Rmu_sc0000295.1_g000009

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000295.1
Physical Location & Seq
Forward (+)
55723 .. 56087
365 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000295.1_g000009.1.cds

Sequence Viewer

Length: 216 bp
atgtttaatagcacaattaccgaagatgatagtttcttatgtcctgccgatggggccataatgataacagcagcaagtcatttaccttacaataggaatggattcaaattcttcacaaatgttggagggcttgggaaagctgacattaaaaacatcttggagcatgctgcagatatttacaacaagtggtgggatagagatggagtggtgggatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

71

Amino Acids

7.85

Weight (kDa)

4.99

Isoelectric Point (pI)

23.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 107
AfiI CCNNNNNNNGG 1 cut(s) 50
AgsI TTSAA 1 cut(s) 106
AluBI AGCT 1 cut(s) 140
AluI AGCT 1 cut(s) 140
AoxI GGCC 1 cut(s) 54
ApeKI GCWGC 2 cut(s) 71, 167
ApoI RAATTY 1 cut(s) 107
Asp700I GAANNNNTTC 1 cut(s) 101
AspS9I GGNCC 1 cut(s) 54
BbvI GCAGC 2 cut(s) 83, 154
BccI CCATC 2 cut(s) 44, 194
BfmI CTRYAG 1 cut(s) 168
BglI GCCNNNNNGGC 1 cut(s) 53
BisI GCNGC 2 cut(s) 72, 168
BlsI GCNGC 2 cut(s) 73, 169
BmgT120I GGNCC 1 cut(s) 54
BmiI GGNNCC 1 cut(s) 55
Bsc4I CCNNNNNNNGG 1 cut(s) 50
BseLI CCNNNNNNNGG 1 cut(s) 50
BseXI GCAGC 2 cut(s) 83, 154
BshFI GGCC 1 cut(s) 56
BslI CCNNNNNNNGG 1 cut(s) 50
BsnI GGCC 1 cut(s) 56
BspANI GGCC 1 cut(s) 56
BspLI GGNNCC 1 cut(s) 55
BspMAI CTGCAG 1 cut(s) 172
BstC8I GCNNGC 1 cut(s) 165
BstMWI GCNNNNNNNGC 1 cut(s) 53
BstNSI RCATGY 1 cut(s) 167
BstSFI CTRYAG 1 cut(s) 168
BstV1I GCAGC 2 cut(s) 83, 154
BsuRI GGCC 1 cut(s) 56
Cac8I GCNNGC 1 cut(s) 165
Cfr13I GGNCC 1 cut(s) 54
CviAII CATG 1 cut(s) 164
CviJI RGCY 3 cut(s) 56, 130, 140
CviKI_1 RGCY 3 cut(s) 56, 130, 140
FaeI CATG 1 cut(s) 167
FaiI YATR 3 cut(s) 40, 59, 165
FatI CATG 1 cut(s) 163
Fnu4HI GCNGC 2 cut(s) 72, 168
Fsp4HI GCNGC 2 cut(s) 72, 168
GluI GCNGC 2 cut(s) 72, 168
HaeIII GGCC 1 cut(s) 56
Hin1II CATG 1 cut(s) 167
HinfI GANTC 1 cut(s) 102
HpyCH4V TGCA 1 cut(s) 170
HpyF10VI GCNNNNNNNGC 1 cut(s) 53
Hsp92II CATG 1 cut(s) 167
LmnI GCTCC 1 cut(s) 160
LpnPI CCDG 1 cut(s) 57
Lsp1109I GCAGC 2 cut(s) 83, 154
MboII GAAGA 2 cut(s) 35, 103
MluCI AATT 2 cut(s) 15, 107
MmeI TCCRAC 1 cut(s) 103
MnlI CCTC 1 cut(s) 119
MroXI GAANNNNTTC 1 cut(s) 101
MseI TTAA 2 cut(s) 6, 147
MwoI GCNNNNNNNGC 1 cut(s) 53
NlaIII CATG 1 cut(s) 167
NlaIV GGNNCC 1 cut(s) 55
NspI RCATGY 1 cut(s) 167
PaeI GCATGC 1 cut(s) 167
PdmI GAANNNNTTC 1 cut(s) 101
PfeI GAWTC 1 cut(s) 102
PkrI GCNGC 2 cut(s) 73, 169
PspN4I GGNNCC 1 cut(s) 55
PspPI GGNCC 1 cut(s) 54
PstI CTGCAG 1 cut(s) 172
SaqAI TTAA 2 cut(s) 6, 147
SatI GCNGC 2 cut(s) 72, 168
Sau96I GGNCC 1 cut(s) 54
SetI ASST 2 cut(s) 88, 142
SfcI CTRYAG 1 cut(s) 168
SgeI CNNG 6 cut(s) 56, 87, 143, 169, 176, 196
SphI GCATGC 1 cut(s) 167
Sse9I AATT 2 cut(s) 15, 107
TasI AATT 2 cut(s) 15, 107
TfiI GAWTC 1 cut(s) 102
Tru1I TTAA 2 cut(s) 6, 147
Tru9I TTAA 2 cut(s) 6, 147
TseI GCWGC 2 cut(s) 71, 167
XapI RAATTY 1 cut(s) 107
XceI RCATGY 1 cut(s) 167
XmnI GAANNNNTTC 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.