Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000308.1

Orthogroup ID

OG0003362

Physical Location & Seq

Genomic Coordinates Forward (+)

279025 .. 286361

Gene Structure 7337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

atggggaatcgtgccggtcacctagcggcgtcgcttgccatccaccaccttccctgggtggtgttctgcgaaacgatggacgggagctccgcctgcggtggtggtggactgaatattccgttttggcctgatcctttttccttgattagaatgggttttgggctttcgaagccttattcgagtttcttgtctcgctttcagcagactacagcgaactccatcgaccaaacattgccattgagacgattcgaaagctcaatggaggacgacgggtcgtataaacggggtaggaagaaaatgggtatgtctagaaagcctgaaaaacaaggtcaaggtcaaggtcggtcctttgatgctggtgttagtaaaactgcatccgggcggggctcgaatcgggagagctattcggcaccgcagactgttgtgaggaaacaggttgaccccgaaacggcaaagtacttttcggagattgctaaccttttcgagagtgatgggattgatattggggagcggtcgtctttatgtagtaatgcacttgaagaaactagggggaaagagctggagcttgcgacggattatattattagtcacactttgcagactctagttgagggctgtgaagttgattgcctttgtgcttttctccgaagctgtgcgaagagcttccctttgattgcaatggataagtctggatcacatgtagttgagtctgccatcagggctttatctaagcatcttcaggagagtgacgcgtatgctgttattgaggacactctaaatacaatatgcaaggtaattgtaaagaatcctgttgatctgatgtgtgattgctacggatctcatgttctacgaagtcttctctctctttttaaaggagtgccgttggattcttctgagttccgaatgaggaagacatcttctgctctaccagaacggtttaatttcaaggcatcacgttcagacacggatgtttcaccacattttatacctggattcccggatttactgaagtttcttgtttccgggatgttaaaatgtgctcgaaacaacattaaaaccctgcaagttgatcagtacagcagtttggttctacagactactctgaagttgttagcaggggatgaagaagagctgttgcaaataattcccattcttattggatgtaccagggaagatattgaagaagagaactccattgaaccaactattgtgagagatgttttaggtttgatgaaagaaacagcatttagccatttaatggagcttgttttggaagtagctcctgaagtcttgtacaatggaatcttctcaaagatcttcaggaactctttatttgacctttcgtcccatcattgtgggaattatgtcatccaagcacttatttctcatacaagggatcaggatcaaatggagataatctgggaggaacttggttcgaatttcaaggatctgcttaaaatgggaagatctggtgttattgcttctcttatcggtgcaagtcaaaggcttcatagttacgaacacaagtgttgtcaggctcttgctgctgcagtatattcaagcagtgagtcttcaacatgcattgttccccgtatactgtttcttgatagctacttcaattgtgaagataagtctaattggagttggccaagcggagttaaaatgcacgtcatgggttctttgatactacaagaagtttttcgatttcaaattgaatttatacagccttttattacaagtattacatccatcgcagctgataatgtccttgaagctgctaaggatccagggggtgctcgtgttattgaagcatttttaagttctaatgcttctgcaaaactgaaacgccgattagttatgaggcttcgtggacattttggagagctagcattgcactcgtcaggttcctttactgttgaaaagtgctttactactggtaacatttcacagagggaagccatagtatctgagttggtagccgtgcaaagtgagctttggaatacaaggcaaggtcctcatcttatgaggaaactagatgttgatggatttgctgccagacctgagcagtggaggtccagacaagaatcaaagcaatcaactttgagagacttttctgctacatttggctctagtgagaccaaaccatcaaacaatagtgagactgagcaatcaaagaagagcagctttctttctgatgattataagaaaaaatcaaaagtgggaaaaacagttgaccatcaccaggcatctcctgcaccatttttgagtacaacagggttcaaacgtaagcccaaagaaaaagaacagagcaacaagaagtttgcaagagtctcggtagatgaggatgtttctaaagtgaagaataagtcaaagaagaaaaggcatggtgacgatgctttttctaaatcccccaagttgaaagcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0010033 GO:0010252 GO:0031974 GO:0031981 GO:0034284 GO:0034285 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0065007 GO:0065008 GO:0070013 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF

Protein Analysis

808

Amino Acids

89.86

Weight (kDa)

8.38

Isoelectric Point (pI)

49.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF_NOP9	PF22493	184 - 668	7e-66	NOP9-like PUF repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72320 AT1G72320 AT1G72320 AT1G72320
fragaria_vesca	FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860
malus_domestica	MD09G1172500.v1.1
prunus_persica	Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1
pyrus_communis	pycom09g09000
rosa_chinensis	RchiOBHm_Chr2g0147901
rosa_laevigata	RLG00000020291
rosa_multiflora	Rmu_sc0000308.1_g000059
rosa_roxburghii	Rroxscaffold_2G00099210
rosa_rugosa	Rorug02G0402900
rosa_samantha	Rh2AG459800 Rh2BG473100 Rh2CG447100 Rh2DG482000
rosa_wichuraiana	Rw2G037610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2202
AccB1I	GGYRCC	1 cut(s)	409
AccB7I	CCANNNNNTGG	1 cut(s)	1258
AccBSI	CCGCTC	1 cut(s)	511
AccI	GTMKAC	1 cut(s)	1594
AccII	CGCG	1 cut(s)	752
AciI	CCGC	7 cut(s)	26, 90, 96, 382, 413, 511, 1653
AclWI	GGATC	8 cut(s)	125, 700, 844, 1404, 1410, 1455, 1778, 1791
AcoI	YGGCCR	1 cut(s)	1646
AcsI	RAATTY	2 cut(s)	1438, 1715
AcuI	CTGAAG	5 cut(s)	722, 1028, 1124, 1303, 1305
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	5 cut(s)	458, 1076, 1165, 1295, 2269
AfiI	CCNNNNNNNGG	4 cut(s)	55, 448, 1258, 2242
AflIII	ACRYGT	2 cut(s)	697, 750
AhdI	GACNNNNNGTC	2 cut(s)	271, 1342
AjiI	CACGTC	1 cut(s)	1669
AjnI	CCWGG	5 cut(s)	53, 988, 1166, 1786, 2241
AloI	GAACNNNNNNTCC	2 cut(s)	828, 860
Alw21I	GWGCWC	3 cut(s)	89, 1042, 1798
Alw26I	GTCTC	6 cut(s)	195, 235, 2100, 2129, 2153, 2335
AlwI	GGATC	8 cut(s)	125, 700, 844, 1404, 1410, 1455, 1778, 1791
AoxI	GGCC	2 cut(s)	125, 1646
ApeKI	GCWGC	6 cut(s)	1544, 1547, 1754, 1775, 2051, 2181
ApoI	RAATTY	2 cut(s)	1438, 1715
Asp700I	GAANNNNTTC	2 cut(s)	662, 1698
AspS9I	GGNCC	3 cut(s)	345, 2012, 2073
AsuC2I	CCSGG	3 cut(s)	379, 998, 1024
AsuHPI	GGTGA	4 cut(s)	11, 966, 2231, 2399
AsuII	TTCGAA	3 cut(s)	167, 249, 1436
AsuNHI	GCTAGC	1 cut(s)	1885
AvaII	GGWCC	3 cut(s)	345, 2012, 2073
BalI	TGGCCA	1 cut(s)	1648
BamHI	GGATCC	1 cut(s)	1783
BanI	GGYRCC	1 cut(s)	409
BanII	GRGCYC	2 cut(s)	89, 389
BauI	CACGAG	1 cut(s)	1797
BbsI	GAAGAC	3 cut(s)	848, 917, 1563
Bbv12I	GWGCWC	3 cut(s)	89, 1042, 1798
BbvI	GCAGC	6 cut(s)	1531, 1534, 1762, 1766, 2038, 2193
BceAI	ACGGC	3 cut(s)	465, 865, 1964
BcgI	CGANNNNNNTGC	4 cut(s)	1878, 1912, 2313, 2347
BciT130I	CCWGG	5 cut(s)	55, 990, 1168, 1788, 2243
BclI	TGATCA	1 cut(s)	1069
BcnI	CCSGG	3 cut(s)	379, 998, 1024
BcoDI	GTCTC	6 cut(s)	195, 235, 2100, 2129, 2153, 2335
BfaI	CTAG	7 cut(s)	23, 309, 546, 605, 1886, 2033, 2130
BfmI	CTRYAG	3 cut(s)	207, 1091, 1548
BglI	GCCNNNNNGGC	1 cut(s)	719
BglII	AGATCT	2 cut(s)	1314, 1466
BisI	GCNGC	7 cut(s)	27, 1545, 1548, 1755, 1776, 2052, 2182
BlsI	GCNGC	7 cut(s)	28, 1546, 1549, 1756, 1777, 2053, 2183
BmcAI	AGTACT	1 cut(s)	458
Bme1390I	CCNGG	8 cut(s)	55, 379, 990, 998, 1024, 1168, 1788, 2243
Bme18I	GGWCC	3 cut(s)	345, 2012, 2073
BmeRI	GACNNNNNGTC	2 cut(s)	271, 1342
BmgBI	CACGTC	1 cut(s)	1669
BmgT120I	GGNCC	3 cut(s)	345, 2012, 2073
BmiI	GGNNCC	3 cut(s)	411, 1785, 1906
BmrFI	CCNGG	8 cut(s)	55, 379, 990, 998, 1024, 1168, 1788, 2243
BmsI	GCATC	6 cut(s)	343, 383, 742, 959, 2255, 2383
BmtI	GCTAGC	1 cut(s)	1889
BpiI	GAAGAC	3 cut(s)	848, 917, 1563
BpmI	CTGGAG	1 cut(s)	581
Bpu10I	CCTNAGC	2 cut(s)	1779, 2061
Bpu14I	TTCGAA	3 cut(s)	167, 249, 1436
BpuMI	CCSGG	3 cut(s)	379, 998, 1024
BsaBI	GATNNNNATC	1 cut(s)	1401
BsaHI	GRCGYC	1 cut(s)	29
BsaI	GGTCTC	1 cut(s)	2129
BsaJI	CCNNGG	4 cut(s)	53, 54, 1167, 1787
BsaXI	ACNNNNNCTCC	4 cut(s)	71, 101, 500, 530
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 448, 1258, 2242
Bse118I	RCCGGY	1 cut(s)	14
Bse1I	ACTGG	1 cut(s)	1939
Bse3DI	GCAATG	3 cut(s)	230, 684, 1889
Bse8I	GATNNNNATC	1 cut(s)	1401
BseBI	CCWGG	5 cut(s)	55, 990, 1168, 1788, 2243
BseDI	CCNNGG	4 cut(s)	53, 54, 1167, 1787
BseGI	GGATG	9 cut(s)	39, 374, 973, 1032, 1126, 1166, 1368, 1745, 2350
BseJI	GATNNNNATC	1 cut(s)	1401
BseLI	CCNNNNNNNGG	4 cut(s)	55, 448, 1258, 2242
BseMI	GCAATG	3 cut(s)	230, 684, 1889
BseMII	CTCAG	4 cut(s)	885, 1959, 2052, 2154
BseNI	ACTGG	1 cut(s)	1939
BseXI	GCAGC	6 cut(s)	1531, 1534, 1762, 1766, 2038, 2193
BsgI	GTGCAG	1 cut(s)	2238
Bsh1236I	CGCG	1 cut(s)	752
Bsh1285I	CGRYCG	1 cut(s)	515
BshFI	GGCC	2 cut(s)	127, 1648
BshNI	GGYRCC	1 cut(s)	409
BsiEI	CGRYCG	1 cut(s)	515
BsiHKAI	GWGCWC	3 cut(s)	89, 1042, 1798
BsiSI	CCGG	4 cut(s)	15, 378, 998, 1023
BslFI	GGGAC	1 cut(s)	1330
BslI	CCNNNNNNNGG	4 cut(s)	55, 448, 1258, 2242
BsmAI	GTCTC	6 cut(s)	195, 235, 2100, 2129, 2153, 2335
BsmBI	CGTCTC	1 cut(s)	235
BsmFI	GGGAC	1 cut(s)	1330
BsnI	GGCC	2 cut(s)	127, 1648
Bso31I	GGTCTC	1 cut(s)	2129
Bsp119I	TTCGAA	3 cut(s)	167, 249, 1436
Bsp1286I	GDGCHC	4 cut(s)	89, 389, 1042, 1798
Bsp1407I	TGTACA	1 cut(s)	1293
BspACI	CCGC	7 cut(s)	26, 90, 96, 382, 413, 511, 1653
BspANI	GGCC	2 cut(s)	127, 1648
BspCNI	CTCAG	4 cut(s)	886, 1960, 2053, 2155
BspFNI	CGCG	1 cut(s)	752
BspLI	GGNNCC	3 cut(s)	411, 1785, 1906
BspMAI	CTGCAG	1 cut(s)	1552
BspOI	GCTAGC	1 cut(s)	1889
BspPI	GGATC	8 cut(s)	125, 700, 844, 1404, 1410, 1455, 1778, 1791
BspQI	GCTCTTC	3 cut(s)	653, 1122, 2171
BspT104I	TTCGAA	3 cut(s)	167, 249, 1436
BspT107I	GGYRCC	1 cut(s)	409
BspTNI	GGTCTC	1 cut(s)	2129
BsrBI	CCGCTC	1 cut(s)	511
BsrDI	GCAATG	3 cut(s)	230, 684, 1889
BsrFI	RCCGGY	1 cut(s)	14
BsrGI	TGTACA	1 cut(s)	1293
BsrI	ACTGG	1 cut(s)	1939
BssAI	RCCGGY	1 cut(s)	14
BssECI	CCNNGG	4 cut(s)	53, 54, 1167, 1787
BssNAI	GTATAC	1 cut(s)	1595
BssNI	GRCGYC	1 cut(s)	29
BssSI	CACGAG	1 cut(s)	1797
Bst1107I	GTATAC	1 cut(s)	1595
Bst2BI	CACGAG	1 cut(s)	1797
Bst2UI	CCWGG	5 cut(s)	55, 990, 1168, 1788, 2243
Bst4CI	ACNGT	5 cut(s)	421, 936, 1599, 1915, 2230
Bst6I	CTCTTC	4 cut(s)	653, 1122, 1179, 2171
BstACI	GRCGYC	1 cut(s)	29
BstAPI	GCANNNNNTGC	1 cut(s)	2252
BstAUI	TGTACA	1 cut(s)	1293
BstBI	TTCGAA	3 cut(s)	167, 249, 1436
BstC8I	GCNNGC	4 cut(s)	36, 94, 567, 1887
BstDEI	CTNAG	6 cut(s)	729, 894, 1779, 1968, 2061, 2163
BstEII	GGTNACC	1 cut(s)	17
BstF5I	GGATG	9 cut(s)	39, 374, 973, 1032, 1126, 1166, 1368, 1745, 2350
BstFNI	CGCG	1 cut(s)	752
BstMAI	GTCTC	6 cut(s)	195, 235, 2100, 2129, 2153, 2335
BstMCI	CGRYCG	1 cut(s)	515
BstMWI	GCNNNNNNNGC	8 cut(s)	35, 93, 169, 719, 1544, 1891, 1990, 2252
BstNI	CCWGG	5 cut(s)	55, 990, 1168, 1788, 2243
BstNSI	RCATGY	2 cut(s)	701, 1581
BstPI	GGTNACC	1 cut(s)	17
BstSCI	CCNGG	8 cut(s)	53, 377, 988, 996, 1022, 1166, 1786, 2241
BstSFI	CTRYAG	3 cut(s)	207, 1091, 1548
BstUI	CGCG	1 cut(s)	752
BstV1I	GCAGC	6 cut(s)	1531, 1534, 1762, 1766, 2038, 2193
BstV2I	GAAGAC	3 cut(s)	848, 917, 1563
BstX2I	RGATCY	5 cut(s)	836, 1314, 1447, 1466, 1783
BstXI	CCANNNNNNTGG	1 cut(s)	1355
BstYI	RGATCY	5 cut(s)	836, 1314, 1447, 1466, 1783
BstZ17I	GTATAC	1 cut(s)	1595
BsuRI	GGCC	2 cut(s)	127, 1648
BtgZI	GCGATG	1 cut(s)	1735
BtrI	CACGTC	1 cut(s)	1669
BtsCI	GGATG	9 cut(s)	39, 374, 973, 1032, 1126, 1166, 1368, 1745, 2350
BtsI	GCAGTG	2 cut(s)	1570, 2072
BtsIMutI	CAGTG	2 cut(s)	1570, 2072
Cac8I	GCNNGC	4 cut(s)	36, 94, 567, 1887
Cfr10I	RCCGGY	1 cut(s)	14
Cfr13I	GGNCC	3 cut(s)	345, 2012, 2073
CseI	GACGC	2 cut(s)	18, 758
Csp6I	GTAC	5 cut(s)	457, 1075, 1164, 1294, 2268
CviAII	CATG	6 cut(s)	698, 842, 1578, 1672, 2384, 2424
CviQI	GTAC	5 cut(s)	457, 1075, 1164, 1294, 2268
DdeI	CTNAG	6 cut(s)	729, 894, 1779, 1968, 2061, 2163
DraI	TTTAAA	1 cut(s)	871
DriI	GACNNNNNGTC	2 cut(s)	271, 1342
EaeI	YGGCCR	1 cut(s)	1646
Eam1104I	CTCTTC	4 cut(s)	653, 1122, 1179, 2171
Eam1105I	GACNNNNNGTC	2 cut(s)	271, 1342
EarI	CTCTTC	4 cut(s)	653, 1122, 1179, 2171
EciI	GGCGGA	1 cut(s)	79
Ecl136II	GAGCTC	1 cut(s)	87
Eco24I	GRGCYC	2 cut(s)	89, 389
Eco31I	GGTCTC	1 cut(s)	2129
Eco47I	GGWCC	3 cut(s)	345, 2012, 2073
Eco53kI	GAGCTC	1 cut(s)	87
Eco57I	CTGAAG	5 cut(s)	722, 1028, 1124, 1303, 1305
Eco91I	GGTNACC	1 cut(s)	17
EcoICRI	GAGCTC	1 cut(s)	87
EcoO109I	RGGNCCY	1 cut(s)	2012
EcoO65I	GGTNACC	1 cut(s)	17
EcoRII	CCWGG	5 cut(s)	53, 988, 1166, 1786, 2241
EcoT22I	ATGCAT	1 cut(s)	1583
EcoT38I	GRGCYC	2 cut(s)	89, 389
Esp3I	CGTCTC	1 cut(s)	235
FaeI	CATG	6 cut(s)	701, 845, 1581, 1675, 2387, 2427
FalI	AAGNNNNNCTT	2 cut(s)	2168, 2200
FaqI	GGGAC	1 cut(s)	1330
FatI	CATG	6 cut(s)	697, 841, 1577, 1671, 2383, 2423
FauI	CCCGC	1 cut(s)	375
FbaI	TGATCA	1 cut(s)	1069
FblI	GTMKAC	1 cut(s)	1594
Fnu4HI	GCNGC	7 cut(s)	27, 1545, 1548, 1755, 1776, 2052, 2182
FokI	GGATG	9 cut(s)	26, 361, 980, 1039, 1133, 1173, 1355, 1732, 2357
FriOI	GRGCYC	2 cut(s)	89, 389
Fsp4HI	GCNGC	7 cut(s)	27, 1545, 1548, 1755, 1776, 2052, 2182
FspBI	CTAG	7 cut(s)	23, 309, 546, 605, 1886, 2033, 2130
GluI	GCNGC	7 cut(s)	27, 1545, 1548, 1755, 1776, 2052, 2182
GsuI	CTGGAG	1 cut(s)	581
HaeIII	GGCC	2 cut(s)	127, 1648
HapII	CCGG	4 cut(s)	15, 378, 998, 1023
HgaI	GACGC	2 cut(s)	18, 758
Hin1I	GRCGYC	1 cut(s)	29
Hin1II	CATG	6 cut(s)	701, 845, 1581, 1675, 2387, 2427
HincII	GTYRAC	2 cut(s)	439, 2233
HindII	GTYRAC	2 cut(s)	439, 2233
HpaII	CCGG	4 cut(s)	15, 378, 998, 1023
HphI	GGTGA	4 cut(s)	11, 966, 2231, 2399
Hpy166II	GTNNAC	5 cut(s)	107, 439, 1595, 1871, 2233
Hpy188I	TCNGA	9 cut(s)	466, 647, 819, 895, 902, 961, 1104, 1969, 2194
Hpy8I	GTNNAC	5 cut(s)	107, 439, 1595, 1871, 2233
Hpy99I	CGWCG	3 cut(s)	34, 272, 574
HpyAV	CCTTC	1 cut(s)	59
HpyCH4III	ACNGT	5 cut(s)	421, 936, 1599, 1915, 2230
HpyCH4IV	ACGT	3 cut(s)	955, 1668, 2284
HpyF10VI	GCNNNNNNNGC	8 cut(s)	35, 93, 169, 719, 1544, 1891, 1990, 2252
HpyF3I	CTNAG	6 cut(s)	729, 894, 1779, 1968, 2061, 2163
HpySE526I	ACGT	3 cut(s)	955, 1668, 2284
Hsp92I	GRCGYC	1 cut(s)	29
Hsp92II	CATG	6 cut(s)	701, 845, 1581, 1675, 2387, 2427
Ksp22I	TGATCA	1 cut(s)	1069
LguI	GCTCTTC	3 cut(s)	653, 1122, 2171
LmnI	GCTCC	6 cut(s)	84, 92, 508, 562, 1261, 1285
Lsp1109I	GCAGC	6 cut(s)	1531, 1534, 1762, 1766, 2038, 2193
LweI	GCATC	6 cut(s)	343, 383, 742, 959, 2255, 2383
MaeI	CTAG	7 cut(s)	23, 309, 546, 605, 1886, 2033, 2130
MaeII	ACGT	3 cut(s)	955, 1668, 2284
MaeIII	GTNAC	6 cut(s)	17, 587, 746, 1514, 1937, 2387
MbiI	CCGCTC	1 cut(s)	511
MfeI	CAATTG	1 cut(s)	1618
MflI	RGATCY	5 cut(s)	836, 1314, 1447, 1466, 1783
MhlI	GDGCHC	4 cut(s)	89, 389, 1042, 1798
MlsI	TGGCCA	1 cut(s)	1648
MluCI	AATT	9 cut(s)	795, 940, 1143, 1360, 1438, 1618, 1636, 1710, 1715
MluI	ACGCGT	1 cut(s)	750
MluNI	TGGCCA	1 cut(s)	1648
MlyI	GAGTC	4 cut(s)	595, 716, 1577, 2337
MmeI	TCCRAC	1 cut(s)	864
Mox20I	TGGCCA	1 cut(s)	1648
Mph1103I	ATGCAT	1 cut(s)	1583
MroXI	GAANNNNTTC	2 cut(s)	662, 1698
MscI	TGGCCA	1 cut(s)	1648
MseI	TTAA	8 cut(s)	870, 939, 1031, 1053, 1256, 1455, 1659, 1817
MslI	CAYNNNNRTG	1 cut(s)	1353
Msp20I	TGGCCA	1 cut(s)	1648
MspA1I	CMGCKG	1 cut(s)	1757
MspI	CCGG	4 cut(s)	15, 378, 998, 1023
MspR9I	CCNGG	8 cut(s)	55, 379, 990, 998, 1024, 1168, 1788, 2243
MunI	CAATTG	1 cut(s)	1618
MvaI	CCWGG	5 cut(s)	55, 990, 1168, 1788, 2243
MvnI	CGCG	1 cut(s)	752
MwoI	GCNNNNNNNGC	8 cut(s)	35, 93, 169, 719, 1544, 1891, 1990, 2252
NciI	CCSGG	3 cut(s)	379, 998, 1024
NheI	GCTAGC	1 cut(s)	1885
NlaIII	CATG	6 cut(s)	701, 845, 1581, 1675, 2387, 2427
NlaIV	GGNNCC	3 cut(s)	411, 1785, 1906
NmuCI	GTSAC	4 cut(s)	17, 587, 746, 2387
NsiI	ATGCAT	1 cut(s)	1583
NspI	RCATGY	2 cut(s)	701, 1581
NspV	TTCGAA	3 cut(s)	167, 249, 1436
PasI	CCCWGGG	1 cut(s)	54
PciI	ACATGT	1 cut(s)	697
PciSI	GCTCTTC	3 cut(s)	653, 1122, 2171
PdmI	GAANNNNTTC	2 cut(s)	662, 1698
PfeI	GAWTC	8 cut(s)	7, 246, 391, 805, 887, 993, 1302, 2084
PflMI	CCANNNNNTGG	1 cut(s)	1258
PfoI	TCCNGGA	2 cut(s)	996, 1022
PkrI	GCNGC	7 cut(s)	28, 1546, 1549, 1756, 1777, 2053, 2183
PleI	GAGTC	4 cut(s)	595, 715, 1576, 2336
PpsI	GAGTC	4 cut(s)	595, 715, 1576, 2336
PpuMI	RGGWCCY	1 cut(s)	2012
PscI	ACATGT	1 cut(s)	697
PsiI	TTATAA	1 cut(s)	2202
Psp124BI	GAGCTC	1 cut(s)	89
Psp5II	RGGWCCY	1 cut(s)	2012
Psp6I	CCWGG	5 cut(s)	53, 988, 1166, 1786, 2241
PspEI	GGTNACC	1 cut(s)	17
PspGI	CCWGG	5 cut(s)	53, 988, 1166, 1786, 2241
PspN4I	GGNNCC	3 cut(s)	411, 1785, 1906
PspPI	GGNCC	3 cut(s)	345, 2012, 2073
PspPPI	RGGWCCY	1 cut(s)	2012
PstI	CTGCAG	1 cut(s)	1552
PsuI	RGATCY	5 cut(s)	836, 1314, 1447, 1466, 1783
PvuII	CAGCTG	1 cut(s)	1757
RsaI	GTAC	5 cut(s)	458, 1076, 1165, 1295, 2269
RsaNI	GTAC	5 cut(s)	457, 1075, 1164, 1294, 2268
RseI	CAYNNNNRTG	1 cut(s)	1353
SacI	GAGCTC	1 cut(s)	89
SapI	GCTCTTC	3 cut(s)	653, 1122, 2171
SaqAI	TTAA	8 cut(s)	870, 939, 1031, 1053, 1256, 1455, 1659, 1817
SatI	GCNGC	7 cut(s)	27, 1545, 1548, 1755, 1776, 2052, 2182
Sau96I	GGNCC	3 cut(s)	345, 2012, 2073
ScaI	AGTACT	1 cut(s)	458
SchI	GAGTC	4 cut(s)	595, 716, 1577, 2337
ScrFI	CCNGG	8 cut(s)	55, 379, 990, 998, 1024, 1168, 1788, 2243
SduI	GDGCHC	4 cut(s)	89, 389, 1042, 1798
SfaNI	GCATC	6 cut(s)	343, 383, 742, 959, 2255, 2383
SfcI	CTRYAG	3 cut(s)	207, 1091, 1548
SfuI	TTCGAA	3 cut(s)	167, 249, 1436
SinI	GGWCC	3 cut(s)	345, 2012, 2073
SmiMI	CAYNNNNRTG	1 cut(s)	1353
Sse9I	AATT	9 cut(s)	795, 940, 1143, 1360, 1438, 1618, 1636, 1710, 1715
SsiI	CCGC	7 cut(s)	26, 90, 96, 382, 413, 511, 1653
SspI	AATATT	1 cut(s)	115
SspMI	CTAG	7 cut(s)	23, 309, 546, 605, 1886, 2033, 2130
SstI	GAGCTC	1 cut(s)	89
StyD4I	CCNGG	8 cut(s)	53, 377, 988, 996, 1022, 1166, 1786, 2241
TaaI	ACNGT	5 cut(s)	421, 936, 1599, 1915, 2230
TaiI	ACGT	3 cut(s)	958, 1671, 2287
TaqI	TCGA	9 cut(s)	167, 179, 222, 249, 389, 483, 1042, 1436, 1702
TaqII	GACCGA	1 cut(s)	333
TasI	AATT	9 cut(s)	795, 940, 1143, 1360, 1438, 1618, 1636, 1710, 1715
TatI	WGTACW	4 cut(s)	456, 1074, 1293, 2267
TauI	GCSGC	1 cut(s)	29
TfiI	GAWTC	8 cut(s)	7, 246, 391, 805, 887, 993, 1302, 2084
Tru1I	TTAA	8 cut(s)	870, 939, 1031, 1053, 1256, 1455, 1659, 1817
Tru9I	TTAA	8 cut(s)	870, 939, 1031, 1053, 1256, 1455, 1659, 1817
TscAI	CASTG	2 cut(s)	1570, 2072
TseFI	GTSAC	4 cut(s)	17, 587, 746, 2387
TseI	GCWGC	6 cut(s)	1544, 1547, 1754, 1775, 2051, 2181
Tsp45I	GTSAC	4 cut(s)	17, 587, 746, 2387
TspDTI	ATGAA	3 cut(s)	1137, 1247, 1499
TspGWI	ACGGA	4 cut(s)	108, 587, 849, 980
TspRI	CASTG	2 cut(s)	1570, 2072
Van91I	CCANNNNNTGG	1 cut(s)	1258
VpaK11BI	GGWCC	3 cut(s)	345, 2012, 2073
XapI	RAATTY	2 cut(s)	1438, 1715
XbaI	TCTAGA	1 cut(s)	308
XceI	RCATGY	2 cut(s)	701, 1581
XmiI	GTMKAC	1 cut(s)	1594
XmnI	GAANNNNTTC	2 cut(s)	662, 1698
XspI	CTAG	7 cut(s)	23, 309, 546, 605, 1886, 2033, 2130
ZrmI	AGTACT	1 cut(s)	458
Zsp2I	ATGCAT	1 cut(s)	1583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.