Rh3DG065100

Belongs to the peptidase M24B family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
4310422 .. 4315591
5170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG065100.1

Sequence Viewer

Length: 1467 bp
ATGATGTTTTGGCCCCTGGTGGGAGAGTTGGCATTGACCCTGGATCAGTTTCTGTTTTCTTCCGATGCTGCAGAAGAATTGAAGCAGGGCATCGCTAACAAGAATCATGAGTTGGTTTTTCTGTATGATAAAAATCTTGTGGATGAAATATGGAAAGAATCAAGACCAGAGCCTCCAAAAAAACCAATTAGAGTACACGAACTGAAATATGCTGGTGCAGATGTGGCATCAAAGTTATCATCTTTGAGGTCTGAACTTGTTGCAGCTGGTTCATCTGCAATAGTTATATCCATGCTTGATGAAGTTGCCTGGCTGTTGAATTTGAGAGGAAGTGATGTTCCACATTCACCTGTTATGTATGCTTATCTGATTGTGGAGATCGACAAAGCAAAGTTATTTGTAGATACTTCCAAAGTAGGCACTGAGGTGTTGGATCACCTGGAGAATGCGGGTATTGAATTGAGGCCATATGACACCATTCTTTCTGAAGTAGAAAGTCTGGCAGCAAAAGGAGCTAAAGTTTGGTTGGATGCATCATCTGTGAATGCAGCTATTGTCCACACCTACAACACTGCTTGTGAGAAATATTACGAGAGCCTTGAAAGTAAAAGAAAAAGTAAGACTAAGGAATATGATGACTCAAATGGTTGGTCTGAAGGACCCACTGGAATGTATAGGGTGTCCCCTGTCTCTTTGGCAAAGGCACTGAAAAATGATGCTGAGTTAGAAGGGATGCGGAGTTGTCATTTAAGGGATGCTGCTGCTTTAGCGCAGTTTTGGGTTTGGATCGAAGAGCAAATCAACAAGAATGTGAAACTAACTGAGGTAGAAGCTGCAGAAAAACTTCTTGAATTTCGTTCAAGGCAGCCTGGTTTCCTAGATACAAGCTTTGACACCATCAGTGGCTCTGGTGCAAATGGTGCTATCATACATTATAAACCAGAACCAGATAGTTGCAGTGTTGTGAATGAAAGGAAACTCTTTCTGTTGGATAGTGGAGCTCAGTATGTGGACGGAACAACTGACATAACAAGGACCGTACATTTTGGTGAACCTTCTCCACGTCAAAAAGACTGCTTCACCCGAGTTTTACAGGGTCATATAGCTCTTGATCAGGCCGTATTCCCTGAAAACACACCGGGTTTTGTCTTAGATGCATTCGCTCGTTCTTTTCTTTGGAAGATTGGACTGGATTACCGACATGGAACTGGGCACGGTGTGGGAGCTGCATTAAATGTTCATGAGGGTCCTCAAAGTATTAGCTTTCGATTTGGAAATACAACTTCCTTACAGAGTGGTATGATTGTTAGCAATGAACCTGGCTATTATGAAGACCATGCCTTCGGCATTCGGATTGAGAATCTCCTTGTTGTGAAAGAAGTTGACACGCCAAATCGTTTTGGAGGAATTGGATACCTGGGATTTGAAAAACTCACATATGTTCCCATCCAGGTATGCAGAAGCTAA

Protein Analysis

488

Amino Acids

54.16

Weight (kDa)

5.3

Isoelectric Point (pI)

40.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Creatinase_N_2 PF16189 55 - 241 2.2e-46 Creatinase/Prolidase N-terminal domain
Peptidase_M24 PF00557 243 - 460 9.5e-52 Metallopeptidase family M24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 936
AciI CCGC 2 cut(s) 449, 736
AclWI GGATC 3 cut(s) 51, 441, 794
AcsI RAATTY 2 cut(s) 319, 851
AcuI CTGAAG 2 cut(s) 507, 675
AdeI CACNNNGTG 1 cut(s) 1219
AfaI GTAC 2 cut(s) 195, 1041
AfiI CCNNNNNNNGG 1 cut(s) 20
AgsI TTSAA 7 cut(s) 82, 319, 458, 602, 851, 861, 1427
AjiI CACGTC 1 cut(s) 1064
AjnI CCWGG 8 cut(s) 15, 39, 308, 438, 868, 1318, 1416, 1449
AjuI GAANNNNNNNTTGG 2 cut(s) 95, 127
AleI CACNNNNGTG 1 cut(s) 425
AloI GAACNNNNNNTCC 2 cut(s) 321, 353
Alw21I GWGCWC 1 cut(s) 1003
Alw26I GTCTC 1 cut(s) 694
AlwI GGATC 3 cut(s) 51, 441, 794
AlwNI CAGNNNCTG 1 cut(s) 52
Ama87I CYCGRG 1 cut(s) 1083
AoxI GGCC 3 cut(s) 11, 464, 1116
ApeKI GCWGC 9 cut(s) 68, 263, 503, 548, 758, 761, 833, 865, 1226
ApoI RAATTY 2 cut(s) 319, 851
ArsI GACNNNNNNTTYG 4 cut(s) 635, 667, 1325, 1357
Asp700I GAANNNNTTC 1 cut(s) 843
AspLEI GCGC 1 cut(s) 772
AspS9I GGNCC 4 cut(s) 12, 659, 1035, 1247
AsuC2I CCSGG 1 cut(s) 1140
AsuHPI GGTGA 4 cut(s) 339, 428, 1061, 1072
AvaI CYCGRG 1 cut(s) 1083
AvaII GGWCC 3 cut(s) 659, 1035, 1247
BaeGI GKGCMC 1 cut(s) 1215
BanII GRGCYC 1 cut(s) 1003
BbsI GAAGAC 1 cut(s) 1338
Bbv12I GWGCWC 1 cut(s) 1003
BbvI GCAGC 9 cut(s) 55, 275, 515, 560, 745, 748, 820, 877, 1213
BccI CCATC 2 cut(s) 905, 1454
BceAI ACGGC 1 cut(s) 1103
BciT130I CCWGG 8 cut(s) 17, 41, 310, 440, 870, 1320, 1418, 1451
BciVI GTATCC 1 cut(s) 1406
BclI TGATCA 1 cut(s) 1111
BcnI CCSGG 1 cut(s) 1140
BcoDI GTCTC 1 cut(s) 694
BfaI CTAG 1 cut(s) 878
BfmI CTRYAG 2 cut(s) 69, 834
BfuI GTATCC 1 cut(s) 1406
BisI GCNGC 9 cut(s) 69, 264, 504, 549, 759, 762, 834, 866, 1227
BlsI GCNGC 9 cut(s) 70, 265, 505, 550, 760, 763, 835, 867, 1228
Bme1390I CCNGG 9 cut(s) 17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
Bme18I GGWCC 3 cut(s) 659, 1035, 1247
BmeT110I CYCGRG 1 cut(s) 1083
BmgBI CACGTC 1 cut(s) 1064
BmgT120I GGNCC 4 cut(s) 12, 659, 1035, 1247
BmiI GGNNCC 3 cut(s) 14, 661, 1248
BmrFI CCNGG 9 cut(s) 17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
BmrI ACTGGG 1 cut(s) 1218
BmsI GCATC 9 cut(s) 55, 99, 236, 520, 542, 706, 723, 745, 1144
BmuI ACTGGG 1 cut(s) 1218
BpiI GAAGAC 1 cut(s) 1338
BpmI CTGGAG 1 cut(s) 461
BpuMI CCSGG 1 cut(s) 1140
BsaBI GATNNNNATC 1 cut(s) 132
BsaJI CCNNGG 3 cut(s) 15, 39, 1417
BsaXI ACNNNNNCTCC 2 cut(s) 504, 534
Bsc4I CCNNNNNNNGG 1 cut(s) 20
Bse1I ACTGG 3 cut(s) 670, 1194, 1213
Bse3DI GCAATG 1 cut(s) 1318
Bse8I GATNNNNATC 1 cut(s) 132
BseBI CCWGG 8 cut(s) 17, 41, 310, 440, 870, 1320, 1418, 1451
BseDI CCNNGG 3 cut(s) 15, 39, 1417
BseGI GGATG 5 cut(s) 148, 535, 738, 760, 1446
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 1 cut(s) 20
BseMI GCAATG 1 cut(s) 1318
BseMII CTCAG 4 cut(s) 414, 711, 813, 1016
BseNI ACTGG 3 cut(s) 670, 1194, 1213
BseSI GKGCMC 1 cut(s) 1215
BseXI GCAGC 9 cut(s) 55, 275, 515, 560, 745, 748, 820, 877, 1213
BsgI GTGCAG 1 cut(s) 237
BshFI GGCC 3 cut(s) 13, 466, 1118
BsiHKAI GWGCWC 1 cut(s) 1003
BsiHKCI CYCGRG 1 cut(s) 1083
BsiSI CCGG 1 cut(s) 1139
BslFI GGGAC 1 cut(s) 667
BslI CCNNNNNNNGG 1 cut(s) 20
BsmAI GTCTC 1 cut(s) 694
BsmFI GGGAC 1 cut(s) 667
BsmI GAATGC 4 cut(s) 451, 550, 1157, 1347
BsnI GGCC 3 cut(s) 13, 466, 1118
BsoBI CYCGRG 1 cut(s) 1083
Bsp1286I GDGCHC 2 cut(s) 1003, 1215
Bsp143I GATC 5 cut(s) 43, 378, 433, 786, 1111
BspACI CCGC 2 cut(s) 449, 736
BspANI GGCC 3 cut(s) 13, 466, 1118
BspCNI CTCAG 4 cut(s) 415, 712, 814, 1015
BspHI TCATGA 2 cut(s) 106, 1240
BspLI GGNNCC 3 cut(s) 14, 661, 1248
BspMAI CTGCAG 2 cut(s) 73, 838
BspPI GGATC 3 cut(s) 51, 441, 794
BspQI GCTCTTC 1 cut(s) 786
BsrDI GCAATG 1 cut(s) 1318
BsrI ACTGG 3 cut(s) 670, 1194, 1213
BssECI CCNNGG 3 cut(s) 15, 39, 1417
BssMI GATC 5 cut(s) 43, 378, 433, 786, 1111
Bst2UI CCWGG 8 cut(s) 17, 41, 310, 440, 870, 1320, 1418, 1451
Bst4CI ACNGT 2 cut(s) 1039, 1217
Bst6I CTCTTC 1 cut(s) 786
BstAPI GCANNNNNTGC 1 cut(s) 920
BstDEI CTNAG 6 cut(s) 423, 624, 720, 822, 1002, 1150
BstF5I GGATG 5 cut(s) 148, 535, 738, 760, 1446
BstHHI GCGC 1 cut(s) 772
BstKTI GATC 5 cut(s) 46, 381, 436, 789, 1114
BstMAI GTCTC 1 cut(s) 694
BstMBI GATC 5 cut(s) 43, 378, 433, 786, 1111
BstMWI GCNNNNNNNGC 4 cut(s) 224, 512, 767, 920
BstNI CCWGG 8 cut(s) 17, 41, 310, 440, 870, 1320, 1418, 1451
BstSCI CCNGG 9 cut(s) 15, 39, 308, 438, 868, 1138, 1318, 1416, 1449
BstSFI CTRYAG 2 cut(s) 69, 834
BstSLI GKGCMC 1 cut(s) 1215
BstV1I GCAGC 9 cut(s) 55, 275, 515, 560, 745, 748, 820, 877, 1213
BstV2I GAAGAC 1 cut(s) 1338
BsuI GTATCC 1 cut(s) 1406
BsuRI GGCC 3 cut(s) 13, 466, 1118
BtgZI GCGATG 1 cut(s) 76
BtrI CACGTC 1 cut(s) 1064
BtsCI GGATG 5 cut(s) 148, 535, 738, 760, 1446
BtsI GCAGTG 2 cut(s) 570, 964
BtsIMutI CAGTG 6 cut(s) 420, 570, 663, 704, 907, 964
CaiI CAGNNNCTG 1 cut(s) 52
CciI TCATGA 2 cut(s) 106, 1240
CfoI GCGC 1 cut(s) 772
Cfr13I GGNCC 4 cut(s) 12, 659, 1035, 1247
Csp6I GTAC 2 cut(s) 194, 1040
CviAII CATG 5 cut(s) 107, 292, 1202, 1241, 1337
CviQI GTAC 2 cut(s) 194, 1040
DdeI CTNAG 6 cut(s) 423, 624, 720, 822, 1002, 1150
DpnI GATC 5 cut(s) 45, 380, 435, 788, 1113
DpnII GATC 5 cut(s) 43, 378, 433, 786, 1111
DraIII CACNNNGTG 1 cut(s) 1219
Eam1104I CTCTTC 1 cut(s) 786
EarI CTCTTC 1 cut(s) 786
Ecl136II GAGCTC 1 cut(s) 1001
Eco24I GRGCYC 1 cut(s) 1003
Eco47I GGWCC 3 cut(s) 659, 1035, 1247
Eco53kI GAGCTC 1 cut(s) 1001
Eco57I CTGAAG 2 cut(s) 507, 675
Eco88I CYCGRG 1 cut(s) 1083
EcoICRI GAGCTC 1 cut(s) 1001
EcoO109I RGGNCCY 2 cut(s) 659, 1247
EcoRII CCWGG 8 cut(s) 15, 39, 308, 438, 868, 1318, 1416, 1449
EcoT22I ATGCAT 2 cut(s) 535, 1159
EcoT38I GRGCYC 1 cut(s) 1003
FaeI CATG 5 cut(s) 110, 295, 1205, 1244, 1340
FaqI GGGAC 1 cut(s) 667
FatI CATG 5 cut(s) 106, 291, 1201, 1240, 1336
FauI CCCGC 1 cut(s) 442
FauNDI CATATG 2 cut(s) 469, 1438
FbaI TGATCA 1 cut(s) 1111
Fnu4HI GCNGC 9 cut(s) 69, 264, 504, 549, 759, 762, 834, 866, 1227
FokI GGATG 5 cut(s) 155, 542, 745, 767, 1433
FriOI GRGCYC 1 cut(s) 1003
Fsp4HI GCNGC 9 cut(s) 69, 264, 504, 549, 759, 762, 834, 866, 1227
FspBI CTAG 1 cut(s) 878
GlaI GCGC 1 cut(s) 771
GluI GCNGC 9 cut(s) 69, 264, 504, 549, 759, 762, 834, 866, 1227
GsuI CTGGAG 1 cut(s) 461
HaeIII GGCC 3 cut(s) 13, 466, 1118
HapII CCGG 1 cut(s) 1139
HhaI GCGC 1 cut(s) 772
Hin1II CATG 5 cut(s) 110, 295, 1205, 1244, 1340
Hin6I GCGC 1 cut(s) 770
HinP1I GCGC 1 cut(s) 770
HincII GTYRAC 1 cut(s) 1384
HindII GTYRAC 1 cut(s) 1384
HindIII AAGCTT 1 cut(s) 886
HinfI GANTC 4 cut(s) 103, 158, 638, 1360
HpaII CCGG 1 cut(s) 1139
HphI GGTGA 4 cut(s) 339, 428, 1061, 1072
Hpy166II GTNNAC 5 cut(s) 196, 559, 1012, 1052, 1384
Hpy188I TCNGA 6 cut(s) 64, 253, 369, 487, 655, 1353
Hpy188III TCNNGA 5 cut(s) 107, 162, 848, 1109, 1241
Hpy8I GTNNAC 5 cut(s) 196, 559, 1012, 1052, 1384
HpyAV CCTTC 4 cut(s) 650, 722, 1065, 1351
HpyCH4III ACNGT 2 cut(s) 1039, 1217
HpyCH4IV ACGT 1 cut(s) 1063
HpyF10VI GCNNNNNNNGC 4 cut(s) 224, 512, 767, 920
HpyF3I CTNAG 6 cut(s) 423, 624, 720, 822, 1002, 1150
HpySE526I ACGT 1 cut(s) 1063
Hsp92II CATG 5 cut(s) 110, 295, 1205, 1244, 1340
HspAI GCGC 1 cut(s) 770
Ksp22I TGATCA 1 cut(s) 1111
Kzo9I GATC 5 cut(s) 43, 378, 433, 786, 1111
LguI GCTCTTC 1 cut(s) 786
LmnI GCTCC 3 cut(s) 512, 998, 1223
Lsp1109I GCAGC 9 cut(s) 55, 275, 515, 560, 745, 748, 820, 877, 1213
LweI GCATC 9 cut(s) 55, 99, 236, 520, 542, 706, 723, 745, 1144
MaeI CTAG 1 cut(s) 878
MaeII ACGT 1 cut(s) 1063
MalI GATC 5 cut(s) 45, 380, 435, 788, 1113
MboI GATC 5 cut(s) 43, 378, 433, 786, 1111
MboII GAAGA 5 cut(s) 51, 86, 803, 1192, 1343
MhlI GDGCHC 2 cut(s) 1003, 1215
MluCI AATT 6 cut(s) 77, 186, 319, 458, 851, 1407
MlyI GAGTC 1 cut(s) 632
MmeI TCCRAC 3 cut(s) 411, 507, 969
MnlI CCTC 9 cut(s) 183, 240, 320, 418, 456, 817, 1237, 1260, 1397
Mph1103I ATGCAT 2 cut(s) 535, 1159
MroXI GAANNNNTTC 1 cut(s) 843
MseI TTAA 2 cut(s) 749, 1232
MslI CAYNNNNRTG 3 cut(s) 425, 668, 1047
MspA1I CMGCKG 1 cut(s) 266
MspI CCGG 1 cut(s) 1139
MspR9I CCNGG 9 cut(s) 17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
Mva1269I GAATGC 4 cut(s) 451, 550, 1157, 1347
MvaI CCWGG 8 cut(s) 17, 41, 310, 440, 870, 1320, 1418, 1451
MwoI GCNNNNNNNGC 4 cut(s) 224, 512, 767, 920
NciI CCSGG 1 cut(s) 1140
NdeI CATATG 2 cut(s) 469, 1438
NdeII GATC 5 cut(s) 43, 378, 433, 786, 1111
NlaIII CATG 5 cut(s) 110, 295, 1205, 1244, 1340
NlaIV GGNNCC 3 cut(s) 14, 661, 1248
NsiI ATGCAT 2 cut(s) 535, 1159
OliI CACNNNNGTG 1 cut(s) 425
PagI TCATGA 2 cut(s) 106, 1240
PciSI GCTCTTC 1 cut(s) 786
PctI GAATGC 4 cut(s) 451, 550, 1157, 1347
PdmI GAANNNNTTC 1 cut(s) 843
PfeI GAWTC 3 cut(s) 103, 158, 1360
PkrI GCNGC 9 cut(s) 70, 265, 505, 550, 760, 763, 835, 867, 1228
PleI GAGTC 1 cut(s) 632
PpsI GAGTC 1 cut(s) 632
PpuMI RGGWCCY 2 cut(s) 659, 1247
PsiI TTATAA 1 cut(s) 936
Psp124BI GAGCTC 1 cut(s) 1003
Psp5II RGGWCCY 2 cut(s) 659, 1247
Psp6I CCWGG 8 cut(s) 15, 39, 308, 438, 868, 1318, 1416, 1449
PspGI CCWGG 8 cut(s) 15, 39, 308, 438, 868, 1318, 1416, 1449
PspN4I GGNNCC 3 cut(s) 14, 661, 1248
PspPI GGNCC 4 cut(s) 12, 659, 1035, 1247
PspPPI RGGWCCY 2 cut(s) 659, 1247
PstI CTGCAG 2 cut(s) 73, 838
PstNI CAGNNNCTG 1 cut(s) 52
PvuII CAGCTG 1 cut(s) 266
RsaI GTAC 2 cut(s) 195, 1041
RsaNI GTAC 2 cut(s) 194, 1040
RseI CAYNNNNRTG 3 cut(s) 425, 668, 1047
SacI GAGCTC 1 cut(s) 1003
SapI GCTCTTC 1 cut(s) 786
SaqAI TTAA 2 cut(s) 749, 1232
SatI GCNGC 9 cut(s) 69, 264, 504, 549, 759, 762, 834, 866, 1227
Sau3AI GATC 5 cut(s) 43, 378, 433, 786, 1111
Sau96I GGNCC 4 cut(s) 12, 659, 1035, 1247
SchI GAGTC 1 cut(s) 632
ScrFI CCNGG 9 cut(s) 17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
SduI GDGCHC 2 cut(s) 1003, 1215
SfaNI GCATC 9 cut(s) 55, 99, 236, 520, 542, 706, 723, 745, 1144
SfcI CTRYAG 2 cut(s) 69, 834
SinI GGWCC 3 cut(s) 659, 1035, 1247
SmiMI CAYNNNNRTG 3 cut(s) 425, 668, 1047
Sse9I AATT 6 cut(s) 77, 186, 319, 458, 851, 1407
SsiI CCGC 2 cut(s) 449, 736
SspI AATATT 1 cut(s) 587
SspMI CTAG 1 cut(s) 878
SstI GAGCTC 1 cut(s) 1003
StyD4I CCNGG 9 cut(s) 15, 39, 308, 438, 868, 1138, 1318, 1416, 1449
TaaI ACNGT 2 cut(s) 1039, 1217
TaiI ACGT 1 cut(s) 1066
TaqI TCGA 3 cut(s) 381, 789, 1267
TasI AATT 6 cut(s) 77, 186, 319, 458, 851, 1407
TatI WGTACW 1 cut(s) 193
TfiI GAWTC 3 cut(s) 103, 158, 1360
Tru1I TTAA 2 cut(s) 749, 1232
Tru9I TTAA 2 cut(s) 749, 1232
TscAI CASTG 6 cut(s) 427, 577, 670, 711, 907, 964
TseI GCWGC 9 cut(s) 68, 263, 503, 548, 758, 761, 833, 865, 1226
TspDTI ATGAA 7 cut(s) 159, 261, 315, 984, 1229, 1329, 1344
TspGWI ACGGA 1 cut(s) 1029
TspRI CASTG 6 cut(s) 427, 577, 670, 711, 907, 964
VpaK11BI GGWCC 3 cut(s) 659, 1035, 1247
XapI RAATTY 2 cut(s) 319, 851
XmnI GAANNNNTTC 1 cut(s) 843
XspI CTAG 1 cut(s) 878
Zsp2I ATGCAT 2 cut(s) 535, 1159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.