Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002169.1

Orthogroup ID

OG0011079

Physical Location & Seq

Genomic Coordinates Reverse (-)

30893 .. 37550

Gene Structure 6658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002169.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2616 bp

atgcactccctctcatcccatgcgacgcgtcctctctcctcttccttctctcactccacctcctacttccgcttcatctccctctccctcccatttctccactctcccaaatcccaccccaaacttttcactatttccccaaaagcccccactttcacgatccggagcatctccgccaagccctcgtcggagctccgacccaagcgccccaattccgactccgactcaaagctccgagctctccgcgacctcttctccaagcccggcgtcggaatcgacgcttacatcattccctctcaggatgctcaccagagtgagttcattgctgaatgttatatgaggaggacctatatatctggtttcacagggagtgccggcactgctgttgtcactaaggataaagcagctctttggacagatggccgctattttcttcaggctgaaaagcagctgagttcgagttggattctcatgcgggctggtaattttggagtacctacaactattgaatggctgaatgatgttttggcccctggtgggagagttggcattgacccttttctgttttcttccgatgctgcagaagaattgaagcagggcatcgctaacaagaatcatgagttggtttttctgtatgataaaaatcttgtggatgaaatatggaaagaatcaagaccagagcctccaaaaaaaccaattagagtacacgaactgaaatatgctggtgcagatgtggcatcaaagttatcatctctgaggtctgaacttgttgcagctggttcatctgcaatagttatatccatgcttgacgaagttgcctggctgttgaatttgagaggaagtgatgttccacattcacctgttatgtatgcttatctgattgtggagatcgacaaagcaaagttatttgtagatacttccaaagtaggcactgaggtgttggatcacctggagaatgcgggtattgaattgaggccatatgactccattctttctgaagtagaaagtctggcagcaaaaggggctaaagtttggttggatgcatcatctgtgaatgcagctattgtccacacctacaacactgcttgtgagaaatattatgagagccttgaaagtaaaagaaaaagtaagactaaggaatataatgactcacatggttggtctgaaggacccactggaatgtatagggtgtcccctgtctctttggcaaaggcactgaaaaatgatgctgagttagaagggatgcggagttgtcatttaagggatgctgctgctttagcgcagttttgggtttggatcgaagagcaaatcaacaagaatgtgaaactaactgagggtcatatagctcttgatcaggcagtattccctgaaaacacaccaggttttgtcttagatgcattcgctcgttcttttctttggaagattggactggattaccgacatggaactgggcatggtgtgggagctgcattaaatgttcatgagggtcctcaaagtattagctttcgatttggaaatacaacttccttacagagtggtatgattgttagcaatgaacctggctattatgaagaccatgccttcggcattcggattgagaatctccttgttgtgaaagaagttgacacgccaaatcgttttggaggaattggatacctgggatttgaaaaactcacatatgttcccatccaggctaaattgatagacttgtctttgctttctggtgcggaatttgattggcttaatgattatcattcacaagtttgggacaaggtctcaccattgcttgatggtcctgcacgccaatggctttggaacaacacaagaccacttgtcaagcaaaccatttcgaaggacaatactaaagaagaccttgtcacagcaatgtcaaagaacaagaataaaggcatcaaggaagatcttgccacaagagtgtcgaagatgaagggtttggtggctcaggatctgagcaaactggatctaactcagttagatccactctcgccggaagttatatctcgtcaggccacgatcaacattggcacaataggtcacgtggctcatggtaagtcaacggtggtcaaagcaatttcgggggttcagacagttcgtttcaaacaggagctggagcgcaacataactataaaaacaggatatgctaatgccaaaatttacaagtgcggtagctgcccccgacccgactgctacaagtcttatggcagtggaaaggaagacaatcctctctgtgaacggtgtgggagtcagatgagactggagagacatgtgtcctttgtagattgccccggtcacgaagcactaatggctactatgcttaatggtgcgtccattatggatggagcgttacttgttgtagctgctgacgaacagtttccccaagaacaaaccaaggagcatctggaagctgttgaaatcatgtctcttaaacacaacattgtgcttcaaaacaaagttgaccttgtccgagagaaggcaatcgagcagcgagaggagatgaaggagtggtttcgtggcacggtagctgaagatgcaacaattgtgcctattgttgctcagctgaagtataatatcgatgtagtgaacgagtacattgtctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Creatinase_N Creatinase_N_2 Peptidase_M24 Peptidase_M24_C

Protein Analysis

871

Amino Acids

96.77

Weight (kDa)

6.52

Isoelectric Point (pI)

44.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05350
fragaria_vesca	FvH4_6g06000 FvH4_6g06000
malus_domestica	MD04G1205000.v1.1
prunus_persica	Prupe.6G325100_v2.0.a1 Prupe.6G325100_v2.0.a1 Prupe.6G325100_v2.0.a1
pyrus_communis	pycom04g18120
rosa_chinensis	RchiOBHm_Chr3g0454961
rosa_laevigata	RLG00000025398
rosa_multiflora	Rmu_sc0001792.1_g000001 Rmu_sc0002169.1_g000008
rosa_roxburghii	Rroxscaffold_6G00424650
rosa_rugosa	Rorug03G0003200 Rorug03G0003300
rosa_samantha	Rh3AG063100 Rh3BG065000 Rh3CG063900 Rh3DG065100
rosa_wichuraiana	Rw3G004950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	28, 246
AccIII	TCCGGA	1 cut(s)	162
AciI	CCGC	9 cut(s)	70, 174, 244, 424, 475, 959, 1246, 1727, 2181
AclWI	GGATC	6 cut(s)	154, 951, 1304, 1971, 1986, 1988
AcoI	YGGCCR	1 cut(s)	421
AcsI	RAATTY	3 cut(s)	829, 1730, 2169
AcuI	CTGAAG	5 cut(s)	419, 1017, 1185, 2562, 2597
AcvI	CACGTG	1 cut(s)	2056
AcyI	GRCGYC	1 cut(s)	267
AfaI	GTAC	3 cut(s)	495, 705, 2606
AfiI	CCNNNNNNNGG	3 cut(s)	269, 537, 2488
AflIII	ACRYGT	2 cut(s)	26, 2281
AgsI	TTSAA	9 cut(s)	509, 592, 829, 968, 1112, 1667, 2116, 2429, 2462
AhdI	GACNNNNNGTC	1 cut(s)	1832
AjnI	CCWGG	7 cut(s)	532, 818, 948, 1378, 1558, 1656, 1689
AjuI	GAANNNNNNNTTGG	4 cut(s)	509, 541, 605, 637
AleI	CACNNNNGTG	3 cut(s)	312, 935, 1931
AloI	GAACNNNNNNTCC	2 cut(s)	831, 863
Alw21I	GWGCWC	2 cut(s)	195, 241
Alw26I	GTCTC	5 cut(s)	1204, 1780, 2263, 2272, 2442
AlwI	GGATC	6 cut(s)	154, 951, 1304, 1971, 1986, 1988
AlwNI	CAGNNNCTG	2 cut(s)	1966, 2125
Aor13HI	TCCGGA	1 cut(s)	162
AoxI	GGCC	4 cut(s)	421, 528, 974, 2025
ApoI	RAATTY	3 cut(s)	829, 1730, 2169
ArsI	GACNNNNNNTTYG	2 cut(s)	1565, 1597
Asp700I	GAANNNNTTC	1 cut(s)	2388
AspLEI	GCGC	3 cut(s)	207, 1282, 2133
AspS9I	GGNCC	5 cut(s)	345, 529, 1169, 1487, 1793
AsuC2I	CCSGG	2 cut(s)	264, 2304
AsuHPI	GGTGA	4 cut(s)	299, 849, 938, 1770
AsuII	TTCGAA	1 cut(s)	1850
AvaII	GGWCC	4 cut(s)	345, 1169, 1487, 1793
BanII	GRGCYC	2 cut(s)	195, 241
BbrPI	CACGTG	1 cut(s)	2056
BbsI	GAAGAC	3 cut(s)	1578, 1875, 2238
Bbv12I	GWGCWC	2 cut(s)	195, 241
BccI	CCATC	4 cut(s)	413, 1694, 1784, 2348
BcgI	CGANNNNNNTGC	2 cut(s)	2184, 2218
BciT130I	CCWGG	7 cut(s)	534, 820, 950, 1380, 1560, 1658, 1691
BciVI	GTATCC	1 cut(s)	1646
BclI	TGATCA	1 cut(s)	1351
BcnI	CCSGG	2 cut(s)	264, 2304
BcoDI	GTCTC	5 cut(s)	1204, 1780, 2263, 2272, 2442
BfmI	CTRYAG	1 cut(s)	579
BfoI	RGCGCY	1 cut(s)	208
BfuI	GTATCC	1 cut(s)	1646
BglII	AGATCT	1 cut(s)	1918
BlpI	GCTNAGC	1 cut(s)	2571
Bme1390I	CCNGG	9 cut(s)	264, 534, 820, 950, 1380, 1560, 1658, 1691, 2304
Bme18I	GGWCC	4 cut(s)	345, 1169, 1487, 1793
BmeRI	GACNNNNNGTC	1 cut(s)	1832
BmgT120I	GGNCC	5 cut(s)	345, 529, 1169, 1487, 1793
BmiI	GGNNCC	3 cut(s)	531, 1171, 1488
BmrFI	CCNGG	9 cut(s)	264, 534, 820, 950, 1380, 1560, 1658, 1691, 2304
BmrI	ACTGGG	1 cut(s)	1458
BmuI	ACTGGG	1 cut(s)	1458
BoxI	GACNNNNGTC	1 cut(s)	2284
BpiI	GAAGAC	3 cut(s)	1578, 1875, 2238
BpmI	CTGGAG	3 cut(s)	971, 2147, 2294
Bpu10I	CCTNAGC	1 cut(s)	1959
Bpu1102I	GCTNAGC	1 cut(s)	2571
Bpu14I	TTCGAA	1 cut(s)	1850
BpuMI	CCSGG	2 cut(s)	264, 2304
Bsa29I	ATCGAT	1 cut(s)	2589
BsaAI	YACGTR	1 cut(s)	2056
BsaBI	GATNNNNATC	1 cut(s)	642
BsaHI	GRCGYC	1 cut(s)	267
BsaI	GGTCTC	1 cut(s)	1780
BsaJI	CCNNGG	4 cut(s)	532, 1657, 2302, 2406
BsaWI	WCCGGW	1 cut(s)	162
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 239, 269
Bsc4I	CCNNNNNNNGG	3 cut(s)	269, 537, 2488
Bse118I	RCCGGY	1 cut(s)	374
Bse1I	ACTGG	5 cut(s)	1180, 1434, 1453, 1980, 2277
Bse3DI	GCAATG	4 cut(s)	321, 1558, 1781, 1890
Bse8I	GATNNNNATC	1 cut(s)	642
BseAI	TCCGGA	1 cut(s)	162
BseBI	CCWGG	7 cut(s)	534, 820, 950, 1380, 1560, 1658, 1691
BseCI	ATCGAT	1 cut(s)	2589
BseDI	CCNNGG	4 cut(s)	532, 1657, 2302, 2406
BseGI	GGATG	8 cut(s)	14, 307, 658, 1045, 1248, 1270, 1686, 2359
BseJI	GATNNNNATC	1 cut(s)	642
BseLI	CCNNNNNNNGG	3 cut(s)	269, 537, 2488
BseMI	GCAATG	4 cut(s)	321, 1558, 1781, 1890
BseNI	ACTGG	5 cut(s)	1180, 1434, 1453, 1980, 2277
BseRI	GAGGAG	3 cut(s)	28, 355, 2522
BsgI	GTGCAG	2 cut(s)	747, 1782
Bsh1236I	CGCG	2 cut(s)	28, 246
BshFI	GGCC	4 cut(s)	423, 530, 976, 2027
BshVI	ATCGAT	1 cut(s)	2589
BsiHKAI	GWGCWC	2 cut(s)	195, 241
BsiSI	CCGG	5 cut(s)	163, 264, 375, 2006, 2304
BslFI	GGGAC	2 cut(s)	1177, 1781
BslI	CCNNNNNNNGG	3 cut(s)	269, 537, 2488
BsmAI	GTCTC	5 cut(s)	1204, 1780, 2263, 2272, 2442
BsmFI	GGGAC	2 cut(s)	1177, 1781
BsmI	GAATGC	4 cut(s)	961, 1060, 1397, 1587
BsnI	GGCC	4 cut(s)	423, 530, 976, 2027
Bso31I	GGTCTC	1 cut(s)	1780
Bsp119I	TTCGAA	1 cut(s)	1850
Bsp1286I	GDGCHC	2 cut(s)	195, 241
Bsp13I	TCCGGA	1 cut(s)	162
Bsp1720I	GCTNAGC	1 cut(s)	2571
BspACI	CCGC	9 cut(s)	70, 174, 244, 424, 475, 959, 1246, 1727, 2181
BspANI	GGCC	4 cut(s)	423, 530, 976, 2027
BspDI	ATCGAT	1 cut(s)	2589
BspEI	TCCGGA	1 cut(s)	162
BspFNI	CGCG	2 cut(s)	28, 246
BspHI	TCATGA	2 cut(s)	616, 1480
BspLI	GGNNCC	3 cut(s)	531, 1171, 1488
BspMAI	CTGCAG	1 cut(s)	583
BspPI	GGATC	6 cut(s)	154, 951, 1304, 1971, 1986, 1988
BspQI	GCTCTTC	1 cut(s)	1296
BspT104I	TTCGAA	1 cut(s)	1850
BspTNI	GGTCTC	1 cut(s)	1780
BsrDI	GCAATG	4 cut(s)	321, 1558, 1781, 1890
BsrFI	RCCGGY	1 cut(s)	374
BsrI	ACTGG	5 cut(s)	1180, 1434, 1453, 1980, 2277
BssAI	RCCGGY	1 cut(s)	374
BssECI	CCNNGG	4 cut(s)	532, 1657, 2302, 2406
BssNI	GRCGYC	1 cut(s)	267
BssT1I	CCWWGG	1 cut(s)	2406
Bst2UI	CCWGG	7 cut(s)	534, 820, 950, 1380, 1560, 1658, 1691
Bst4CI	ACNGT	5 cut(s)	2077, 2107, 2253, 2388, 2536
Bst6I	CTCTTC	3 cut(s)	46, 257, 1296
BstACI	GRCGYC	1 cut(s)	267
BstBAI	YACGTR	1 cut(s)	2056
BstBI	TTCGAA	1 cut(s)	1850
BstC8I	GCNNGC	3 cut(s)	376, 477, 1801
BstF5I	GGATG	8 cut(s)	14, 307, 658, 1045, 1248, 1270, 1686, 2359
BstFNI	CGCG	2 cut(s)	28, 246
BstH2I	RGCGCY	1 cut(s)	208
BstHHI	GCGC	3 cut(s)	207, 1282, 2133
BstMAI	GTCTC	5 cut(s)	1204, 1780, 2263, 2272, 2442
BstMWI	GCNNNNNNNGC	7 cut(s)	380, 734, 1022, 1277, 2187, 2321, 2546
BstNI	CCWGG	7 cut(s)	534, 820, 950, 1380, 1560, 1658, 1691
BstNSI	RCATGY	1 cut(s)	2285
BstPAI	GACNNNNGTC	1 cut(s)	2284
BstSCI	CCNGG	9 cut(s)	262, 532, 818, 948, 1378, 1558, 1656, 1689, 2302
BstSFI	CTRYAG	1 cut(s)	579
BstUI	CGCG	2 cut(s)	28, 246
BstV2I	GAAGAC	3 cut(s)	1578, 1875, 2238
BstX2I	RGATCY	4 cut(s)	1918, 1963, 1978, 1993
BstYI	RGATCY	4 cut(s)	1918, 1963, 1978, 1993
Bsu15I	ATCGAT	1 cut(s)	2589
BsuI	GTATCC	1 cut(s)	1646
BsuRI	GGCC	4 cut(s)	423, 530, 976, 2027
BsuTUI	ATCGAT	1 cut(s)	2589
BtgZI	GCGATG	1 cut(s)	586
BtsCI	GGATG	8 cut(s)	14, 307, 658, 1045, 1248, 1270, 1686, 2359
BtsI	GCAGTG	3 cut(s)	378, 1080, 2227
BtsIMutI	CAGTG	6 cut(s)	378, 930, 1080, 1173, 1214, 2227
Cac8I	GCNNGC	3 cut(s)	376, 477, 1801
CaiI	CAGNNNCTG	2 cut(s)	1966, 2125
CciI	TCATGA	2 cut(s)	616, 1480
CfoI	GCGC	3 cut(s)	207, 1282, 2133
Cfr10I	RCCGGY	1 cut(s)	374
Cfr13I	GGNCC	5 cut(s)	345, 529, 1169, 1487, 1793
ClaI	ATCGAT	1 cut(s)	2589
CseI	GACGC	5 cut(s)	17, 34, 256, 287, 2331
CsiI	ACCWGGT	1 cut(s)	1378
Csp6I	GTAC	3 cut(s)	494, 704, 2605
CviQI	GTAC	3 cut(s)	494, 704, 2605
DriI	GACNNNNNGTC	1 cut(s)	1832
EaeI	YGGCCR	1 cut(s)	421
Eam1104I	CTCTTC	3 cut(s)	46, 257, 1296
Eam1105I	GACNNNNNGTC	1 cut(s)	1832
EarI	CTCTTC	3 cut(s)	46, 257, 1296
EciI	GGCGGA	1 cut(s)	163
Ecl136II	GAGCTC	2 cut(s)	193, 239
Eco130I	CCWWGG	1 cut(s)	2406
Eco24I	GRGCYC	2 cut(s)	195, 241
Eco31I	GGTCTC	1 cut(s)	1780
Eco47I	GGWCC	4 cut(s)	345, 1169, 1487, 1793
Eco53kI	GAGCTC	2 cut(s)	193, 239
Eco57I	CTGAAG	5 cut(s)	419, 1017, 1185, 2562, 2597
Eco72I	CACGTG	1 cut(s)	2056
EcoICRI	GAGCTC	2 cut(s)	193, 239
EcoO109I	RGGNCCY	3 cut(s)	345, 1169, 1487
EcoRII	CCWGG	7 cut(s)	532, 818, 948, 1378, 1558, 1656, 1689
EcoT14I	CCWWGG	1 cut(s)	2406
EcoT22I	ATGCAT	2 cut(s)	1045, 1399
EcoT38I	GRGCYC	2 cut(s)	195, 241
ErhI	CCWWGG	1 cut(s)	2406
FalI	AAGNNNNNCTT	6 cut(s)	393, 425, 1857, 1889, 2460, 2492
FaqI	GGGAC	2 cut(s)	1177, 1781
FauI	CCCGC	2 cut(s)	468, 952
FauNDI	CATATG	2 cut(s)	979, 1678
FbaI	TGATCA	1 cut(s)	1351
FokI	GGATG	7 cut(s)	314, 665, 1052, 1255, 1277, 1673, 2366
FriOI	GRGCYC	2 cut(s)	195, 241
GlaI	GCGC	3 cut(s)	206, 1281, 2132
GsuI	CTGGAG	3 cut(s)	971, 2147, 2294
HaeII	RGCGCY	1 cut(s)	208
HaeIII	GGCC	4 cut(s)	423, 530, 976, 2027
HapII	CCGG	5 cut(s)	163, 264, 375, 2006, 2304
HgaI	GACGC	5 cut(s)	17, 34, 256, 287, 2331
HhaI	GCGC	3 cut(s)	207, 1282, 2133
Hin1I	GRCGYC	1 cut(s)	267
Hin6I	GCGC	3 cut(s)	205, 1280, 2131
HinP1I	GCGC	3 cut(s)	205, 1280, 2131
HincII	GTYRAC	3 cut(s)	1624, 2073, 2473
HindII	GTYRAC	3 cut(s)	1624, 2073, 2473
HpaII	CCGG	5 cut(s)	163, 264, 375, 2006, 2304
HphI	GGTGA	4 cut(s)	299, 849, 938, 1770
Hpy166II	GTNNAC	7 cut(s)	706, 1069, 1624, 2073, 2249, 2473, 2599
Hpy8I	GTNNAC	7 cut(s)	706, 1069, 1624, 2073, 2249, 2473, 2599
Hpy99I	CGWCG	4 cut(s)	28, 190, 272, 281
HpyAV	CCTTC	8 cut(s)	55, 1160, 1232, 1591, 1846, 1939, 2482, 2509
HpyCH4III	ACNGT	5 cut(s)	2077, 2107, 2253, 2388, 2536
HpyCH4IV	ACGT	1 cut(s)	2055
HpyF10VI	GCNNNNNNNGC	7 cut(s)	380, 734, 1022, 1277, 2187, 2321, 2546
HpySE526I	ACGT	1 cut(s)	2055
Hsp92I	GRCGYC	1 cut(s)	267
HspAI	GCGC	3 cut(s)	205, 1280, 2131
Kpn2I	TCCGGA	1 cut(s)	162
KroI	GCCGGC	1 cut(s)	374
KroNI	GCCGGC	1 cut(s)	376
Ksp22I	TGATCA	1 cut(s)	1351
LguI	GCTCTTC	1 cut(s)	1296
LmnI	GCTCC	9 cut(s)	165, 190, 198, 237, 1463, 2122, 2128, 2357, 2410
MabI	ACCWGGT	1 cut(s)	1378
MaeII	ACGT	1 cut(s)	2055
MaeIII	GTNAC	5 cut(s)	388, 1876, 2051, 2306, 2361
MfeI	CAATTG	1 cut(s)	2553
MflI	RGATCY	4 cut(s)	1918, 1963, 1978, 1993
MhlI	GDGCHC	2 cut(s)	195, 241
MluI	ACGCGT	1 cut(s)	26
MlyI	GAGTC	5 cut(s)	212, 218, 977, 1142, 2269
MmeI	TCCRAC	8 cut(s)	168, 220, 240, 246, 250, 443, 921, 1017
Mph1103I	ATGCAT	2 cut(s)	1045, 1399
MroI	TCCGGA	1 cut(s)	162
MroNI	GCCGGC	1 cut(s)	374
MroXI	GAANNNNTTC	1 cut(s)	2388
MseI	TTAA	5 cut(s)	1259, 1472, 1743, 2334, 2442
MslI	CAYNNNNRTG	6 cut(s)	312, 935, 1178, 1804, 1883, 1931
MspA1I	CMGCKG	3 cut(s)	451, 776, 2575
MspI	CCGG	5 cut(s)	163, 264, 375, 2006, 2304
MspR9I	CCNGG	9 cut(s)	264, 534, 820, 950, 1380, 1560, 1658, 1691, 2304
MunI	CAATTG	1 cut(s)	2553
Mva1269I	GAATGC	4 cut(s)	961, 1060, 1397, 1587
MvaI	CCWGG	7 cut(s)	534, 820, 950, 1380, 1560, 1658, 1691
MvnI	CGCG	2 cut(s)	28, 246
MwoI	GCNNNNNNNGC	7 cut(s)	380, 734, 1022, 1277, 2187, 2321, 2546
NaeI	GCCGGC	1 cut(s)	376
NciI	CCSGG	2 cut(s)	264, 2304
NdeI	CATATG	2 cut(s)	979, 1678
NgoMIV	GCCGGC	1 cut(s)	374
NlaIV	GGNNCC	3 cut(s)	531, 1171, 1488
NmuCI	GTSAC	4 cut(s)	388, 1876, 2051, 2306
NsiI	ATGCAT	2 cut(s)	1045, 1399
NspI	RCATGY	1 cut(s)	2285
NspV	TTCGAA	1 cut(s)	1850
OliI	CACNNNNGTG	3 cut(s)	312, 935, 1931
PagI	TCATGA	2 cut(s)	616, 1480
PciI	ACATGT	1 cut(s)	2281
PciSI	GCTCTTC	1 cut(s)	1296
PctI	GAATGC	4 cut(s)	961, 1060, 1397, 1587
PdiI	GCCGGC	1 cut(s)	376
PdmI	GAANNNNTTC	1 cut(s)	2388
PfeI	GAWTC	5 cut(s)	273, 466, 613, 668, 1600
PflFI	GACNNNGTC	3 cut(s)	1772, 1874, 2477
PleI	GAGTC	5 cut(s)	212, 218, 977, 1142, 2268
PmaCI	CACGTG	1 cut(s)	2056
PmlI	CACGTG	1 cut(s)	2056
PpsI	GAGTC	5 cut(s)	212, 218, 977, 1142, 2268
Ppu21I	YACGTR	1 cut(s)	2056
PpuMI	RGGWCCY	3 cut(s)	345, 1169, 1487
PscI	ACATGT	1 cut(s)	2281
PshAI	GACNNNNGTC	1 cut(s)	2284
Psp124BI	GAGCTC	2 cut(s)	195, 241
Psp5II	RGGWCCY	3 cut(s)	345, 1169, 1487
Psp6I	CCWGG	7 cut(s)	532, 818, 948, 1378, 1558, 1656, 1689
PspCI	CACGTG	1 cut(s)	2056
PspGI	CCWGG	7 cut(s)	532, 818, 948, 1378, 1558, 1656, 1689
PspN4I	GGNNCC	3 cut(s)	531, 1171, 1488
PspPI	GGNCC	5 cut(s)	345, 529, 1169, 1487, 1793
PspPPI	RGGWCCY	3 cut(s)	345, 1169, 1487
PstI	CTGCAG	1 cut(s)	583
PstNI	CAGNNNCTG	2 cut(s)	1966, 2125
PsuI	RGATCY	4 cut(s)	1918, 1963, 1978, 1993
PsyI	GACNNNGTC	3 cut(s)	1772, 1874, 2477
PvuII	CAGCTG	3 cut(s)	451, 776, 2575
RsaI	GTAC	3 cut(s)	495, 705, 2606
RsaNI	GTAC	3 cut(s)	494, 704, 2605
RseI	CAYNNNNRTG	6 cut(s)	312, 935, 1178, 1804, 1883, 1931
SacI	GAGCTC	2 cut(s)	195, 241
SapI	GCTCTTC	1 cut(s)	1296
SaqAI	TTAA	5 cut(s)	1259, 1472, 1743, 2334, 2442
Sau96I	GGNCC	5 cut(s)	345, 529, 1169, 1487, 1793
SchI	GAGTC	5 cut(s)	212, 218, 977, 1142, 2269
ScrFI	CCNGG	9 cut(s)	264, 534, 820, 950, 1380, 1560, 1658, 1691, 2304
SduI	GDGCHC	2 cut(s)	195, 241
SexAI	ACCWGGT	1 cut(s)	1378
SfcI	CTRYAG	1 cut(s)	579
SfuI	TTCGAA	1 cut(s)	1850
SinI	GGWCC	4 cut(s)	345, 1169, 1487, 1793
SmiMI	CAYNNNNRTG	6 cut(s)	312, 935, 1178, 1804, 1883, 1931
SsiI	CCGC	9 cut(s)	70, 174, 244, 424, 475, 959, 1246, 1727, 2181
SspI	AATATT	1 cut(s)	1097
SstI	GAGCTC	2 cut(s)	195, 241
StyD4I	CCNGG	9 cut(s)	262, 532, 818, 948, 1378, 1558, 1656, 1689, 2302
StyI	CCWWGG	1 cut(s)	2406
TaaI	ACNGT	5 cut(s)	2077, 2107, 2253, 2388, 2536
TaiI	ACGT	1 cut(s)	2058
TaqI	TCGA	9 cut(s)	276, 458, 891, 1299, 1507, 1850, 1937, 2496, 2589
TatI	WGTACW	2 cut(s)	703, 2604
TauI	GCSGC	1 cut(s)	426
TfiI	GAWTC	5 cut(s)	273, 466, 613, 668, 1600
Tru1I	TTAA	5 cut(s)	1259, 1472, 1743, 2334, 2442
Tru9I	TTAA	5 cut(s)	1259, 1472, 1743, 2334, 2442
TscAI	CASTG	6 cut(s)	385, 937, 1087, 1180, 1221, 2227
TseFI	GTSAC	4 cut(s)	388, 1876, 2051, 2306
Tsp45I	GTSAC	4 cut(s)	388, 1876, 2051, 2306
TspDTI	ATGAA	9 cut(s)	64, 310, 669, 771, 1469, 1569, 1584, 1958, 2528
TspRI	CASTG	6 cut(s)	385, 937, 1087, 1180, 1221, 2227
Tth111I	GACNNNGTC	3 cut(s)	1772, 1874, 2477
VpaK11BI	GGWCC	4 cut(s)	345, 1169, 1487, 1793
XapI	RAATTY	3 cut(s)	829, 1730, 2169
XceI	RCATGY	1 cut(s)	2285
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2413
XmnI	GAANNNNTTC	1 cut(s)	2388
Zsp2I	ATGCAT	2 cut(s)	1045, 1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.