f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g19290 FvH4_2g19380 FvH4_2g19460 FvH4_2g19490 |
| rosa_chinensis | RchiOBHm_Chr5g0035781 |
| rosa_laevigata | RLG00000012665 |
| rosa_multiflora | Rmu_sc0002535.1_g000005 Rmu_sc0002535.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00183490 Rroxscaffold_7G00183510 Rroxscaffold_7G00183580 |
| rosa_samantha | Rh6BG283900 Rh6BG284100 |
| rosa_wichuraiana | Rw6G024330 Rw6G024360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 770 |
| AarI | CACCTGC | 1 cut(s) | 1324 |
| Acc36I | ACCTGC | 1 cut(s) | 1324 |
| AccB1I | GGYRCC | 1 cut(s) | 114 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1358 |
| AccI | GTMKAC | 2 cut(s) | 278, 1156 |
| AccII | CGCG | 3 cut(s) | 309, 924, 926 |
| AccIII | TCCGGA | 1 cut(s) | 685 |
| AciI | CCGC | 1 cut(s) | 1235 |
| AclI | AACGTT | 2 cut(s) | 9, 138 |
| AclWI | GGATC | 4 cut(s) | 29, 665, 1343, 1408 |
| AcoI | YGGCCR | 2 cut(s) | 478, 492 |
| AcsI | RAATTY | 4 cut(s) | 73, 972, 1142, 1162 |
| AfaI | GTAC | 1 cut(s) | 124 |
| AfeI | AGCGCT | 1 cut(s) | 296 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 344, 1358, 1389 |
| AhlI | ACTAGT | 1 cut(s) | 125 |
| AjiI | CACGTC | 1 cut(s) | 314 |
| AjnI | CCWGG | 2 cut(s) | 343, 1357 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 168, 200, 879, 911 |
| AluBI | AGCT | 4 cut(s) | 647, 730, 1017, 1024 |
| AluI | AGCT | 4 cut(s) | 647, 730, 1017, 1024 |
| Alw26I | GTCTC | 2 cut(s) | 945, 994 |
| AlwI | GGATC | 4 cut(s) | 29, 665, 1343, 1408 |
| Ama87I | CYCGRG | 1 cut(s) | 282 |
| Aor13HI | TCCGGA | 1 cut(s) | 685 |
| Aor51HI | AGCGCT | 1 cut(s) | 296 |
| AoxI | GGCC | 4 cut(s) | 144, 441, 478, 492 |
| ApeKI | GCWGC | 3 cut(s) | 98, 236, 378 |
| ApoI | RAATTY | 4 cut(s) | 73, 972, 1142, 1162 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1016 |
| AspLEI | GCGC | 4 cut(s) | 297, 311, 926, 1308 |
| AspS9I | GGNCC | 2 cut(s) | 722, 1380 |
| AsuHPI | GGTGA | 3 cut(s) | 1018, 1121, 1305 |
| AvaI | CYCGRG | 1 cut(s) | 282 |
| AvaII | GGWCC | 2 cut(s) | 722, 1380 |
| BaeGI | GKGCMC | 1 cut(s) | 119 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 239, 272 |
| BalI | TGGCCA | 1 cut(s) | 494 |
| BanI | GGYRCC | 1 cut(s) | 114 |
| BbsI | GAAGAC | 2 cut(s) | 1095, 1443 |
| BbvI | GCAGC | 3 cut(s) | 110, 223, 390 |
| BccI | CCATC | 3 cut(s) | 51, 509, 600 |
| BciT130I | CCWGG | 2 cut(s) | 345, 1359 |
| BciVI | GTATCC | 1 cut(s) | 359 |
| BclI | TGATCA | 1 cut(s) | 622 |
| BcoDI | GTCTC | 2 cut(s) | 945, 994 |
| BcuI | ACTAGT | 1 cut(s) | 125 |
| BfaI | CTAG | 5 cut(s) | 120, 126, 359, 435, 704 |
| BfmI | CTRYAG | 2 cut(s) | 400, 1317 |
| BfoI | RGCGCY | 2 cut(s) | 298, 1309 |
| BfuAI | ACCTGC | 1 cut(s) | 1324 |
| BfuI | GTATCC | 1 cut(s) | 359 |
| BisI | GCNGC | 4 cut(s) | 99, 237, 379, 1235 |
| BlsI | GCNGC | 4 cut(s) | 100, 238, 380, 1236 |
| BmcAI | AGTACT | 1 cut(s) | 124 |
| Bme1390I | CCNGG | 2 cut(s) | 345, 1359 |
| Bme18I | GGWCC | 2 cut(s) | 722, 1380 |
| BmeT110I | CYCGRG | 1 cut(s) | 282 |
| BmgBI | CACGTC | 1 cut(s) | 314 |
| BmgT120I | GGNCC | 2 cut(s) | 722, 1380 |
| BmiI | GGNNCC | 4 cut(s) | 116, 475, 638, 724 |
| BmrFI | CCNGG | 2 cut(s) | 345, 1359 |
| BmsI | GCATC | 2 cut(s) | 787, 1269 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1067 |
| BpiI | GAAGAC | 2 cut(s) | 1095, 1443 |
| BpuEI | CTTGAG | 1 cut(s) | 372 |
| BsaBI | GATNNNNATC | 1 cut(s) | 519 |
| BsaI | GGTCTC | 1 cut(s) | 945 |
| BsaJI | CCNNGG | 3 cut(s) | 343, 481, 945 |
| BsaWI | WCCGGW | 1 cut(s) | 685 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 344, 1358, 1389 |
| Bse118I | RCCGGY | 2 cut(s) | 443, 837 |
| Bse1I | ACTGG | 2 cut(s) | 38, 1469 |
| Bse8I | GATNNNNATC | 1 cut(s) | 519 |
| BseAI | TCCGGA | 1 cut(s) | 685 |
| BseBI | CCWGG | 2 cut(s) | 345, 1359 |
| BseDI | CCNNGG | 3 cut(s) | 343, 481, 945 |
| BseGI | GGATG | 6 cut(s) | 62, 592, 694, 851, 1052, 1157 |
| BseJI | GATNNNNATC | 1 cut(s) | 519 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 344, 1358, 1389 |
| BseMII | CTCAG | 2 cut(s) | 162, 1079 |
| BseNI | ACTGG | 2 cut(s) | 38, 1469 |
| BseRI | GAGGAG | 1 cut(s) | 327 |
| BseSI | GKGCMC | 1 cut(s) | 119 |
| BseXI | GCAGC | 3 cut(s) | 110, 223, 390 |
| BseYI | CCCAGC | 1 cut(s) | 726 |
| BsgI | GTGCAG | 1 cut(s) | 397 |
| Bsh1236I | CGCG | 3 cut(s) | 309, 924, 926 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1160 |
| BshFI | GGCC | 4 cut(s) | 146, 443, 480, 494 |
| BshNI | GGYRCC | 1 cut(s) | 114 |
| BsiEI | CGRYCG | 1 cut(s) | 1160 |
| BsiHKCI | CYCGRG | 1 cut(s) | 282 |
| BsiSI | CCGG | 4 cut(s) | 444, 477, 686, 838 |
| BslFI | GGGAC | 3 cut(s) | 299, 584, 708 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 344, 1358, 1389 |
| BsmAI | GTCTC | 2 cut(s) | 945, 994 |
| BsmBI | CGTCTC | 1 cut(s) | 994 |
| BsmFI | GGGAC | 3 cut(s) | 299, 584, 708 |
| BsmI | GAATGC | 1 cut(s) | 707 |
| BsnI | GGCC | 4 cut(s) | 146, 443, 480, 494 |
| Bso31I | GGTCTC | 1 cut(s) | 945 |
| BsoBI | CYCGRG | 1 cut(s) | 282 |
| Bsp1286I | GDGCHC | 1 cut(s) | 119 |
| Bsp13I | TCCGGA | 1 cut(s) | 685 |
| Bsp143I | GATC | 5 cut(s) | 34, 622, 670, 1348, 1400 |
| BspACI | CCGC | 1 cut(s) | 1235 |
| BspANI | GGCC | 4 cut(s) | 146, 443, 480, 494 |
| BspCNI | CTCAG | 2 cut(s) | 161, 1078 |
| BspEI | TCCGGA | 1 cut(s) | 685 |
| BspFNI | CGCG | 3 cut(s) | 309, 924, 926 |
| BspHI | TCATGA | 1 cut(s) | 511 |
| BspLI | GGNNCC | 4 cut(s) | 116, 475, 638, 724 |
| BspMAI | CTGCAG | 1 cut(s) | 1321 |
| BspMI | ACCTGC | 1 cut(s) | 1324 |
| BspPI | GGATC | 4 cut(s) | 29, 665, 1343, 1408 |
| BspT107I | GGYRCC | 1 cut(s) | 114 |
| BspTNI | GGTCTC | 1 cut(s) | 945 |
| BsrFI | RCCGGY | 2 cut(s) | 443, 837 |
| BsrI | ACTGG | 2 cut(s) | 38, 1469 |
| BssAI | RCCGGY | 2 cut(s) | 443, 837 |
| BssECI | CCNNGG | 3 cut(s) | 343, 481, 945 |
| BssMI | GATC | 5 cut(s) | 34, 622, 670, 1348, 1400 |
| BssNAI | GTATAC | 1 cut(s) | 279 |
| BssT1I | CCWWGG | 1 cut(s) | 945 |
| Bst1107I | GTATAC | 1 cut(s) | 279 |
| Bst2UI | CCWGG | 2 cut(s) | 345, 1359 |
| Bst4CI | ACNGT | 5 cut(s) | 375, 485, 1060, 1344, 1426 |
| Bst6I | CTCTTC | 2 cut(s) | 560, 772 |
| BstC8I | GCNNGC | 1 cut(s) | 732 |
| BstDEI | CTNAG | 5 cut(s) | 148, 584, 890, 1065, 1469 |
| BstDSI | CCRYGG | 1 cut(s) | 481 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 342 |
| BstF5I | GGATG | 6 cut(s) | 62, 592, 694, 851, 1052, 1157 |
| BstFNI | CGCG | 3 cut(s) | 309, 924, 926 |
| BstH2I | RGCGCY | 2 cut(s) | 298, 1309 |
| BstHHI | GCGC | 4 cut(s) | 297, 311, 926, 1308 |
| BstKTI | GATC | 5 cut(s) | 37, 625, 673, 1351, 1403 |
| BstMAI | GTCTC | 2 cut(s) | 945, 994 |
| BstMBI | GATC | 5 cut(s) | 34, 622, 670, 1348, 1400 |
| BstMCI | CGRYCG | 1 cut(s) | 1160 |
| BstNI | CCWGG | 2 cut(s) | 345, 1359 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1067 |
| BstSCI | CCNGG | 2 cut(s) | 343, 1357 |
| BstSFI | CTRYAG | 2 cut(s) | 400, 1317 |
| BstSLI | GKGCMC | 1 cut(s) | 119 |
| BstUI | CGCG | 3 cut(s) | 309, 924, 926 |
| BstV1I | GCAGC | 3 cut(s) | 110, 223, 390 |
| BstV2I | GAAGAC | 2 cut(s) | 1095, 1443 |
| BstX2I | RGATCY | 1 cut(s) | 34 |
| BstYI | RGATCY | 1 cut(s) | 34 |
| BstZ17I | GTATAC | 1 cut(s) | 279 |
| BsuI | GTATCC | 1 cut(s) | 359 |
| BsuRI | GGCC | 4 cut(s) | 146, 443, 480, 494 |
| BtgI | CCRYGG | 1 cut(s) | 481 |
| BtgZI | GCGATG | 1 cut(s) | 290 |
| BtrI | CACGTC | 1 cut(s) | 314 |
| BtsCI | GGATG | 6 cut(s) | 62, 592, 694, 851, 1052, 1157 |
| BtsIMutI | CAGTG | 3 cut(s) | 371, 1065, 1462 |
| BveI | ACCTGC | 1 cut(s) | 1324 |
| Cac8I | GCNNGC | 1 cut(s) | 732 |
| CciI | TCATGA | 1 cut(s) | 511 |
| CfoI | GCGC | 4 cut(s) | 297, 311, 926, 1308 |
| Cfr10I | RCCGGY | 2 cut(s) | 443, 837 |
| Cfr13I | GGNCC | 2 cut(s) | 722, 1380 |
| Csp6I | GTAC | 1 cut(s) | 123 |
| CviAII | CATG | 5 cut(s) | 322, 512, 786, 842, 884 |
| CviQI | GTAC | 1 cut(s) | 123 |
| DdeI | CTNAG | 5 cut(s) | 148, 584, 890, 1065, 1469 |
| DpnI | GATC | 5 cut(s) | 36, 624, 672, 1350, 1402 |
| DpnII | GATC | 5 cut(s) | 34, 622, 670, 1348, 1400 |
| EaeI | YGGCCR | 2 cut(s) | 478, 492 |
| Eam1104I | CTCTTC | 2 cut(s) | 560, 772 |
| EarI | CTCTTC | 2 cut(s) | 560, 772 |
| Eco130I | CCWWGG | 1 cut(s) | 945 |
| Eco31I | GGTCTC | 1 cut(s) | 945 |
| Eco47I | GGWCC | 2 cut(s) | 722, 1380 |
| Eco47III | AGCGCT | 1 cut(s) | 296 |
| Eco88I | CYCGRG | 1 cut(s) | 282 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 342 |
| EcoO109I | RGGNCCY | 1 cut(s) | 722 |
| EcoRI | GAATTC | 1 cut(s) | 1162 |
| EcoRII | CCWGG | 2 cut(s) | 343, 1357 |
| EcoT14I | CCWWGG | 1 cut(s) | 945 |
| ErhI | CCWWGG | 1 cut(s) | 945 |
| Esp3I | CGTCTC | 1 cut(s) | 994 |
| FaeI | CATG | 5 cut(s) | 325, 515, 789, 845, 887 |
| FaqI | GGGAC | 3 cut(s) | 299, 584, 708 |
| FatI | CATG | 5 cut(s) | 321, 511, 785, 841, 883 |
| FbaI | TGATCA | 1 cut(s) | 622 |
| FblI | GTMKAC | 2 cut(s) | 278, 1156 |
| Fnu4HI | GCNGC | 4 cut(s) | 99, 237, 379, 1235 |
| FokI | GGATG | 6 cut(s) | 69, 579, 701, 858, 1039, 1164 |
| Fsp4HI | GCNGC | 4 cut(s) | 99, 237, 379, 1235 |
| FspBI | CTAG | 5 cut(s) | 120, 126, 359, 435, 704 |
| GlaI | GCGC | 4 cut(s) | 296, 310, 925, 1307 |
| GluI | GCNGC | 4 cut(s) | 99, 237, 379, 1235 |
| GsaI | CCCAGC | 1 cut(s) | 730 |
| HaeII | RGCGCY | 2 cut(s) | 298, 1309 |
| HaeIII | GGCC | 4 cut(s) | 146, 443, 480, 494 |
| HapII | CCGG | 4 cut(s) | 444, 477, 686, 838 |
| HhaI | GCGC | 4 cut(s) | 297, 311, 926, 1308 |
| Hin1II | CATG | 5 cut(s) | 325, 515, 789, 845, 887 |
| Hin6I | GCGC | 4 cut(s) | 295, 309, 924, 1306 |
| HinP1I | GCGC | 4 cut(s) | 295, 309, 924, 1306 |
| HincII | GTYRAC | 2 cut(s) | 1157, 1419 |
| HindII | GTYRAC | 2 cut(s) | 1157, 1419 |
| HindIII | AAGCTT | 2 cut(s) | 1015, 1022 |
| HpaII | CCGG | 4 cut(s) | 444, 477, 686, 838 |
| HphI | GGTGA | 3 cut(s) | 1018, 1121, 1305 |
| Hpy166II | GTNNAC | 5 cut(s) | 279, 792, 1157, 1380, 1419 |
| Hpy188I | TCNGA | 8 cut(s) | 19, 34, 532, 538, 651, 670, 985, 1481 |
| Hpy188III | TCNNGA | 4 cut(s) | 197, 284, 512, 686 |
| Hpy8I | GTNNAC | 5 cut(s) | 279, 792, 1157, 1380, 1419 |
| HpyAV | CCTTC | 2 cut(s) | 646, 1128 |
| HpyCH4III | ACNGT | 5 cut(s) | 375, 485, 1060, 1344, 1426 |
| HpyCH4IV | ACGT | 6 cut(s) | 9, 138, 166, 313, 619, 817 |
| HpyCH4V | TGCA | 5 cut(s) | 71, 246, 378, 827, 1319 |
| HpyF3I | CTNAG | 5 cut(s) | 148, 584, 890, 1065, 1469 |
| HpySE526I | ACGT | 6 cut(s) | 9, 138, 166, 313, 619, 817 |
| Hsp92II | CATG | 5 cut(s) | 325, 515, 789, 845, 887 |
| HspAI | GCGC | 4 cut(s) | 295, 309, 924, 1306 |
| Kpn2I | TCCGGA | 1 cut(s) | 685 |
| Ksp22I | TGATCA | 1 cut(s) | 622 |
| Kzo9I | GATC | 5 cut(s) | 34, 622, 670, 1348, 1400 |
| LmnI | GCTCC | 3 cut(s) | 479, 642, 652 |
| Lsp1109I | GCAGC | 3 cut(s) | 110, 223, 390 |
| LweI | GCATC | 2 cut(s) | 787, 1269 |
| MaeI | CTAG | 5 cut(s) | 120, 126, 359, 435, 704 |
| MaeII | ACGT | 6 cut(s) | 9, 138, 166, 313, 619, 817 |
| MaeIII | GTNAC | 5 cut(s) | 414, 1006, 1060, 1075, 1109 |
| MalI | GATC | 5 cut(s) | 36, 624, 672, 1350, 1402 |
| MboI | GATC | 5 cut(s) | 34, 622, 670, 1348, 1400 |
| MboII | GAAGA | 9 cut(s) | 6, 188, 378, 547, 789, 881, 1100, 1448, 1456 |
| MfeI | CAATTG | 1 cut(s) | 828 |
| MflI | RGATCY | 1 cut(s) | 34 |
| MhlI | GDGCHC | 1 cut(s) | 119 |
| MlsI | TGGCCA | 1 cut(s) | 494 |
| MluNI | TGGCCA | 1 cut(s) | 494 |
| MlyI | GAGTC | 2 cut(s) | 757, 1057 |
| MmeI | TCCRAC | 2 cut(s) | 1014, 1020 |
| Mox20I | TGGCCA | 1 cut(s) | 494 |
| MroI | TCCGGA | 1 cut(s) | 685 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1016 |
| MscI | TGGCCA | 1 cut(s) | 494 |
| MseI | TTAA | 7 cut(s) | 609, 630, 966, 1230, 1266, 1364, 1458 |
| Msp20I | TGGCCA | 1 cut(s) | 494 |
| MspI | CCGG | 4 cut(s) | 444, 477, 686, 838 |
| MspR9I | CCNGG | 2 cut(s) | 345, 1359 |
| MunI | CAATTG | 1 cut(s) | 828 |
| Mva1269I | GAATGC | 1 cut(s) | 707 |
| MvaI | CCWGG | 2 cut(s) | 345, 1359 |
| MvnI | CGCG | 3 cut(s) | 309, 924, 926 |
| NdeII | GATC | 5 cut(s) | 34, 622, 670, 1348, 1400 |
| NlaIII | CATG | 5 cut(s) | 325, 515, 789, 845, 887 |
| NlaIV | GGNNCC | 4 cut(s) | 116, 475, 638, 724 |
| NmuCI | GTSAC | 4 cut(s) | 1006, 1060, 1075, 1109 |
| PagI | TCATGA | 1 cut(s) | 511 |
| PaqCI | CACCTGC | 1 cut(s) | 1324 |
| PctI | GAATGC | 1 cut(s) | 707 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1016 |
| PfeI | GAWTC | 9 cut(s) | 20, 79, 89, 193, 212, 533, 682, 914, 938 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1358 |
| PkrI | GCNGC | 4 cut(s) | 100, 238, 380, 1236 |
| PleI | GAGTC | 2 cut(s) | 757, 1057 |
| PpsI | GAGTC | 2 cut(s) | 757, 1057 |
| PpuMI | RGGWCCY | 1 cut(s) | 722 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1067 |
| PsiI | TTATAA | 1 cut(s) | 770 |
| Psp1406I | AACGTT | 2 cut(s) | 9, 138 |
| Psp5II | RGGWCCY | 1 cut(s) | 722 |
| Psp6I | CCWGG | 2 cut(s) | 343, 1357 |
| PspFI | CCCAGC | 1 cut(s) | 726 |
| PspGI | CCWGG | 2 cut(s) | 343, 1357 |
| PspN4I | GGNNCC | 4 cut(s) | 116, 475, 638, 724 |
| PspPI | GGNCC | 2 cut(s) | 722, 1380 |
| PspPPI | RGGWCCY | 1 cut(s) | 722 |
| PstI | CTGCAG | 1 cut(s) | 1321 |
| PsuI | RGATCY | 1 cut(s) | 34 |
| RsaI | GTAC | 1 cut(s) | 124 |
| RsaNI | GTAC | 1 cut(s) | 123 |
| SalI | GTCGAC | 1 cut(s) | 1155 |
| SaqAI | TTAA | 7 cut(s) | 609, 630, 966, 1230, 1266, 1364, 1458 |
| SatI | GCNGC | 4 cut(s) | 99, 237, 379, 1235 |
| Sau3AI | GATC | 5 cut(s) | 34, 622, 670, 1348, 1400 |
| Sau96I | GGNCC | 2 cut(s) | 722, 1380 |
| ScaI | AGTACT | 1 cut(s) | 124 |
| SchI | GAGTC | 2 cut(s) | 757, 1057 |
| ScrFI | CCNGG | 2 cut(s) | 345, 1359 |
| SduI | GDGCHC | 1 cut(s) | 119 |
| SfaNI | GCATC | 2 cut(s) | 787, 1269 |
| SfcI | CTRYAG | 2 cut(s) | 400, 1317 |
| SinI | GGWCC | 2 cut(s) | 722, 1380 |
| SmlI | CTYRAG | 1 cut(s) | 387 |
| SmoI | CTYRAG | 1 cut(s) | 387 |
| SpeI | ACTAGT | 1 cut(s) | 125 |
| SsiI | CCGC | 1 cut(s) | 1235 |
| SspI | AATATT | 2 cut(s) | 409, 1195 |
| SspMI | CTAG | 5 cut(s) | 120, 126, 359, 435, 704 |
| StyD4I | CCNGG | 2 cut(s) | 343, 1357 |
| StyI | CCWWGG | 1 cut(s) | 945 |
| TaaI | ACNGT | 5 cut(s) | 375, 485, 1060, 1344, 1426 |
| TaiI | ACGT | 6 cut(s) | 12, 141, 169, 316, 622, 820 |
| TaqI | TCGA | 6 cut(s) | 449, 568, 615, 861, 1071, 1156 |
| TaqII | GACCGA | 1 cut(s) | 1174 |
| TatI | WGTACW | 1 cut(s) | 122 |
| TauI | GCSGC | 1 cut(s) | 1237 |
| TfiI | GAWTC | 9 cut(s) | 20, 79, 89, 193, 212, 533, 682, 914, 938 |
| Tru1I | TTAA | 7 cut(s) | 609, 630, 966, 1230, 1266, 1364, 1458 |
| Tru9I | TTAA | 7 cut(s) | 609, 630, 966, 1230, 1266, 1364, 1458 |
| TscAI | CASTG | 3 cut(s) | 378, 1065, 1469 |
| TseFI | GTSAC | 4 cut(s) | 1006, 1060, 1075, 1109 |
| TseI | GCWGC | 3 cut(s) | 98, 236, 378 |
| Tsp45I | GTSAC | 4 cut(s) | 1006, 1060, 1075, 1109 |
| TspDTI | ATGAA | 3 cut(s) | 900, 921, 1205 |
| TspGWI | ACGGA | 1 cut(s) | 69 |
| TspRI | CASTG | 3 cut(s) | 378, 1065, 1469 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1358 |
| VpaK11BI | GGWCC | 2 cut(s) | 722, 1380 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 342 |
| XapI | RAATTY | 4 cut(s) | 73, 972, 1142, 1162 |
| XmiI | GTMKAC | 2 cut(s) | 278, 1156 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1016 |
| XspI | CTAG | 5 cut(s) | 120, 126, 359, 435, 704 |
| ZrmI | AGTACT | 1 cut(s) | 124 |