Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002021.1

Orthogroup ID

OG0015459

Physical Location & Seq

Genomic Coordinates Reverse (-)

10155 .. 16021

Gene Structure 5867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

atgttcctccttcgtaaaatcccccacaaaccccaaaattccaaatcaatcctcaccgtcgccgcccgtttctgcacaacccaaatccctaccgtaaattcttttcccgatgagcccaccgccgcctactacgacctcctggtcaacgccgccggcgaatcccgagacttcgccaacctccagtacctcctcaacaagcgcgtgaaggaccactgcttcaacacctccaacaccttcaagttcatcaccaacaccggggcttccctctccgtactccccgatatctctcggaccctcgcgcgtctcgacaaagggttcacgcgcaagagcgcgtacgactcgctcatctcccgcctctgcaagctggagctagtcgaggaggcgctgcgcgtggtggacctgatggcgcgtgagaatttcggcctgaacgcgtgtaccttccacccgattctcaacgtgcttacaaagaaggggaagatggaagaggcgtggcgcgtggtggagctgatgaggaaatccggagctccgccggatctcacgtcgtataattatcttctcatggcgtattgcttctccggagatttggatccggcggccggagttttgtgtactatggaggaggaggggatgaaggcggacacgcgtacgttcgacgcgctggtgcttggcgcgtgcaaggtggggcaggtggagggggctatggtgctgctgaggaggatggtggatgatggagttccggtgctgctatcgacccacgtgtacgttattgattcgctcttgagtcgggggttttacgcggaagcggtaaagtttgtgaggggttttagcgggaaggacacttggttggacaaggagagttttgggagtctggctaagaggctcattaagctcgagaggcttggtgaggcgaaggaggtcttggatgaaatgcgtgaaaggggatcaacccctacaccattgaatagtgcaccgggttgcaatagcaaatccgcacccaacctcgcgtccttcccctcatcaccagcaaacaatctcatcttttcgcagtctgatcttaggaacattgacaccatttccggtcgcctaccaccgaaccagcgctacccttacctgaaaggaactccaagagatttgaacagcacagcaataaccacgcagccttcaatcctgctgggcgcacttcgaaaacacctatcactggacacgaggtccatttcgcccaagagcccagaagcccaagccgctgacatcatctcagccacggcagcgtccagtcagcctgccacgtcagcatcagacgccatgtcagcactcggcaaccacgtcagcacctgcggtcaacgccggtcaacccttttccggatgagtaacctgaaaaaattggactttgctccattgggaacaactggctctgaatatcacaggtgggttcgtgatatccgccagcatctcaaggccgatggaatcttggatacgattctcgagcctagccaggacttgctaactgttgggcaaacttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

506

Amino Acids

55.62

Weight (kDa)

8.91

Isoelectric Point (pI)

41.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	108 - 200	4.2e-09	Fungal tetratrico peptide repeats
PPR_long	PF17177	125 - 242	6.1e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	130 - 189	4.6e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	143 - 186	4.3e-08	PPR repeat family
PPR_2	PF13041	177 - 226	1.5e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015459)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40240 AT3G56030
fragaria_vesca	FvH4_7g24790
pyrus_communis	pycom01g17280
rosa_chinensis	RchiOBHm_Chr1g0370651
rosa_laevigata	RLG00000027021
rosa_multiflora	Rmu_sc0002021.1_g000005 Rmu_sc0003210.1_g000001 Rmu_sc0004550.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286370
rosa_rugosa	Rorug01G0358100
rosa_samantha	Rh1AG367800 Rh1BG331300 Rh1CG345400 Rh1DG362700
rosa_wichuraiana	Rw1G032360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	676, 1340
AasI	GACNNNNNNGTC	1 cut(s)	140
Acc36I	ACCTGC	2 cut(s)	676, 1340
AccIII	TCCGGA	3 cut(s)	518, 575, 1359
AclWI	GGATC	4 cut(s)	540, 581, 594, 949
AcoI	YGGCCR	1 cut(s)	594
AcsI	RAATTY	3 cut(s)	37, 97, 415
AcvI	CACGTG	1 cut(s)	757
AcyI	GRCGYC	1 cut(s)	1299
AfaI	GTAC	7 cut(s)	185, 273, 335, 436, 610, 646, 761
AfeI	AGCGCT	1 cut(s)	1100
AfiI	CCNNNNNNNGG	4 cut(s)	255, 596, 1198, 1359
AflIII	ACRYGT	3 cut(s)	429, 641, 756
AgsI	TTSAA	5 cut(s)	220, 238, 961, 1135, 1164
AhdI	GACNNNNNGTC	2 cut(s)	1207, 1303
AjiI	CACGTC	3 cut(s)	540, 1287, 1324
AjnI	CCWGG	2 cut(s)	138, 1491
AjuI	GAANNNNNNNTTGG	2 cut(s)	902, 934
AluBI	AGCT	5 cut(s)	364, 370, 505, 524, 889
AluI	AGCT	5 cut(s)	364, 370, 505, 524, 889
Alw21I	GWGCWC	2 cut(s)	526, 970
Alw26I	GTCTC	2 cut(s)	159, 308
Alw44I	GTGCAC	1 cut(s)	966
AlwI	GGATC	4 cut(s)	540, 581, 594, 949
AlwNI	CAGNNNCTG	1 cut(s)	1332
Ama87I	CYCGRG	3 cut(s)	162, 890, 1481
Aor13HI	TCCGGA	3 cut(s)	518, 575, 1359
Aor51HI	AGCGCT	1 cut(s)	1100
AoxI	GGCC	3 cut(s)	421, 594, 1455
ApaLI	GTGCAC	1 cut(s)	966
ApeKI	GCWGC	5 cut(s)	385, 706, 742, 1156, 1265
ApoI	RAATTY	3 cut(s)	37, 97, 415
AspS9I	GGNCC	4 cut(s)	208, 291, 397, 1209
AsuC2I	CCSGG	2 cut(s)	256, 972
AsuHPI	GGTGA	4 cut(s)	46, 238, 914, 1011
AsuII	TTCGAA	1 cut(s)	1183
AvaI	CYCGRG	3 cut(s)	162, 890, 1481
AvaII	GGWCC	4 cut(s)	208, 291, 397, 1209
BaeGI	GKGCMC	1 cut(s)	970
BaeI	ACNNNNGTAYC	2 cut(s)	418, 451
BamHI	GGATCC	1 cut(s)	586
BanII	GRGCYC	3 cut(s)	117, 526, 1229
BauI	CACGAG	1 cut(s)	1204
BbrPI	CACGTG	1 cut(s)	757
Bbv12I	GWGCWC	2 cut(s)	526, 970
BbvCI	CCTCAGC	1 cut(s)	710
BbvI	GCAGC	5 cut(s)	372, 693, 729, 1168, 1277
BccI	CCATC	5 cut(s)	397, 472, 712, 722, 1454
BceAI	ACGGC	1 cut(s)	1278
BciT130I	CCWGG	2 cut(s)	140, 1493
BciVI	GTATCC	1 cut(s)	1465
BcnI	CCSGG	2 cut(s)	256, 972
BcoDI	GTCTC	2 cut(s)	159, 308
BfaI	CTAG	2 cut(s)	371, 1488
BfoI	RGCGCY	2 cut(s)	386, 1102
BfuAI	ACCTGC	2 cut(s)	676, 1340
BfuI	GTATCC	1 cut(s)	1465
Bme1390I	CCNGG	4 cut(s)	140, 256, 972, 1493
Bme18I	GGWCC	4 cut(s)	208, 291, 397, 1209
BmeRI	GACNNNNNGTC	2 cut(s)	1207, 1303
BmeT110I	CYCGRG	3 cut(s)	162, 890, 1481
BmgBI	CACGTC	3 cut(s)	540, 1287, 1324
BmgT120I	GGNCC	4 cut(s)	208, 291, 397, 1209
BmiI	GGNNCC	2 cut(s)	293, 588
BmrFI	CCNGG	4 cut(s)	140, 256, 972, 1493
BmsI	GCATC	2 cut(s)	1301, 1456
BpmI	CTGGAG	2 cut(s)	164, 386
Bpu10I	CCTNAGC	1 cut(s)	710
Bpu14I	TTCGAA	1 cut(s)	1183
BpuEI	CTTGAG	2 cut(s)	799, 1436
BpuMI	CCSGG	2 cut(s)	256, 972
BsaAI	YACGTR	1 cut(s)	757
BsaBI	GATNNNNATC	1 cut(s)	585
BsaHI	GRCGYC	1 cut(s)	1299
BsaJI	CCNNGG	2 cut(s)	255, 1260
BsaWI	WCCGGW	5 cut(s)	518, 575, 736, 1076, 1359
BsaXI	ACNNNNNCTCC	2 cut(s)	723, 753
Bsc4I	CCNNNNNNNGG	4 cut(s)	255, 596, 1198, 1359
Bse118I	RCCGGY	2 cut(s)	152, 1344
Bse1I	ACTGG	4 cut(s)	181, 1203, 1272, 1411
Bse8I	GATNNNNATC	1 cut(s)	585
BseAI	TCCGGA	3 cut(s)	518, 575, 1359
BseBI	CCWGG	2 cut(s)	140, 1493
BseDI	CCNNGG	2 cut(s)	255, 1260
BseGI	GGATG	5 cut(s)	633, 723, 730, 928, 1368
BseJI	GATNNNNATC	1 cut(s)	585
BseLI	CCNNNNNNNGG	4 cut(s)	255, 596, 1198, 1359
BseMII	CTCAG	2 cut(s)	701, 1269
BseNI	ACTGG	4 cut(s)	181, 1203, 1272, 1411
BseRI	GAGGAG	5 cut(s)	179, 392, 632, 635, 727
BseSI	GKGCMC	1 cut(s)	970
BseX3I	CGGCCG	1 cut(s)	594
BseXI	GCAGC	5 cut(s)	372, 693, 729, 1168, 1277
BseYI	CCCAGC	1 cut(s)	1171
BsgI	GTGCAG	1 cut(s)	58
Bsh1285I	CGRYCG	2 cut(s)	597, 1081
BshFI	GGCC	3 cut(s)	423, 596, 1457
BsiEI	CGRYCG	2 cut(s)	597, 1081
BsiHKAI	GWGCWC	2 cut(s)	526, 970
BsiHKCI	CYCGRG	3 cut(s)	162, 890, 1481
BsiWI	CGTACG	2 cut(s)	333, 644
BslI	CCNNNNNNNGG	4 cut(s)	255, 596, 1198, 1359
BsmAI	GTCTC	2 cut(s)	159, 308
BsmBI	CGTCTC	1 cut(s)	308
BsnI	GGCC	3 cut(s)	423, 596, 1457
BsoBI	CYCGRG	3 cut(s)	162, 890, 1481
Bsp119I	TTCGAA	1 cut(s)	1183
Bsp1286I	GDGCHC	4 cut(s)	117, 526, 970, 1229
Bsp13I	TCCGGA	3 cut(s)	518, 575, 1359
Bsp143I	GATC	4 cut(s)	532, 586, 941, 1051
BspANI	GGCC	3 cut(s)	423, 596, 1457
BspCNI	CTCAG	2 cut(s)	702, 1268
BspEI	TCCGGA	3 cut(s)	518, 575, 1359
BspLI	GGNNCC	2 cut(s)	293, 588
BspMI	ACCTGC	2 cut(s)	676, 1340
BspPI	GGATC	4 cut(s)	540, 581, 594, 949
BspT104I	TTCGAA	1 cut(s)	1183
BsrFI	RCCGGY	2 cut(s)	152, 1344
BsrI	ACTGG	4 cut(s)	181, 1203, 1272, 1411
BssAI	RCCGGY	2 cut(s)	152, 1344
BssECI	CCNNGG	2 cut(s)	255, 1260
BssMI	GATC	4 cut(s)	532, 586, 941, 1051
BssNI	GRCGYC	1 cut(s)	1299
BssSI	CACGAG	1 cut(s)	1204
Bst2BI	CACGAG	1 cut(s)	1204
Bst2UI	CCWGG	2 cut(s)	140, 1493
Bst4CI	ACNGT	3 cut(s)	58, 94, 1507
Bst6I	CTCTTC	1 cut(s)	477
BstACI	GRCGYC	1 cut(s)	1299
BstBAI	YACGTR	1 cut(s)	757
BstBI	TTCGAA	1 cut(s)	1183
BstC8I	GCNNGC	5 cut(s)	154, 362, 673, 1281, 1445
BstDEI	CTNAG	4 cut(s)	710, 873, 1055, 1255
BstDSI	CCRYGG	1 cut(s)	1260
BstF5I	GGATG	5 cut(s)	633, 723, 730, 928, 1368
BstH2I	RGCGCY	2 cut(s)	386, 1102
BstKTI	GATC	4 cut(s)	535, 589, 944, 1054
BstMAI	GTCTC	2 cut(s)	159, 308
BstMBI	GATC	4 cut(s)	532, 586, 941, 1051
BstMCI	CGRYCG	2 cut(s)	597, 1081
BstMWI	GCNNNNNNNGC	8 cut(s)	886, 895, 1241, 1265, 1289, 1298, 1307, 1341
BstNI	CCWGG	2 cut(s)	140, 1493
BstSCI	CCNGG	4 cut(s)	138, 254, 970, 1491
BstSLI	GKGCMC	1 cut(s)	970
BstV1I	GCAGC	5 cut(s)	372, 693, 729, 1168, 1277
BstX2I	RGATCY	2 cut(s)	532, 586
BstYI	RGATCY	2 cut(s)	532, 586
BstZI	CGGCCG	1 cut(s)	594
BsuI	GTATCC	1 cut(s)	1465
BsuRI	GGCC	3 cut(s)	423, 596, 1457
BtgI	CCRYGG	1 cut(s)	1260
BtrI	CACGTC	3 cut(s)	540, 1287, 1324
BtsCI	GGATG	5 cut(s)	633, 723, 730, 928, 1368
BtsI	GCAGTG	1 cut(s)	211
BtsIMutI	CAGTG	2 cut(s)	211, 1196
BveI	ACCTGC	2 cut(s)	676, 1340
Cac8I	GCNNGC	5 cut(s)	154, 362, 673, 1281, 1445
CaiI	CAGNNNCTG	1 cut(s)	1332
Cfr10I	RCCGGY	2 cut(s)	152, 1344
Cfr13I	GGNCC	4 cut(s)	208, 291, 397, 1209
CseI	GACGC	5 cut(s)	290, 662, 993, 1257, 1307
Csp6I	GTAC	7 cut(s)	184, 272, 334, 435, 609, 645, 760
CviAII	CATG	2 cut(s)	559, 1303
CviQI	GTAC	7 cut(s)	184, 272, 334, 435, 609, 645, 760
DdeI	CTNAG	4 cut(s)	710, 873, 1055, 1255
DpnI	GATC	4 cut(s)	534, 588, 943, 1053
DpnII	GATC	4 cut(s)	532, 586, 941, 1051
DrdI	GACNNNNNNGTC	1 cut(s)	140
DriI	GACNNNNNGTC	2 cut(s)	1207, 1303
DseDI	GACNNNNNNGTC	1 cut(s)	140
EaeI	YGGCCR	1 cut(s)	594
EagI	CGGCCG	1 cut(s)	594
Eam1104I	CTCTTC	1 cut(s)	477
Eam1105I	GACNNNNNGTC	2 cut(s)	1207, 1303
EarI	CTCTTC	1 cut(s)	477
EciI	GGCGGA	3 cut(s)	516, 650, 1430
Ecl136II	GAGCTC	1 cut(s)	524
EclXI	CGGCCG	1 cut(s)	594
Eco24I	GRGCYC	3 cut(s)	117, 526, 1229
Eco32I	GATATC	2 cut(s)	283, 1438
Eco47I	GGWCC	4 cut(s)	208, 291, 397, 1209
Eco47III	AGCGCT	1 cut(s)	1100
Eco52I	CGGCCG	1 cut(s)	594
Eco53kI	GAGCTC	1 cut(s)	524
Eco72I	CACGTG	1 cut(s)	757
Eco88I	CYCGRG	3 cut(s)	162, 890, 1481
EcoICRI	GAGCTC	1 cut(s)	524
EcoRII	CCWGG	2 cut(s)	138, 1491
EcoRV	GATATC	2 cut(s)	283, 1438
EcoT38I	GRGCYC	3 cut(s)	117, 526, 1229
Esp3I	CGTCTC	1 cut(s)	308
FaeI	CATG	2 cut(s)	562, 1306
FaiI	YATR	5 cut(s)	546, 560, 614, 701, 1304
FalI	AAGNNNNNCTT	2 cut(s)	902, 934
FatI	CATG	2 cut(s)	558, 1302
FauI	CCCGC	2 cut(s)	359, 821
FokI	GGATG	5 cut(s)	640, 730, 737, 935, 1375
FriOI	GRGCYC	3 cut(s)	117, 526, 1229
FspBI	CTAG	2 cut(s)	371, 1488
GsaI	CCCAGC	1 cut(s)	1175
GsuI	CTGGAG	2 cut(s)	164, 386
HaeII	RGCGCY	2 cut(s)	386, 1102
HaeIII	GGCC	3 cut(s)	423, 596, 1457
HgaI	GACGC	5 cut(s)	290, 662, 993, 1257, 1307
Hin1I	GRCGYC	1 cut(s)	1299
Hin1II	CATG	2 cut(s)	562, 1306
HincII	GTYRAC	3 cut(s)	145, 1340, 1350
HindII	GTYRAC	3 cut(s)	145, 1340, 1350
HinfI	GANTC	8 cut(s)	158, 338, 448, 770, 781, 865, 1464, 1477
HphI	GGTGA	4 cut(s)	46, 238, 914, 1011
Hpy166II	GTNNAC	9 cut(s)	145, 318, 397, 435, 609, 760, 968, 1340, 1350
Hpy188I	TCNGA	4 cut(s)	291, 1051, 1297, 1414
Hpy8I	GTNNAC	9 cut(s)	145, 318, 397, 435, 609, 760, 968, 1340, 1350
Hpy99I	CGWCG	3 cut(s)	62, 544, 656
HpyCH4III	ACNGT	3 cut(s)	58, 94, 1507
HpyCH4IV	ACGT	7 cut(s)	456, 539, 647, 756, 762, 1286, 1323
HpyCH4V	TGCA	5 cut(s)	75, 360, 675, 968, 978
HpyF10VI	GCNNNNNNNGC	8 cut(s)	886, 895, 1241, 1265, 1289, 1298, 1307, 1341
HpyF3I	CTNAG	4 cut(s)	710, 873, 1055, 1255
HpySE526I	ACGT	7 cut(s)	456, 539, 647, 756, 762, 1286, 1323
Hsp92I	GRCGYC	1 cut(s)	1299
Hsp92II	CATG	2 cut(s)	562, 1306
Kpn2I	TCCGGA	3 cut(s)	518, 575, 1359
KroI	GCCGGC	1 cut(s)	152
KroNI	GCCGGC	1 cut(s)	154
Kzo9I	GATC	4 cut(s)	532, 586, 941, 1051
LmnI	GCTCC	5 cut(s)	367, 502, 521, 529, 1396
Lsp1109I	GCAGC	5 cut(s)	372, 693, 729, 1168, 1277
LweI	GCATC	2 cut(s)	1301, 1456
MaeI	CTAG	2 cut(s)	371, 1488
MaeII	ACGT	7 cut(s)	456, 539, 647, 756, 762, 1286, 1323
MaeIII	GTNAC	1 cut(s)	1367
MalI	GATC	4 cut(s)	534, 588, 943, 1053
MboI	GATC	4 cut(s)	532, 586, 941, 1051
MboII	GAAGA	3 cut(s)	487, 494, 545
MflI	RGATCY	2 cut(s)	532, 586
MhlI	GDGCHC	4 cut(s)	117, 526, 970, 1229
MluCI	AATT	5 cut(s)	37, 97, 415, 547, 1379
MluI	ACGCGT	2 cut(s)	429, 641
MlyI	GAGTC	3 cut(s)	332, 790, 874
MmeI	TCCRAC	2 cut(s)	252, 825
MreI	CGCCGGCG	1 cut(s)	152
MroI	TCCGGA	3 cut(s)	518, 575, 1359
MroNI	GCCGGC	1 cut(s)	152
MseI	TTAA	2 cut(s)	885, 1519
MspA1I	CMGCKG	1 cut(s)	1244
MspR9I	CCNGG	4 cut(s)	140, 256, 972, 1493
MteI	GCGCNGCGC	1 cut(s)	386
MvaI	CCWGG	2 cut(s)	140, 1493
MwoI	GCNNNNNNNGC	8 cut(s)	886, 895, 1241, 1265, 1289, 1298, 1307, 1341
NaeI	GCCGGC	1 cut(s)	154
NciI	CCSGG	2 cut(s)	256, 972
NdeII	GATC	4 cut(s)	532, 586, 941, 1051
NgoMIV	GCCGGC	1 cut(s)	152
NlaIII	CATG	2 cut(s)	562, 1306
NlaIV	GGNNCC	2 cut(s)	293, 588
NmeAIII	GCCGAG	1 cut(s)	1293
NspV	TTCGAA	1 cut(s)	1183
PaeR7I	CTCGAG	2 cut(s)	890, 1481
PaqCI	CACCTGC	2 cut(s)	676, 1340
PcsI	WCGNNNNNNNCGW	3 cut(s)	153, 303, 1320
PdiI	GCCGGC	1 cut(s)	154
PfeI	GAWTC	5 cut(s)	158, 448, 770, 1464, 1477
Pfl23II	CGTACG	2 cut(s)	333, 644
PleI	GAGTC	3 cut(s)	332, 789, 873
PmaCI	CACGTG	1 cut(s)	757
PmlI	CACGTG	1 cut(s)	757
PpsI	GAGTC	3 cut(s)	332, 789, 873
Ppu21I	YACGTR	1 cut(s)	757
Psp124BI	GAGCTC	1 cut(s)	526
Psp6I	CCWGG	2 cut(s)	138, 1491
PspCI	CACGTG	1 cut(s)	757
PspFI	CCCAGC	1 cut(s)	1171
PspGI	CCWGG	2 cut(s)	138, 1491
PspLI	CGTACG	2 cut(s)	333, 644
PspN4I	GGNNCC	2 cut(s)	293, 588
PspPI	GGNCC	4 cut(s)	208, 291, 397, 1209
PsrI	GAACNNNNNNTAC	2 cut(s)	1085, 1117
PstNI	CAGNNNCTG	1 cut(s)	1332
PsuI	RGATCY	2 cut(s)	532, 586
RsaI	GTAC	7 cut(s)	185, 273, 335, 436, 610, 646, 761
RsaNI	GTAC	7 cut(s)	184, 272, 334, 435, 609, 645, 760
SacI	GAGCTC	1 cut(s)	526
SaqAI	TTAA	2 cut(s)	885, 1519
Sau3AI	GATC	4 cut(s)	532, 586, 941, 1051
Sau96I	GGNCC	4 cut(s)	208, 291, 397, 1209
SchI	GAGTC	3 cut(s)	332, 790, 874
ScrFI	CCNGG	4 cut(s)	140, 256, 972, 1493
SduI	GDGCHC	4 cut(s)	117, 526, 970, 1229
SfaNI	GCATC	2 cut(s)	1301, 1456
Sfr274I	CTCGAG	2 cut(s)	890, 1481
SfuI	TTCGAA	1 cut(s)	1183
SgrAI	CRCCGGYG	1 cut(s)	152
SinI	GGWCC	4 cut(s)	208, 291, 397, 1209
SlaI	CTCGAG	2 cut(s)	890, 1481
SmlI	CTYRAG	4 cut(s)	778, 890, 1451, 1481
SmoI	CTYRAG	4 cut(s)	778, 890, 1451, 1481
Sse9I	AATT	5 cut(s)	37, 97, 415, 547, 1379
SspMI	CTAG	2 cut(s)	371, 1488
SstI	GAGCTC	1 cut(s)	526
StyD4I	CCNGG	4 cut(s)	138, 254, 970, 1491
TaaI	ACNGT	3 cut(s)	58, 94, 1507
TaiI	ACGT	7 cut(s)	459, 542, 650, 759, 765, 1289, 1326
TaqI	TCGA	7 cut(s)	306, 375, 651, 749, 891, 1183, 1482
TasI	AATT	5 cut(s)	37, 97, 415, 547, 1379
TatI	WGTACW	1 cut(s)	608
TauI	GCSGC	5 cut(s)	65, 125, 152, 596, 1244
TfiI	GAWTC	5 cut(s)	158, 448, 770, 1464, 1477
Tru1I	TTAA	2 cut(s)	885, 1519
Tru9I	TTAA	2 cut(s)	885, 1519
TscAI	CASTG	2 cut(s)	218, 1203
TseI	GCWGC	5 cut(s)	385, 706, 742, 1156, 1265
TspDTI	ATGAA	3 cut(s)	232, 644, 939
TspGWI	ACGGA	1 cut(s)	259
TspRI	CASTG	2 cut(s)	218, 1203
VneI	GTGCAC	1 cut(s)	966
VpaK11BI	GGWCC	4 cut(s)	208, 291, 397, 1209
XapI	RAATTY	3 cut(s)	37, 97, 415
XhoI	CTCGAG	2 cut(s)	890, 1481
XspI	CTAG	2 cut(s)	371, 1488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.