Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0011079

Physical Location & Seq

Genomic Coordinates Reverse (-)

4163481 .. 4168684

Gene Structure 5204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G004950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGATGTTTTGGCCCCTGGTGGGAGAGTTGGCATTGACCCTGGATCAGTTTCTGTTTTCTTCCGATGCTGCAGAAGAATTGAAGCAGGGCATCGCTAACAAGAATCATGAGTTGGTTTTTCTGTATGATAAAAATCTTGTGGATGAAATATGGAAAGAATCAAGACCAGAGCCTCCAAAAAAACCAATTAGAGTACACGAACTGAAATATGCTGGTGCAGATGTGGCATCAAAGTTATCATCTCTGAGGTCTGAACTTGTTGCAGCTGGTTCATCTGCGATAGTTATATCCATGCTTGATGAAGTTGCCTGGCTGTTGAATTTGAGAGGAAGTGATGTTCCACATTCACCTGTTATGTATGCTTATCTGATTGTGGAGATCGACAAAGCAAAGTTATTTGTAGATACTTCCAAAGTAGGCACTGAGGTGTTGGATCACCTGGAGAATGCGGGTATTGAATTGAGGCCATATGACTCCATTCTTTCTGAAGTAGAAAGTCTGGCAGCAAAAGGGGCTAAAGTTTGGTTGGATGCATCATCTGTGAATGCAGCTATTGTCCACACCTACAACACTGCTTGTGAGAAATATTACGAGAGCCTTGAAAGTAAAAGAAAAAGTAAGACTAAGGAATATGATGACTCAAATGGTTGGTCTGAAGGACCCACTGGAATGTATAGGGTGTCCCCTGTCTCTTTGGCAAAGGCACTGAAAAATGATGCTGAGTTAGAAGGGATGCGGAGTTGTCATTTAAGGGATGCTGCTGCTTTAGCGCAGTTTTGGGTTTGGATCGAAGAGCAAATCAACAAGAATGTGAAACTAACTGAGGTAGAAGCTGCAGAAAAACTTCTTGAATTTCGTTCAAGGCAGCCTGGTTTCCTAGATACCAGCTTTGACACCATCAGTGGCTCTGGTGCAAATGGTGCTATCATACATTATAAACCAGAACCAGATAGTTGCAGTGTTGTGAATGAAAGGAAACTCTTTCTGTTGGATAGTGGAGCTCAGTATGTGGACGGAACAACTGACATAACAAGGACCGTACATTTTGGTGAACCTTCTCCACGTCAAAAAGACTGCTTTACCCGAGTTTTACAGGGTCATATAGCTCTTGATCAGGCAGTATTCCCTGAAAACACACCAGGTTTTGTCTTAGATGCATTCGCTCGTTCTTTTCTTTGGAAGATTGGACTGGATTACCGACATGGAACTGGGCATGGTGTGGGAGCTGCATTAAATGTTCATGAGGGTCCTCAAAGTATTAGCTTTCGATTTGGAAATACAACTTCCTTACAGAGTGGTATGATTGTTAGCAATGAACCTGGCTATTATGAAGACCATGCCTTCGGCATTCGGATTGAGAATCTCCTTGTTGTGAAAGAAGTTGACACGCCAAATCGTTTTGGAGGAATTGGCTACCTGGGATTTGAAAAACTCACATATGTTCCCATCCAGGCTAAATTGATAGACTTGTCTTTGCTTTCTGGTGCGGAATTTGATTGGCTTAATGATTATCATTCACAAGTTTGGGACAAGGTCTCACCATTGCTTGATGGTCCTGCACGCCAATGGCTTTGGAACAACACAAGACCACTTGTCAAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Creatinase_N Creatinase_N_2 Peptidase_M24 Peptidase_M24_C

Protein Analysis

534

Amino Acids

59.52

Weight (kDa)

5.26

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Creatinase_N_2	PF16189	55 - 241	1.8e-46	Creatinase/Prolidase N-terminal domain
Peptidase_M24	PF00557	243 - 460	1.2e-51	Metallopeptidase family M24
Peptidase_M24_C	PF16188	471 - 531	4.2e-25	C-terminal region of peptidase_M24

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05350
fragaria_vesca	FvH4_6g06000 FvH4_6g06000
malus_domestica	MD04G1205000.v1.1
prunus_persica	Prupe.6G325100_v2.0.a1 Prupe.6G325100_v2.0.a1 Prupe.6G325100_v2.0.a1
pyrus_communis	pycom04g18120
rosa_chinensis	RchiOBHm_Chr3g0454961
rosa_laevigata	RLG00000025398
rosa_multiflora	Rmu_sc0001792.1_g000001 Rmu_sc0002169.1_g000008
rosa_roxburghii	Rroxscaffold_6G00424650
rosa_rugosa	Rorug03G0003200 Rorug03G0003300
rosa_samantha	Rh3AG063100 Rh3BG065000 Rh3CG063900 Rh3DG065100
rosa_wichuraiana	Rw3G004950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	936
AciI	CCGC	3 cut(s)	449, 736, 1487
AclWI	GGATC	3 cut(s)	51, 441, 794
AcsI	RAATTY	3 cut(s)	319, 851, 1490
AcuI	CTGAAG	2 cut(s)	507, 675
AfaI	GTAC	2 cut(s)	195, 1041
AfiI	CCNNNNNNNGG	1 cut(s)	20
AgsI	TTSAA	7 cut(s)	82, 319, 458, 602, 851, 861, 1427
AhdI	GACNNNNNGTC	1 cut(s)	1592
AjiI	CACGTC	1 cut(s)	1064
AjnI	CCWGG	9 cut(s)	15, 39, 308, 438, 868, 1138, 1318, 1416, 1449
AjuI	GAANNNNNNNTTGG	2 cut(s)	95, 127
AleI	CACNNNNGTG	1 cut(s)	425
AloI	GAACNNNNNNTCC	2 cut(s)	321, 353
AluBI	AGCT	8 cut(s)	266, 551, 833, 888, 1001, 1106, 1226, 1263
AluI	AGCT	8 cut(s)	266, 551, 833, 888, 1001, 1106, 1226, 1263
Alw21I	GWGCWC	1 cut(s)	1003
Alw26I	GTCTC	2 cut(s)	694, 1540
AlwI	GGATC	3 cut(s)	51, 441, 794
AlwNI	CAGNNNCTG	1 cut(s)	52
Ama87I	CYCGRG	1 cut(s)	1083
AoxI	GGCC	2 cut(s)	11, 464
ApeKI	GCWGC	9 cut(s)	68, 263, 503, 548, 758, 761, 833, 865, 1226
ApoI	RAATTY	3 cut(s)	319, 851, 1490
ArsI	GACNNNNNNTTYG	4 cut(s)	635, 667, 1325, 1357
Asp700I	GAANNNNTTC	1 cut(s)	843
AspLEI	GCGC	1 cut(s)	772
AspS9I	GGNCC	5 cut(s)	12, 659, 1035, 1247, 1553
AsuHPI	GGTGA	4 cut(s)	339, 428, 1061, 1530
AvaI	CYCGRG	1 cut(s)	1083
AvaII	GGWCC	4 cut(s)	659, 1035, 1247, 1553
BanII	GRGCYC	1 cut(s)	1003
BbsI	GAAGAC	1 cut(s)	1338
Bbv12I	GWGCWC	1 cut(s)	1003
BbvI	GCAGC	9 cut(s)	55, 275, 515, 560, 745, 748, 820, 877, 1213
BccI	CCATC	3 cut(s)	905, 1454, 1544
BciT130I	CCWGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
BclI	TGATCA	1 cut(s)	1111
BcoDI	GTCTC	2 cut(s)	694, 1540
BfaI	CTAG	1 cut(s)	878
BfmI	CTRYAG	2 cut(s)	69, 834
BisI	GCNGC	9 cut(s)	69, 264, 504, 549, 759, 762, 834, 866, 1227
BlsI	GCNGC	9 cut(s)	70, 265, 505, 550, 760, 763, 835, 867, 1228
Bme1390I	CCNGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
Bme18I	GGWCC	4 cut(s)	659, 1035, 1247, 1553
BmeRI	GACNNNNNGTC	1 cut(s)	1592
BmeT110I	CYCGRG	1 cut(s)	1083
BmgBI	CACGTC	1 cut(s)	1064
BmgT120I	GGNCC	5 cut(s)	12, 659, 1035, 1247, 1553
BmiI	GGNNCC	3 cut(s)	14, 661, 1248
BmrFI	CCNGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
BmrI	ACTGGG	1 cut(s)	1218
BmsI	GCATC	9 cut(s)	55, 99, 236, 520, 542, 706, 723, 745, 1144
BmuI	ACTGGG	1 cut(s)	1218
BpiI	GAAGAC	1 cut(s)	1338
BpmI	CTGGAG	1 cut(s)	461
BsaBI	GATNNNNATC	1 cut(s)	132
BsaI	GGTCTC	1 cut(s)	1540
BsaJI	CCNNGG	3 cut(s)	15, 39, 1417
Bsc4I	CCNNNNNNNGG	1 cut(s)	20
Bse1I	ACTGG	3 cut(s)	670, 1194, 1213
Bse3DI	GCAATG	2 cut(s)	1318, 1541
Bse8I	GATNNNNATC	1 cut(s)	132
BseBI	CCWGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
BseDI	CCNNGG	3 cut(s)	15, 39, 1417
BseGI	GGATG	5 cut(s)	148, 535, 738, 760, 1446
BseJI	GATNNNNATC	1 cut(s)	132
BseLI	CCNNNNNNNGG	1 cut(s)	20
BseMI	GCAATG	2 cut(s)	1318, 1541
BseMII	CTCAG	5 cut(s)	236, 414, 711, 813, 1016
BseNI	ACTGG	3 cut(s)	670, 1194, 1213
BseXI	GCAGC	9 cut(s)	55, 275, 515, 560, 745, 748, 820, 877, 1213
BsgI	GTGCAG	2 cut(s)	237, 1542
BshFI	GGCC	2 cut(s)	13, 466
BsiHKAI	GWGCWC	1 cut(s)	1003
BsiHKCI	CYCGRG	1 cut(s)	1083
BslFI	GGGAC	2 cut(s)	667, 1541
BslI	CCNNNNNNNGG	1 cut(s)	20
BsmAI	GTCTC	2 cut(s)	694, 1540
BsmFI	GGGAC	2 cut(s)	667, 1541
BsmI	GAATGC	4 cut(s)	451, 550, 1157, 1347
BsnI	GGCC	2 cut(s)	13, 466
Bso31I	GGTCTC	1 cut(s)	1540
BsoBI	CYCGRG	1 cut(s)	1083
Bsp1286I	GDGCHC	1 cut(s)	1003
Bsp143I	GATC	5 cut(s)	43, 378, 433, 786, 1111
BspACI	CCGC	3 cut(s)	449, 736, 1487
BspANI	GGCC	2 cut(s)	13, 466
BspCNI	CTCAG	5 cut(s)	237, 415, 712, 814, 1015
BspHI	TCATGA	2 cut(s)	106, 1240
BspLI	GGNNCC	3 cut(s)	14, 661, 1248
BspMAI	CTGCAG	2 cut(s)	73, 838
BspPI	GGATC	3 cut(s)	51, 441, 794
BspQI	GCTCTTC	1 cut(s)	786
BspTNI	GGTCTC	1 cut(s)	1540
BsrDI	GCAATG	2 cut(s)	1318, 1541
BsrI	ACTGG	3 cut(s)	670, 1194, 1213
BssECI	CCNNGG	3 cut(s)	15, 39, 1417
BssMI	GATC	5 cut(s)	43, 378, 433, 786, 1111
Bst2UI	CCWGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
Bst4CI	ACNGT	1 cut(s)	1039
Bst6I	CTCTTC	1 cut(s)	786
BstAPI	GCANNNNNTGC	1 cut(s)	920
BstC8I	GCNNGC	1 cut(s)	1561
BstDEI	CTNAG	7 cut(s)	245, 423, 624, 720, 822, 1002, 1150
BstF5I	GGATG	5 cut(s)	148, 535, 738, 760, 1446
BstHHI	GCGC	1 cut(s)	772
BstKTI	GATC	5 cut(s)	46, 381, 436, 789, 1114
BstMAI	GTCTC	2 cut(s)	694, 1540
BstMBI	GATC	5 cut(s)	43, 378, 433, 786, 1111
BstMWI	GCNNNNNNNGC	4 cut(s)	224, 512, 767, 920
BstNI	CCWGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
BstSCI	CCNGG	9 cut(s)	15, 39, 308, 438, 868, 1138, 1318, 1416, 1449
BstSFI	CTRYAG	2 cut(s)	69, 834
BstV1I	GCAGC	9 cut(s)	55, 275, 515, 560, 745, 748, 820, 877, 1213
BstV2I	GAAGAC	1 cut(s)	1338
BsuRI	GGCC	2 cut(s)	13, 466
BtgZI	GCGATG	1 cut(s)	76
BtrI	CACGTC	1 cut(s)	1064
BtsCI	GGATG	5 cut(s)	148, 535, 738, 760, 1446
BtsI	GCAGTG	2 cut(s)	570, 964
BtsIMutI	CAGTG	6 cut(s)	420, 570, 663, 704, 907, 964
Cac8I	GCNNGC	1 cut(s)	1561
CaiI	CAGNNNCTG	1 cut(s)	52
CciI	TCATGA	2 cut(s)	106, 1240
CfoI	GCGC	1 cut(s)	772
Cfr13I	GGNCC	5 cut(s)	12, 659, 1035, 1247, 1553
CsiI	ACCWGGT	1 cut(s)	1138
Csp6I	GTAC	2 cut(s)	194, 1040
CviAII	CATG	6 cut(s)	107, 292, 1202, 1214, 1241, 1337
CviQI	GTAC	2 cut(s)	194, 1040
DdeI	CTNAG	7 cut(s)	245, 423, 624, 720, 822, 1002, 1150
DpnI	GATC	5 cut(s)	45, 380, 435, 788, 1113
DpnII	GATC	5 cut(s)	43, 378, 433, 786, 1111
DriI	GACNNNNNGTC	1 cut(s)	1592
Eam1104I	CTCTTC	1 cut(s)	786
Eam1105I	GACNNNNNGTC	1 cut(s)	1592
EarI	CTCTTC	1 cut(s)	786
Ecl136II	GAGCTC	1 cut(s)	1001
Eco24I	GRGCYC	1 cut(s)	1003
Eco31I	GGTCTC	1 cut(s)	1540
Eco47I	GGWCC	4 cut(s)	659, 1035, 1247, 1553
Eco53kI	GAGCTC	1 cut(s)	1001
Eco57I	CTGAAG	2 cut(s)	507, 675
Eco88I	CYCGRG	1 cut(s)	1083
EcoICRI	GAGCTC	1 cut(s)	1001
EcoO109I	RGGNCCY	2 cut(s)	659, 1247
EcoRII	CCWGG	9 cut(s)	15, 39, 308, 438, 868, 1138, 1318, 1416, 1449
EcoT22I	ATGCAT	2 cut(s)	535, 1159
EcoT38I	GRGCYC	1 cut(s)	1003
FaeI	CATG	6 cut(s)	110, 295, 1205, 1217, 1244, 1340
FaqI	GGGAC	2 cut(s)	667, 1541
FatI	CATG	6 cut(s)	106, 291, 1201, 1213, 1240, 1336
FauI	CCCGC	1 cut(s)	442
FauNDI	CATATG	2 cut(s)	469, 1438
FbaI	TGATCA	1 cut(s)	1111
Fnu4HI	GCNGC	9 cut(s)	69, 264, 504, 549, 759, 762, 834, 866, 1227
FokI	GGATG	5 cut(s)	155, 542, 745, 767, 1433
FriOI	GRGCYC	1 cut(s)	1003
Fsp4HI	GCNGC	9 cut(s)	69, 264, 504, 549, 759, 762, 834, 866, 1227
FspBI	CTAG	1 cut(s)	878
GlaI	GCGC	1 cut(s)	771
GluI	GCNGC	9 cut(s)	69, 264, 504, 549, 759, 762, 834, 866, 1227
GsuI	CTGGAG	1 cut(s)	461
HaeIII	GGCC	2 cut(s)	13, 466
HhaI	GCGC	1 cut(s)	772
Hin1II	CATG	6 cut(s)	110, 295, 1205, 1217, 1244, 1340
Hin6I	GCGC	1 cut(s)	770
HinP1I	GCGC	1 cut(s)	770
HincII	GTYRAC	1 cut(s)	1384
HindII	GTYRAC	1 cut(s)	1384
HinfI	GANTC	5 cut(s)	103, 158, 473, 638, 1360
HphI	GGTGA	4 cut(s)	339, 428, 1061, 1530
Hpy166II	GTNNAC	5 cut(s)	196, 559, 1012, 1052, 1384
Hpy188I	TCNGA	7 cut(s)	64, 246, 253, 369, 487, 655, 1353
Hpy188III	TCNNGA	5 cut(s)	107, 162, 848, 1109, 1241
Hpy8I	GTNNAC	5 cut(s)	196, 559, 1012, 1052, 1384
HpyAV	CCTTC	4 cut(s)	650, 722, 1065, 1351
HpyCH4III	ACNGT	1 cut(s)	1039
HpyCH4IV	ACGT	1 cut(s)	1063
HpyF10VI	GCNNNNNNNGC	4 cut(s)	224, 512, 767, 920
HpyF3I	CTNAG	7 cut(s)	245, 423, 624, 720, 822, 1002, 1150
HpySE526I	ACGT	1 cut(s)	1063
Hsp92II	CATG	6 cut(s)	110, 295, 1205, 1217, 1244, 1340
HspAI	GCGC	1 cut(s)	770
Ksp22I	TGATCA	1 cut(s)	1111
Kzo9I	GATC	5 cut(s)	43, 378, 433, 786, 1111
LguI	GCTCTTC	1 cut(s)	786
LmnI	GCTCC	2 cut(s)	998, 1223
Lsp1109I	GCAGC	9 cut(s)	55, 275, 515, 560, 745, 748, 820, 877, 1213
LweI	GCATC	9 cut(s)	55, 99, 236, 520, 542, 706, 723, 745, 1144
MabI	ACCWGGT	1 cut(s)	1138
MaeI	CTAG	1 cut(s)	878
MaeII	ACGT	1 cut(s)	1063
MalI	GATC	5 cut(s)	45, 380, 435, 788, 1113
MboI	GATC	5 cut(s)	43, 378, 433, 786, 1111
MboII	GAAGA	5 cut(s)	51, 86, 803, 1192, 1343
MhlI	GDGCHC	1 cut(s)	1003
MluCI	AATT	8 cut(s)	77, 186, 319, 458, 851, 1407, 1457, 1490
MlyI	GAGTC	2 cut(s)	467, 632
MmeI	TCCRAC	3 cut(s)	411, 507, 969
MnlI	CCTC	9 cut(s)	183, 240, 320, 418, 456, 817, 1237, 1260, 1397
Mph1103I	ATGCAT	2 cut(s)	535, 1159
MroXI	GAANNNNTTC	1 cut(s)	843
MseI	TTAA	3 cut(s)	749, 1232, 1503
MslI	CAYNNNNRTG	4 cut(s)	425, 668, 1047, 1564
MspA1I	CMGCKG	1 cut(s)	266
MspR9I	CCNGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
Mva1269I	GAATGC	4 cut(s)	451, 550, 1157, 1347
MvaI	CCWGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
MwoI	GCNNNNNNNGC	4 cut(s)	224, 512, 767, 920
NdeI	CATATG	2 cut(s)	469, 1438
NdeII	GATC	5 cut(s)	43, 378, 433, 786, 1111
NlaIII	CATG	6 cut(s)	110, 295, 1205, 1217, 1244, 1340
NlaIV	GGNNCC	3 cut(s)	14, 661, 1248
NsiI	ATGCAT	2 cut(s)	535, 1159
OliI	CACNNNNGTG	1 cut(s)	425
PagI	TCATGA	2 cut(s)	106, 1240
PciSI	GCTCTTC	1 cut(s)	786
PctI	GAATGC	4 cut(s)	451, 550, 1157, 1347
PdmI	GAANNNNTTC	1 cut(s)	843
PfeI	GAWTC	3 cut(s)	103, 158, 1360
PflFI	GACNNNGTC	1 cut(s)	1532
PkrI	GCNGC	9 cut(s)	70, 265, 505, 550, 760, 763, 835, 867, 1228
PleI	GAGTC	2 cut(s)	467, 632
PpsI	GAGTC	2 cut(s)	467, 632
PpuMI	RGGWCCY	2 cut(s)	659, 1247
PsiI	TTATAA	1 cut(s)	936
Psp124BI	GAGCTC	1 cut(s)	1003
Psp5II	RGGWCCY	2 cut(s)	659, 1247
Psp6I	CCWGG	9 cut(s)	15, 39, 308, 438, 868, 1138, 1318, 1416, 1449
PspGI	CCWGG	9 cut(s)	15, 39, 308, 438, 868, 1138, 1318, 1416, 1449
PspN4I	GGNNCC	3 cut(s)	14, 661, 1248
PspPI	GGNCC	5 cut(s)	12, 659, 1035, 1247, 1553
PspPPI	RGGWCCY	2 cut(s)	659, 1247
PstI	CTGCAG	2 cut(s)	73, 838
PstNI	CAGNNNCTG	1 cut(s)	52
PsyI	GACNNNGTC	1 cut(s)	1532
PvuII	CAGCTG	1 cut(s)	266
RsaI	GTAC	2 cut(s)	195, 1041
RsaNI	GTAC	2 cut(s)	194, 1040
RseI	CAYNNNNRTG	4 cut(s)	425, 668, 1047, 1564
SacI	GAGCTC	1 cut(s)	1003
SapI	GCTCTTC	1 cut(s)	786
SaqAI	TTAA	3 cut(s)	749, 1232, 1503
SatI	GCNGC	9 cut(s)	69, 264, 504, 549, 759, 762, 834, 866, 1227
Sau3AI	GATC	5 cut(s)	43, 378, 433, 786, 1111
Sau96I	GGNCC	5 cut(s)	12, 659, 1035, 1247, 1553
SchI	GAGTC	2 cut(s)	467, 632
ScrFI	CCNGG	9 cut(s)	17, 41, 310, 440, 870, 1140, 1320, 1418, 1451
SduI	GDGCHC	1 cut(s)	1003
SexAI	ACCWGGT	1 cut(s)	1138
SfaNI	GCATC	9 cut(s)	55, 99, 236, 520, 542, 706, 723, 745, 1144
SfcI	CTRYAG	2 cut(s)	69, 834
SinI	GGWCC	4 cut(s)	659, 1035, 1247, 1553
SmiMI	CAYNNNNRTG	4 cut(s)	425, 668, 1047, 1564
Sse9I	AATT	8 cut(s)	77, 186, 319, 458, 851, 1407, 1457, 1490
SsiI	CCGC	3 cut(s)	449, 736, 1487
SspI	AATATT	1 cut(s)	587
SspMI	CTAG	1 cut(s)	878
SstI	GAGCTC	1 cut(s)	1003
StyD4I	CCNGG	9 cut(s)	15, 39, 308, 438, 868, 1138, 1318, 1416, 1449
TaaI	ACNGT	1 cut(s)	1039
TaiI	ACGT	1 cut(s)	1066
TaqI	TCGA	3 cut(s)	381, 789, 1267
TasI	AATT	8 cut(s)	77, 186, 319, 458, 851, 1407, 1457, 1490
TatI	WGTACW	1 cut(s)	193
TfiI	GAWTC	3 cut(s)	103, 158, 1360
Tru1I	TTAA	3 cut(s)	749, 1232, 1503
Tru9I	TTAA	3 cut(s)	749, 1232, 1503
TscAI	CASTG	6 cut(s)	427, 577, 670, 711, 907, 964
TseI	GCWGC	9 cut(s)	68, 263, 503, 548, 758, 761, 833, 865, 1226
TspDTI	ATGAA	7 cut(s)	159, 261, 315, 984, 1229, 1329, 1344
TspGWI	ACGGA	1 cut(s)	1029
TspRI	CASTG	6 cut(s)	427, 577, 670, 711, 907, 964
Tth111I	GACNNNGTC	1 cut(s)	1532
VpaK11BI	GGWCC	4 cut(s)	659, 1035, 1247, 1553
XapI	RAATTY	3 cut(s)	319, 851, 1490
XmnI	GAANNNNTTC	1 cut(s)	843
XspI	CTAG	1 cut(s)	878
Zsp2I	ATGCAT	2 cut(s)	535, 1159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.