Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0010462

Physical Location & Seq

Genomic Coordinates Reverse (-)

19417519 .. 19419840

Gene Structure 2322 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G015650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGGACGGAGAAGAAGAGGAAGCCACAGTATCTCTAGACTTCCCTCTCTTCAAACCCAGAGCATCTAAACCCGCCCCGAAACCCGACCCGGATCTGATAGCCCATGCCGCCGCCGAACCGGACCTTGAGAGGTCCACAGACCCGGACGCGAACTCCGACGCCAAGTTCACCGACCTCGGCCTCGCCGACTGGCTGCTCCGGACGGTCGCCGAGCTCGGTCTGAAGAAGCCGACGCCGGGCCGGGACGTGCTGGGCCTGGCCCAGACCGGTAGCGGCAAGACGGCGGCGTTCGCGCTGCCGATCCTGCAGCGGCTGGCGGAGGGGCCGTATGGGGCCCCATGTGGTGATGCCACGCCCGGTAGGGTTAGGGATTTGCTTCAGGAGGACCCTGATTTCCCCTCTGTTTTCTCCAAGGCCAAGGTATTGAATGCTGAATTTGAGGCCGATTTGAGAGTGGTGTTTCGTGCTTGCCGAAGAATCGGCAGGACTCTGTTGTTTTCTGCAACAATGACTAGTGACCTGCAAGCACTGATTGAAGTTTCTGCAAATAAGGCGTACTTTTACCAGGCTTATGAAGGTCTCAGGACGGTTGGTACTCTTGCGCAGAAATATGTTTTCATACCCCGTGAAGCGAAAGAAGTTTATTTGGTGTATATTTTGTCCAAAATGAAAGATATGGGTATTCGTTCAGCCATCGTGTTTGTCTCAACCCTATGGAATTGTCACTTACTGAATTTTTTACTGGAGGAGCTTGGTCAAAGTGTTTCAGCGTTGCACTCATCCAAATCCCAGCCTCTTAGACTTTCTGCATTACATAAGTTCAAATCTGGACAGGTTCCAGTGTTGATTGCAACTGATCTTGCCAATCGTGGTTTGGATATTCCTACGGTTGACCTAGTAATCAATTATGATATTCCAAGTGATCCAAAGGATTATGTTCACCGTGTGGGACGTACTGCAAGAGCAGGCAGAGGAGGTTTAGCTGTTAGCGTTGTTACTCAAATTGAATGCAAGGAGAACGAGGTTCTTGAGGATATTCGTAAGGCGTGTCGCAAGATGAAGATGATGGAATCCAACTTTGTAGAAAGAGAGAAAAAACGGAAAGAACGAACACTAAAGACGCTAGAAGCGAAAGGTTTATTGAAAAAAGGAGTAAGAAGAACAAAAGAGAAAAATCAACCGTTGAATTGGCTCCCGTATAACCTTTCTTCCTTTCGACTCTGCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009553 GO:0009561 GO:0009791 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022613 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042623 GO:0042995 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0090406 GO:0120025 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

409

Amino Acids

45.45

Weight (kDa)

9.02

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	79 - 106	3.9e-07	DEAD/DEAH box helicase
Helicase_C	PF00271	225 - 323	9.4e-27	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16280
fragaria_vesca	FvH4_3g14750 FvH4_3g14750 FvH4_3g14750
malus_domestica	MD10G1209000.v1.1
prunus_persica	Prupe.4G132500_v2.0.a1
pyrus_communis	pycom10g17780 pycom13g14880
rosa_chinensis	RchiOBHm_Chr5g0024261
rosa_laevigata	RLG00000032788
rosa_multiflora	Rmu_sc0002344.1_g000004 Rmu_sc0018255.1_g000002
rosa_roxburghii	Rroxscaffold_1G00054920 Rroxscaffold_1G00055760
rosa_rugosa	Rorug05G0082900
rosa_samantha	Rh5AG173300 Rh5BG170200 Rh5CG186300 Rh5DG172800
rosa_wichuraiana	Rw0G000850 Rw5G015650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	603
Acc36I	ACCTGC	1 cut(s)	528
AccII	CGCG	2 cut(s)	149, 293
AccIII	TCCGGA	1 cut(s)	198
AciI	CCGC	7 cut(s)	72, 108, 111, 273, 284, 310, 317
AclWI	GGATC	3 cut(s)	99, 295, 917
AcsI	RAATTY	2 cut(s)	434, 733
AcuI	CTGAAG	2 cut(s)	242, 362
AcyI	GRCGYC	2 cut(s)	159, 233
AdeI	CACNNNGTG	1 cut(s)	946
AfaI	GTAC	3 cut(s)	557, 595, 955
AfiI	CCNNNNNNNGG	1 cut(s)	236
AgeI	ACCGGT	1 cut(s)	266
AgsI	TTSAA	7 cut(s)	52, 427, 536, 823, 1007, 1144, 1186
AhlI	ACTAGT	1 cut(s)	512
AjiI	CACGTC	1 cut(s)	247
AjnI	CCWGG	2 cut(s)	255, 564
AluBI	AGCT	3 cut(s)	214, 751, 983
AluI	AGCT	3 cut(s)	214, 751, 983
Alw21I	GWGCWC	1 cut(s)	216
Alw26I	GTCTC	2 cut(s)	584, 709
AlwI	GGATC	3 cut(s)	99, 295, 917
AlwNI	CAGNNNCTG	1 cut(s)	313
Aor13HI	TCCGGA	1 cut(s)	198
AoxI	GGCC	8 cut(s)	178, 238, 253, 258, 323, 333, 414, 441
ApaI	GGGCCC	1 cut(s)	337
ApeKI	GCWGC	3 cut(s)	193, 295, 307
ApoI	RAATTY	2 cut(s)	434, 733
AsiGI	ACCGGT	1 cut(s)	266
AspLEI	GCGC	2 cut(s)	295, 604
AspS9I	GGNCC	9 cut(s)	121, 132, 238, 253, 259, 323, 333, 334, 385
AsuC2I	CCSGG	5 cut(s)	89, 143, 237, 242, 357
AsuHPI	GGTGA	3 cut(s)	160, 356, 932
AvaII	GGWCC	3 cut(s)	121, 132, 385
BaeGI	GKGCMC	1 cut(s)	337
BanII	GRGCYC	2 cut(s)	216, 337
Bbv12I	GWGCWC	1 cut(s)	216
BbvI	GCAGC	3 cut(s)	180, 282, 319
BccI	CCATC	2 cut(s)	701, 1060
BceAI	ACGGC	2 cut(s)	297, 310
BciT130I	CCWGG	2 cut(s)	257, 566
BcnI	CCSGG	5 cut(s)	89, 143, 237, 242, 357
BcoDI	GTCTC	2 cut(s)	584, 709
BcuI	ACTAGT	1 cut(s)	512
BfaI	CTAG	4 cut(s)	35, 513, 896, 1124
BfmI	CTRYAG	1 cut(s)	305
BfuAI	ACCTGC	1 cut(s)	528
BisI	GCNGC	8 cut(s)	108, 111, 194, 274, 285, 296, 308, 311
BlsI	GCNGC	8 cut(s)	109, 112, 195, 275, 286, 297, 309, 312
Bme1390I	CCNGG	7 cut(s)	89, 143, 237, 242, 257, 357, 566
Bme18I	GGWCC	3 cut(s)	121, 132, 385
BmgBI	CACGTC	1 cut(s)	247
BmgT120I	GGNCC	9 cut(s)	121, 132, 238, 253, 259, 323, 333, 334, 385
BmiI	GGNNCC	7 cut(s)	324, 334, 335, 336, 387, 837, 1193
BmrFI	CCNGG	7 cut(s)	89, 143, 237, 242, 257, 357, 566
BmsI	GCATC	2 cut(s)	71, 337
BpmI	CTGGAG	1 cut(s)	764
BpuEI	CTTGAG	2 cut(s)	146, 1049
BpuMI	CCSGG	5 cut(s)	89, 143, 237, 242, 357
BsaHI	GRCGYC	2 cut(s)	159, 233
BsaI	GGTCTC	1 cut(s)	584
BsaJI	CCNNGG	3 cut(s)	175, 411, 417
BsaWI	WCCGGW	3 cut(s)	118, 198, 266
BsaXI	ACNNNNNCTCC	4 cut(s)	137, 167, 311, 341
Bsc4I	CCNNNNNNNGG	1 cut(s)	236
Bse118I	RCCGGY	1 cut(s)	266
Bse1I	ACTGG	3 cut(s)	194, 747, 839
BseAI	TCCGGA	1 cut(s)	198
BseBI	CCWGG	2 cut(s)	257, 566
BseDI	CCNNGG	3 cut(s)	175, 411, 417
BseGI	GGATG	1 cut(s)	779
BseLI	CCNNNNNNNGG	1 cut(s)	236
BseMII	CTCAG	1 cut(s)	595
BseNI	ACTGG	3 cut(s)	194, 747, 839
BseRI	GAGGAG	2 cut(s)	761, 987
BseSI	GKGCMC	1 cut(s)	337
BseXI	GCAGC	3 cut(s)	180, 282, 319
BseYI	CCCAGC	2 cut(s)	250, 789
Bsh1236I	CGCG	2 cut(s)	149, 293
Bsh1285I	CGRYCG	1 cut(s)	207
BshFI	GGCC	8 cut(s)	180, 240, 255, 260, 325, 335, 416, 443
BshTI	ACCGGT	1 cut(s)	266
BsiEI	CGRYCG	1 cut(s)	207
BsiHKAI	GWGCWC	1 cut(s)	216
BsiSI	CCGG	8 cut(s)	89, 119, 143, 199, 236, 241, 267, 357
BslFI	GGGAC	2 cut(s)	257, 963
BslI	CCNNNNNNNGG	1 cut(s)	236
BsmAI	GTCTC	2 cut(s)	584, 709
BsmFI	GGGAC	2 cut(s)	257, 963
BsmI	GAATGC	2 cut(s)	433, 1013
BsnI	GGCC	8 cut(s)	180, 240, 255, 260, 325, 335, 416, 443
Bso31I	GGTCTC	1 cut(s)	584
Bsp120I	GGGCCC	1 cut(s)	333
Bsp1286I	GDGCHC	2 cut(s)	216, 337
Bsp13I	TCCGGA	1 cut(s)	198
Bsp143I	GATC	4 cut(s)	91, 300, 856, 922
BspACI	CCGC	7 cut(s)	72, 108, 111, 273, 284, 310, 317
BspANI	GGCC	8 cut(s)	180, 240, 255, 260, 325, 335, 416, 443
BspCNI	CTCAG	1 cut(s)	594
BspEI	TCCGGA	1 cut(s)	198
BspFNI	CGCG	2 cut(s)	149, 293
BspLI	GGNNCC	7 cut(s)	324, 334, 335, 336, 387, 837, 1193
BspMAI	CTGCAG	1 cut(s)	309
BspMI	ACCTGC	1 cut(s)	528
BspPI	GGATC	3 cut(s)	99, 295, 917
BspTNI	GGTCTC	1 cut(s)	584
BsrFI	RCCGGY	1 cut(s)	266
BsrI	ACTGG	3 cut(s)	194, 747, 839
BssAI	RCCGGY	1 cut(s)	266
BssECI	CCNNGG	3 cut(s)	175, 411, 417
BssMI	GATC	4 cut(s)	91, 300, 856, 922
BssNI	GRCGYC	2 cut(s)	159, 233
BssT1I	CCWWGG	2 cut(s)	411, 417
Bst2UI	CCWGG	2 cut(s)	257, 566
Bst4CI	ACNGT	6 cut(s)	28, 205, 589, 889, 944, 1182
Bst6I	CTCTTC	2 cut(s)	9, 53
BstACI	GRCGYC	2 cut(s)	159, 233
BstC8I	GCNNGC	4 cut(s)	315, 469, 525, 967
BstDEI	CTNAG	2 cut(s)	581, 797
BstF5I	GGATG	1 cut(s)	779
BstFNI	CGCG	2 cut(s)	149, 293
BstHHI	GCGC	2 cut(s)	295, 604
BstKTI	GATC	4 cut(s)	94, 303, 859, 925
BstMAI	GTCTC	2 cut(s)	584, 709
BstMBI	GATC	4 cut(s)	91, 300, 856, 922
BstMCI	CGRYCG	1 cut(s)	207
BstMWI	GCNNNNNNNGC	4 cut(s)	107, 290, 304, 551
BstNI	CCWGG	2 cut(s)	257, 566
BstSCI	CCNGG	7 cut(s)	87, 141, 235, 240, 255, 355, 564
BstSFI	CTRYAG	1 cut(s)	305
BstSLI	GKGCMC	1 cut(s)	337
BstUI	CGCG	2 cut(s)	149, 293
BstV1I	GCAGC	3 cut(s)	180, 282, 319
BstX2I	RGATCY	1 cut(s)	91
BstYI	RGATCY	1 cut(s)	91
BsuRI	GGCC	8 cut(s)	180, 240, 255, 260, 325, 335, 416, 443
BtrI	CACGTC	1 cut(s)	247
BtsCI	GGATG	1 cut(s)	779
BtsIMutI	CAGTG	2 cut(s)	527, 846
BveI	ACCTGC	1 cut(s)	528
Cac8I	GCNNGC	4 cut(s)	315, 469, 525, 967
CaiI	CAGNNNCTG	1 cut(s)	313
CfoI	GCGC	2 cut(s)	295, 604
Cfr10I	RCCGGY	1 cut(s)	266
Cfr13I	GGNCC	9 cut(s)	121, 132, 238, 253, 259, 323, 333, 334, 385
CseI	GACGC	4 cut(s)	155, 167, 241, 1129
Csp6I	GTAC	3 cut(s)	556, 594, 954
CspAI	ACCGGT	1 cut(s)	266
CviAII	CATG	2 cut(s)	104, 339
CviQI	GTAC	3 cut(s)	556, 594, 954
DdeI	CTNAG	2 cut(s)	581, 797
DpnI	GATC	4 cut(s)	93, 302, 858, 924
DpnII	GATC	4 cut(s)	91, 300, 856, 922
DraIII	CACNNNGTG	1 cut(s)	946
Eam1104I	CTCTTC	2 cut(s)	9, 53
EarI	CTCTTC	2 cut(s)	9, 53
EciI	GGCGGA	1 cut(s)	332
Ecl136II	GAGCTC	1 cut(s)	214
Eco130I	CCWWGG	2 cut(s)	411, 417
Eco24I	GRGCYC	2 cut(s)	216, 337
Eco31I	GGTCTC	1 cut(s)	584
Eco47I	GGWCC	3 cut(s)	121, 132, 385
Eco53kI	GAGCTC	1 cut(s)	214
Eco57I	CTGAAG	2 cut(s)	242, 362
EcoICRI	GAGCTC	1 cut(s)	214
EcoO109I	RGGNCCY	3 cut(s)	333, 334, 385
EcoRII	CCWGG	2 cut(s)	255, 564
EcoT14I	CCWWGG	2 cut(s)	411, 417
EcoT38I	GRGCYC	2 cut(s)	216, 337
ErhI	CCWWGG	2 cut(s)	411, 417
FaeI	CATG	2 cut(s)	107, 342
FalI	AAGNNNNNCTT	2 cut(s)	542, 574
FaqI	GGGAC	2 cut(s)	257, 963
FatI	CATG	2 cut(s)	103, 338
FauI	CCCGC	1 cut(s)	79
FauNDI	CATATG	1 cut(s)	1226
Fnu4HI	GCNGC	8 cut(s)	108, 111, 194, 274, 285, 296, 308, 311
FokI	GGATG	1 cut(s)	766
FriOI	GRGCYC	2 cut(s)	216, 337
Fsp4HI	GCNGC	8 cut(s)	108, 111, 194, 274, 285, 296, 308, 311
FspBI	CTAG	4 cut(s)	35, 513, 896, 1124
FspI	TGCGCA	1 cut(s)	603
GlaI	GCGC	2 cut(s)	294, 603
GluI	GCNGC	8 cut(s)	108, 111, 194, 274, 285, 296, 308, 311
GsaI	CCCAGC	2 cut(s)	254, 793
GsuI	CTGGAG	1 cut(s)	764
HaeIII	GGCC	8 cut(s)	180, 240, 255, 260, 325, 335, 416, 443
HapII	CCGG	8 cut(s)	89, 119, 143, 199, 236, 241, 267, 357
HgaI	GACGC	4 cut(s)	155, 167, 241, 1129
HhaI	GCGC	2 cut(s)	295, 604
Hin1I	GRCGYC	2 cut(s)	159, 233
Hin1II	CATG	2 cut(s)	107, 342
Hin6I	GCGC	2 cut(s)	293, 602
HinP1I	GCGC	2 cut(s)	293, 602
HincII	GTYRAC	1 cut(s)	892
HindII	GTYRAC	1 cut(s)	892
HinfI	GANTC	4 cut(s)	477, 487, 1070, 1218
HpaII	CCGG	8 cut(s)	89, 119, 143, 199, 236, 241, 267, 357
HphI	GGTGA	3 cut(s)	160, 356, 932
Hpy166II	GTNNAC	4 cut(s)	135, 168, 892, 940
Hpy188I	TCNGA	3 cut(s)	96, 157, 222
Hpy188III	TCNNGA	6 cut(s)	35, 199, 380, 583, 828, 1028
Hpy8I	GTNNAC	4 cut(s)	135, 168, 892, 940
Hpy99I	CGWCG	2 cut(s)	161, 235
HpyAV	CCTTC	1 cut(s)	569
HpyCH4III	ACNGT	6 cut(s)	28, 205, 589, 889, 944, 1182
HpyCH4IV	ACGT	2 cut(s)	246, 952
HpyF10VI	GCNNNNNNNGC	4 cut(s)	107, 290, 304, 551
HpyF3I	CTNAG	2 cut(s)	581, 797
HpySE526I	ACGT	2 cut(s)	246, 952
Hsp92I	GRCGYC	2 cut(s)	159, 233
Hsp92II	CATG	2 cut(s)	107, 342
HspAI	GCGC	2 cut(s)	293, 602
Kpn2I	TCCGGA	1 cut(s)	198
Kzo9I	GATC	4 cut(s)	91, 300, 856, 922
LmnI	GCTCC	3 cut(s)	201, 748, 1197
Lsp1109I	GCAGC	3 cut(s)	180, 282, 319
LweI	GCATC	2 cut(s)	71, 337
MaeI	CTAG	4 cut(s)	35, 513, 896, 1124
MaeII	ACGT	2 cut(s)	246, 952
MaeIII	GTNAC	3 cut(s)	515, 722, 994
MalI	GATC	4 cut(s)	93, 302, 858, 924
MboI	GATC	4 cut(s)	91, 300, 856, 922
MboII	GAAGA	8 cut(s)	23, 26, 40, 235, 486, 1072, 1170, 1200
MflI	RGATCY	1 cut(s)	91
MhlI	GDGCHC	2 cut(s)	216, 337
MluCI	AATT	6 cut(s)	434, 718, 733, 904, 1002, 1186
MlyI	GAGTC	2 cut(s)	481, 1212
MmeI	TCCRAC	2 cut(s)	180, 1098
MroI	TCCGGA	1 cut(s)	198
MspA1I	CMGCKG	1 cut(s)	310
MspI	CCGG	8 cut(s)	89, 119, 143, 199, 236, 241, 267, 357
MspR9I	CCNGG	7 cut(s)	89, 143, 237, 242, 257, 357, 566
Mva1269I	GAATGC	2 cut(s)	433, 1013
MvaI	CCWGG	2 cut(s)	257, 566
MvnI	CGCG	2 cut(s)	149, 293
MwoI	GCNNNNNNNGC	4 cut(s)	107, 290, 304, 551
NciI	CCSGG	5 cut(s)	89, 143, 237, 242, 357
NdeI	CATATG	1 cut(s)	1226
NdeII	GATC	4 cut(s)	91, 300, 856, 922
NlaIII	CATG	2 cut(s)	107, 342
NlaIV	GGNNCC	7 cut(s)	324, 334, 335, 336, 387, 837, 1193
NmeAIII	GCCGAG	2 cut(s)	156, 235
NmuCI	GTSAC	2 cut(s)	515, 722
NsbI	TGCGCA	1 cut(s)	603
PcsI	WCGNNNNNNNCGW	5 cut(s)	153, 183, 469, 1105, 1127
PctI	GAATGC	2 cut(s)	433, 1013
PfeI	GAWTC	2 cut(s)	477, 1070
PinAI	ACCGGT	1 cut(s)	266
PkrI	GCNGC	8 cut(s)	109, 112, 195, 275, 286, 297, 309, 312
PleI	GAGTC	2 cut(s)	481, 1212
PpsI	GAGTC	2 cut(s)	481, 1212
PpuMI	RGGWCCY	1 cut(s)	385
Psp124BI	GAGCTC	1 cut(s)	216
Psp5II	RGGWCCY	1 cut(s)	385
Psp6I	CCWGG	2 cut(s)	255, 564
PspFI	CCCAGC	2 cut(s)	250, 789
PspGI	CCWGG	2 cut(s)	255, 564
PspN4I	GGNNCC	7 cut(s)	324, 334, 335, 336, 387, 837, 1193
PspOMI	GGGCCC	1 cut(s)	333
PspPI	GGNCC	9 cut(s)	121, 132, 238, 253, 259, 323, 333, 334, 385
PspPPI	RGGWCCY	1 cut(s)	385
PstI	CTGCAG	1 cut(s)	309
PstNI	CAGNNNCTG	1 cut(s)	313
PsuI	RGATCY	1 cut(s)	91
RsaI	GTAC	3 cut(s)	557, 595, 955
RsaNI	GTAC	3 cut(s)	556, 594, 954
SacI	GAGCTC	1 cut(s)	216
SatI	GCNGC	8 cut(s)	108, 111, 194, 274, 285, 296, 308, 311
Sau3AI	GATC	4 cut(s)	91, 300, 856, 922
Sau96I	GGNCC	9 cut(s)	121, 132, 238, 253, 259, 323, 333, 334, 385
SchI	GAGTC	2 cut(s)	481, 1212
ScrFI	CCNGG	7 cut(s)	89, 143, 237, 242, 257, 357, 566
SduI	GDGCHC	2 cut(s)	216, 337
SfaNI	GCATC	2 cut(s)	71, 337
SfcI	CTRYAG	1 cut(s)	305
SinI	GGWCC	3 cut(s)	121, 132, 385
SmlI	CTYRAG	2 cut(s)	125, 1028
SmoI	CTYRAG	2 cut(s)	125, 1028
SpeI	ACTAGT	1 cut(s)	512
Sse9I	AATT	6 cut(s)	434, 718, 733, 904, 1002, 1186
SsiI	CCGC	7 cut(s)	72, 108, 111, 273, 284, 310, 317
SspMI	CTAG	4 cut(s)	35, 513, 896, 1124
SstI	GAGCTC	1 cut(s)	216
StyD4I	CCNGG	7 cut(s)	87, 141, 235, 240, 255, 355, 564
StyI	CCWWGG	2 cut(s)	411, 417
TaaI	ACNGT	6 cut(s)	28, 205, 589, 889, 944, 1182
TaiI	ACGT	2 cut(s)	249, 955
TaqI	TCGA	1 cut(s)	1216
TaqII	GACCGA	1 cut(s)	206
TasI	AATT	6 cut(s)	434, 718, 733, 904, 1002, 1186
TauI	GCSGC	5 cut(s)	110, 113, 276, 287, 313
TfiI	GAWTC	2 cut(s)	477, 1070
TscAI	CASTG	2 cut(s)	534, 846
TseFI	GTSAC	2 cut(s)	515, 722
TseI	GCWGC	3 cut(s)	193, 295, 307
Tsp45I	GTSAC	2 cut(s)	515, 722
TspDTI	ATGAA	4 cut(s)	588, 607, 683, 1073
TspGWI	ACGGA	2 cut(s)	21, 1114
TspRI	CASTG	2 cut(s)	534, 846
VpaK11BI	GGWCC	3 cut(s)	121, 132, 385
XapI	RAATTY	2 cut(s)	434, 733
XbaI	TCTAGA	1 cut(s)	34
XcmI	CCANNNNNNNNNTGG	1 cut(s)	871
XspI	CTAG	4 cut(s)	35, 513, 896, 1124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.