Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002344.1

Orthogroup ID

OG0010462

Physical Location & Seq

Genomic Coordinates Forward (+)

15330 .. 19288

Gene Structure 3959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

atggacggagaagaagaggaagccacagtatctctagacttccctctcttcaaacccagagcatctaaacccgcccagaaacccgacccggatccgataacccatgccgccgccgaaccggaccttgagaggtccgcagacccggacgcgaactccgacgccaagttcaccgatctcggcctcgccgactggctgctccggacggtcgccgagctcggtctgaagaagccgacgccggtccaggcgaactgcatccccaaaatcctggagggccgggacgtgctgggcctggcccagaccggtagcggcaagacggcggcgttcgcgctgccgattctgcagcggctggcggaggggccgtatggggttttcgcgctggtgatgacgccgacgcatgagctggcgtaccagctcgccgagcagttcagggctttcgggtcgtcgctgcatttgaggtgctcggtgattgttggaggtatggataagctgaatcaagctcagagcttgatgagtaggccccatgtggtgattgccacgcccggtagggttagggatttgcttcaggaggaccctgatttcccctctgttttctccaaggccaagtttctagtgctggatgaagcagataggttattgaatgctgaatttgaggccgatttgagagtggtgtttcagtgcttgccgaagaatcggcagactctgttgttttctgcaacaatgactagtgacctgcaagcactgattgaagtttctgcaaataaggcgtacttttaccaggcttatgaaggtctcaggacggttggtactcttgcgcagaaatatgttttcataccccgtgaagcgaaagaagtttatttggtgtatattttgtccaaaatgaaagatatgggtattcgttcagccattgtgtttgtctcaaccctatggaattgtcacttattgaattttttactggaggagcttggtcaaagtgtttcagcgttgcactcatccaaatcccagcctcttagactttctgcattacataagttcaaatctggacaggttccagtgttgattgcaactgatcttgccaatcgtggtttggatattcctacggttgacctagtaatcaattatgatattccaagtgatccaaaggattatgttcaccgtgtgggacgtactgcaagagcaggcagaggaggtttagctgtcagtgttgttactcaacttgatgtaaagctgcttcataaaatagaagaagaagttggggaacagttggtagaatttgaatgcaaggagaacgaggttcttgaggatattcgtaaggtttacacagccaggcgtgtcgcaaagatgaagatgatggaatccaactttgtagaaagagagaaaaaacggaaagaacgaacactaaagacgctagaagcgaaagaggaggacaccgtccaagaaaagaagaatatctccctgaagacctccgatgatgagatcttcgaattggaggaggacgtggcgatggagttcggaaccgtcaaggccttctttggagacgatggggtctcccgagacatggtgatgcctatacctaacgtgcacagcaaggaactgacgaggatcattgacttctgcaccaagcatctcgccttgaagccgaaggcggagcacgacgaggccgggaagaaggagctgaggaagttctatgctgagtacgtgaaggaggacaccaccgagcgcataatggagctgattctggcagctgattatttgaatgtgaatgacttgctggacttgttgaaccagtccgtggcggaccggatcaagaacaagagtgtggagtatgtaaggaagttgtttgggattgagagcgattttactcccgaggaggaggcagcgctccgggaggagtatgcctgggcttttgagggggttgatgaagactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009553 GO:0009561 GO:0009791 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022613 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042623 GO:0042995 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0090406 GO:0120025 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

641

Amino Acids

72.03

Weight (kDa)

5.18

Isoelectric Point (pI)

36.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	76 - 240	1.9e-06	Type III restriction enzyme, res subunit
DEAD	PF00270	78 - 246	2e-47	DEAD/DEAH box helicase
Helicase_C	PF00271	295 - 393	2e-26	Helicase conserved C-terminal domain
Skp1_POZ	PF03931	482 - 542	8.2e-13	Skp1 family, tetramerisation domain
Skp1	PF01466	588 - 634	4.3e-20	Skp1 family, dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16280
fragaria_vesca	FvH4_3g14750 FvH4_3g14750 FvH4_3g14750
malus_domestica	MD10G1209000.v1.1
prunus_persica	Prupe.4G132500_v2.0.a1
pyrus_communis	pycom10g17780 pycom13g14880
rosa_chinensis	RchiOBHm_Chr5g0024261
rosa_laevigata	RLG00000032788
rosa_multiflora	Rmu_sc0002344.1_g000004 Rmu_sc0018255.1_g000002
rosa_roxburghii	Rroxscaffold_1G00054920 Rroxscaffold_1G00055760
rosa_rugosa	Rorug05G0082900
rosa_samantha	Rh5AG173300 Rh5BG170200 Rh5CG186300 Rh5DG172800
rosa_wichuraiana	Rw0G000850 Rw5G015650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1541
Acc16I	TGCGCA	1 cut(s)	813
Acc36I	ACCTGC	1 cut(s)	738
AccB7I	CCANNNNNTGG	1 cut(s)	1789
AccII	CGCG	3 cut(s)	149, 326, 374
AccIII	TCCGGA	1 cut(s)	198
AclWI	GGATC	5 cut(s)	86, 99, 1127, 1607, 1808
AcsI	RAATTY	3 cut(s)	644, 943, 1268
AcuI	CTGAAG	3 cut(s)	242, 545, 1475
AcyI	GRCGYC	3 cut(s)	159, 233, 386
AdeI	CACNNNGTG	1 cut(s)	1156
AfaI	GTAC	5 cut(s)	407, 767, 805, 1165, 1694
AfeI	AGCGCT	1 cut(s)	1878
AfiI	CCNNNNNNNGG	2 cut(s)	1555, 1789
AgeI	ACCGGT	1 cut(s)	299
AgsI	TTSAA	9 cut(s)	52, 637, 746, 943, 1033, 1274, 1633, 1753, 1780
AhlI	ACTAGT	1 cut(s)	722
AjiI	CACGTC	2 cut(s)	280, 1495
AjnI	CCWGG	6 cut(s)	240, 264, 288, 774, 1322, 1895
AjuI	GAANNNNNNNTTGG	2 cut(s)	1233, 1265
Alw21I	GWGCWC	4 cut(s)	216, 461, 1581, 1650
Alw26I	GTCTC	5 cut(s)	794, 919, 1527, 1545, 1549
Alw44I	GTGCAC	1 cut(s)	1577
AlwI	GGATC	5 cut(s)	86, 99, 1127, 1607, 1808
AlwNI	CAGNNNCTG	2 cut(s)	346, 700
Ama87I	CYCGRG	2 cut(s)	1548, 1862
Aor13HI	TCCGGA	1 cut(s)	198
Aor51HI	AGCGCT	1 cut(s)	1878
ApaLI	GTGCAC	1 cut(s)	1577
ApeKI	GCWGC	7 cut(s)	193, 328, 340, 445, 1225, 1739, 1874
ApoI	RAATTY	3 cut(s)	644, 943, 1268
AsiGI	ACCGGT	1 cut(s)	299
AspLEI	GCGC	5 cut(s)	328, 376, 814, 1719, 1879
AsuC2I	CCSGG	6 cut(s)	89, 143, 275, 540, 1660, 1883
AsuHPI	GGTGA	6 cut(s)	160, 391, 475, 538, 1142, 1570
AsuII	TTCGAA	1 cut(s)	1479
AvaI	CYCGRG	2 cut(s)	1548, 1862
AvaII	GGWCC	5 cut(s)	121, 132, 238, 568, 1795
BaeGI	GKGCMC	1 cut(s)	1581
BamHI	GGATCC	1 cut(s)	91
BanII	GRGCYC	1 cut(s)	216
BarI	GAAGNNNNNNTAC	2 cut(s)	1212, 1244
BbsI	GAAGAC	1 cut(s)	1463
Bbv12I	GWGCWC	4 cut(s)	216, 461, 1581, 1650
BbvCI	CCTCAGC	1 cut(s)	1673
BbvI	GCAGC	7 cut(s)	180, 315, 352, 432, 1212, 1751, 1886
BccI	CCATC	3 cut(s)	1342, 1495, 1532
BceAI	ACGGC	2 cut(s)	330, 343
BciT130I	CCWGG	6 cut(s)	242, 266, 290, 776, 1324, 1897
BcnI	CCSGG	6 cut(s)	89, 143, 275, 540, 1660, 1883
BcoDI	GTCTC	5 cut(s)	794, 919, 1527, 1545, 1549
BcuI	ACTAGT	1 cut(s)	722
BfaI	CTAG	5 cut(s)	35, 608, 723, 1106, 1406
BfmI	CTRYAG	1 cut(s)	338
BfoI	RGCGCY	1 cut(s)	1880
BfuAI	ACCTGC	1 cut(s)	738
BglII	AGATCT	1 cut(s)	1473
Bme18I	GGWCC	5 cut(s)	121, 132, 238, 568, 1795
BmeT110I	CYCGRG	2 cut(s)	1548, 1862
BmgBI	CACGTC	2 cut(s)	280, 1495
BmiI	GGNNCC	6 cut(s)	93, 357, 518, 570, 1047, 1513
BmsI	GCATC	4 cut(s)	71, 261, 1551, 1630
BoxI	GACNNNNGTC	1 cut(s)	236
BpiI	GAAGAC	1 cut(s)	1463
BpmI	CTGGAG	2 cut(s)	287, 974
Bpu10I	CCTNAGC	1 cut(s)	1673
Bpu14I	TTCGAA	1 cut(s)	1479
BpuEI	CTTGAG	2 cut(s)	146, 1316
BpuMI	CCSGG	6 cut(s)	89, 143, 275, 540, 1660, 1883
BsaAI	YACGTR	1 cut(s)	1696
BsaHI	GRCGYC	3 cut(s)	159, 233, 386
BsaI	GGTCTC	2 cut(s)	794, 1549
BsaJI	CCNNGG	4 cut(s)	594, 1788, 1863, 1896
BsaWI	WCCGGW	4 cut(s)	118, 198, 299, 1797
BsaXI	ACNNNNNCTCC	4 cut(s)	137, 167, 344, 374
Bsc4I	CCNNNNNNNGG	2 cut(s)	1555, 1789
Bse118I	RCCGGY	2 cut(s)	235, 299
Bse1I	ACTGG	4 cut(s)	194, 957, 1049, 1783
BseAI	TCCGGA	1 cut(s)	198
BseBI	CCWGG	6 cut(s)	242, 266, 290, 776, 1324, 1897
BseDI	CCNNGG	4 cut(s)	594, 1788, 1863, 1896
BseGI	GGATG	3 cut(s)	252, 622, 989
BseLI	CCNNNNNNNGG	2 cut(s)	1555, 1789
BseMII	CTCAG	4 cut(s)	512, 805, 1664, 1680
BseNI	ACTGG	4 cut(s)	194, 957, 1049, 1783
BseRI	GAGGAG	7 cut(s)	971, 1197, 1433, 1502, 1880, 1883, 1901
BseSI	GKGCMC	1 cut(s)	1581
BseXI	GCAGC	7 cut(s)	180, 315, 352, 432, 1212, 1751, 1886
BseYI	CCCAGC	2 cut(s)	283, 999
BsgI	GTGCAG	1 cut(s)	1597
Bsh1236I	CGCG	3 cut(s)	149, 326, 374
Bsh1285I	CGRYCG	1 cut(s)	207
BshTI	ACCGGT	1 cut(s)	299
BsiEI	CGRYCG	1 cut(s)	207
BsiHKAI	GWGCWC	4 cut(s)	216, 461, 1581, 1650
BsiHKCI	CYCGRG	2 cut(s)	1548, 1862
BslFI	GGGAC	2 cut(s)	290, 1173
BslI	CCNNNNNNNGG	2 cut(s)	1555, 1789
BsmAI	GTCTC	5 cut(s)	794, 919, 1527, 1545, 1549
BsmBI	CGTCTC	1 cut(s)	1527
BsmFI	GGGAC	2 cut(s)	290, 1173
BsmI	GAATGC	2 cut(s)	643, 1280
Bso31I	GGTCTC	2 cut(s)	794, 1549
BsoBI	CYCGRG	2 cut(s)	1548, 1862
Bsp119I	TTCGAA	1 cut(s)	1479
Bsp1286I	GDGCHC	4 cut(s)	216, 461, 1581, 1650
Bsp13I	TCCGGA	1 cut(s)	198
Bsp143I	GATC	7 cut(s)	91, 172, 1066, 1132, 1473, 1599, 1800
BspCNI	CTCAG	4 cut(s)	511, 804, 1665, 1681
BspEI	TCCGGA	1 cut(s)	198
BspFNI	CGCG	3 cut(s)	149, 326, 374
BspLI	GGNNCC	6 cut(s)	93, 357, 518, 570, 1047, 1513
BspMAI	CTGCAG	1 cut(s)	342
BspMI	ACCTGC	1 cut(s)	738
BspPI	GGATC	5 cut(s)	86, 99, 1127, 1607, 1808
BspT104I	TTCGAA	1 cut(s)	1479
BspTNI	GGTCTC	2 cut(s)	794, 1549
BsrFI	RCCGGY	2 cut(s)	235, 299
BsrI	ACTGG	4 cut(s)	194, 957, 1049, 1783
BssAI	RCCGGY	2 cut(s)	235, 299
BssECI	CCNNGG	4 cut(s)	594, 1788, 1863, 1896
BssMI	GATC	7 cut(s)	91, 172, 1066, 1132, 1473, 1599, 1800
BssNI	GRCGYC	3 cut(s)	159, 233, 386
BssT1I	CCWWGG	1 cut(s)	594
Bst2UI	CCWGG	6 cut(s)	242, 266, 290, 776, 1324, 1897
Bst4CI	ACNGT	8 cut(s)	28, 205, 799, 1099, 1154, 1260, 1429, 1516
Bst6I	CTCTTC	2 cut(s)	9, 53
BstACI	GRCGYC	3 cut(s)	159, 233, 386
BstBAI	YACGTR	1 cut(s)	1696
BstBI	TTCGAA	1 cut(s)	1479
BstC8I	GCNNGC	6 cut(s)	348, 402, 414, 680, 735, 1177
BstDEI	CTNAG	5 cut(s)	498, 791, 1007, 1673, 1689
BstDSI	CCRYGG	1 cut(s)	1788
BstF5I	GGATG	3 cut(s)	252, 622, 989
BstFNI	CGCG	3 cut(s)	149, 326, 374
BstH2I	RGCGCY	1 cut(s)	1880
BstHHI	GCGC	5 cut(s)	328, 376, 814, 1719, 1879
BstKTI	GATC	7 cut(s)	94, 175, 1069, 1135, 1476, 1602, 1803
BstMAI	GTCTC	5 cut(s)	794, 919, 1527, 1545, 1549
BstMBI	GATC	7 cut(s)	91, 172, 1066, 1132, 1473, 1599, 1800
BstMCI	CGRYCG	1 cut(s)	207
BstMWI	GCNNNNNNNGC	4 cut(s)	323, 337, 418, 761
BstNI	CCWGG	6 cut(s)	242, 266, 290, 776, 1324, 1897
BstPAI	GACNNNNGTC	1 cut(s)	236
BstSFI	CTRYAG	1 cut(s)	338
BstSLI	GKGCMC	1 cut(s)	1581
BstUI	CGCG	3 cut(s)	149, 326, 374
BstV1I	GCAGC	7 cut(s)	180, 315, 352, 432, 1212, 1751, 1886
BstV2I	GAAGAC	1 cut(s)	1463
BstX2I	RGATCY	2 cut(s)	91, 1473
BstXI	CCANNNNNNTGG	1 cut(s)	265
BstYI	RGATCY	2 cut(s)	91, 1473
BtgI	CCRYGG	1 cut(s)	1788
BtgZI	GCGATG	1 cut(s)	1514
BtrI	CACGTC	2 cut(s)	280, 1495
BtsCI	GGATG	3 cut(s)	252, 622, 989
BtsIMutI	CAGTG	4 cut(s)	680, 737, 1056, 1204
BveI	ACCTGC	1 cut(s)	738
Cac8I	GCNNGC	6 cut(s)	348, 402, 414, 680, 735, 1177
CaiI	CAGNNNCTG	2 cut(s)	346, 700
CfoI	GCGC	5 cut(s)	328, 376, 814, 1719, 1879
Cfr10I	RCCGGY	2 cut(s)	235, 299
CpoI	CGGWCCG	1 cut(s)	1795
CseI	GACGC	6 cut(s)	155, 167, 241, 394, 400, 1411
Csp6I	GTAC	5 cut(s)	406, 766, 804, 1164, 1693
CspAI	ACCGGT	1 cut(s)	299
CspI	CGGWCCG	1 cut(s)	1795
CviAII	CATG	4 cut(s)	104, 395, 521, 1555
CviQI	GTAC	5 cut(s)	406, 766, 804, 1164, 1693
DdeI	CTNAG	5 cut(s)	498, 791, 1007, 1673, 1689
DpnI	GATC	7 cut(s)	93, 174, 1068, 1134, 1475, 1601, 1802
DpnII	GATC	7 cut(s)	91, 172, 1066, 1132, 1473, 1599, 1800
DraIII	CACNNNGTG	1 cut(s)	1156
DrdI	GACNNNNNNGTC	1 cut(s)	1541
DseDI	GACNNNNNNGTC	1 cut(s)	1541
Eam1104I	CTCTTC	2 cut(s)	9, 53
EarI	CTCTTC	2 cut(s)	9, 53
EciI	GGCGGA	3 cut(s)	365, 1658, 1808
Ecl136II	GAGCTC	1 cut(s)	214
Eco130I	CCWWGG	1 cut(s)	594
Eco147I	AGGCCT	1 cut(s)	1523
Eco24I	GRGCYC	1 cut(s)	216
Eco31I	GGTCTC	2 cut(s)	794, 1549
Eco47I	GGWCC	5 cut(s)	121, 132, 238, 568, 1795
Eco47III	AGCGCT	1 cut(s)	1878
Eco53kI	GAGCTC	1 cut(s)	214
Eco57I	CTGAAG	3 cut(s)	242, 545, 1475
Eco88I	CYCGRG	2 cut(s)	1548, 1862
EcoICRI	GAGCTC	1 cut(s)	214
EcoO109I	RGGNCCY	2 cut(s)	516, 568
EcoRII	CCWGG	6 cut(s)	240, 264, 288, 774, 1322, 1895
EcoT14I	CCWWGG	1 cut(s)	594
EcoT38I	GRGCYC	1 cut(s)	216
ErhI	CCWWGG	1 cut(s)	594
Esp3I	CGTCTC	1 cut(s)	1527
FaeI	CATG	4 cut(s)	107, 398, 524, 1558
FalI	AAGNNNNNCTT	4 cut(s)	752, 784, 1511, 1543
FaqI	GGGAC	2 cut(s)	290, 1173
FatI	CATG	4 cut(s)	103, 394, 520, 1554
FauI	CCCGC	1 cut(s)	79
FokI	GGATG	3 cut(s)	239, 629, 976
FriOI	GRGCYC	1 cut(s)	216
FspBI	CTAG	5 cut(s)	35, 608, 723, 1106, 1406
FspI	TGCGCA	1 cut(s)	813
GlaI	GCGC	5 cut(s)	327, 375, 813, 1718, 1878
GsaI	CCCAGC	2 cut(s)	287, 1003
GsuI	CTGGAG	2 cut(s)	287, 974
HaeII	RGCGCY	1 cut(s)	1880
HgaI	GACGC	6 cut(s)	155, 167, 241, 394, 400, 1411
HhaI	GCGC	5 cut(s)	328, 376, 814, 1719, 1879
Hin1I	GRCGYC	3 cut(s)	159, 233, 386
Hin1II	CATG	4 cut(s)	107, 398, 524, 1558
Hin6I	GCGC	5 cut(s)	326, 374, 812, 1717, 1877
HinP1I	GCGC	5 cut(s)	326, 374, 812, 1717, 1877
HincII	GTYRAC	1 cut(s)	1102
HindII	GTYRAC	1 cut(s)	1102
HinfI	GANTC	6 cut(s)	334, 490, 688, 697, 1352, 1732
HphI	GGTGA	6 cut(s)	160, 391, 475, 538, 1142, 1570
Hpy166II	GTNNAC	5 cut(s)	168, 1102, 1150, 1315, 1579
Hpy188I	TCNGA	6 cut(s)	96, 157, 222, 501, 1465, 1511
Hpy188III	TCNNGA	9 cut(s)	35, 199, 563, 793, 1038, 1295, 1548, 1804, 1862
Hpy8I	GTNNAC	5 cut(s)	168, 1102, 1150, 1315, 1579
Hpy99I	CGWCG	5 cut(s)	161, 235, 394, 445, 1655
HpyAV	CCTTC	5 cut(s)	779, 1534, 1633, 1660, 1693
HpyCH4III	ACNGT	8 cut(s)	28, 205, 799, 1099, 1154, 1260, 1429, 1516
HpyCH4IV	ACGT	5 cut(s)	279, 1162, 1494, 1575, 1695
HpyF10VI	GCNNNNNNNGC	4 cut(s)	323, 337, 418, 761
HpyF3I	CTNAG	5 cut(s)	498, 791, 1007, 1673, 1689
HpySE526I	ACGT	5 cut(s)	279, 1162, 1494, 1575, 1695
Hsp92I	GRCGYC	3 cut(s)	159, 233, 386
Hsp92II	CATG	4 cut(s)	107, 398, 524, 1558
HspAI	GCGC	5 cut(s)	326, 374, 812, 1717, 1877
Kpn2I	TCCGGA	1 cut(s)	198
Kzo9I	GATC	7 cut(s)	91, 172, 1066, 1132, 1473, 1599, 1800
LmnI	GCTCC	6 cut(s)	201, 958, 1645, 1669, 1726, 1884
Lsp1109I	GCAGC	7 cut(s)	180, 315, 352, 432, 1212, 1751, 1886
LweI	GCATC	4 cut(s)	71, 261, 1551, 1630
MaeI	CTAG	5 cut(s)	35, 608, 723, 1106, 1406
MaeII	ACGT	5 cut(s)	279, 1162, 1494, 1575, 1695
MaeIII	GTNAC	3 cut(s)	725, 932, 1204
MalI	GATC	7 cut(s)	93, 174, 1068, 1134, 1475, 1601, 1802
MboI	GATC	7 cut(s)	91, 172, 1066, 1132, 1473, 1599, 1800
MflI	RGATCY	2 cut(s)	91, 1473
MhlI	GDGCHC	4 cut(s)	216, 461, 1581, 1650
MluCI	AATT	6 cut(s)	644, 928, 943, 1114, 1268, 1481
MlyI	GAGTC	1 cut(s)	691
MmeI	TCCRAC	3 cut(s)	180, 451, 1380
MroI	TCCGGA	1 cut(s)	198
MslI	CAYNNNNRTG	1 cut(s)	1559
MspA1I	CMGCKG	2 cut(s)	343, 1742
Mva1269I	GAATGC	2 cut(s)	643, 1280
MvaI	CCWGG	6 cut(s)	242, 266, 290, 776, 1324, 1897
MvnI	CGCG	3 cut(s)	149, 326, 374
MwoI	GCNNNNNNNGC	4 cut(s)	323, 337, 418, 761
NciI	CCSGG	6 cut(s)	89, 143, 275, 540, 1660, 1883
NdeII	GATC	7 cut(s)	91, 172, 1066, 1132, 1473, 1599, 1800
NlaIII	CATG	4 cut(s)	107, 398, 524, 1558
NlaIV	GGNNCC	6 cut(s)	93, 357, 518, 570, 1047, 1513
NmeAIII	GCCGAG	3 cut(s)	156, 235, 442
NmuCI	GTSAC	2 cut(s)	725, 932
NsbI	TGCGCA	1 cut(s)	813
NspV	TTCGAA	1 cut(s)	1479
PceI	AGGCCT	1 cut(s)	1523
PcsI	WCGNNNNNNNCGW	4 cut(s)	153, 183, 1387, 1409
PctI	GAATGC	2 cut(s)	643, 1280
PfeI	GAWTC	5 cut(s)	334, 490, 688, 1352, 1732
PflFI	GACNNNGTC	1 cut(s)	1427
PflMI	CCANNNNNTGG	1 cut(s)	1789
PfoI	TCCNGGA	2 cut(s)	264, 1881
PinAI	ACCGGT	1 cut(s)	299
PleI	GAGTC	1 cut(s)	691
PpsI	GAGTC	1 cut(s)	691
Ppu21I	YACGTR	1 cut(s)	1696
PpuMI	RGGWCCY	1 cut(s)	568
PshAI	GACNNNNGTC	1 cut(s)	236
Psp124BI	GAGCTC	1 cut(s)	216
Psp5II	RGGWCCY	1 cut(s)	568
Psp6I	CCWGG	6 cut(s)	240, 264, 288, 774, 1322, 1895
PspFI	CCCAGC	2 cut(s)	283, 999
PspGI	CCWGG	6 cut(s)	240, 264, 288, 774, 1322, 1895
PspN4I	GGNNCC	6 cut(s)	93, 357, 518, 570, 1047, 1513
PspPPI	RGGWCCY	1 cut(s)	568
PstI	CTGCAG	1 cut(s)	342
PstNI	CAGNNNCTG	2 cut(s)	346, 700
PsuI	RGATCY	2 cut(s)	91, 1473
PsyI	GACNNNGTC	1 cut(s)	1427
PvuII	CAGCTG	1 cut(s)	1742
RsaI	GTAC	5 cut(s)	407, 767, 805, 1165, 1694
RsaNI	GTAC	5 cut(s)	406, 766, 804, 1164, 1693
RseI	CAYNNNNRTG	1 cut(s)	1559
Rsr2I	CGGWCCG	1 cut(s)	1795
RsrII	CGGWCCG	1 cut(s)	1795
SacI	GAGCTC	1 cut(s)	216
Sau3AI	GATC	7 cut(s)	91, 172, 1066, 1132, 1473, 1599, 1800
SchI	GAGTC	1 cut(s)	691
SduI	GDGCHC	4 cut(s)	216, 461, 1581, 1650
SfaNI	GCATC	4 cut(s)	71, 261, 1551, 1630
SfcI	CTRYAG	1 cut(s)	338
SfuI	TTCGAA	1 cut(s)	1479
SinI	GGWCC	5 cut(s)	121, 132, 238, 568, 1795
SmiMI	CAYNNNNRTG	1 cut(s)	1559
SmlI	CTYRAG	2 cut(s)	125, 1295
SmoI	CTYRAG	2 cut(s)	125, 1295
SpeI	ACTAGT	1 cut(s)	722
Sse9I	AATT	6 cut(s)	644, 928, 943, 1114, 1268, 1481
SseBI	AGGCCT	1 cut(s)	1523
SspMI	CTAG	5 cut(s)	35, 608, 723, 1106, 1406
SstI	GAGCTC	1 cut(s)	216
StuI	AGGCCT	1 cut(s)	1523
StyI	CCWWGG	1 cut(s)	594
TaaI	ACNGT	8 cut(s)	28, 205, 799, 1099, 1154, 1260, 1429, 1516
TaiI	ACGT	5 cut(s)	282, 1165, 1497, 1578, 1698
TaqI	TCGA	1 cut(s)	1479
TaqII	GACCGA	1 cut(s)	206
TasI	AATT	6 cut(s)	644, 928, 943, 1114, 1268, 1481
TauI	GCSGC	5 cut(s)	110, 113, 309, 320, 346
TfiI	GAWTC	5 cut(s)	334, 490, 688, 1352, 1732
TscAI	CASTG	4 cut(s)	680, 744, 1056, 1204
TseFI	GTSAC	2 cut(s)	725, 932
TseI	GCWGC	7 cut(s)	193, 328, 340, 445, 1225, 1739, 1874
Tsp45I	GTSAC	2 cut(s)	725, 932
TspDTI	ATGAA	6 cut(s)	633, 798, 817, 893, 1220, 1355
TspGWI	ACGGA	3 cut(s)	21, 1396, 1777
TspRI	CASTG	4 cut(s)	680, 744, 1056, 1204
Tth111I	GACNNNGTC	1 cut(s)	1427
Van91I	CCANNNNNTGG	1 cut(s)	1789
VneI	GTGCAC	1 cut(s)	1577
VpaK11BI	GGWCC	5 cut(s)	121, 132, 238, 568, 1795
XapI	RAATTY	3 cut(s)	644, 943, 1268
XbaI	TCTAGA	1 cut(s)	34
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1081
XspI	CTAG	5 cut(s)	35, 608, 723, 1106, 1406

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.