Rmu_sc0001083.1_g000006

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001083.1
OG0013310
Physical Location & Seq
Forward (+)
51874 .. 53908
2035 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1848 bp
atggcaacagccacatctactagtactactgctgctgctgctgctctcaaagctcacccccatcaacaaccacccaccaaacccagacgccgcaacaacaacccgacccggaagctcgacccgccgacgattgtctcccccgagaactcctggtgctgtcctgcctcaaaaccaatcccgacccattcccgccgaggcggcgagctcgacccggttgaggactacccatctccgaattcctcgccgtcgtcgtcgttcaggatccggttctctccggggagcttatccccagtcatggacttcactccggctttgagcaacggtcacaacgattcgtataactcgagcttcactcggttcaatagtatgctcaatgcgggtctgctgaacccaatgtcgccgccgccgccgcggtccagcccgaccctcttcgaaatgatggccagcgagcccgaaatggccaacccgaaacccgcccagatccaccaaaacggcgtcgcgccgccgccgaggactactcacatgggtttggtccaggacaagcaggcgctgatgatgcagcgggtttcggacctcttgggttcccggagccccgggaaccagttcaatgacccgaccaacagtgacatcaagctgacgttgagctccaaggacgggttcagcgtctcgatgagtctgcaccgtccgattctcatcgcgcacagccggtttttcgccgtgaagctctcggacaggtgggtcaagcagcagagaacgacgccgtcttcgtcgccgccgtacaatgtggagattgctgactgtgatgacgtggaggtttatattgaggctttgaggttgatgtattgtaaggatctgaggaagagactaatgaaggaggacgttcctaaagtgcttgggattttgaaggtttcggcggcaattgggtttgatgctggtgttttatcttgtttggagtacttggaggcggcgccgtgggctgaggaagaagaggagaaggtggcatcgctgttgtcggagctgcggcttgaaggtgttggagctggggaagtgttgaagagggtgtcgttggaagtggctaatgggactgaggagggtaatgacaatgaagaagttttagtaaagcttctgcatgtggttcttgaaggaaaggatgagaaggcaaggcgcgagatgaaaggattggtgactaagatgcttcgtgagaattcgtctcataatgaactccggaaagagtcgttgtactcggcttgtgatgggtgtctgcaattgctttgccaccatttttctcgggcagcagaggcagacttgaaggatgtgggacagattgcaaggcaagcggataatttgcattggattttggatattttgattgacagacaaatggctgaggatttcttgaaaacatgggcatctcaaactgagttgtctgaatcgcattctaaagtggctgcagttcatagatatgaggttagcagagttacagctcgactctttgttgggattggaaagggtcagctgttggcttccaaggacgtgaggttcttgcttttgcgtacatggttggtgccattttatgatgattttggatggatgaggagggcatcaaaaggccttgataggcacttgattgaggatggtctgagcaacacaattcttaccctgcctttagcatggcaacaagaaattttgcttgcttggtttaatcggttcttgaactctggtgaagattgcccaaatatacaaagaggatttgaagtttggtggaggcggtccttttggaggcggaatggggagcaggaaagaccacggccattacgaattacagcagcaaccattgagaagcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB

Protein Analysis

615

Amino Acids

69.02

Weight (kDa)

7.65

Isoelectric Point (pI)

59.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 369 - 594 4.6e-64 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013310)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G63850
fragaria_vesca FvH4_5g02930 FvH4_5g02930
malus_domestica MD06G1088400.v1.1 MD14G1109500.v1.1
prunus_persica Prupe.5G104400_v2.0.a1
pyrus_communis pycom06g08440 pycom14g10360
rosa_chinensis RchiOBHm_Chr7g0196961
rosa_laevigata RLG00000003977
rosa_multiflora Rmu_sc0001083.1_g000006
rosa_roxburghii Rroxscaffold_3G00258800
rosa_rugosa Rorug07G0037000
rosa_samantha Rh7AG161400 Rh7BG163600 Rh7CG169600 Rh7DG162900
rosa_wichuraiana Rw7G014120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 737
AccB1I GGYRCC 2 cut(s) 967, 1564
AccII CGCG 4 cut(s) 412, 500, 698, 1167
AccIII TCCGGA 1 cut(s) 1224
AclWI GGATC 4 cut(s) 256, 269, 475, 858
AcoI YGGCCR 3 cut(s) 441, 459, 1808
AcsI RAATTY 3 cut(s) 235, 1204, 1683
AcyI GRCGYC 4 cut(s) 88, 495, 758, 968
AfaI GTAC 5 cut(s) 25, 779, 956, 1241, 1555
AfiI CCNNNNNNNGG 4 cut(s) 217, 295, 654, 1779
AhlI ACTAGT 1 cut(s) 20
AjiI CACGTC 2 cut(s) 808, 1534
AjnI CCWGG 2 cut(s) 149, 534
AjuI GAANNNNNNNTTGG 2 cut(s) 641, 673
AloI GAACNNNNNNTCC 2 cut(s) 1523, 1555
Alw21I GWGCWC 2 cut(s) 207, 647
Alw26I GTCTC 4 cut(s) 139, 670, 856, 1215
AlwI GGATC 4 cut(s) 256, 269, 475, 858
AlwNI CAGNNNCTG 1 cut(s) 550
Ama87I CYCGRG 4 cut(s) 140, 343, 593, 1287
Aor13HI TCCGGA 1 cut(s) 1224
AoxI GGCC 4 cut(s) 441, 459, 1609, 1808
ApoI RAATTY 3 cut(s) 235, 1204, 1683
ArsI GACNNNNNNTTYG 2 cut(s) 748, 780
Asp700I GAANNNNTTC 1 cut(s) 602
AspLEI GCGC 5 cut(s) 502, 550, 700, 970, 1167
AspS9I GGNCC 4 cut(s) 414, 532, 571, 1770
AsuC2I CCSGG 6 cut(s) 109, 212, 276, 586, 594, 595
AsuHPI GGTGA 3 cut(s) 47, 1195, 1733
AsuII TTCGAA 1 cut(s) 432
AvaI CYCGRG 4 cut(s) 140, 343, 593, 1287
AvaII GGWCC 4 cut(s) 414, 532, 571, 1770
BalI TGGCCA 2 cut(s) 443, 461
BamHI GGATCC 1 cut(s) 261
BanI GGYRCC 2 cut(s) 967, 1564
BanII GRGCYC 4 cut(s) 207, 453, 593, 647
BbsI GAAGAC 1 cut(s) 756
Bbv12I GWGCWC 2 cut(s) 207, 647
BbvCI CCTCAGC 2 cut(s) 978, 1386
BccI CCATC 6 cut(s) 69, 235, 433, 1247, 1581, 1628
BceAI ACGGC 7 cut(s) 229, 508, 701, 745, 760, 955, 1823
BcgI CGANNNNNNTGC 2 cut(s) 658, 692
BciT130I CCWGG 2 cut(s) 151, 536
BcnI CCSGG 6 cut(s) 109, 212, 276, 586, 594, 595
BcoDI GTCTC 4 cut(s) 139, 670, 856, 1215
BcuI ACTAGT 1 cut(s) 20
BfaI CTAG 1 cut(s) 21
BfmI CTRYAG 1 cut(s) 1449
BfoI RGCGCY 2 cut(s) 551, 971
BglI GCCNNNNNGGC 1 cut(s) 198
BmcAI AGTACT 2 cut(s) 25, 956
Bme1390I CCNGG 8 cut(s) 109, 151, 212, 276, 536, 586, 594, 595
Bme18I GGWCC 4 cut(s) 414, 532, 571, 1770
BmeT110I CYCGRG 4 cut(s) 140, 343, 593, 1287
BmgBI CACGTC 2 cut(s) 808, 1534
BmgT120I GGNCC 4 cut(s) 414, 532, 571, 1770
BmiI GGNNCC 6 cut(s) 263, 583, 590, 599, 969, 1566
BmrFI CCNGG 8 cut(s) 109, 151, 212, 276, 536, 586, 594, 595
BmrI ACTGGG 1 cut(s) 284
BmsI GCATC 6 cut(s) 546, 919, 1010, 1182, 1418, 1610
BmuI ACTGGG 1 cut(s) 284
BoxI GACNNNNGTC 1 cut(s) 131
BpiI GAAGAC 1 cut(s) 756
BplI GAGNNNNNCTC 4 cut(s) 337, 369, 502, 534
Bpu10I CCTNAGC 2 cut(s) 978, 1386
Bpu14I TTCGAA 1 cut(s) 432
BpuMI CCSGG 6 cut(s) 109, 212, 276, 586, 594, 595
BsaBI GATNNNNATC 1 cut(s) 692
BsaHI GRCGYC 4 cut(s) 88, 495, 758, 968
BsaWI WCCGGW 2 cut(s) 264, 1224
Bsc4I CCNNNNNNNGG 4 cut(s) 217, 295, 654, 1779
Bse118I RCCGGY 1 cut(s) 705
Bse1I ACTGG 2 cut(s) 290, 601
Bse8I GATNNNNATC 1 cut(s) 692
BseAI TCCGGA 1 cut(s) 1224
BseBI CCWGG 2 cut(s) 151, 536
BseGI GGATG 5 cut(s) 1156, 1318, 1592, 1596, 1639
BseJI GATNNNNATC 1 cut(s) 692
BseLI CCNNNNNNNGG 4 cut(s) 217, 295, 654, 1779
BseMII CTCAG 6 cut(s) 845, 969, 1077, 1377, 1410, 1631
BseNI ACTGG 2 cut(s) 290, 601
BseRI GAGGAG 3 cut(s) 1004, 1103, 1609
BseYI CCCAGC 1 cut(s) 1040
BsgI GTGCAG 1 cut(s) 662
Bsh1236I CGCG 4 cut(s) 412, 500, 698, 1167
BshFI GGCC 4 cut(s) 443, 461, 1611, 1810
BshNI GGYRCC 2 cut(s) 967, 1564
BsiHKAI GWGCWC 2 cut(s) 207, 647
BsiHKCI CYCGRG 4 cut(s) 140, 343, 593, 1287
BsiSI CCGG 9 cut(s) 109, 212, 265, 275, 308, 586, 594, 706, 1225
BslFI GGGAC 2 cut(s) 1096, 1332
BslI CCNNNNNNNGG 4 cut(s) 217, 295, 654, 1779
BsmAI GTCTC 4 cut(s) 139, 670, 856, 1215
BsmBI CGTCTC 2 cut(s) 670, 1215
BsmFI GGGAC 2 cut(s) 1096, 1332
BsmI GAATGC 1 cut(s) 1435
BsnI GGCC 4 cut(s) 443, 461, 1611, 1810
BsoBI CYCGRG 4 cut(s) 140, 343, 593, 1287
Bsp119I TTCGAA 1 cut(s) 432
Bsp1286I GDGCHC 4 cut(s) 207, 453, 593, 647
Bsp13I TCCGGA 1 cut(s) 1224
Bsp143I GATC 3 cut(s) 261, 480, 850
BspANI GGCC 4 cut(s) 443, 461, 1611, 1810
BspCNI CTCAG 6 cut(s) 846, 970, 1078, 1378, 1411, 1632
BspEI TCCGGA 1 cut(s) 1224
BspFNI CGCG 4 cut(s) 412, 500, 698, 1167
BspLI GGNNCC 6 cut(s) 263, 583, 590, 599, 969, 1566
BspMAI CTGCAG 1 cut(s) 1453
BspPI GGATC 4 cut(s) 256, 269, 475, 858
BspT104I TTCGAA 1 cut(s) 432
BspT107I GGYRCC 2 cut(s) 967, 1564
BsrFI RCCGGY 1 cut(s) 705
BsrI ACTGG 2 cut(s) 290, 601
BssAI RCCGGY 1 cut(s) 705
BssMI GATC 3 cut(s) 261, 480, 850
BssNI GRCGYC 4 cut(s) 88, 495, 758, 968
BssT1I CCWWGG 2 cut(s) 648, 1527
Bst2UI CCWGG 2 cut(s) 151, 536
Bst4CI ACNGT 4 cut(s) 323, 623, 683, 800
Bst6I CTCTTC 4 cut(s) 434, 854, 981, 1049
BstACI GRCGYC 4 cut(s) 88, 495, 758, 968
BstBI TTCGAA 1 cut(s) 432
BstC8I GCNNGC 6 cut(s) 203, 445, 449, 546, 1335, 1692
BstDEI CTNAG 7 cut(s) 854, 978, 1086, 1188, 1386, 1419, 1640
BstDSI CCRYGG 3 cut(s) 410, 971, 1805
BstENI CCTNNNNNAGG 1 cut(s) 1777
BstF5I GGATG 5 cut(s) 1156, 1318, 1592, 1596, 1639
BstFNI CGCG 4 cut(s) 412, 500, 698, 1167
BstH2I RGCGCY 2 cut(s) 551, 971
BstHHI GCGC 5 cut(s) 502, 550, 700, 970, 1167
BstKTI GATC 3 cut(s) 264, 483, 853
BstMAI GTCTC 4 cut(s) 139, 670, 856, 1215
BstMBI GATC 3 cut(s) 261, 480, 850
BstNI CCWGG 2 cut(s) 151, 536
BstNSI RCATGY 1 cut(s) 1133
BstPAI GACNNNNGTC 1 cut(s) 131
BstSCI CCNGG 8 cut(s) 107, 149, 210, 274, 534, 584, 592, 593
BstSFI CTRYAG 1 cut(s) 1449
BstUI CGCG 4 cut(s) 412, 500, 698, 1167
BstV2I GAAGAC 1 cut(s) 756
BstX2I RGATCY 3 cut(s) 261, 480, 850
BstYI RGATCY 3 cut(s) 261, 480, 850
BsuRI GGCC 4 cut(s) 443, 461, 1611, 1810
BtgI CCRYGG 3 cut(s) 410, 971, 1805
BtgZI GCGATG 2 cut(s) 679, 987
BtrI CACGTC 2 cut(s) 808, 1534
BtsCI GGATG 5 cut(s) 1156, 1318, 1592, 1596, 1639
BtsIMutI CAGTG 1 cut(s) 628
Cac8I GCNNGC 6 cut(s) 203, 445, 449, 546, 1335, 1692
CaiI CAGNNNCTG 1 cut(s) 550
CfoI GCGC 5 cut(s) 502, 550, 700, 970, 1167
Cfr10I RCCGGY 1 cut(s) 705
Cfr13I GGNCC 4 cut(s) 414, 532, 571, 1770
Cfr42I CCGCGG 1 cut(s) 413
Cfr9I CCCGGG 1 cut(s) 593
CseI GACGC 4 cut(s) 96, 484, 652, 766
Csp6I GTAC 5 cut(s) 24, 778, 955, 1240, 1554
CviAII CATG 6 cut(s) 295, 523, 1130, 1404, 1557, 1671
CviQI GTAC 5 cut(s) 24, 778, 955, 1240, 1554
DdeI CTNAG 7 cut(s) 854, 978, 1086, 1188, 1386, 1419, 1640
DinI GGCGCC 1 cut(s) 969
DpnI GATC 3 cut(s) 263, 482, 852
DpnII GATC 3 cut(s) 261, 480, 850
DrdI GACNNNNNNGTC 1 cut(s) 737
DseDI GACNNNNNNGTC 1 cut(s) 737
EaeI YGGCCR 3 cut(s) 441, 459, 1808
Eam1104I CTCTTC 4 cut(s) 434, 854, 981, 1049
EarI CTCTTC 4 cut(s) 434, 854, 981, 1049
EciI GGCGGA 1 cut(s) 1798
Ecl136II GAGCTC 2 cut(s) 205, 645
Eco130I CCWWGG 2 cut(s) 648, 1527
Eco147I AGGCCT 1 cut(s) 1611
Eco24I GRGCYC 4 cut(s) 207, 453, 593, 647
Eco47I GGWCC 4 cut(s) 414, 532, 571, 1770
Eco53kI GAGCTC 2 cut(s) 205, 645
Eco88I CYCGRG 4 cut(s) 140, 343, 593, 1287
EcoICRI GAGCTC 2 cut(s) 205, 645
EcoNI CCTNNNNNAGG 1 cut(s) 1777
EcoRI GAATTC 2 cut(s) 235, 1204
EcoRII CCWGG 2 cut(s) 149, 534
EcoT14I CCWWGG 2 cut(s) 648, 1527
EcoT38I GRGCYC 4 cut(s) 207, 453, 593, 647
EgeI GGCGCC 1 cut(s) 969
EheI GGCGCC 1 cut(s) 969
ErhI CCWWGG 2 cut(s) 648, 1527
Esp3I CGTCTC 2 cut(s) 670, 1215
FaeI CATG 6 cut(s) 298, 526, 1133, 1407, 1560, 1674
FaqI GGGAC 2 cut(s) 1096, 1332
FatI CATG 6 cut(s) 294, 522, 1129, 1403, 1556, 1670
FauI CCCGC 5 cut(s) 129, 197, 370, 481, 555
FokI GGATG 5 cut(s) 1163, 1325, 1599, 1603, 1646
FriOI GRGCYC 4 cut(s) 207, 453, 593, 647
FspBI CTAG 1 cut(s) 21
GlaI GCGC 5 cut(s) 501, 549, 699, 969, 1166
GsaI CCCAGC 1 cut(s) 1044
HaeII RGCGCY 2 cut(s) 551, 971
HaeIII GGCC 4 cut(s) 443, 461, 1611, 1810
HapII CCGG 9 cut(s) 109, 212, 265, 275, 308, 586, 594, 706, 1225
HgaI GACGC 4 cut(s) 96, 484, 652, 766
HhaI GCGC 5 cut(s) 502, 550, 700, 970, 1167
Hin1I GRCGYC 4 cut(s) 88, 495, 758, 968
Hin1II CATG 6 cut(s) 298, 526, 1133, 1407, 1560, 1674
Hin6I GCGC 5 cut(s) 500, 548, 698, 968, 1165
HinP1I GCGC 5 cut(s) 500, 548, 698, 968, 1165
HindIII AAGCTT 1 cut(s) 1121
HinfI GANTC 6 cut(s) 332, 673, 688, 1232, 1430, 1488
HpaII CCGG 9 cut(s) 109, 212, 265, 275, 308, 586, 594, 706, 1225
HphI GGTGA 3 cut(s) 47, 1195, 1733
Hpy188I TCNGA 8 cut(s) 234, 571, 687, 730, 855, 1015, 1429, 1641
Hpy188III TCNNGA 8 cut(s) 178, 259, 667, 1139, 1199, 1225, 1396, 1711
Hpy99I CGWCG 7 cut(s) 130, 250, 253, 256, 500, 760, 772
HpyAV CCTTC 7 cut(s) 865, 898, 988, 1022, 1136, 1150, 1303
HpyCH4III ACNGT 4 cut(s) 323, 623, 683, 800
HpyCH4IV ACGT 4 cut(s) 638, 807, 879, 1533
HpyCH4V TGCA 7 cut(s) 559, 679, 1129, 1264, 1328, 1348, 1451
HpyF3I CTNAG 7 cut(s) 854, 978, 1086, 1188, 1386, 1419, 1640
HpySE526I ACGT 4 cut(s) 638, 807, 879, 1533
Hsp92I GRCGYC 4 cut(s) 88, 495, 758, 968
Hsp92II CATG 6 cut(s) 298, 526, 1133, 1407, 1560, 1674
HspAI GCGC 5 cut(s) 500, 548, 698, 968, 1165
KasI GGCGCC 1 cut(s) 967
Kpn2I TCCGGA 1 cut(s) 1224
KspI CCGCGG 1 cut(s) 413
Kzo9I GATC 3 cut(s) 261, 480, 850
LmnI GCTCC 6 cut(s) 279, 588, 650, 1015, 1037, 1792
LweI GCATC 6 cut(s) 546, 919, 1010, 1182, 1418, 1610
MaeI CTAG 1 cut(s) 21
MaeII ACGT 4 cut(s) 638, 807, 879, 1533
MaeIII GTNAC 4 cut(s) 323, 623, 1183, 1477
MalI GATC 3 cut(s) 263, 482, 852
MboI GATC 3 cut(s) 261, 480, 850
MboII GAAGA 8 cut(s) 421, 756, 871, 995, 998, 1066, 1118, 1736
MfeI CAATTG 2 cut(s) 918, 1265
MflI RGATCY 3 cut(s) 261, 480, 850
MhlI GDGCHC 4 cut(s) 207, 453, 593, 647
MlsI TGGCCA 2 cut(s) 443, 461
MluCI AATT 8 cut(s) 235, 918, 1204, 1265, 1342, 1650, 1683, 1818
MluNI TGGCCA 2 cut(s) 443, 461
Mly113I GGCGCC 1 cut(s) 968
MlyI GAGTC 3 cut(s) 682, 1241, 1482
MmeI TCCRAC 3 cut(s) 993, 1015, 1047
Mox20I TGGCCA 2 cut(s) 443, 461
MroI TCCGGA 1 cut(s) 1224
MroXI GAANNNNTTC 1 cut(s) 602
MscI TGGCCA 2 cut(s) 443, 461
MseI TTAA 1 cut(s) 1701
MslI CAYNNNNRTG 1 cut(s) 1461
Msp20I TGGCCA 2 cut(s) 443, 461
MspA1I CMGCKG 3 cut(s) 412, 562, 1516
MspI CCGG 9 cut(s) 109, 212, 265, 275, 308, 586, 594, 706, 1225
MspR9I CCNGG 8 cut(s) 109, 151, 212, 276, 536, 586, 594, 595
MunI CAATTG 2 cut(s) 918, 1265
Mva1269I GAATGC 1 cut(s) 1435
MvaI CCWGG 2 cut(s) 151, 536
MvnI CGCG 4 cut(s) 412, 500, 698, 1167
NarI GGCGCC 1 cut(s) 968
NciI CCSGG 6 cut(s) 109, 212, 276, 586, 594, 595
NdeII GATC 3 cut(s) 261, 480, 850
NlaIII CATG 6 cut(s) 298, 526, 1133, 1407, 1560, 1674
NlaIV GGNNCC 6 cut(s) 263, 583, 590, 599, 969, 1566
NmeAIII GCCGAG 3 cut(s) 218, 534, 1223
NmuCI GTSAC 3 cut(s) 323, 623, 1183
NspI RCATGY 1 cut(s) 1133
NspV TTCGAA 1 cut(s) 432
PaeR7I CTCGAG 1 cut(s) 343
PceI AGGCCT 1 cut(s) 1611
PcsI WCGNNNNNNNCGW 7 cut(s) 248, 327, 341, 660, 764, 773, 1813
PctI GAATGC 1 cut(s) 1435
PdmI GAANNNNTTC 1 cut(s) 602
PfeI GAWTC 3 cut(s) 332, 688, 1430
PflFI GACNNNGTC 1 cut(s) 760
PfoI TCCNGGA 2 cut(s) 534, 584
PleI GAGTC 3 cut(s) 681, 1240, 1482
PluTI GGCGCC 1 cut(s) 971
PpsI GAGTC 3 cut(s) 681, 1240, 1482
PshAI GACNNNNGTC 1 cut(s) 131
Psp124BI GAGCTC 2 cut(s) 207, 647
Psp6I CCWGG 2 cut(s) 149, 534
PspFI CCCAGC 1 cut(s) 1040
PspGI CCWGG 2 cut(s) 149, 534
PspN4I GGNNCC 6 cut(s) 263, 583, 590, 599, 969, 1566
PspPI GGNCC 4 cut(s) 414, 532, 571, 1770
PspXI VCTCGAGB 1 cut(s) 343
PstI CTGCAG 1 cut(s) 1453
PstNI CAGNNNCTG 1 cut(s) 550
PsuI RGATCY 3 cut(s) 261, 480, 850
PsyI GACNNNGTC 1 cut(s) 760
PvuII CAGCTG 1 cut(s) 1516
RsaI GTAC 5 cut(s) 25, 779, 956, 1241, 1555
RsaNI GTAC 5 cut(s) 24, 778, 955, 1240, 1554
RseI CAYNNNNRTG 1 cut(s) 1461
SacI GAGCTC 2 cut(s) 207, 647
SacII CCGCGG 1 cut(s) 413
SaqAI TTAA 1 cut(s) 1701
Sau3AI GATC 3 cut(s) 261, 480, 850
Sau96I GGNCC 4 cut(s) 414, 532, 571, 1770
ScaI AGTACT 2 cut(s) 25, 956
SchI GAGTC 3 cut(s) 682, 1241, 1482
ScrFI CCNGG 8 cut(s) 109, 151, 212, 276, 536, 586, 594, 595
SduI GDGCHC 4 cut(s) 207, 453, 593, 647
SfaNI GCATC 6 cut(s) 546, 919, 1010, 1182, 1418, 1610
SfcI CTRYAG 1 cut(s) 1449
SfoI GGCGCC 1 cut(s) 969
Sfr274I CTCGAG 1 cut(s) 343
Sfr303I CCGCGG 1 cut(s) 413
SfuI TTCGAA 1 cut(s) 432
SgrBI CCGCGG 1 cut(s) 413
SinI GGWCC 4 cut(s) 414, 532, 571, 1770
SlaI CTCGAG 1 cut(s) 343
SmaI CCCGGG 1 cut(s) 595
SmiMI CAYNNNNRTG 1 cut(s) 1461
SmlI CTYRAG 1 cut(s) 343
SmoI CTYRAG 1 cut(s) 343
SpeI ACTAGT 1 cut(s) 20
Sse9I AATT 8 cut(s) 235, 918, 1204, 1265, 1342, 1650, 1683, 1818
SseBI AGGCCT 1 cut(s) 1611
SspDI GGCGCC 1 cut(s) 967
SspMI CTAG 1 cut(s) 21
SstI GAGCTC 2 cut(s) 207, 647
StuI AGGCCT 1 cut(s) 1611
StyD4I CCNGG 8 cut(s) 107, 149, 210, 274, 534, 584, 592, 593
StyI CCWWGG 2 cut(s) 648, 1527
TaaI ACNGT 4 cut(s) 323, 623, 683, 800
TaiI ACGT 4 cut(s) 641, 810, 882, 1536
TaqI TCGA 6 cut(s) 117, 207, 344, 432, 668, 1486
TasI AATT 8 cut(s) 235, 918, 1204, 1265, 1342, 1650, 1683, 1818
TatI WGTACW 3 cut(s) 23, 954, 1239
TfiI GAWTC 3 cut(s) 332, 688, 1430
Tru1I TTAA 1 cut(s) 1701
Tru9I TTAA 1 cut(s) 1701
TscAI CASTG 1 cut(s) 628
TseFI GTSAC 3 cut(s) 323, 623, 1183
Tsp45I GTSAC 3 cut(s) 323, 623, 1183
TspDTI ATGAA 5 cut(s) 884, 1119, 1187, 1233, 1445
TspMI CCCGGG 1 cut(s) 593
TspRI CASTG 1 cut(s) 628
Tth111I GACNNNGTC 1 cut(s) 760
VpaK11BI GGWCC 4 cut(s) 414, 532, 571, 1770
XagI CCTNNNNNAGG 1 cut(s) 1777
XapI RAATTY 3 cut(s) 235, 1204, 1683
XceI RCATGY 1 cut(s) 1133
XhoI CTCGAG 1 cut(s) 343
XmaI CCCGGG 1 cut(s) 593
XmnI GAANNNNTTC 1 cut(s) 602
XspI CTAG 1 cut(s) 21
ZrmI AGTACT 2 cut(s) 25, 956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.