.87

Isoelectric Point (pI)

38.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65820
fragaria_vesca	FvH4_1g18320
prunus_persica	Prupe.6G215900_v2.0.a1
pyrus_communis	pycom02g15460
rosa_chinensis	RchiOBHm_Chr2g0108971
rosa_laevigata	RLG00000017699
rosa_multiflora	Rmu_co8481135.1_g000001 Rmu_sc0014080.1_g000003
rosa_roxburghii	Rroxscaffold_2G00134670
rosa_rugosa	Rorug02G0156700
rosa_samantha	Rh2AG150300 Rh2AG207400 Rh2BG155900 Rh2BG218600 Rh2CG210600 Rh2DG156000 Rh2DG213600
rosa_wichuraiana	Rw0G010990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1647
AasI	GACNNNNNNGTC	1 cut(s)	1292
Acc16I	TGCGCA	1 cut(s)	170
Acc65I	GGTACC	1 cut(s)	1397
AccB1I	GGYRCC	2 cut(s)	389, 1397
AccB7I	CCANNNNNTGG	1 cut(s)	1394
AccI	GTMKAC	1 cut(s)	872
AccII	CGCG	1 cut(s)	1734
AciI	CCGC	9 cut(s)	138, 267, 379, 469, 545, 608, 863, 897, 1734
AcsI	RAATTY	2 cut(s)	173, 280
AcyI	GRCGYC	3 cut(s)	222, 273, 390
AfaI	GTAC	6 cut(s)	290, 347, 533, 767, 1050, 1399
AfiI	CCNNNNNNNGG	5 cut(s)	184, 533, 534, 1178, 1394
AflIII	ACRYGT	2 cut(s)	715, 1497
AgeI	ACCGGT	1 cut(s)	261
AgsI	TTSAA	7 cut(s)	643, 829, 1354, 1405, 1536, 1717, 1750
AjiI	CACGTC	1 cut(s)	145
AjnI	CCWGG	2 cut(s)	646, 885
AjuI	GAANNNNNNNTTGG	4 cut(s)	704, 736, 1103, 1135
AloI	GAACNNNNNNTCC	2 cut(s)	728, 760
Alw21I	GWGCWC	2 cut(s)	204, 516
Alw26I	GTCTC	2 cut(s)	74, 89
Ama87I	CYCGRG	3 cut(s)	71, 183, 1316
AoxI	GGCC	4 cut(s)	306, 1372, 1385, 1811
ApeKI	GCWGC	4 cut(s)	313, 316, 1661, 1694
ApoI	RAATTY	2 cut(s)	173, 280
ArsI	GACNNNNNNTTYG	2 cut(s)	52, 84
AseI	ATTAAT	1 cut(s)	1139
AsiGI	ACCGGT	1 cut(s)	261
Asp700I	GAANNNNTTC	1 cut(s)	1236
Asp718I	GGTACC	1 cut(s)	1397
AspLEI	GCGC	4 cut(s)	171, 234, 392, 892
AspS9I	GGNCC	4 cut(s)	79, 187, 306, 1385
AsuC2I	CCSGG	5 cut(s)	98, 184, 185, 277, 1278
AsuHPI	GGTGA	4 cut(s)	505, 1207, 1237, 1693
AvaI	CYCGRG	3 cut(s)	71, 183, 1316
AvaII	GGWCC	2 cut(s)	79, 187
BanI	GGYRCC	2 cut(s)	389, 1397
BanII	GRGCYC	4 cut(s)	204, 403, 858, 1798
BarI	GAAGNNNNNNTAC	2 cut(s)	281, 313
BbsI	GAAGAC	1 cut(s)	1122
Bbv12I	GWGCWC	2 cut(s)	204, 516
BbvI	GCAGC	4 cut(s)	325, 328, 1648, 1681
BccI	CCATC	7 cut(s)	484, 799, 904, 934, 1573, 1684, 1769
BceAI	ACGGC	2 cut(s)	377, 1820
BcgI	CGANNNNNNTGC	2 cut(s)	1606, 1640
BciT130I	CCWGG	2 cut(s)	648, 887
BciVI	GTATCC	2 cut(s)	58, 1600
BclI	TGATCA	1 cut(s)	357
BcnI	CCSGG	5 cut(s)	98, 184, 185, 277, 1278
BcoDI	GTCTC	2 cut(s)	74, 89
BfaI	CTAG	2 cut(s)	1442, 1815
BfmI	CTRYAG	1 cut(s)	1695
BfoI	RGCGCY	2 cut(s)	393, 893
BfuI	GTATCC	2 cut(s)	58, 1600
BglI	GCCNNNNNGGC	1 cut(s)	398
Bme1390I	CCNGG	7 cut(s)	98, 184, 185, 277, 648, 887, 1278
Bme18I	GGWCC	2 cut(s)	79, 187
BmeT110I	CYCGRG	3 cut(s)	71, 183, 1316
BmgBI	CACGTC	1 cut(s)	145
BmgT120I	GGNCC	4 cut(s)	79, 187, 306, 1385
BmiI	GGNNCC	5 cut(s)	102, 188, 189, 391, 1399
BmrFI	CCNGG	7 cut(s)	98, 184, 185, 277, 648, 887, 1278
BmsI	GCATC	3 cut(s)	456, 565, 802
BpiI	GAAGAC	1 cut(s)	1122
BplI	GAGNNNNNCTC	2 cut(s)	1544, 1576
Bpu10I	CCTNAGC	2 cut(s)	368, 792
BpuEI	CTTGAG	1 cut(s)	428
BpuMI	CCSGG	5 cut(s)	98, 184, 185, 277, 1278
BsaHI	GRCGYC	3 cut(s)	222, 273, 390
BsaI	GGTCTC	1 cut(s)	74
BsaJI	CCNNGG	3 cut(s)	183, 1277, 1479
BsaWI	WCCGGW	1 cut(s)	261
BsaXI	ACNNNNNCTCC	6 cut(s)	728, 758, 832, 862, 940, 970
Bsc4I	CCNNNNNNNGG	5 cut(s)	184, 533, 534, 1178, 1394
Bse118I	RCCGGY	1 cut(s)	261
Bse3DI	GCAATG	1 cut(s)	1814
BseBI	CCWGG	2 cut(s)	648, 887
BseDI	CCNNGG	3 cut(s)	183, 1277, 1479
BseGI	GGATG	4 cut(s)	495, 553, 882, 1780
BseLI	CCNNNNNNNGG	5 cut(s)	184, 533, 534, 1178, 1394
BseMI	GCAATG	1 cut(s)	1814
BseMII	CTCAG	2 cut(s)	806, 1656
BseRI	GAGGAG	7 cut(s)	425, 433, 853, 929, 961, 1036, 1139
BseXI	GCAGC	4 cut(s)	325, 328, 1648, 1681
BseYI	CCCAGC	3 cut(s)	332, 797, 1265
BsgI	GTGCAG	1 cut(s)	746
Bsh1236I	CGCG	1 cut(s)	1734
BshFI	GGCC	4 cut(s)	308, 1374, 1387, 1813
BshNI	GGYRCC	2 cut(s)	389, 1397
BshTI	ACCGGT	1 cut(s)	261
BsiHKAI	GWGCWC	2 cut(s)	204, 516
BsiHKCI	CYCGRG	3 cut(s)	71, 183, 1316
BsiSI	CCGG	9 cut(s)	98, 184, 219, 237, 262, 276, 752, 1277, 1604
BslFI	GGGAC	3 cut(s)	173, 349, 1757
BslI	CCNNNNNNNGG	5 cut(s)	184, 533, 534, 1178, 1394
BsmAI	GTCTC	2 cut(s)	74, 89
BsmBI	CGTCTC	1 cut(s)	89
BsmFI	GGGAC	3 cut(s)	173, 349, 1757
BsmI	GAATGC	1 cut(s)	1423
BsnI	GGCC	4 cut(s)	308, 1374, 1387, 1813
Bso31I	GGTCTC	1 cut(s)	74
BsoBI	CYCGRG	3 cut(s)	71, 183, 1316
Bsp1286I	GDGCHC	5 cut(s)	204, 403, 516, 858, 1798
Bsp1407I	TGTACA	2 cut(s)	345, 765
Bsp143I	GATC	7 cut(s)	62, 357, 1158, 1174, 1332, 1668, 1707
BspACI	CCGC	9 cut(s)	138, 267, 379, 469, 545, 608, 863, 897, 1734
BspANI	GGCC	4 cut(s)	308, 1374, 1387, 1813
BspCNI	CTCAG	2 cut(s)	805, 1657
BspFNI	CGCG	1 cut(s)	1734
BspHI	TCATGA	1 cut(s)	1102
BspLI	GGNNCC	5 cut(s)	102, 188, 189, 391, 1399
BspMAI	CTGCAG	1 cut(s)	1699
BspT107I	GGYRCC	2 cut(s)	389, 1397
BspTNI	GGTCTC	1 cut(s)	74
BsrDI	GCAATG	1 cut(s)	1814
BsrFI	RCCGGY	1 cut(s)	261
BsrGI	TGTACA	2 cut(s)	345, 765
BssAI	RCCGGY	1 cut(s)	261
BssECI	CCNNGG	3 cut(s)	183, 1277, 1479
BssMI	GATC	7 cut(s)	62, 357, 1158, 1174, 1332, 1668, 1707
BssNAI	GTATAC	1 cut(s)	873
BssNI	GRCGYC	3 cut(s)	222, 273, 390
BssT1I	CCWWGG	1 cut(s)	1479
Bst1107I	GTATAC	1 cut(s)	873
Bst2UI	CCWGG	2 cut(s)	648, 887
Bst4CI	ACNGT	5 cut(s)	13, 445, 880, 1195, 1530
BstACI	GRCGYC	3 cut(s)	222, 273, 390
BstAUI	TGTACA	2 cut(s)	345, 765
BstC8I	GCNNGC	6 cut(s)	204, 569, 899, 1169, 1210, 1558
BstDEI	CTNAG	3 cut(s)	368, 792, 1665
BstF5I	GGATG	4 cut(s)	495, 553, 882, 1780
BstFNI	CGCG	1 cut(s)	1734
BstH2I	RGCGCY	2 cut(s)	393, 893
BstHHI	GCGC	4 cut(s)	171, 234, 392, 892
BstKTI	GATC	7 cut(s)	65, 360, 1161, 1177, 1335, 1671, 1710
BstMAI	GTCTC	2 cut(s)	74, 89
BstMBI	GATC	7 cut(s)	62, 357, 1158, 1174, 1332, 1668, 1707
BstMWI	GCNNNNNNNGC	3 cut(s)	398, 898, 1566
BstNI	CCWGG	2 cut(s)	648, 887
BstNSI	RCATGY	3 cut(s)	719, 1171, 1547
BstSCI	CCNGG	7 cut(s)	96, 182, 183, 275, 646, 885, 1276
BstSFI	CTRYAG	1 cut(s)	1695
BstUI	CGCG	1 cut(s)	1734
BstV1I	GCAGC	4 cut(s)	325, 328, 1648, 1681
BstV2I	GAAGAC	1 cut(s)	1122
BstZ17I	GTATAC	1 cut(s)	873
BsuI	GTATCC	2 cut(s)	58, 1600
BsuRI	GGCC	4 cut(s)	308, 1374, 1387, 1813
BtgZI	GCGATG	1 cut(s)	935
BtrI	CACGTC	1 cut(s)	145
BtsCI	GGATG	4 cut(s)	495, 553, 882, 1780
BtsI	GCAGTG	2 cut(s)	124, 510
BtsIMutI	CAGTG	3 cut(s)	124, 510, 1526
Cac8I	GCNNGC	6 cut(s)	204, 569, 899, 1169, 1210, 1558
CciI	TCATGA	1 cut(s)	1102
CfoI	GCGC	4 cut(s)	171, 234, 392, 892
Cfr10I	RCCGGY	1 cut(s)	261
Cfr13I	GGNCC	4 cut(s)	79, 187, 306, 1385
Cfr9I	CCCGGG	1 cut(s)	183
CseI	GACGC	3 cut(s)	211, 281, 1740
Csp6I	GTAC	6 cut(s)	289, 346, 532, 766, 1049, 1398
CspAI	ACCGGT	1 cut(s)	261
CviQI	GTAC	6 cut(s)	289, 346, 532, 766, 1049, 1398
DdeI	CTNAG	3 cut(s)	368, 792, 1665
DinI	GGCGCC	1 cut(s)	391
DpnI	GATC	7 cut(s)	64, 359, 1160, 1176, 1334, 1670, 1709
DpnII	GATC	7 cut(s)	62, 357, 1158, 1174, 1332, 1668, 1707
DraI	TTTAAA	1 cut(s)	1635
DrdI	GACNNNNNNGTC	1 cut(s)	1292
DseDI	GACNNNNNNGTC	1 cut(s)	1292
EciI	GGCGGA	1 cut(s)	560
Ecl136II	GAGCTC	1 cut(s)	202
Eco130I	CCWWGG	1 cut(s)	1479
Eco147I	AGGCCT	1 cut(s)	1374
Eco24I	GRGCYC	4 cut(s)	204, 403, 858, 1798
Eco31I	GGTCTC	1 cut(s)	74
Eco47I	GGWCC	2 cut(s)	79, 187
Eco53kI	GAGCTC	1 cut(s)	202
Eco88I	CYCGRG	3 cut(s)	71, 183, 1316
EcoICRI	GAGCTC	1 cut(s)	202
EcoO109I	RGGNCCY	1 cut(s)	187
EcoRII	CCWGG	2 cut(s)	646, 885
EcoT14I	CCWWGG	1 cut(s)	1479
EcoT22I	ATGCAT	1 cut(s)	1507
EcoT38I	GRGCYC	4 cut(s)	204, 403, 858, 1798
EgeI	GGCGCC	1 cut(s)	391
EheI	GGCGCC	1 cut(s)	391
ErhI	CCWWGG	1 cut(s)	1479
Esp3I	CGTCTC	1 cut(s)	89
FalI	AAGNNNNNCTT	2 cut(s)	1103, 1135
FaqI	GGGAC	3 cut(s)	173, 349, 1757
FauI	CCCGC	1 cut(s)	890
FbaI	TGATCA	1 cut(s)	357
FblI	GTMKAC	1 cut(s)	872
FokI	GGATG	4 cut(s)	502, 560, 869, 1787
FriOI	GRGCYC	4 cut(s)	204, 403, 858, 1798
FspBI	CTAG	2 cut(s)	1442, 1815
FspI	TGCGCA	1 cut(s)	170
GlaI	GCGC	4 cut(s)	170, 233, 391, 891
GsaI	CCCAGC	3 cut(s)	336, 801, 1269
HaeII	RGCGCY	2 cut(s)	393, 893
HaeIII	GGCC	4 cut(s)	308, 1374, 1387, 1813
HapII	CCGG	9 cut(s)	98, 184, 219, 237, 262, 276, 752, 1277, 1604
HgaI	GACGC	3 cut(s)	211, 281, 1740
HhaI	GCGC	4 cut(s)	171, 234, 392, 892
Hin1I	GRCGYC	3 cut(s)	222, 273, 390
Hin6I	GCGC	4 cut(s)	169, 232, 390, 890
HinP1I	GCGC	4 cut(s)	169, 232, 390, 890
HindIII	AAGCTT	2 cut(s)	698, 1338
HinfI	GANTC	4 cut(s)	1069, 1198, 1303, 1519
HpaII	CCGG	9 cut(s)	98, 184, 219, 237, 262, 276, 752, 1277, 1604
HphI	GGTGA	4 cut(s)	505, 1207, 1237, 1693
Hpy166II	GTNNAC	5 cut(s)	16, 346, 766, 873, 1062
Hpy188I	TCNGA	1 cut(s)	1074
Hpy188III	TCNNGA	5 cut(s)	86, 431, 1103, 1133, 1717
Hpy8I	GTNNAC	5 cut(s)	16, 346, 766, 873, 1062
Hpy99I	CGWCG	3 cut(s)	146, 227, 275
HpyAV	CCTTC	9 cut(s)	823, 838, 1105, 1226, 1385, 1399, 1672, 1765, 1776
HpyCH4III	ACNGT	5 cut(s)	13, 445, 880, 1195, 1530
HpyCH4IV	ACGT	2 cut(s)	144, 1497
HpyCH4V	TGCA	8 cut(s)	727, 1087, 1167, 1212, 1470, 1505, 1526, 1697
HpyF10VI	GCNNNNNNNGC	3 cut(s)	398, 898, 1566
HpyF3I	CTNAG	3 cut(s)	368, 792, 1665
HpySE526I	ACGT	2 cut(s)	144, 1497
Hsp92I	GRCGYC	3 cut(s)	222, 273, 390
HspAI	GCGC	4 cut(s)	169, 232, 390, 890
KasI	GGCGCC	1 cut(s)	389
KflI	GGGWCCC	1 cut(s)	187
KpnI	GGTACC	1 cut(s)	1401
Ksp22I	TGATCA	1 cut(s)	357
Kzo9I	GATC	7 cut(s)	62, 357, 1158, 1174, 1332, 1668, 1707
LmnI	GCTCC	2 cut(s)	239, 433
Lsp1109I	GCAGC	4 cut(s)	325, 328, 1648, 1681
LweI	GCATC	3 cut(s)	456, 565, 802
MaeI	CTAG	2 cut(s)	1442, 1815
MaeII	ACGT	2 cut(s)	144, 1497
MaeIII	GTNAC	2 cut(s)	970, 1474
MalI	GATC	7 cut(s)	64, 359, 1160, 1176, 1334, 1670, 1709
MboI	GATC	7 cut(s)	62, 357, 1158, 1174, 1332, 1668, 1707
MhlI	GDGCHC	5 cut(s)	204, 403, 516, 858, 1798
Mly113I	GGCGCC	1 cut(s)	390
MlyI	GAGTC	1 cut(s)	1078
Mph1103I	ATGCAT	1 cut(s)	1507
MroXI	GAANNNNTTC	1 cut(s)	1236
MseI	TTAA	7 cut(s)	242, 1139, 1412, 1427, 1494, 1634, 1761
MslI	CAYNNNNRTG	1 cut(s)	761
MspI	CCGG	9 cut(s)	98, 184, 219, 237, 262, 276, 752, 1277, 1604
MspR9I	CCNGG	7 cut(s)	98, 184, 185, 277, 648, 887, 1278
Mva1269I	GAATGC	1 cut(s)	1423
MvaI	CCWGG	2 cut(s)	648, 887
MvnI	CGCG	1 cut(s)	1734
MwoI	GCNNNNNNNGC	3 cut(s)	398, 898, 1566
NarI	GGCGCC	1 cut(s)	390
NciI	CCSGG	5 cut(s)	98, 184, 185, 277, 1278
NdeII	GATC	7 cut(s)	62, 357, 1158, 1174, 1332, 1668, 1707
NlaIV	GGNNCC	5 cut(s)	102, 188, 189, 391, 1399
NmeAIII	GCCGAG	1 cut(s)	1092
NmuCI	GTSAC	1 cut(s)	1474
NsbI	TGCGCA	1 cut(s)	170
NsiI	ATGCAT	1 cut(s)	1507
NspI	RCATGY	3 cut(s)	719, 1171, 1547
PaeI	GCATGC	1 cut(s)	1171
PagI	TCATGA	1 cut(s)	1102
PceI	AGGCCT	1 cut(s)	1374
PciI	ACATGT	1 cut(s)	715
PcsI	WCGNNNNNNNCGW	2 cut(s)	141, 1795
PctI	GAATGC	1 cut(s)	1423
PdmI	GAANNNNTTC	1 cut(s)	1236
PfeI	GAWTC	3 cut(s)	1198, 1303, 1519
PflMI	CCANNNNNTGG	1 cut(s)	1394
PinAI	ACCGGT	1 cut(s)	261
PleI	GAGTC	1 cut(s)	1077
PluTI	GGCGCC	1 cut(s)	393
PpsI	GAGTC	1 cut(s)	1077
PpuMI	RGGWCCY	1 cut(s)	187
PscI	ACATGT	1 cut(s)	715
PshBI	ATTAAT	1 cut(s)	1139
PsiI	TTATAA	1 cut(s)	1647
Psp124BI	GAGCTC	1 cut(s)	204
Psp5II	RGGWCCY	1 cut(s)	187
Psp6I	CCWGG	2 cut(s)	646, 885
PspFI	CCCAGC	3 cut(s)	332, 797, 1265
PspGI	CCWGG	2 cut(s)	646, 885
PspN4I	GGNNCC	5 cut(s)	102, 188, 189, 391, 1399
PspPI	GGNCC	4 cut(s)	79, 187, 306, 1385
PspPPI	RGGWCCY	1 cut(s)	187
PstI	CTGCAG	1 cut(s)	1699
RsaI	GTAC	6 cut(s)	290, 347, 533, 767, 1050, 1399
RsaNI	GTAC	6 cut(s)	289, 346, 532, 766, 1049, 1398
RseI	CAYNNNNRTG	1 cut(s)	761
SacI	GAGCTC	1 cut(s)	204
SaqAI	TTAA	7 cut(s)	242, 1139, 1412, 1427, 1494, 1634, 1761
Sau3AI	GATC	7 cut(s)	62, 357, 1158, 1174, 1332, 1668, 1707
Sau96I	GGNCC	4 cut(s)	79, 187, 306, 1385
SchI	GAGTC	1 cut(s)	1078
ScrFI	CCNGG	7 cut(s)	98, 184, 185, 277, 648, 887, 1278
SduI	GDGCHC	5 cut(s)	204, 403, 516, 858, 1798
SfaNI	GCATC	3 cut(s)	456, 565, 802
SfcI	CTRYAG	1 cut(s)	1695
SfoI	GGCGCC	1 cut(s)	391
SinI	GGWCC	2 cut(s)	79, 187
SmaI	CCCGGG	1 cut(s)	185
SmiMI	CAYNNNNRTG	1 cut(s)	761
SmlI	CTYRAG	1 cut(s)	407
SmoI	CTYRAG	1 cut(s)	407
SphI	GCATGC	1 cut(s)	1171
SseBI	AGGCCT	1 cut(s)	1374
SsiI	CCGC	9 cut(s)	138, 267, 379, 469, 545, 608, 863, 897, 1734
SspDI	GGCGCC	1 cut(s)	389
SspI	AATATT	1 cut(s)	165
SspMI	CTAG	2 cut(s)	1442, 1815
SstI	GAGCTC	1 cut(s)	204
StuI	AGGCCT	1 cut(s)	1374
StyD4I	CCNGG	7 cut(s)	96, 182, 183, 275, 646, 885, 1276
StyI	CCWWGG	1 cut(s)	1479
TaaI	ACNGT	5 cut(s)	13, 445, 880, 1195, 1530
TaiI	ACGT	2 cut(s)	147, 1500
TaqI	TCGA	5 cut(s)	87, 516, 747, 1335, 1798
TatI	WGTACW	2 cut(s)	345, 765
TauI	GCSGC	6 cut(s)	140, 270, 382, 472, 611, 866
TfiI	GAWTC	3 cut(s)	1198, 1303, 1519
Tru1I	TTAA	7 cut(s)	242, 1139, 1412, 1427, 1494, 1634, 1761
Tru9I	TTAA	7 cut(s)	242, 1139, 1412, 1427, 1494, 1634, 1761
TscAI	CASTG	3 cut(s)	131, 510, 1533
TseFI	GTSAC	1 cut(s)	1474
TseI	GCWGC	4 cut(s)	313, 316, 1661, 1694
Tsp45I	GTSAC	1 cut(s)	1474
TspDTI	ATGAA	5 cut(s)	534, 1266, 1295, 1430, 1511
TspGWI	ACGGA	2 cut(s)	71, 1804
TspMI	CCCGGG	1 cut(s)	183
TspRI	CASTG	3 cut(s)	131, 510, 1533
Van91I	CCANNNNNTGG	1 cut(s)	1394
VpaK11BI	GGWCC	2 cut(s)	79, 187
VspI	ATTAAT	1 cut(s)	1139
XapI	RAATTY	2 cut(s)	173, 280
XceI	RCATGY	3 cut(s)	719, 1171, 1547
XmaI	CCCGGG	1 cut(s)	183
XmiI	GTMKAC	1 cut(s)	872
XmnI	GAANNNNTTC	1 cut(s)	1236
XspI	CTAG	2 cut(s)	1442, 1815
Zsp2I	ATGCAT	1 cut(s)	1507

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.