Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014080.1

Orthogroup ID

OG0012937

Physical Location & Seq

Genomic Coordinates Reverse (-)

3444 .. 5369

Gene Structure 1926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014080.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

atgcgaaggttgtatcagaaatcgatctttctctacaccaaacccaatctctcaatttcaatttcgtccaatccaaacagccccttacagctctttcacacagttcacaaacccaccaaacaaaccaacaaccatgtatccagcgaacgaagatcaggtctcgggttggtccgtctcgaaaccgacccggaaccaaacccagacgacccgacccactgcgagttcgccgccgacgtggagaagatatacagaatattgcgcaaactccactcccgggtccccaaattagagctcgctctacatcaatccggcgtcgttttgcgctccggcttaaccgagcgagtgctgaaccggtgcggcgacgccgggaatttagggtacaggttcttcgtctgggcctcgcagcagcccaattacagacccagctacgatgtgtacaaagccatgatcaagtccctaagcaaaatgcggcaattcggcgccgtttgggctctgcttgaggagatgaggagagaaaatcaggagctaattactgtggaaatgttcgtggttttgatgcggcgtttcgcttcggcgaggatggtgaagaaagcagtggaggtgctcgatgaaatgcccaagtacgggtgcgaggcggatgagtatgcttttgggtgcttgcttgatgctctgtgtaaaaatgggagtgtgaaagaagcggcgagtttgtttgaggatatgagagttaggttcaagcctggtattaggcattttacttctttgttgtatgggtggtgtagagcagggaagcttatggaggcgaaacatgtgttggtgcagatgagggagggagggttcgagccggacattgtggtgtacaacaatttgcttggtgggtatgctcaggctgggaagatggctgatgcgtatgagctgttgaaggagatgaggaggaagggttgtgagcccaatgcggcttcgtatacgactgtcatccaggcgctttgcgggcaggagaagatggaggaggcgatgagggtgtttgtggagatggagaggagtggttgtgaggctgatgttgttacttatactactttgattggtgggttttgtaagtgggggaagattgtgaggagttatgagattttggagagcatggtacagagagggtttacgccgagtcagatgacttacttgcagattatgttggctcatgagaagaaggaagacttggaggagtgtctggaattaatgggggagatgaggaagatcggttgcatgcctgatcttggtatttacaacacggtgattcggttggcttgcaaattgagggaggtgaaagaaggtgttcggctttggaatgaaatggaagaagctgggttttctccggggcttgacacctttgtcattatgattcatgggtttctcgggcaaggttgtttgatcgaagcttgtgattacttcaaagaaatggttggcagaggccttctgtctgggccacaatatggtaccttgaaggagttaatgaatgctttgttaagagatgagaagctagaaatggctaaagatgtttggagttgcattgtgaccaagggttgtgagcttaacgtgtatgcatggacaatttggattcatgcactgttttcaaaggggcatgtgaaagaggcttgctcatactgcttggacatgatggaggcagatgtaatgccacagccggatacttttgcgaagctcatgcgtggtttaaagaaactttataacagacagattgctgctgagatcacagagaaggtgaggcagatggctgcagatagaaagatcactttcaagatgtataaaagacgcggagagagggacttgaacgaaaaagttaaggagaagaaggatgggggaaggaaacggagggctcgaaaacggcaatggcctagtaaagctaaagccttatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

641

Amino Acids

73.53

Weight (kDa)

9.03

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65820
fragaria_vesca	FvH4_1g18320
prunus_persica	Prupe.6G215900_v2.0.a1
pyrus_communis	pycom02g15460
rosa_chinensis	RchiOBHm_Chr2g0108971
rosa_laevigata	RLG00000017699
rosa_multiflora	Rmu_co8481135.1_g000001 Rmu_sc0014080.1_g000003
rosa_roxburghii	Rroxscaffold_2G00134670
rosa_rugosa	Rorug02G0156700
rosa_samantha	Rh2AG150300 Rh2AG207400 Rh2BG155900 Rh2BG218600 Rh2CG210600 Rh2DG156000 Rh2DG213600
rosa_wichuraiana	Rw0G010990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1737
AasI	GACNNNNNNGTC	1 cut(s)	1382
Acc16I	TGCGCA	1 cut(s)	260
Acc65I	GGTACC	1 cut(s)	1487
AccB1I	GGYRCC	2 cut(s)	479, 1487
AccB7I	CCANNNNNTGG	1 cut(s)	1484
AccI	GTMKAC	1 cut(s)	962
AccII	CGCG	1 cut(s)	1824
AciI	CCGC	9 cut(s)	228, 357, 469, 559, 635, 698, 953, 987, 1824
AcsI	RAATTY	1 cut(s)	370
AcyI	GRCGYC	3 cut(s)	312, 363, 480
AfaI	GTAC	6 cut(s)	380, 437, 623, 857, 1140, 1489
AfiI	CCNNNNNNNGG	5 cut(s)	274, 623, 624, 1268, 1484
AflIII	ACRYGT	2 cut(s)	805, 1587
AgeI	ACCGGT	1 cut(s)	351
AgsI	TTSAA	8 cut(s)	60, 733, 919, 1444, 1495, 1626, 1807, 1840
AjiI	CACGTC	1 cut(s)	235
AjnI	CCWGG	2 cut(s)	736, 975
AjuI	GAANNNNNNNTTGG	4 cut(s)	794, 826, 1193, 1225
AloI	GAACNNNNNNTCC	2 cut(s)	818, 850
Alw21I	GWGCWC	2 cut(s)	294, 606
Alw26I	GTCTC	2 cut(s)	164, 179
Ama87I	CYCGRG	3 cut(s)	161, 273, 1406
AoxI	GGCC	4 cut(s)	396, 1462, 1475, 1901
ApeKI	GCWGC	4 cut(s)	403, 406, 1751, 1784
ApoI	RAATTY	1 cut(s)	370
ArsI	GACNNNNNNTTYG	2 cut(s)	142, 174
AseI	ATTAAT	1 cut(s)	1229
AsiGI	ACCGGT	1 cut(s)	351
Asp700I	GAANNNNTTC	1 cut(s)	1326
Asp718I	GGTACC	1 cut(s)	1487
AspLEI	GCGC	4 cut(s)	261, 324, 482, 982
AspS9I	GGNCC	4 cut(s)	169, 277, 396, 1475
AsuC2I	CCSGG	5 cut(s)	188, 274, 275, 367, 1368
AsuHPI	GGTGA	4 cut(s)	595, 1297, 1327, 1783
AvaI	CYCGRG	3 cut(s)	161, 273, 1406
AvaII	GGWCC	2 cut(s)	169, 277
BanI	GGYRCC	2 cut(s)	479, 1487
BanII	GRGCYC	4 cut(s)	294, 493, 948, 1888
BarI	GAAGNNNNNNTAC	2 cut(s)	371, 403
BbsI	GAAGAC	1 cut(s)	1212
Bbv12I	GWGCWC	2 cut(s)	294, 606
BbvI	GCAGC	4 cut(s)	415, 418, 1738, 1771
BccI	CCATC	7 cut(s)	574, 889, 994, 1024, 1663, 1774, 1859
BceAI	ACGGC	2 cut(s)	467, 1910
BcgI	CGANNNNNNTGC	2 cut(s)	1696, 1730
BciT130I	CCWGG	2 cut(s)	738, 977
BciVI	GTATCC	2 cut(s)	148, 1690
BclI	TGATCA	1 cut(s)	447
BcnI	CCSGG	5 cut(s)	188, 274, 275, 367, 1368
BcoDI	GTCTC	2 cut(s)	164, 179
BfaI	CTAG	2 cut(s)	1532, 1905
BfmI	CTRYAG	1 cut(s)	1785
BfoI	RGCGCY	2 cut(s)	483, 983
BfuI	GTATCC	2 cut(s)	148, 1690
BglI	GCCNNNNNGGC	1 cut(s)	488
Bme1390I	CCNGG	7 cut(s)	188, 274, 275, 367, 738, 977, 1368
Bme18I	GGWCC	2 cut(s)	169, 277
BmeT110I	CYCGRG	3 cut(s)	161, 273, 1406
BmgBI	CACGTC	1 cut(s)	235
BmgT120I	GGNCC	4 cut(s)	169, 277, 396, 1475
BmiI	GGNNCC	5 cut(s)	192, 278, 279, 481, 1489
BmrFI	CCNGG	7 cut(s)	188, 274, 275, 367, 738, 977, 1368
BmsI	GCATC	3 cut(s)	546, 655, 892
BpiI	GAAGAC	1 cut(s)	1212
BplI	GAGNNNNNCTC	2 cut(s)	1634, 1666
Bpu10I	CCTNAGC	2 cut(s)	458, 882
BpuEI	CTTGAG	1 cut(s)	518
BpuMI	CCSGG	5 cut(s)	188, 274, 275, 367, 1368
Bsa29I	ATCGAT	1 cut(s)	23
BsaHI	GRCGYC	3 cut(s)	312, 363, 480
BsaI	GGTCTC	1 cut(s)	164
BsaJI	CCNNGG	3 cut(s)	273, 1367, 1569
BsaWI	WCCGGW	1 cut(s)	351
BsaXI	ACNNNNNCTCC	6 cut(s)	818, 848, 922, 952, 1030, 1060
Bsc4I	CCNNNNNNNGG	5 cut(s)	274, 623, 624, 1268, 1484
Bse118I	RCCGGY	1 cut(s)	351
Bse3DI	GCAATG	1 cut(s)	1904
BseBI	CCWGG	2 cut(s)	738, 977
BseCI	ATCGAT	1 cut(s)	23
BseDI	CCNNGG	3 cut(s)	273, 1367, 1569
BseGI	GGATG	4 cut(s)	585, 643, 972, 1870
BseLI	CCNNNNNNNGG	5 cut(s)	274, 623, 624, 1268, 1484
BseMI	GCAATG	1 cut(s)	1904
BseMII	CTCAG	2 cut(s)	896, 1746
BseRI	GAGGAG	7 cut(s)	515, 523, 943, 1019, 1051, 1126, 1229
BseXI	GCAGC	4 cut(s)	415, 418, 1738, 1771
BseYI	CCCAGC	3 cut(s)	422, 887, 1355
BsgI	GTGCAG	1 cut(s)	836
Bsh1236I	CGCG	1 cut(s)	1824
BshFI	GGCC	4 cut(s)	398, 1464, 1477, 1903
BshNI	GGYRCC	2 cut(s)	479, 1487
BshTI	ACCGGT	1 cut(s)	351
BshVI	ATCGAT	1 cut(s)	23
BsiHKAI	GWGCWC	2 cut(s)	294, 606
BsiHKCI	CYCGRG	3 cut(s)	161, 273, 1406
BsiSI	CCGG	9 cut(s)	188, 274, 309, 327, 352, 366, 842, 1367, 1694
BslFI	GGGAC	3 cut(s)	263, 439, 1847
BslI	CCNNNNNNNGG	5 cut(s)	274, 623, 624, 1268, 1484
BsmAI	GTCTC	2 cut(s)	164, 179
BsmBI	CGTCTC	1 cut(s)	179
BsmFI	GGGAC	3 cut(s)	263, 439, 1847
BsmI	GAATGC	1 cut(s)	1513
BsnI	GGCC	4 cut(s)	398, 1464, 1477, 1903
Bso31I	GGTCTC	1 cut(s)	164
BsoBI	CYCGRG	3 cut(s)	161, 273, 1406
Bsp1286I	GDGCHC	5 cut(s)	294, 493, 606, 948, 1888
Bsp1407I	TGTACA	2 cut(s)	435, 855
Bsp143I	GATC	8 cut(s)	24, 152, 447, 1248, 1264, 1422, 1758, 1797
BspACI	CCGC	9 cut(s)	228, 357, 469, 559, 635, 698, 953, 987, 1824
BspANI	GGCC	4 cut(s)	398, 1464, 1477, 1903
BspCNI	CTCAG	2 cut(s)	895, 1747
BspDI	ATCGAT	1 cut(s)	23
BspFNI	CGCG	1 cut(s)	1824
BspHI	TCATGA	1 cut(s)	1192
BspLI	GGNNCC	5 cut(s)	192, 278, 279, 481, 1489
BspMAI	CTGCAG	1 cut(s)	1789
BspT107I	GGYRCC	2 cut(s)	479, 1487
BspTNI	GGTCTC	1 cut(s)	164
BsrDI	GCAATG	1 cut(s)	1904
BsrFI	RCCGGY	1 cut(s)	351
BsrGI	TGTACA	2 cut(s)	435, 855
BssAI	RCCGGY	1 cut(s)	351
BssECI	CCNNGG	3 cut(s)	273, 1367, 1569
BssMI	GATC	8 cut(s)	24, 152, 447, 1248, 1264, 1422, 1758, 1797
BssNAI	GTATAC	1 cut(s)	963
BssNI	GRCGYC	3 cut(s)	312, 363, 480
BssT1I	CCWWGG	1 cut(s)	1569
Bst1107I	GTATAC	1 cut(s)	963
Bst2UI	CCWGG	2 cut(s)	738, 977
Bst4CI	ACNGT	5 cut(s)	103, 535, 970, 1285, 1620
BstACI	GRCGYC	3 cut(s)	312, 363, 480
BstAUI	TGTACA	2 cut(s)	435, 855
BstC8I	GCNNGC	6 cut(s)	294, 659, 989, 1259, 1300, 1648
BstDEI	CTNAG	3 cut(s)	458, 882, 1755
BstF5I	GGATG	4 cut(s)	585, 643, 972, 1870
BstFNI	CGCG	1 cut(s)	1824
BstH2I	RGCGCY	2 cut(s)	483, 983
BstHHI	GCGC	4 cut(s)	261, 324, 482, 982
BstKTI	GATC	8 cut(s)	27, 155, 450, 1251, 1267, 1425, 1761, 1800
BstMAI	GTCTC	2 cut(s)	164, 179
BstMBI	GATC	8 cut(s)	24, 152, 447, 1248, 1264, 1422, 1758, 1797
BstMWI	GCNNNNNNNGC	3 cut(s)	488, 988, 1656
BstNI	CCWGG	2 cut(s)	738, 977
BstNSI	RCATGY	3 cut(s)	809, 1261, 1637
BstSCI	CCNGG	7 cut(s)	186, 272, 273, 365, 736, 975, 1366
BstSFI	CTRYAG	1 cut(s)	1785
BstUI	CGCG	1 cut(s)	1824
BstV1I	GCAGC	4 cut(s)	415, 418, 1738, 1771
BstV2I	GAAGAC	1 cut(s)	1212
BstZ17I	GTATAC	1 cut(s)	963
Bsu15I	ATCGAT	1 cut(s)	23
BsuI	GTATCC	2 cut(s)	148, 1690
BsuRI	GGCC	4 cut(s)	398, 1464, 1477, 1903
BsuTUI	ATCGAT	1 cut(s)	23
BtgZI	GCGATG	1 cut(s)	1025
BtrI	CACGTC	1 cut(s)	235
BtsCI	GGATG	4 cut(s)	585, 643, 972, 1870
BtsI	GCAGTG	2 cut(s)	214, 600
BtsIMutI	CAGTG	3 cut(s)	214, 600, 1616
Cac8I	GCNNGC	6 cut(s)	294, 659, 989, 1259, 1300, 1648
CciI	TCATGA	1 cut(s)	1192
CfoI	GCGC	4 cut(s)	261, 324, 482, 982
Cfr10I	RCCGGY	1 cut(s)	351
Cfr13I	GGNCC	4 cut(s)	169, 277, 396, 1475
Cfr9I	CCCGGG	1 cut(s)	273
ClaI	ATCGAT	1 cut(s)	23
CseI	GACGC	3 cut(s)	301, 371, 1830
Csp6I	GTAC	6 cut(s)	379, 436, 622, 856, 1139, 1488
CspAI	ACCGGT	1 cut(s)	351
CviQI	GTAC	6 cut(s)	379, 436, 622, 856, 1139, 1488
DdeI	CTNAG	3 cut(s)	458, 882, 1755
DinI	GGCGCC	1 cut(s)	481
DpnI	GATC	8 cut(s)	26, 154, 449, 1250, 1266, 1424, 1760, 1799
DpnII	GATC	8 cut(s)	24, 152, 447, 1248, 1264, 1422, 1758, 1797
DraI	TTTAAA	1 cut(s)	1725
DrdI	GACNNNNNNGTC	1 cut(s)	1382
DseDI	GACNNNNNNGTC	1 cut(s)	1382
EciI	GGCGGA	1 cut(s)	650
Ecl136II	GAGCTC	1 cut(s)	292
Eco130I	CCWWGG	1 cut(s)	1569
Eco147I	AGGCCT	1 cut(s)	1464
Eco24I	GRGCYC	4 cut(s)	294, 493, 948, 1888
Eco31I	GGTCTC	1 cut(s)	164
Eco47I	GGWCC	2 cut(s)	169, 277
Eco53kI	GAGCTC	1 cut(s)	292
Eco88I	CYCGRG	3 cut(s)	161, 273, 1406
EcoICRI	GAGCTC	1 cut(s)	292
EcoO109I	RGGNCCY	1 cut(s)	277
EcoRII	CCWGG	2 cut(s)	736, 975
EcoT14I	CCWWGG	1 cut(s)	1569
EcoT22I	ATGCAT	1 cut(s)	1597
EcoT38I	GRGCYC	4 cut(s)	294, 493, 948, 1888
EgeI	GGCGCC	1 cut(s)	481
EheI	GGCGCC	1 cut(s)	481
ErhI	CCWWGG	1 cut(s)	1569
Esp3I	CGTCTC	1 cut(s)	179
FalI	AAGNNNNNCTT	2 cut(s)	1193, 1225
FaqI	GGGAC	3 cut(s)	263, 439, 1847
FauI	CCCGC	1 cut(s)	980
FbaI	TGATCA	1 cut(s)	447
FblI	GTMKAC	1 cut(s)	962
FokI	GGATG	4 cut(s)	592, 650, 959, 1877
FriOI	GRGCYC	4 cut(s)	294, 493, 948, 1888
FspBI	CTAG	2 cut(s)	1532, 1905
FspI	TGCGCA	1 cut(s)	260
GlaI	GCGC	4 cut(s)	260, 323, 481, 981
GsaI	CCCAGC	3 cut(s)	426, 891, 1359
HaeII	RGCGCY	2 cut(s)	483, 983
HaeIII	GGCC	4 cut(s)	398, 1464, 1477, 1903
HapII	CCGG	9 cut(s)	188, 274, 309, 327, 352, 366, 842, 1367, 1694
HgaI	GACGC	3 cut(s)	301, 371, 1830
HhaI	GCGC	4 cut(s)	261, 324, 482, 982
Hin1I	GRCGYC	3 cut(s)	312, 363, 480
Hin6I	GCGC	4 cut(s)	259, 322, 480, 980
HinP1I	GCGC	4 cut(s)	259, 322, 480, 980
HindIII	AAGCTT	2 cut(s)	788, 1428
HinfI	GANTC	4 cut(s)	1159, 1288, 1393, 1609
HpaII	CCGG	9 cut(s)	188, 274, 309, 327, 352, 366, 842, 1367, 1694
HphI	GGTGA	4 cut(s)	595, 1297, 1327, 1783
Hpy166II	GTNNAC	5 cut(s)	106, 436, 856, 963, 1152
Hpy188I	TCNGA	2 cut(s)	18, 1164
Hpy188III	TCNNGA	5 cut(s)	176, 521, 1193, 1223, 1807
Hpy8I	GTNNAC	5 cut(s)	106, 436, 856, 963, 1152
Hpy99I	CGWCG	3 cut(s)	236, 317, 365
HpyAV	CCTTC	9 cut(s)	913, 928, 1195, 1316, 1475, 1489, 1762, 1855, 1866
HpyCH4III	ACNGT	5 cut(s)	103, 535, 970, 1285, 1620
HpyCH4IV	ACGT	2 cut(s)	234, 1587
HpyCH4V	TGCA	8 cut(s)	817, 1177, 1257, 1302, 1560, 1595, 1616, 1787
HpyF10VI	GCNNNNNNNGC	3 cut(s)	488, 988, 1656
HpyF3I	CTNAG	3 cut(s)	458, 882, 1755
HpySE526I	ACGT	2 cut(s)	234, 1587
Hsp92I	GRCGYC	3 cut(s)	312, 363, 480
HspAI	GCGC	4 cut(s)	259, 322, 480, 980
KasI	GGCGCC	1 cut(s)	479
KflI	GGGWCCC	1 cut(s)	277
KpnI	GGTACC	1 cut(s)	1491
Ksp22I	TGATCA	1 cut(s)	447
Kzo9I	GATC	8 cut(s)	24, 152, 447, 1248, 1264, 1422, 1758, 1797
LmnI	GCTCC	2 cut(s)	329, 523
Lsp1109I	GCAGC	4 cut(s)	415, 418, 1738, 1771
LweI	GCATC	3 cut(s)	546, 655, 892
MaeI	CTAG	2 cut(s)	1532, 1905
MaeII	ACGT	2 cut(s)	234, 1587
MaeIII	GTNAC	2 cut(s)	1060, 1564
MalI	GATC	8 cut(s)	26, 154, 449, 1250, 1266, 1424, 1760, 1799
MboI	GATC	8 cut(s)	24, 152, 447, 1248, 1264, 1422, 1758, 1797
MhlI	GDGCHC	5 cut(s)	294, 493, 606, 948, 1888
Mly113I	GGCGCC	1 cut(s)	480
MlyI	GAGTC	1 cut(s)	1168
Mph1103I	ATGCAT	1 cut(s)	1597
MroXI	GAANNNNTTC	1 cut(s)	1326
MseI	TTAA	7 cut(s)	332, 1229, 1502, 1517, 1584, 1724, 1851
MslI	CAYNNNNRTG	1 cut(s)	851
MspI	CCGG	9 cut(s)	188, 274, 309, 327, 352, 366, 842, 1367, 1694
MspR9I	CCNGG	7 cut(s)	188, 274, 275, 367, 738, 977, 1368
Mva1269I	GAATGC	1 cut(s)	1513
MvaI	CCWGG	2 cut(s)	738, 977
MvnI	CGCG	1 cut(s)	1824
MwoI	GCNNNNNNNGC	3 cut(s)	488, 988, 1656
NarI	GGCGCC	1 cut(s)	480
NciI	CCSGG	5 cut(s)	188, 274, 275, 367, 1368
NdeII	GATC	8 cut(s)	24, 152, 447, 1248, 1264, 1422, 1758, 1797
NlaIV	GGNNCC	5 cut(s)	192, 278, 279, 481, 1489
NmeAIII	GCCGAG	1 cut(s)	1182
NmuCI	GTSAC	1 cut(s)	1564
NsbI	TGCGCA	1 cut(s)	260
NsiI	ATGCAT	1 cut(s)	1597
NspI	RCATGY	3 cut(s)	809, 1261, 1637
PaeI	GCATGC	1 cut(s)	1261
PagI	TCATGA	1 cut(s)	1192
PceI	AGGCCT	1 cut(s)	1464
PciI	ACATGT	1 cut(s)	805
PcsI	WCGNNNNNNNCGW	2 cut(s)	231, 1885
PctI	GAATGC	1 cut(s)	1513
PdmI	GAANNNNTTC	1 cut(s)	1326
PfeI	GAWTC	3 cut(s)	1288, 1393, 1609
PflMI	CCANNNNNTGG	1 cut(s)	1484
PinAI	ACCGGT	1 cut(s)	351
PleI	GAGTC	1 cut(s)	1167
PluTI	GGCGCC	1 cut(s)	483
PpsI	GAGTC	1 cut(s)	1167
PpuMI	RGGWCCY	1 cut(s)	277
PscI	ACATGT	1 cut(s)	805
PshBI	ATTAAT	1 cut(s)	1229
PsiI	TTATAA	1 cut(s)	1737
Psp124BI	GAGCTC	1 cut(s)	294
Psp5II	RGGWCCY	1 cut(s)	277
Psp6I	CCWGG	2 cut(s)	736, 975
PspFI	CCCAGC	3 cut(s)	422, 887, 1355
PspGI	CCWGG	2 cut(s)	736, 975
PspN4I	GGNNCC	5 cut(s)	192, 278, 279, 481, 1489
PspPI	GGNCC	4 cut(s)	169, 277, 396, 1475
PspPPI	RGGWCCY	1 cut(s)	277
PstI	CTGCAG	1 cut(s)	1789
RsaI	GTAC	6 cut(s)	380, 437, 623, 857, 1140, 1489
RsaNI	GTAC	6 cut(s)	379, 436, 622, 856, 1139, 1488
RseI	CAYNNNNRTG	1 cut(s)	851
SacI	GAGCTC	1 cut(s)	294
SaqAI	TTAA	7 cut(s)	332, 1229, 1502, 1517, 1584, 1724, 1851
Sau3AI	GATC	8 cut(s)	24, 152, 447, 1248, 1264, 1422, 1758, 1797
Sau96I	GGNCC	4 cut(s)	169, 277, 396, 1475
SchI	GAGTC	1 cut(s)	1168
ScrFI	CCNGG	7 cut(s)	188, 274, 275, 367, 738, 977, 1368
SduI	GDGCHC	5 cut(s)	294, 493, 606, 948, 1888
SfaNI	GCATC	3 cut(s)	546, 655, 892
SfcI	CTRYAG	1 cut(s)	1785
SfoI	GGCGCC	1 cut(s)	481
SinI	GGWCC	2 cut(s)	169, 277
SmaI	CCCGGG	1 cut(s)	275
SmiMI	CAYNNNNRTG	1 cut(s)	851
SmlI	CTYRAG	1 cut(s)	497
SmoI	CTYRAG	1 cut(s)	497
SphI	GCATGC	1 cut(s)	1261
SseBI	AGGCCT	1 cut(s)	1464
SsiI	CCGC	9 cut(s)	228, 357, 469, 559, 635, 698, 953, 987, 1824
SspDI	GGCGCC	1 cut(s)	479
SspI	AATATT	1 cut(s)	255
SspMI	CTAG	2 cut(s)	1532, 1905
SstI	GAGCTC	1 cut(s)	294
StuI	AGGCCT	1 cut(s)	1464
StyD4I	CCNGG	7 cut(s)	186, 272, 273, 365, 736, 975, 1366
StyI	CCWWGG	1 cut(s)	1569
TaaI	ACNGT	5 cut(s)	103, 535, 970, 1285, 1620
TaiI	ACGT	2 cut(s)	237, 1590
TaqI	TCGA	6 cut(s)	23, 177, 606, 837, 1425, 1888
TatI	WGTACW	2 cut(s)	435, 855
TauI	GCSGC	6 cut(s)	230, 360, 472, 562, 701, 956
TfiI	GAWTC	3 cut(s)	1288, 1393, 1609
Tru1I	TTAA	7 cut(s)	332, 1229, 1502, 1517, 1584, 1724, 1851
Tru9I	TTAA	7 cut(s)	332, 1229, 1502, 1517, 1584, 1724, 1851
TscAI	CASTG	3 cut(s)	221, 600, 1623
TseFI	GTSAC	1 cut(s)	1564
TseI	GCWGC	4 cut(s)	403, 406, 1751, 1784
Tsp45I	GTSAC	1 cut(s)	1564
TspDTI	ATGAA	5 cut(s)	624, 1356, 1385, 1520, 1601
TspGWI	ACGGA	2 cut(s)	161, 1894
TspMI	CCCGGG	1 cut(s)	273
TspRI	CASTG	3 cut(s)	221, 600, 1623
Van91I	CCANNNNNTGG	1 cut(s)	1484
VpaK11BI	GGWCC	2 cut(s)	169, 277
VspI	ATTAAT	1 cut(s)	1229
XapI	RAATTY	1 cut(s)	370
XceI	RCATGY	3 cut(s)	809, 1261, 1637
XmaI	CCCGGG	1 cut(s)	273
XmiI	GTMKAC	1 cut(s)	962
XmnI	GAANNNNTTC	1 cut(s)	1326
XspI	CTAG	2 cut(s)	1532, 1905
Zsp2I	ATGCAT	1 cut(s)	1597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.