Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001027.1

Orthogroup ID

OG0010294

Physical Location & Seq

Genomic Coordinates Reverse (-)

3879 .. 13080

Gene Structure 9202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001027.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

atggacaagtccagcgctctcgaatacatcaaccagatgttccccacagaggcatcgttatccggcgtcgagccgctaatgcagaagattcacagtgaaattcggcgcgttgatgctggaattctagctgcggttcgccaacagagcaattcagggaccaaagccaaggaagatcttgctgctgccacgcgagccgtggaggaactcatgtataagatccgggaaatcaaaacaaaggctgagcagagtgagacaatggttcaggagatatgtcgtgacattaagaagttggattttgcaaagaagcatataacaaccaccattactgctcttcatcgtctgaccatgcttgtctctgctgttgaacagcttcaagtgatggcttccaaacgacaatataaagaggcggctgcacagttggaggctgtgaaccaattatgtagccattttgaagcctatagggatgttccaaaaatcacagagctcagggagaaatttaagaatatcaaacaaatattaaagtcacacgtgttttccgatttctcaagcttaggtactggaaaggagtcggaagaatctaatttactccagcagctatctgaggcttgcttagttgttgatgcattagaggcatctgtgagggaagaattagtaaataacttttgcagtagggagcttacttcttatgagcaaatctttgaaggagctgaactagctaagttggataagactgaacgaagatatgcatggatcaagcgccgcatgagaacgaatgaagaaatctggaaaatctttccttctgcatggcatgtttcttatcgactctgcattcagttctgcaaaaaaacaaggaagcagctagaagatatccttaataatcagaaagaaaagccagatgttgggacattgctgatggcactacagcgaactcttgaatttgaggatgaattggcagaaaaatttggaggtggtactcgaggcagggaggttggaaatgagattgaagagattggtagaggagaaaacaccactcaaagtgcttcagatattcgaaagaaatatgaaaagaagcttgctgcccatcaaggaaatgccacagaggaaaaggataaagagttatctgtgcctggagctgggttcaacttccgtggaatcatctcatcttgcttcgagcctcacttgactgtttacacagaactagaagagaagacactaatggagaatttggaaaaacttgttcaggaggagacatgggatgttgaggagggaagtcagaataatgttttgtcaagtagcatgcagttgtttcttataatcaagaggaccttaaaacggtgcagtgctttaacaaagaatcagacattatttaacttgttcaaggtgtttcaaaggattctcaaagcatatgcaacaaagctttttataagattacctaaaggcggtacaggaattgttgcagcagcaactggtatggatggacagataaagacatcagacagagatgagagggtgatttgttacattgtcaattcagcggaatattgcaccaacacgtctggtgaactcgctgagagtgtgtccaaaataattgattctcaattcgcagatggggtggatatgtcggaagtgcaggatgaattttcagcagttataacaagagcattggtaaccttggtgcatggcctagaaaccaagtttgacaatgaaatggctgcaatgacacgagttccatggggtacacttgaaagtgttggtgaccaatcagagtatgttaatggcataaatatgatccttgctagtagtatacccatacttggaagccttctttcaccgatctacttccaattcttcttggacaagctggcatcatctcttggtccacgtttctatgctaacattttcaagtgcaagcaaatatcagagactggagctcaacagatgctgttagatactcaagctgtaaagactattcttttggatatcccatcacttggtcaccagacgtcacgtgctgcaagctatgcgaaatttgtaagccgtgagatgagcaaagctgaagcacttctaaaggtcatactgtccccaattgattctgtcgcagatacatatcgtgcattgctaccagagggaacacctatggagtttcagcgaattctggagctcaagggtcttaaaaaggcagatcagcagagtattcttgaagacttcaacaagcatgggccaggaattactcaaccttctaccccaccaccaccagttgccacacctgttccaactgccccgacagtctctctgatacaaattcccacttcaggtggattccttgcacccagagaagatgttctaaccagagcagctgcacttggacgtggtgcagccacaacagggttcaagaggtttctagctttaacagaagctgcaaaggaccggaaagatgggcctttcaggaagctcttcaatgcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000938 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005794 GO:0006810 GO:0006890 GO:0006950 GO:0006970 GO:0007009 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0010256 GO:0010286 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0016482 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032991 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061024 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps53_N

Protein Analysis

821

Amino Acids

91.75

Weight (kDa)

6.51

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50500 AT1G50500 AT1G50500 AT1G50500 AT1G50500
fragaria_vesca	FvH4_6g40130 FvH4_6g40130
malus_domestica	MD09G1135000.v1.1 MD17G1124000.v1.1
prunus_persica	Prupe.3G191700_v2.0.a1
pyrus_communis	pycom09g05610 pycom17g11540
rosa_chinensis	RchiOBHm_Chr2g0154761
rosa_laevigata	RLG00000020801
rosa_multiflora	Rmu_sc0001027.1_g000002
rosa_roxburghii	Rroxscaffold_2G00094120
rosa_rugosa	Rorug02G0444800
rosa_samantha	Rh2BG521400 Rh2CG495700 Rh2DG531500
rosa_wichuraiana	Rw2G041990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1313, 1424, 1652
AatII	GACGTC	1 cut(s)	2006
AccB7I	CCANNNNNTGG	2 cut(s)	899, 1991
AccI	GTMKAC	1 cut(s)	1804
AccII	CGCG	2 cut(s)	108, 190
AciI	CCGC	6 cut(s)	74, 131, 407, 760, 1440, 1535
AclWI	GGATC	3 cut(s)	211, 758, 1783
AcuI	CTGAAG	3 cut(s)	1026, 2076, 2295
AcvI	CACGTG	2 cut(s)	529, 2009
AcyI	GRCGYC	2 cut(s)	66, 2003
AfaI	GTAC	4 cut(s)	556, 973, 1444, 1738
AfeI	AGCGCT	1 cut(s)	16
AfiI	CCNNNNNNNGG	9 cut(s)	49, 899, 1133, 1332, 1439, 1814, 1991, 2312, 2385
AflIII	ACRYGT	3 cut(s)	526, 528, 1551
AjiI	CACGTC	2 cut(s)	1554, 2369
AjnI	CCWGG	2 cut(s)	1126, 2221
Alw21I	GWGCWC	3 cut(s)	486, 1933, 2163
Alw26I	GTCTC	5 cut(s)	245, 358, 1241, 1916, 2293
AlwI	GGATC	3 cut(s)	211, 758, 1783
AlwNI	CAGNNNCTG	4 cut(s)	1466, 1925, 1942, 2417
Ama87I	CYCGRG	1 cut(s)	975
Aor51HI	AGCGCT	1 cut(s)	16
AoxI	GGCC	3 cut(s)	1681, 2219, 2438
ArsI	GACNNNNNNTTYG	2 cut(s)	1957, 1989
Asp700I	GAANNNNTTC	4 cut(s)	369, 2061, 2340, 2453
AspLEI	GCGC	3 cut(s)	17, 108, 759
AspS9I	GGNCC	6 cut(s)	156, 1323, 1877, 2219, 2425, 2438
AsuC2I	CCSGG	1 cut(s)	221
AsuHPI	GGTGA	5 cut(s)	1522, 1571, 1766, 1821, 1988
AsuII	TTCGAA	1 cut(s)	1051
AvaI	CYCGRG	1 cut(s)	975
AvaII	GGWCC	4 cut(s)	156, 1323, 1877, 2425
BanII	GRGCYC	3 cut(s)	486, 1933, 2163
BauI	CACGAG	1 cut(s)	1722
BbrPI	CACGTG	2 cut(s)	529, 2009
BbsI	GAAGAC	2 cut(s)	1214, 2208
Bbv12I	GWGCWC	3 cut(s)	486, 1933, 2163
BccI	CCATC	7 cut(s)	373, 907, 1089, 1469, 1601, 1993, 2429
BceAI	ACGGC	2 cut(s)	179, 2022
BciT130I	CCWGG	2 cut(s)	1128, 2223
BcnI	CCSGG	1 cut(s)	221
BcoDI	GTCTC	5 cut(s)	245, 358, 1241, 1916, 2293
BfaI	CTAG	7 cut(s)	125, 713, 860, 1199, 1685, 1797, 2402
BfmI	CTRYAG	2 cut(s)	457, 920
BfoI	RGCGCY	2 cut(s)	18, 760
BglII	AGATCT	1 cut(s)	172
BlpI	GCTNAGC	1 cut(s)	240
Bme1390I	CCNGG	3 cut(s)	221, 1128, 2223
Bme18I	GGWCC	4 cut(s)	156, 1323, 1877, 2425
BmeT110I	CYCGRG	1 cut(s)	975
BmgBI	CACGTC	2 cut(s)	1554, 2369
BmgT120I	GGNCC	6 cut(s)	156, 1323, 1877, 2219, 2425, 2438
BmiI	GGNNCC	1 cut(s)	157
BmrFI	CCNGG	3 cut(s)	221, 1128, 2223
BmsI	GCATC	6 cut(s)	62, 103, 610, 641, 1874, 1929
BpiI	GAAGAC	2 cut(s)	1214, 2208
BpmI	CTGGAG	4 cut(s)	572, 1149, 1947, 2177
Bpu10I	CCTNAGC	2 cut(s)	485, 550
Bpu1102I	GCTNAGC	1 cut(s)	240
Bpu14I	TTCGAA	1 cut(s)	1051
BpuEI	CTTGAG	3 cut(s)	529, 1938, 2147
BpuMI	CCSGG	1 cut(s)	221
BsaAI	YACGTR	2 cut(s)	529, 2009
BsaBI	GATNNNNATC	1 cut(s)	2106
BsaHI	GRCGYC	2 cut(s)	66, 2003
BsaJI	CCNNGG	5 cut(s)	165, 195, 1147, 1671, 1730
BsaWI	WCCGGW	1 cut(s)	2427
Bsc4I	CCNNNNNNNGG	9 cut(s)	49, 899, 1133, 1332, 1439, 1814, 1991, 2312, 2385
Bse1I	ACTGG	4 cut(s)	562, 1471, 1930, 2255
Bse3DI	GCAATG	3 cut(s)	905, 1722, 2114
Bse8I	GATNNNNATC	1 cut(s)	2106
BseBI	CCWGG	2 cut(s)	1128, 2223
BseDI	CCNNGG	5 cut(s)	165, 195, 1147, 1671, 1730
BseGI	GGATG	5 cut(s)	469, 949, 1261, 1480, 1639
BseJI	GATNNNNATC	1 cut(s)	2106
BseLI	CCNNNNNNNGG	9 cut(s)	49, 899, 1133, 1332, 1439, 1814, 1991, 2312, 2385
BseMI	GCAATG	3 cut(s)	905, 1722, 2114
BseMII	CTCAG	4 cut(s)	231, 499, 591, 1560
BseNI	ACTGG	4 cut(s)	562, 1471, 1930, 2255
BseRI	GAGGAG	3 cut(s)	1032, 1259, 1277
BseYI	CCCAGC	1 cut(s)	1133
BsgI	GTGCAG	5 cut(s)	396, 1357, 1649, 2343, 2394
Bsh1236I	CGCG	2 cut(s)	108, 190
BshFI	GGCC	3 cut(s)	1683, 2221, 2440
BsiHKAI	GWGCWC	3 cut(s)	486, 1933, 2163
BsiHKCI	CYCGRG	1 cut(s)	975
BsiSI	CCGG	3 cut(s)	63, 220, 2428
BslFI	GGGAC	3 cut(s)	169, 916, 2065
BslI	CCNNNNNNNGG	9 cut(s)	49, 899, 1133, 1332, 1439, 1814, 1991, 2312, 2385
BsmAI	GTCTC	5 cut(s)	245, 358, 1241, 1916, 2293
BsmFI	GGGAC	3 cut(s)	169, 916, 2065
BsmI	GAATGC	1 cut(s)	828
BsnI	GGCC	3 cut(s)	1683, 2221, 2440
BsoBI	CYCGRG	1 cut(s)	975
Bsp119I	TTCGAA	1 cut(s)	1051
Bsp1286I	GDGCHC	3 cut(s)	486, 1933, 2163
Bsp143I	GATC	6 cut(s)	172, 216, 750, 1788, 1833, 2182
Bsp1720I	GCTNAGC	1 cut(s)	240
Bsp19I	CCATGG	1 cut(s)	1730
BspACI	CCGC	6 cut(s)	74, 131, 407, 760, 1440, 1535
BspANI	GGCC	3 cut(s)	1683, 2221, 2440
BspCNI	CTCAG	4 cut(s)	232, 498, 592, 1561
BspFNI	CGCG	2 cut(s)	108, 190
BspLI	GGNNCC	1 cut(s)	157
BspPI	GGATC	3 cut(s)	211, 758, 1783
BspQI	GCTCTTC	2 cut(s)	336, 2459
BspT104I	TTCGAA	1 cut(s)	1051
BsrDI	GCAATG	3 cut(s)	905, 1722, 2114
BsrI	ACTGG	4 cut(s)	562, 1471, 1930, 2255
BssECI	CCNNGG	5 cut(s)	165, 195, 1147, 1671, 1730
BssMI	GATC	6 cut(s)	172, 216, 750, 1788, 1833, 2182
BssNAI	GTATAC	1 cut(s)	1805
BssNI	GRCGYC	2 cut(s)	66, 2003
BssSI	CACGAG	1 cut(s)	1722
BssT1I	CCWWGG	3 cut(s)	165, 1671, 1730
Bst1107I	GTATAC	1 cut(s)	1805
Bst2BI	CACGAG	1 cut(s)	1722
Bst2UI	CCWGG	2 cut(s)	1128, 2223
Bst4CI	ACNGT	6 cut(s)	95, 417, 1186, 1335, 2079, 2287
Bst6I	CTCTTC	4 cut(s)	336, 999, 1197, 2459
BstACI	GRCGYC	2 cut(s)	66, 2003
BstAPI	GCANNNNNTGC	1 cut(s)	2021
BstBAI	YACGTR	2 cut(s)	529, 2009
BstBI	TTCGAA	1 cut(s)	1051
BstC8I	GCNNGC	7 cut(s)	192, 607, 1074, 1298, 1863, 1910, 2017
BstDEI	CTNAG	7 cut(s)	240, 485, 550, 600, 610, 717, 1569
BstDSI	CCRYGG	3 cut(s)	195, 1147, 1730
BstEII	GGTNACC	3 cut(s)	1666, 1754, 1994
BstF5I	GGATG	5 cut(s)	469, 949, 1261, 1480, 1639
BstFNI	CGCG	2 cut(s)	108, 190
BstH2I	RGCGCY	2 cut(s)	18, 760
BstHHI	GCGC	3 cut(s)	17, 108, 759
BstKTI	GATC	6 cut(s)	175, 219, 753, 1791, 1836, 2185
BstMAI	GTCTC	5 cut(s)	245, 358, 1241, 1916, 2293
BstMBI	GATC	6 cut(s)	172, 216, 750, 1788, 1833, 2182
BstMWI	GCNNNNNNNGC	6 cut(s)	79, 144, 191, 629, 713, 2021
BstNI	CCWGG	2 cut(s)	1128, 2223
BstNSI	RCATGY	2 cut(s)	812, 1300
BstPI	GGTNACC	3 cut(s)	1666, 1754, 1994
BstSCI	CCNGG	3 cut(s)	219, 1126, 2221
BstSFI	CTRYAG	2 cut(s)	457, 920
BstUI	CGCG	2 cut(s)	108, 190
BstV2I	GAAGAC	2 cut(s)	1214, 2208
BstX2I	RGATCY	2 cut(s)	172, 216
BstYI	RGATCY	2 cut(s)	172, 216
BstZ17I	GTATAC	1 cut(s)	1805
BsuRI	GGCC	3 cut(s)	1683, 2221, 2440
BtgI	CCRYGG	3 cut(s)	195, 1147, 1730
BtrI	CACGTC	2 cut(s)	1554, 2369
BtsCI	GGATG	5 cut(s)	469, 949, 1261, 1480, 1639
BtsI	GCAGTG	1 cut(s)	1345
BtsIMutI	CAGTG	2 cut(s)	100, 1345
Cac8I	GCNNGC	7 cut(s)	192, 607, 1074, 1298, 1863, 1910, 2017
CaiI	CAGNNNCTG	4 cut(s)	1466, 1925, 1942, 2417
CfoI	GCGC	3 cut(s)	17, 108, 759
Cfr13I	GGNCC	6 cut(s)	156, 1323, 1877, 2219, 2425, 2438
CseI	GACGC	1 cut(s)	55
Csp6I	GTAC	4 cut(s)	555, 972, 1443, 1737
CspCI	CAANNNNNGTGG	2 cut(s)	1129, 1164
CviQI	GTAC	4 cut(s)	555, 972, 1443, 1737
DdeI	CTNAG	7 cut(s)	240, 485, 550, 600, 610, 717, 1569
DpnI	GATC	6 cut(s)	174, 218, 752, 1790, 1835, 2184
DpnII	GATC	6 cut(s)	172, 216, 750, 1788, 1833, 2182
Eam1104I	CTCTTC	4 cut(s)	336, 999, 1197, 2459
EarI	CTCTTC	4 cut(s)	336, 999, 1197, 2459
Ecl136II	GAGCTC	3 cut(s)	484, 1931, 2161
Eco130I	CCWWGG	3 cut(s)	165, 1671, 1730
Eco24I	GRGCYC	3 cut(s)	486, 1933, 2163
Eco32I	GATATC	2 cut(s)	868, 1981
Eco47I	GGWCC	4 cut(s)	156, 1323, 1877, 2425
Eco47III	AGCGCT	1 cut(s)	16
Eco53kI	GAGCTC	3 cut(s)	484, 1931, 2161
Eco57I	CTGAAG	3 cut(s)	1026, 2076, 2295
Eco72I	CACGTG	2 cut(s)	529, 2009
Eco88I	CYCGRG	1 cut(s)	975
Eco91I	GGTNACC	3 cut(s)	1666, 1754, 1994
EcoICRI	GAGCTC	3 cut(s)	484, 1931, 2161
EcoO109I	RGGNCCY	1 cut(s)	1323
EcoO65I	GGTNACC	3 cut(s)	1666, 1754, 1994
EcoRI	GAATTC	2 cut(s)	120, 2151
EcoRII	CCWGG	2 cut(s)	1126, 2221
EcoRV	GATATC	2 cut(s)	868, 1981
EcoT14I	CCWWGG	3 cut(s)	165, 1671, 1730
EcoT22I	ATGCAT	2 cut(s)	625, 748
EcoT38I	GRGCYC	3 cut(s)	486, 1933, 2163
ErhI	CCWWGG	3 cut(s)	165, 1671, 1730
FalI	AAGNNNNNCTT	4 cut(s)	855, 887, 1310, 1342
FaqI	GGGAC	3 cut(s)	169, 916, 2065
FauNDI	CATATG	1 cut(s)	1405
FblI	GTMKAC	1 cut(s)	1804
FokI	GGATG	5 cut(s)	476, 956, 1268, 1487, 1646
FriOI	GRGCYC	3 cut(s)	486, 1933, 2163
FspBI	CTAG	7 cut(s)	125, 713, 860, 1199, 1685, 1797, 2402
GlaI	GCGC	3 cut(s)	16, 107, 758
GsaI	CCCAGC	1 cut(s)	1137
GsuI	CTGGAG	4 cut(s)	572, 1149, 1947, 2177
HaeII	RGCGCY	2 cut(s)	18, 760
HaeIII	GGCC	3 cut(s)	1683, 2221, 2440
HapII	CCGG	3 cut(s)	63, 220, 2428
HgaI	GACGC	1 cut(s)	55
HhaI	GCGC	3 cut(s)	17, 108, 759
Hin1I	GRCGYC	2 cut(s)	66, 2003
Hin6I	GCGC	3 cut(s)	15, 106, 757
HinP1I	GCGC	3 cut(s)	15, 106, 757
HindIII	AAGCTT	3 cut(s)	547, 1070, 1415
HpaII	CCGG	3 cut(s)	63, 220, 2428
HphI	GGTGA	5 cut(s)	1522, 1571, 1766, 1821, 1988
Hpy166II	GTNNAC	6 cut(s)	430, 1189, 1562, 1739, 1805, 1880
Hpy8I	GTNNAC	6 cut(s)	430, 1189, 1562, 1739, 1805, 1880
Hpy99I	CGWCG	1 cut(s)	71
HpyAV	CCTTC	4 cut(s)	695, 807, 1832, 2247
HpyCH4III	ACNGT	6 cut(s)	95, 417, 1186, 1335, 2079, 2287
HpyCH4IV	ACGT	6 cut(s)	528, 1553, 1882, 2003, 2008, 2368
HpyF10VI	GCNNNNNNNGC	6 cut(s)	79, 144, 191, 629, 713, 2021
HpyF3I	CTNAG	7 cut(s)	240, 485, 550, 600, 610, 717, 1569
HpySE526I	ACGT	6 cut(s)	528, 1553, 1882, 2003, 2008, 2368
Hsp92I	GRCGYC	2 cut(s)	66, 2003
HspAI	GCGC	3 cut(s)	15, 106, 757
Kzo9I	GATC	6 cut(s)	172, 216, 750, 1788, 1833, 2182
LguI	GCTCTTC	2 cut(s)	336, 2459
LmnI	GCTCC	5 cut(s)	673, 704, 1130, 1928, 2158
LweI	GCATC	6 cut(s)	62, 103, 610, 641, 1874, 1929
MaeI	CTAG	7 cut(s)	125, 713, 860, 1199, 1685, 1797, 2402
MaeII	ACGT	6 cut(s)	528, 1553, 1882, 2003, 2008, 2368
MaeIII	GTNAC	7 cut(s)	275, 522, 1517, 1666, 1754, 1994, 2004
MalI	GATC	6 cut(s)	174, 218, 752, 1790, 1835, 2184
MboI	GATC	6 cut(s)	172, 216, 750, 1788, 1833, 2182
MfeI	CAATTG	1 cut(s)	2085
MflI	RGATCY	2 cut(s)	172, 216
MhlI	GDGCHC	3 cut(s)	486, 1933, 2163
MlyI	GAGTC	2 cut(s)	575, 816
MmeI	TCCRAC	7 cut(s)	270, 399, 549, 702, 970, 1602, 2297
Mph1103I	ATGCAT	2 cut(s)	625, 748
MroXI	GAANNNNTTC	4 cut(s)	369, 2061, 2340, 2453
MslI	CAYNNNNRTG	1 cut(s)	1784
MspA1I	CMGCKG	2 cut(s)	1535, 2357
MspI	CCGG	3 cut(s)	63, 220, 2428
MspR9I	CCNGG	3 cut(s)	221, 1128, 2223
MunI	CAATTG	1 cut(s)	2085
Mva1269I	GAATGC	1 cut(s)	828
MvaI	CCWGG	2 cut(s)	1128, 2223
MvnI	CGCG	2 cut(s)	108, 190
MwoI	GCNNNNNNNGC	6 cut(s)	79, 144, 191, 629, 713, 2021
NciI	CCSGG	1 cut(s)	221
NcoI	CCATGG	1 cut(s)	1730
NdeI	CATATG	1 cut(s)	1405
NdeII	GATC	6 cut(s)	172, 216, 750, 1788, 1833, 2182
NlaIV	GGNNCC	1 cut(s)	157
NmuCI	GTSAC	5 cut(s)	275, 522, 1754, 1994, 2004
NsiI	ATGCAT	2 cut(s)	625, 748
NspI	RCATGY	2 cut(s)	812, 1300
NspV	TTCGAA	1 cut(s)	1051
PaeI	GCATGC	1 cut(s)	1300
PaeR7I	CTCGAG	1 cut(s)	975
PciSI	GCTCTTC	2 cut(s)	336, 2459
PcsI	WCGNNNNNNNCGW	1 cut(s)	534
PctI	GAATGC	1 cut(s)	828
PdmI	GAANNNNTTC	4 cut(s)	369, 2061, 2340, 2453
PfeI	GAWTC	8 cut(s)	88, 575, 1152, 1354, 1393, 1592, 2090, 2319
PflMI	CCANNNNNTGG	2 cut(s)	899, 1991
PfoI	TCCNGGA	1 cut(s)	219
PleI	GAGTC	2 cut(s)	574, 816
PmaCI	CACGTG	2 cut(s)	529, 2009
PmlI	CACGTG	2 cut(s)	529, 2009
PpsI	GAGTC	2 cut(s)	574, 816
Ppu21I	YACGTR	2 cut(s)	529, 2009
PpuMI	RGGWCCY	1 cut(s)	1323
PsiI	TTATAA	3 cut(s)	1313, 1424, 1652
Psp124BI	GAGCTC	3 cut(s)	486, 1933, 2163
Psp5II	RGGWCCY	1 cut(s)	1323
Psp6I	CCWGG	2 cut(s)	1126, 2221
PspCI	CACGTG	2 cut(s)	529, 2009
PspEI	GGTNACC	3 cut(s)	1666, 1754, 1994
PspFI	CCCAGC	1 cut(s)	1133
PspGI	CCWGG	2 cut(s)	1126, 2221
PspN4I	GGNNCC	1 cut(s)	157
PspPI	GGNCC	6 cut(s)	156, 1323, 1877, 2219, 2425, 2438
PspPPI	RGGWCCY	1 cut(s)	1323
PspXI	VCTCGAGB	1 cut(s)	975
PstNI	CAGNNNCTG	4 cut(s)	1466, 1925, 1942, 2417
PsuI	RGATCY	2 cut(s)	172, 216
PvuII	CAGCTG	1 cut(s)	2357
RsaI	GTAC	4 cut(s)	556, 973, 1444, 1738
RsaNI	GTAC	4 cut(s)	555, 972, 1443, 1737
RseI	CAYNNNNRTG	1 cut(s)	1784
SacI	GAGCTC	3 cut(s)	486, 1933, 2163
SapI	GCTCTTC	2 cut(s)	336, 2459
Sau3AI	GATC	6 cut(s)	172, 216, 750, 1788, 1833, 2182
Sau96I	GGNCC	6 cut(s)	156, 1323, 1877, 2219, 2425, 2438
SchI	GAGTC	2 cut(s)	575, 816
ScrFI	CCNGG	3 cut(s)	221, 1128, 2223
SduI	GDGCHC	3 cut(s)	486, 1933, 2163
SfaNI	GCATC	6 cut(s)	62, 103, 610, 641, 1874, 1929
SfcI	CTRYAG	2 cut(s)	457, 920
Sfr274I	CTCGAG	1 cut(s)	975
SfuI	TTCGAA	1 cut(s)	1051
SinI	GGWCC	4 cut(s)	156, 1323, 1877, 2425
SlaI	CTCGAG	1 cut(s)	975
SmiMI	CAYNNNNRTG	1 cut(s)	1784
SmlI	CTYRAG	4 cut(s)	544, 975, 1953, 2162
SmoI	CTYRAG	4 cut(s)	544, 975, 1953, 2162
SphI	GCATGC	1 cut(s)	1300
SsiI	CCGC	6 cut(s)	74, 131, 407, 760, 1440, 1535
SspI	AATATT	2 cut(s)	516, 1541
SspMI	CTAG	7 cut(s)	125, 713, 860, 1199, 1685, 1797, 2402
SstI	GAGCTC	3 cut(s)	486, 1933, 2163
StyD4I	CCNGG	3 cut(s)	219, 1126, 2221
StyI	CCWWGG	3 cut(s)	165, 1671, 1730
TaaI	ACNGT	6 cut(s)	95, 417, 1186, 1335, 2079, 2287
TaiI	ACGT	6 cut(s)	531, 1556, 1885, 2006, 2011, 2371
TaqI	TCGA	6 cut(s)	21, 69, 820, 976, 1051, 1170
TauI	GCSGC	3 cut(s)	76, 410, 762
TfiI	GAWTC	8 cut(s)	88, 575, 1152, 1354, 1393, 1592, 2090, 2319
TscAI	CASTG	2 cut(s)	100, 1345
TseFI	GTSAC	5 cut(s)	275, 522, 1754, 1994, 2004
Tsp45I	GTSAC	5 cut(s)	275, 522, 1754, 1994, 2004
TspDTI	ATGAA	6 cut(s)	323, 789, 960, 1077, 1650, 1719
TspGWI	ACGGA	1 cut(s)	1136
TspRI	CASTG	2 cut(s)	100, 1345
Van91I	CCANNNNNTGG	2 cut(s)	899, 1991
VpaK11BI	GGWCC	4 cut(s)	156, 1323, 1877, 2425
XceI	RCATGY	2 cut(s)	812, 1300
XcmI	CCANNNNNNNNNTGG	1 cut(s)	193
XhoI	CTCGAG	1 cut(s)	975
XmiI	GTMKAC	1 cut(s)	1804
XmnI	GAANNNNTTC	4 cut(s)	369, 2061, 2340, 2453
XspI	CTAG	7 cut(s)	125, 713, 860, 1199, 1685, 1797, 2402
ZraI	GACGTC	1 cut(s)	2004
Zsp2I	ATGCAT	2 cut(s)	625, 748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.