Rmu_sc0002270.1_g000051
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002270.1
Physical Location & Seq
Forward (+)
187581 .. 190872
3292 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002270.1_g000051.1.cds

Sequence Viewer

Length: 1410 bp
atggagcggatcgtcggcggcaagtacaagctcggccgcaagatcggcagcggatcgttcggtgaaatctttctagctactcacgtggacacgttcgagatcgtcgctgttaagatcgagaacagtaagacgaagcatccacagttgctgtatgaggccaagctgtaccatacgcttcaaggaggaagtggtattccgagcataaaatggtcggggatagacggcgaggacaatgtgctggttcttgatctgctgggaccaagtcttgaggatttgtttgtgtattgcgggagaaagttttcgctcaagagtgtcttgctgttagctgatcaaatgattacgaggatagaatatgtgcactcgaaaggttttctgcatagagatataaaacctgataacttccttatgggtcttggtagaaaagcaaatcaggtttacataattgattttggccttgcaaaaagatatcgggactccaccaccaatcgccacattccttatagggagaataaaaacttgacaggaactgctcgttatgctagctgcaacactcatcttggaattgagcaaagccggagggatgatttggagtctcttggatatgttcttctatattttctgagaggaagccttccatggcagggtttaaaagctgccacaaaaaagcaaaaatatgacaaaatttgtgagaagaagttatcaacccctattgaggttctgtgcaaatctcacccagtggagttcgcatcatacttccattactgccactcactgacatttgatcagcgacctgattatggattcttgaaacgtctattccgagacttgtttactcgtgaaggatatgaatttgattacatatttgattggaccatcataaagtaccaacaatcgcaaaagaatagacctcagtctcagttacccccgggtcctggaggaagcaacagtcgtgcaatgccaatgaatgtagataatcatcaaggaggtgctagtgctacttatccatctgaggtgacggatcgaattaaatcaagcaatgccactggtccaggggtccggatgcaatttaaaccaccgacaagcaggaacttaaattacgataatcctcttgaaaagaatattgcacctgaagcatacacacctccgtctacgtcattttctggcacctcaagaaggaatcactccaaacctattttgcctgctgaaactgcaaacactacgcatgtcttcggccaagtgatttacaaggtgtatggtgatttaggaagattgtggtggtgcagctgtggagacattgaatcagttccttggttggtggaagctctcattattttccgtaaggtgactaaaaatgtgttggctgttacaaaatacagaatttccatagcttggattctgtggtgtacatag

Protein Analysis

469

Amino Acids

53.34

Weight (kDa)

9.34

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1163
AccB7I CCANNNNNTGG 1 cut(s) 1389
AccBSI CCGCTC 1 cut(s) 7
AccI GTMKAC 1 cut(s) 1148
AccIII TCCGGA 1 cut(s) 1056
AciI CCGC 5 cut(s) 7, 18, 37, 51, 288
AclWI GGATC 3 cut(s) 17, 61, 1026
AcoI YGGCCR 2 cut(s) 34, 1231
AcsI RAATTY 3 cut(s) 681, 848, 1377
AcuI CTGAAG 1 cut(s) 1149
AcvI CACGTG 1 cut(s) 85
AdeI CACNNNGTG 1 cut(s) 736
AfaI GTAC 4 cut(s) 26, 167, 884, 1405
AfiI CCNNNNNNNGG 6 cut(s) 641, 712, 797, 932, 1173, 1389
AflIII ACRYGT 1 cut(s) 90
AgsI TTSAA 4 cut(s) 179, 808, 1112, 1298
AjnI CCWGG 2 cut(s) 931, 1048
AluBI AGCT 9 cut(s) 31, 77, 163, 326, 543, 653, 1284, 1322, 1388
AluI AGCT 9 cut(s) 31, 77, 163, 326, 543, 653, 1284, 1322, 1388
Alw21I GWGCWC 1 cut(s) 360
Alw26I GTCTC 4 cut(s) 597, 816, 918, 1284
Alw44I GTGCAC 1 cut(s) 356
AlwI GGATC 3 cut(s) 17, 61, 1026
AlwNI CAGNNNCTG 2 cut(s) 148, 527
Ama87I CYCGRG 1 cut(s) 925
Aor13HI TCCGGA 1 cut(s) 1056
AoxI GGCC 4 cut(s) 34, 156, 451, 1231
ApaLI GTGCAC 1 cut(s) 356
ApeKI GCWGC 4 cut(s) 48, 543, 653, 1281
ApoI RAATTY 3 cut(s) 681, 848, 1377
Asp700I GAANNNNTTC 3 cut(s) 69, 298, 1302
AspS9I GGNCC 5 cut(s) 257, 870, 929, 1046, 1054
AsuC2I CCSGG 2 cut(s) 926, 927
AsuHPI GGTGA 5 cut(s) 74, 722, 1024, 1268, 1354
AsuNHI GCTAGC 1 cut(s) 539
AvaI CYCGRG 1 cut(s) 925
AvaII GGWCC 5 cut(s) 257, 870, 929, 1046, 1054
BaeGI GKGCMC 1 cut(s) 360
BanI GGYRCC 1 cut(s) 1163
BauI CACGAG 1 cut(s) 834
BbrPI CACGTG 1 cut(s) 85
BbsI GAAGAC 1 cut(s) 1219
Bbv12I GWGCWC 1 cut(s) 360
BbvI GCAGC 4 cut(s) 60, 530, 640, 1293
BccI CCATC 2 cut(s) 881, 1012
BceAI ACGGC 1 cut(s) 238
BciT130I CCWGG 2 cut(s) 933, 1050
BclI TGATCA 2 cut(s) 328, 781
BcnI CCSGG 2 cut(s) 926, 927
BcoDI GTCTC 4 cut(s) 597, 816, 918, 1284
BfaI CTAG 3 cut(s) 74, 540, 990
BisI GCNGC 6 cut(s) 19, 37, 49, 544, 654, 1282
BlsI GCNGC 6 cut(s) 20, 38, 50, 545, 655, 1283
Bme1390I CCNGG 4 cut(s) 926, 927, 933, 1050
Bme18I GGWCC 5 cut(s) 257, 870, 929, 1046, 1054
BmeT110I CYCGRG 1 cut(s) 925
BmgT120I GGNCC 5 cut(s) 257, 870, 929, 1046, 1054
BmiI GGNNCC 4 cut(s) 258, 930, 1055, 1165
BmrFI CCNGG 4 cut(s) 926, 927, 933, 1050
BmrI ACTGGG 1 cut(s) 728
BmsI GCATC 3 cut(s) 145, 755, 1050
BmtI GCTAGC 1 cut(s) 543
BmuI ACTGGG 1 cut(s) 728
BoxI GACNNNNGTC 1 cut(s) 910
BpiI GAAGAC 1 cut(s) 1219
BpmI CTGGAG 1 cut(s) 954
BpuEI CTTGAG 3 cut(s) 287, 290, 1153
BpuMI CCSGG 2 cut(s) 926, 927
BsaAI YACGTR 1 cut(s) 85
BsaBI GATNNNNATC 1 cut(s) 975
BsaJI CCNNGG 5 cut(s) 635, 924, 925, 1049, 1307
BsaWI WCCGGW 1 cut(s) 1056
Bsc4I CCNNNNNNNGG 6 cut(s) 641, 712, 797, 932, 1173, 1389
Bse1I ACTGG 2 cut(s) 734, 1048
Bse3DI GCAATG 2 cut(s) 960, 1042
Bse8I GATNNNNATC 1 cut(s) 975
BseAI TCCGGA 1 cut(s) 1056
BseBI CCWGG 2 cut(s) 933, 1050
BseDI CCNNGG 5 cut(s) 635, 924, 925, 1049, 1307
BseGI GGATG 3 cut(s) 136, 586, 1065
BseJI GATNNNNATC 1 cut(s) 975
BseLI CCNNNNNNNGG 6 cut(s) 641, 712, 797, 932, 1173, 1389
BseMI GCAATG 2 cut(s) 960, 1042
BseMII CTCAG 4 cut(s) 611, 923, 929, 999
BseNI ACTGG 2 cut(s) 734, 1048
BseSI GKGCMC 1 cut(s) 360
BseX3I CGGCCG 1 cut(s) 34
BseXI GCAGC 4 cut(s) 60, 530, 640, 1293
BseYI CCCAGC 1 cut(s) 253
BsgI GTGCAG 1 cut(s) 1300
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 4 cut(s) 36, 158, 453, 1233
BshNI GGYRCC 1 cut(s) 1163
BsiEI CGRYCG 1 cut(s) 37
BsiHKAI GWGCWC 1 cut(s) 360
BsiHKCI CYCGRG 1 cut(s) 925
BsiSI CCGG 3 cut(s) 574, 926, 1057
BslFI GGGAC 2 cut(s) 270, 485
BslI CCNNNNNNNGG 6 cut(s) 641, 712, 797, 932, 1173, 1389
BsmAI GTCTC 4 cut(s) 597, 816, 918, 1284
BsmFI GGGAC 2 cut(s) 270, 485
BsnI GGCC 4 cut(s) 36, 158, 453, 1233
BsoBI CYCGRG 1 cut(s) 925
Bsp1286I GDGCHC 1 cut(s) 360
Bsp13I TCCGGA 1 cut(s) 1056
Bsp1407I TGTACA 1 cut(s) 1403
Bsp143I GATC 9 cut(s) 9, 42, 53, 99, 114, 247, 328, 781, 1018
Bsp19I CCATGG 1 cut(s) 635
BspACI CCGC 5 cut(s) 7, 18, 37, 51, 288
BspANI GGCC 4 cut(s) 36, 158, 453, 1233
BspCNI CTCAG 4 cut(s) 612, 922, 928, 1000
BspEI TCCGGA 1 cut(s) 1056
BspLI GGNNCC 4 cut(s) 258, 930, 1055, 1165
BspOI GCTAGC 1 cut(s) 543
BspPI GGATC 3 cut(s) 17, 61, 1026
BspT107I GGYRCC 1 cut(s) 1163
BsrBI CCGCTC 1 cut(s) 7
BsrDI GCAATG 2 cut(s) 960, 1042
BsrGI TGTACA 1 cut(s) 1403
BsrI ACTGG 2 cut(s) 734, 1048
BssECI CCNNGG 5 cut(s) 635, 924, 925, 1049, 1307
BssMI GATC 9 cut(s) 9, 42, 53, 99, 114, 247, 328, 781, 1018
BssSI CACGAG 1 cut(s) 834
BssT1I CCWWGG 2 cut(s) 635, 1307
Bst2BI CACGAG 1 cut(s) 834
Bst2UI CCWGG 2 cut(s) 933, 1050
Bst4CI ACNGT 3 cut(s) 125, 144, 947
BstAUI TGTACA 1 cut(s) 1403
BstBAI YACGTR 1 cut(s) 85
BstC8I GCNNGC 2 cut(s) 541, 1200
BstDEI CTNAG 4 cut(s) 620, 909, 915, 1008
BstDSI CCRYGG 1 cut(s) 635
BstENI CCTNNNNNAGG 1 cut(s) 1171
BstF5I GGATG 3 cut(s) 136, 586, 1065
BstKTI GATC 9 cut(s) 12, 45, 56, 102, 117, 250, 331, 784, 1021
BstMAI GTCTC 4 cut(s) 597, 816, 918, 1284
BstMBI GATC 9 cut(s) 9, 42, 53, 99, 114, 247, 328, 781, 1018
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 4 cut(s) 45, 536, 1130, 1208
BstNI CCWGG 2 cut(s) 933, 1050
BstNSI RCATGY 1 cut(s) 1226
BstPAI GACNNNNGTC 1 cut(s) 910
BstSCI CCNGG 4 cut(s) 924, 925, 931, 1048
BstSLI GKGCMC 1 cut(s) 360
BstV1I GCAGC 4 cut(s) 60, 530, 640, 1293
BstV2I GAAGAC 1 cut(s) 1219
BstZI CGGCCG 1 cut(s) 34
BsuRI GGCC 4 cut(s) 36, 158, 453, 1233
BtgI CCRYGG 1 cut(s) 635
BtsCI GGATG 3 cut(s) 136, 586, 1065
BtsIMutI CAGTG 3 cut(s) 741, 770, 1041
Cac8I GCNNGC 2 cut(s) 541, 1200
CaiI CAGNNNCTG 2 cut(s) 148, 527
Cfr13I GGNCC 5 cut(s) 257, 870, 929, 1046, 1054
Cfr9I CCCGGG 1 cut(s) 925
Csp6I GTAC 4 cut(s) 25, 166, 883, 1404
CviAII CATG 2 cut(s) 636, 1223
CviQI GTAC 4 cut(s) 25, 166, 883, 1404
DdeI CTNAG 4 cut(s) 620, 909, 915, 1008
DpnI GATC 9 cut(s) 11, 44, 55, 101, 116, 249, 330, 783, 1020
DpnII GATC 9 cut(s) 9, 42, 53, 99, 114, 247, 328, 781, 1018
DraI TTTAAA 2 cut(s) 648, 1069
DraIII CACNNNGTG 1 cut(s) 736
EaeI YGGCCR 2 cut(s) 34, 1231
EagI CGGCCG 1 cut(s) 34
EclXI CGGCCG 1 cut(s) 34
Eco130I CCWWGG 2 cut(s) 635, 1307
Eco32I GATATC 1 cut(s) 467
Eco47I GGWCC 5 cut(s) 257, 870, 929, 1046, 1054
Eco52I CGGCCG 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 1149
Eco72I CACGTG 1 cut(s) 85
Eco88I CYCGRG 1 cut(s) 925
EcoNI CCTNNNNNAGG 1 cut(s) 1171
EcoO109I RGGNCCY 1 cut(s) 929
EcoRII CCWGG 2 cut(s) 931, 1048
EcoRV GATATC 1 cut(s) 467
EcoT14I CCWWGG 2 cut(s) 635, 1307
ErhI CCWWGG 2 cut(s) 635, 1307
FaeI CATG 2 cut(s) 639, 1226
FalI AAGNNNNNCTT 2 cut(s) 299, 331
FaqI GGGAC 2 cut(s) 270, 485
FatI CATG 2 cut(s) 635, 1222
FauI CCCGC 1 cut(s) 281
FbaI TGATCA 2 cut(s) 328, 781
FblI GTMKAC 1 cut(s) 1148
Fnu4HI GCNGC 6 cut(s) 19, 37, 49, 544, 654, 1282
FokI GGATG 3 cut(s) 123, 593, 1072
Fsp4HI GCNGC 6 cut(s) 19, 37, 49, 544, 654, 1282
FspBI CTAG 3 cut(s) 74, 540, 990
GluI GCNGC 6 cut(s) 19, 37, 49, 544, 654, 1282
GsaI CCCAGC 1 cut(s) 257
GsuI CTGGAG 1 cut(s) 954
HaeIII GGCC 4 cut(s) 36, 158, 453, 1233
HapII CCGG 3 cut(s) 574, 926, 1057
Hin1II CATG 2 cut(s) 639, 1226
HinfI GANTC 6 cut(s) 473, 590, 801, 1177, 1298, 1393
HpaII CCGG 3 cut(s) 574, 926, 1057
HphI GGTGA 5 cut(s) 74, 722, 1024, 1268, 1354
Hpy166II GTNNAC 6 cut(s) 88, 358, 436, 831, 1149, 1404
Hpy188I TCNGA 4 cut(s) 198, 621, 821, 1009
Hpy8I GTNNAC 6 cut(s) 88, 358, 436, 831, 1149, 1404
Hpy99I CGWCG 2 cut(s) 17, 107
HpyAV CCTTC 3 cut(s) 641, 833, 1167
HpyCH4III ACNGT 3 cut(s) 125, 144, 947
HpyCH4IV ACGT 4 cut(s) 84, 92, 811, 1151
HpyF10VI GCNNNNNNNGC 4 cut(s) 45, 536, 1130, 1208
HpyF3I CTNAG 4 cut(s) 620, 909, 915, 1008
HpySE526I ACGT 4 cut(s) 84, 92, 811, 1151
Hsp92II CATG 2 cut(s) 639, 1226
Kpn2I TCCGGA 1 cut(s) 1056
Ksp22I TGATCA 2 cut(s) 328, 781
Kzo9I GATC 9 cut(s) 9, 42, 53, 99, 114, 247, 328, 781, 1018
LmnI GCTCC 1 cut(s) 4
Lsp1109I GCAGC 4 cut(s) 60, 530, 640, 1293
LweI GCATC 3 cut(s) 145, 755, 1050
MaeI CTAG 3 cut(s) 74, 540, 990
MaeII ACGT 4 cut(s) 84, 92, 811, 1151
MaeIII GTNAC 4 cut(s) 918, 1012, 1342, 1363
MalI GATC 9 cut(s) 11, 44, 55, 101, 116, 249, 330, 783, 1020
MbiI CCGCTC 1 cut(s) 7
MboI GATC 9 cut(s) 9, 42, 53, 99, 114, 247, 328, 781, 1018
MboII GAAGA 4 cut(s) 599, 703, 1219, 1278
MhlI GDGCHC 1 cut(s) 360
MluCI AATT 8 cut(s) 441, 561, 681, 848, 1023, 1064, 1093, 1377
MlyI GAGTC 2 cut(s) 467, 599
MroI TCCGGA 1 cut(s) 1056
MroXI GAANNNNTTC 3 cut(s) 69, 298, 1302
MseI TTAA 5 cut(s) 111, 647, 1026, 1068, 1091
MspA1I CMGCKG 2 cut(s) 51, 1284
MspI CCGG 3 cut(s) 574, 926, 1057
MspR9I CCNGG 4 cut(s) 926, 927, 933, 1050
MvaI CCWGG 2 cut(s) 933, 1050
MwoI GCNNNNNNNGC 4 cut(s) 45, 536, 1130, 1208
NciI CCSGG 2 cut(s) 926, 927
NcoI CCATGG 1 cut(s) 635
NdeII GATC 9 cut(s) 9, 42, 53, 99, 114, 247, 328, 781, 1018
NheI GCTAGC 1 cut(s) 539
NlaIII CATG 2 cut(s) 639, 1226
NlaIV GGNNCC 4 cut(s) 258, 930, 1055, 1165
NmeAIII GCCGAG 1 cut(s) 12
NmuCI GTSAC 2 cut(s) 1012, 1342
NspI RCATGY 1 cut(s) 1226
PcsI WCGNNNNNNNCGW 1 cut(s) 817
PdmI GAANNNNTTC 3 cut(s) 69, 298, 1302
PfeI GAWTC 4 cut(s) 801, 1177, 1298, 1393
PflFI GACNNNGTC 1 cut(s) 261
PflMI CCANNNNNTGG 1 cut(s) 1389
PfoI TCCNGGA 1 cut(s) 931
PkrI GCNGC 6 cut(s) 20, 38, 50, 545, 655, 1283
PleI GAGTC 2 cut(s) 467, 598
PmaCI CACGTG 1 cut(s) 85
PmlI CACGTG 1 cut(s) 85
PpsI GAGTC 2 cut(s) 467, 598
Ppu21I YACGTR 1 cut(s) 85
PpuMI RGGWCCY 1 cut(s) 929
PshAI GACNNNNGTC 1 cut(s) 910
Psp5II RGGWCCY 1 cut(s) 929
Psp6I CCWGG 2 cut(s) 931, 1048
PspCI CACGTG 1 cut(s) 85
PspFI CCCAGC 1 cut(s) 253
PspGI CCWGG 2 cut(s) 931, 1048
PspN4I GGNNCC 4 cut(s) 258, 930, 1055, 1165
PspPI GGNCC 5 cut(s) 257, 870, 929, 1046, 1054
PspPPI RGGWCCY 1 cut(s) 929
PsrI GAACNNNNNNTAC 2 cut(s) 1079, 1111
PstNI CAGNNNCTG 2 cut(s) 148, 527
PsyI GACNNNGTC 1 cut(s) 261
PvuII CAGCTG 1 cut(s) 1284
RsaI GTAC 4 cut(s) 26, 167, 884, 1405
RsaNI GTAC 4 cut(s) 25, 166, 883, 1404
SaqAI TTAA 5 cut(s) 111, 647, 1026, 1068, 1091
SatI GCNGC 6 cut(s) 19, 37, 49, 544, 654, 1282
Sau3AI GATC 9 cut(s) 9, 42, 53, 99, 114, 247, 328, 781, 1018
Sau96I GGNCC 5 cut(s) 257, 870, 929, 1046, 1054
SchI GAGTC 2 cut(s) 467, 599
ScrFI CCNGG 4 cut(s) 926, 927, 933, 1050
SduI GDGCHC 1 cut(s) 360
SfaNI GCATC 3 cut(s) 145, 755, 1050
SinI GGWCC 5 cut(s) 257, 870, 929, 1046, 1054
SmaI CCCGGG 1 cut(s) 927
SmlI CTYRAG 3 cut(s) 266, 305, 1168
SmoI CTYRAG 3 cut(s) 266, 305, 1168
Sse9I AATT 8 cut(s) 441, 561, 681, 848, 1023, 1064, 1093, 1377
SsiI CCGC 5 cut(s) 7, 18, 37, 51, 288
SspI AATATT 1 cut(s) 1120
SspMI CTAG 3 cut(s) 74, 540, 990
StyD4I CCNGG 4 cut(s) 924, 925, 931, 1048
StyI CCWWGG 2 cut(s) 635, 1307
TaaI ACNGT 3 cut(s) 125, 144, 947
TaiI ACGT 4 cut(s) 87, 95, 814, 1154
TaqI TCGA 4 cut(s) 96, 117, 362, 1021
TasI AATT 8 cut(s) 441, 561, 681, 848, 1023, 1064, 1093, 1377
TatI WGTACW 2 cut(s) 24, 1403
TauI GCSGC 2 cut(s) 21, 39
TfiI GAWTC 4 cut(s) 801, 1177, 1298, 1393
Tru1I TTAA 5 cut(s) 111, 647, 1026, 1068, 1091
Tru9I TTAA 5 cut(s) 111, 647, 1026, 1068, 1091
TscAI CASTG 3 cut(s) 741, 777, 1048
TseFI GTSAC 2 cut(s) 1012, 1342
TseI GCWGC 4 cut(s) 48, 543, 653, 1281
Tsp45I GTSAC 2 cut(s) 1012, 1342
TspDTI ATGAA 2 cut(s) 861, 977
TspGWI ACGGA 3 cut(s) 1031, 1134, 1325
TspMI CCCGGG 1 cut(s) 925
TspRI CASTG 3 cut(s) 741, 777, 1048
Tth111I GACNNNGTC 1 cut(s) 261
Van91I CCANNNNNTGG 1 cut(s) 1389
VneI GTGCAC 1 cut(s) 356
VpaK11BI GGWCC 5 cut(s) 257, 870, 929, 1046, 1054
XagI CCTNNNNNAGG 1 cut(s) 1171
XapI RAATTY 3 cut(s) 681, 848, 1377
XceI RCATGY 1 cut(s) 1226
XmaI CCCGGG 1 cut(s) 925
XmiI GTMKAC 1 cut(s) 1148
XmnI GAANNNNTTC 3 cut(s) 69, 298, 1302
XspI CTAG 3 cut(s) 74, 540, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.