Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002699.1

Orthogroup ID

OG0017477

Physical Location & Seq

Genomic Coordinates Reverse (-)

125852 .. 128877

Gene Structure 3026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002699.1_g000030.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2637 bp

atgctctcgagatcttgctttgatttgctgaatttggaccccattgacgatttccgggccgtcagtcggatccccagagtcatgcaagcctccggcttcatctccgagttcgacaacaactccgacgaccgttccggcggctcatcctcatcctcatccgacaacaacaacaacgttgtttccactgtttcgcaggaacgaagaatcatcgtctccaaccacttgccaatacgtgcgtttcgagacgaagacgaaaccaacaagtggcgtttcgaatacgaccacgacagcttggtcctccaactcaaagacggcggctttggcgcggacgtcgaggtcttgtacgtgggttgcttaaacggagtcgagatcgacccctgcgatcaagacgacgtcgcatttgtcctcctccacgagttccgctgcgtgccgtgttttctaccgacggacgtcgtcaacaagttttatcacggcttctgtaagcactatctttggcctctgtttcactacatgctgcccatgtcagccagccacggtgcacgcttcgaccgtacactctggcaggcctacgtgtcggccaacaaggccttcgccgatagaatcatagaggttctaaacccggatgaggactacgtttggatccatgactaccatctcatggttttgcctactttcttgaggaaaaggtactaccgcgtcaagcttggtttctttctgcatagtccttttccgtcgtcggagatttaccggacgattccggtccgggaagagattctgagggctctgttgaattgtgatcttattgggttccatatatttgattatgcgaggcacttcttgtcctgctgtagcagaatgctgggtcttcattatgagttcaaaagagggtacatgggtttggagtattatggtcgaatagtgagtattaagatgttgcctgtggggattcatatgggtcagcttcagtctgttttgtcgcttgacgatactgccaagaaagtgaaggtgttgaaggaaaagtttgaggggaagattgtgattttgggggtggatgatttggacttgtttaaggggattagtttgaagtttctggcaatgaagcagcttttggaagagcatcagagtttgagggggaaggtggttatggtgcagataacaaacccggcacgaagccgaggcaaggatgtgcaggaggttctgaatgagaccagtgctattgcaaaagagatcaatgacaagtatggccaacccgggtatcagccccttgttgtcatcgatgggcctgtgacgacgcaagacaaagctgcatattatgccatttcggagtgctgtttggttaatgctgtgagggatgggatgaatttggtgccttacacgtacactgtttgtaggcaggggagctctgttttggacaaggtgttggagattggtgatgaggcagcagatacgacacctaaaccgaaaaagagtgtgatcattgtctctgaatttattggctgttctccgtctcttagtggcgcaatccgtgtcaatccctggaacattgatgctctctctgatgccatgaatttggtcatcacaatgtcggaggaagagaagcgtcttcgccatgacaaacattacaagtatatcagctctcatgatgttgcttattgggctcggagttttgatcaagatcttgagagagcttgcagagagcattatcggaggagatgctggggcatcggtttaggtttgggattcagagttgtagctttgggacccaacttcaggaagctttctgtggatcacattgcctatgcttacagaaatacaagtagccggctcatcttattggactatgacggcactatgacacctcaggcttcagtggacaaagctccaagcagtgaagttatttcggtcttgaattgcttatgcagtgatccgaaaaacattgttttcattgtgagtggcagagggaaggattctctcagcaagtggttttcgcagtgtgagaaactaggtttatcagcagagcatggttacttcaccaggtggactaaagattctccttggaagacttgctccttgacaatggatttcagttggaagaagattgtgctgcctattatggagccttacacagaagcaaccgatggttcttttatagaagagaaagacagtgcactggtctggcatcatcaagatgctgatcctcattttggctcatcccaggctaaagagctgcttgatcacctagagagtgtgcttgtcaatgagccggttgtagttaaaagaggccaacacattgtggaagtgaaaccactggatgtgaacaaaggtatagttgtggaggagctcatctccactttgcgaaatagggtgaagtcaccagatttcttgttatgcataggggatgatcgctcagatgaggatatgtttaagagcatcatgtatcccgaatcaagtccgtccttgccagccattgcagaagtctttgcttgcactgttggtcaaaagccaagcatggcaaaatactatctggatgatacagttgatgtcatcaagttgcttcaaggcctcgcttcagcatcggcacaaccaaagtctggaccgcagtttccggaagcatttgaagtgttcatttcaaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

878

Amino Acids

99.47

Weight (kDa)

5.93

Isoelectric Point (pI)

49.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18700
fragaria_vesca	FvH4_4g09780
prunus_persica	Prupe.1G095500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0404641
rosa_laevigata	RLG00000008917
rosa_multiflora	Rmu_sc0002699.1_g000030
rosa_roxburghii	Rroxscaffold_5G00348790
rosa_rugosa	Rorug04G0048300
rosa_samantha	Rh4AG124100 Rh4BG118100 Rh4CG132200
rosa_wichuraiana	Rw4G010060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	293, 335
AatII	GACGTC	3 cut(s)	333, 396, 453
AccB1I	GGYRCC	1 cut(s)	1366
AccB7I	CCANNNNNTGG	3 cut(s)	264, 658, 2591
AccII	CGCG	2 cut(s)	326, 696
AccIII	TCCGGA	1 cut(s)	2605
AciI	CCGC	6 cut(s)	138, 315, 326, 421, 694, 2597
AclI	AACGTT	1 cut(s)	174
AclWI	GGATC	7 cut(s)	64, 77, 634, 647, 1794, 1919, 2189
AcoI	YGGCCR	2 cut(s)	576, 1243
AcsI	RAATTY	4 cut(s)	31, 1360, 1487, 1567
AcuI	CTGAAG	4 cut(s)	947, 1753, 1851, 2553
AcyI	GRCGYC	3 cut(s)	330, 393, 450
AdeI	CACNNNGTG	2 cut(s)	2037, 2293
AfaI	GTAC	5 cut(s)	344, 553, 689, 890, 1379
AfiI	CCNNNNNNNGG	8 cut(s)	66, 264, 625, 658, 1180, 1770, 2204, 2591
AflIII	ACRYGT	2 cut(s)	570, 1374
AgsI	TTSAA	8 cut(s)	790, 880, 1012, 1084, 1909, 2558, 2618, 2631
AjnI	CCWGG	3 cut(s)	1535, 2033, 2214
AjuI	GAANNNNNNNTTGG	4 cut(s)	572, 604, 1091, 1123
Alw21I	GWGCWC	4 cut(s)	541, 1403, 2170, 2343
Alw26I	GTCTC	5 cut(s)	217, 237, 1199, 1486, 1512
Alw44I	GTGCAC	2 cut(s)	537, 2166
AlwI	GGATC	7 cut(s)	64, 77, 634, 647, 1794, 1919, 2189
Ama87I	CYCGRG	2 cut(s)	7, 1250
Aor13HI	TCCGGA	1 cut(s)	2605
AoxI	GGCC	9 cut(s)	57, 494, 564, 576, 585, 1243, 1280, 2281, 2560
ApaLI	GTGCAC	2 cut(s)	537, 2166
ApeKI	GCWGC	7 cut(s)	423, 514, 1102, 1304, 1439, 2104, 2227
ApoI	RAATTY	4 cut(s)	31, 1360, 1487, 1567
ArsI	GACNNNNNNTTYG	4 cut(s)	302, 334, 383, 415
Asp700I	GAANNNNTTC	1 cut(s)	771
AspLEI	GCGC	2 cut(s)	326, 1520
AspS9I	GGNCC	7 cut(s)	37, 57, 295, 760, 1280, 1760, 2594
AsuC2I	CCSGG	6 cut(s)	56, 620, 764, 1163, 1251, 1252
AsuHPI	GGTGA	5 cut(s)	1442, 2023, 2228, 2364, 2377
AsuII	TTCGAA	1 cut(s)	273
AvaI	CYCGRG	2 cut(s)	7, 1250
AvaII	GGWCC	5 cut(s)	37, 295, 760, 1760, 2594
AxyI	CCTNAGG	1 cut(s)	1860
BaeGI	GKGCMC	2 cut(s)	541, 2170
BaeI	ACNNNNGTAYC	4 cut(s)	880, 913, 1238, 1271
BalI	TGGCCA	1 cut(s)	1245
BamHI	GGATCC	2 cut(s)	69, 639
BanI	GGYRCC	1 cut(s)	1366
BanII	GRGCYC	4 cut(s)	784, 1403, 1660, 2343
BauI	CACGAG	1 cut(s)	413
BbsI	GAAGAC	4 cut(s)	255, 857, 1595, 2066
Bbv12I	GWGCWC	4 cut(s)	541, 1403, 2170, 2343
BbvI	GCAGC	7 cut(s)	410, 501, 1114, 1291, 1451, 2091, 2214
BccI	CCATC	4 cut(s)	660, 1271, 1346, 2132
BceAI	ACGGC	5 cut(s)	44, 328, 415, 487, 1861
BciT130I	CCWGG	3 cut(s)	1537, 2035, 2216
BciVI	GTATCC	1 cut(s)	2448
BclI	TGATCA	3 cut(s)	1473, 1669, 2233
BcnI	CCSGG	6 cut(s)	56, 620, 764, 1163, 1251, 1252
BcoDI	GTCTC	5 cut(s)	217, 237, 1199, 1486, 1512
BfaI	CTAG	2 cut(s)	2003, 2240
BfmI	CTRYAG	1 cut(s)	847
BfuI	GTATCC	1 cut(s)	2448
BglI	GCCNNNNNGGC	1 cut(s)	584
BglII	AGATCT	2 cut(s)	11, 1675
BisI	GCNGC	9 cut(s)	139, 316, 424, 515, 1103, 1305, 1440, 2105, 2228
BlsI	GCNGC	9 cut(s)	140, 317, 425, 516, 1104, 1306, 1441, 2106, 2229
Bme1390I	CCNGG	9 cut(s)	56, 620, 764, 1163, 1251, 1252, 1537, 2035, 2216
Bme18I	GGWCC	5 cut(s)	37, 295, 760, 1760, 2594
BmeT110I	CYCGRG	2 cut(s)	7, 1250
BmgT120I	GGNCC	7 cut(s)	37, 57, 295, 760, 1280, 1760, 2594
BmiI	GGNNCC	8 cut(s)	39, 71, 641, 809, 1368, 1761, 1762, 2118
BmrFI	CCNGG	9 cut(s)	56, 620, 764, 1163, 1251, 1252, 1537, 2035, 2216
BmsI	GCATC	9 cut(s)	1126, 1537, 1549, 1703, 1731, 2179, 2188, 2439, 2582
BoxI	GACNNNNGTC	1 cut(s)	449
BpiI	GAAGAC	4 cut(s)	255, 857, 1595, 2066
BplI	GAGNNNNNCTC	2 cut(s)	2330, 2362
Bpu14I	TTCGAA	1 cut(s)	273
BpuEI	CTTGAG	2 cut(s)	697, 1700
BpuMI	CCSGG	6 cut(s)	56, 620, 764, 1163, 1251, 1252
Bsa29I	ATCGAT	1 cut(s)	1275
BsaAI	YACGTR	4 cut(s)	233, 346, 571, 1377
BsaBI	GATNNNNATC	2 cut(s)	1674, 2193
BsaHI	GRCGYC	3 cut(s)	330, 393, 450
BsaI	GGTCTC	1 cut(s)	1199
BsaJI	CCNNGG	6 cut(s)	532, 1174, 1250, 1535, 2054, 2214
BsaWI	WCCGGW	3 cut(s)	747, 757, 2605
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	8 cut(s)	66, 264, 625, 658, 1180, 1770, 2204, 2591
Bse118I	RCCGGY	2 cut(s)	1821, 2263
Bse1I	ACTGG	3 cut(s)	1209, 2175, 2313
Bse21I	CCTNAGG	1 cut(s)	1860
Bse3DI	GCAATG	3 cut(s)	1101, 1791, 2466
Bse8I	GATNNNNATC	2 cut(s)	1674, 2193
BseAI	TCCGGA	1 cut(s)	2605
BseBI	CCWGG	3 cut(s)	1537, 2035, 2216
BseCI	ATCGAT	1 cut(s)	1275
BseDI	CCNNGG	6 cut(s)	532, 1174, 1250, 1535, 2054, 2214
BseJI	GATNNNNATC	2 cut(s)	1674, 2193
BseLI	CCNNNNNNNGG	8 cut(s)	66, 264, 625, 658, 1180, 1770, 2204, 2591
BseMI	GCAATG	3 cut(s)	1101, 1791, 2466
BseMII	CTCAG	4 cut(s)	767, 1874, 1987, 2421
BseNI	ACTGG	3 cut(s)	1209, 2175, 2313
BseRI	GAGGAG	3 cut(s)	398, 1723, 2351
BseSI	GKGCMC	2 cut(s)	541, 2170
BseXI	GCAGC	7 cut(s)	410, 501, 1114, 1291, 1451, 2091, 2214
BseYI	CCCAGC	2 cut(s)	859, 1716
BsgI	GTGCAG	2 cut(s)	1169, 1208
Bsh1236I	CGCG	2 cut(s)	326, 696
Bsh1285I	CGRYCG	2 cut(s)	130, 550
BshFI	GGCC	9 cut(s)	59, 496, 566, 578, 587, 1245, 1282, 2283, 2562
BshNI	GGYRCC	1 cut(s)	1366
BshVI	ATCGAT	1 cut(s)	1275
BsiEI	CGRYCG	2 cut(s)	130, 550
BsiHKAI	GWGCWC	4 cut(s)	541, 1403, 2170, 2343
BsiHKCI	CYCGRG	2 cut(s)	7, 1250
BslFI	GGGAC	1 cut(s)	1773
BslI	CCNNNNNNNGG	8 cut(s)	66, 264, 625, 658, 1180, 1770, 2204, 2591
BsmAI	GTCTC	5 cut(s)	217, 237, 1199, 1486, 1512
BsmBI	CGTCTC	3 cut(s)	217, 237, 1512
BsmFI	GGGAC	1 cut(s)	1773
BsmI	GAATGC	1 cut(s)	861
BsnI	GGCC	9 cut(s)	59, 496, 566, 578, 587, 1245, 1282, 2283, 2562
Bso31I	GGTCTC	1 cut(s)	1199
BsoBI	CYCGRG	2 cut(s)	7, 1250
Bsp119I	TTCGAA	1 cut(s)	273
Bsp1286I	GDGCHC	6 cut(s)	541, 784, 1403, 1660, 2170, 2343
Bsp13I	TCCGGA	1 cut(s)	2605
BspACI	CCGC	6 cut(s)	138, 315, 326, 421, 694, 2597
BspANI	GGCC	9 cut(s)	59, 496, 566, 578, 587, 1245, 1282, 2283, 2562
BspCNI	CTCAG	4 cut(s)	768, 1873, 1986, 2420
BspDI	ATCGAT	1 cut(s)	1275
BspEI	TCCGGA	1 cut(s)	2605
BspFNI	CGCG	2 cut(s)	326, 696
BspHI	TCATGA	1 cut(s)	1639
BspLI	GGNNCC	8 cut(s)	39, 71, 641, 809, 1368, 1761, 1762, 2118
BspPI	GGATC	7 cut(s)	64, 77, 634, 647, 1794, 1919, 2189
BspQI	GCTCTTC	1 cut(s)	1107
BspT104I	TTCGAA	1 cut(s)	273
BspT107I	GGYRCC	1 cut(s)	1366
BspTNI	GGTCTC	1 cut(s)	1199
BsrDI	GCAATG	3 cut(s)	1101, 1791, 2466
BsrFI	RCCGGY	2 cut(s)	1821, 2263
BsrI	ACTGG	3 cut(s)	1209, 2175, 2313
BssAI	RCCGGY	2 cut(s)	1821, 2263
BssECI	CCNNGG	6 cut(s)	532, 1174, 1250, 1535, 2054, 2214
BssNI	GRCGYC	3 cut(s)	330, 393, 450
BssSI	CACGAG	1 cut(s)	413
BssT1I	CCWWGG	1 cut(s)	2054
Bst2BI	CACGAG	1 cut(s)	413
Bst2UI	CCWGG	3 cut(s)	1537, 2035, 2216
Bst4CI	ACNGT	8 cut(s)	131, 187, 536, 551, 1384, 2165, 2491, 2536
Bst6I	CTCTTC	4 cut(s)	762, 1107, 1587, 2148
BstACI	GRCGYC	3 cut(s)	330, 393, 450
BstAPI	GCANNNNNTGC	1 cut(s)	1313
BstBAI	YACGTR	4 cut(s)	233, 346, 571, 1377
BstBI	TTCGAA	1 cut(s)	273
BstC8I	GCNNGC	9 cut(s)	87, 428, 529, 541, 564, 1690, 1823, 2463, 2485
BstDEI	CTNAG	5 cut(s)	776, 1511, 1860, 1973, 2407
BstDSI	CCRYGG	1 cut(s)	532
BstFNI	CGCG	2 cut(s)	326, 696
BstHHI	GCGC	2 cut(s)	326, 1520
BstMAI	GTCTC	5 cut(s)	217, 237, 1199, 1486, 1512
BstMCI	CGRYCG	2 cut(s)	130, 550
BstMWI	GCNNNNNNNGC	4 cut(s)	321, 584, 1313, 1655
BstNI	CCWGG	3 cut(s)	1537, 2035, 2216
BstNSI	RCATGY	1 cut(s)	514
BstPAI	GACNNNNGTC	1 cut(s)	449
BstSCI	CCNGG	9 cut(s)	54, 618, 762, 1161, 1249, 1250, 1535, 2033, 2214
BstSFI	CTRYAG	1 cut(s)	847
BstSLI	GKGCMC	2 cut(s)	541, 2170
BstUI	CGCG	2 cut(s)	326, 696
BstV1I	GCAGC	7 cut(s)	410, 501, 1114, 1291, 1451, 2091, 2214
BstV2I	GAAGAC	4 cut(s)	255, 857, 1595, 2066
BstX2I	RGATCY	4 cut(s)	11, 69, 639, 1675
BstXI	CCANNNNNNTGG	1 cut(s)	1570
BstYI	RGATCY	4 cut(s)	11, 69, 639, 1675
Bsu15I	ATCGAT	1 cut(s)	1275
Bsu36I	CCTNAGG	1 cut(s)	1860
BsuI	GTATCC	1 cut(s)	2448
BsuRI	GGCC	9 cut(s)	59, 496, 566, 578, 587, 1245, 1282, 2283, 2562
BsuTUI	ATCGAT	1 cut(s)	1275
BtgI	CCRYGG	1 cut(s)	532
BtsI	GCAGTG	3 cut(s)	1894, 1927, 1997
Cac8I	GCNNGC	9 cut(s)	87, 428, 529, 541, 564, 1690, 1823, 2463, 2485
CciI	TCATGA	1 cut(s)	1639
CfoI	GCGC	2 cut(s)	326, 1520
Cfr10I	RCCGGY	2 cut(s)	1821, 2263
Cfr13I	GGNCC	7 cut(s)	37, 57, 295, 760, 1280, 1760, 2594
Cfr9I	CCCGGG	1 cut(s)	1250
ClaI	ATCGAT	1 cut(s)	1275
CpoI	CGGWCCG	1 cut(s)	760
CseI	GACGC	3 cut(s)	685, 1300, 1589
CsiI	ACCWGGT	1 cut(s)	2033
Csp6I	GTAC	5 cut(s)	343, 552, 688, 889, 1378
CspI	CGGWCCG	1 cut(s)	760
CviQI	GTAC	5 cut(s)	343, 552, 688, 889, 1378
DdeI	CTNAG	5 cut(s)	776, 1511, 1860, 1973, 2407
DraIII	CACNNNGTG	2 cut(s)	2037, 2293
DrdI	GACNNNNNNGTC	2 cut(s)	293, 335
DseDI	GACNNNNNNGTC	2 cut(s)	293, 335
EaeI	YGGCCR	2 cut(s)	576, 1243
Eam1104I	CTCTTC	4 cut(s)	762, 1107, 1587, 2148
EarI	CTCTTC	4 cut(s)	762, 1107, 1587, 2148
Ecl136II	GAGCTC	2 cut(s)	1401, 2341
Eco130I	CCWWGG	1 cut(s)	2054
Eco147I	AGGCCT	3 cut(s)	566, 587, 2562
Eco24I	GRGCYC	4 cut(s)	784, 1403, 1660, 2343
Eco31I	GGTCTC	1 cut(s)	1199
Eco47I	GGWCC	5 cut(s)	37, 295, 760, 1760, 2594
Eco53kI	GAGCTC	2 cut(s)	1401, 2341
Eco57I	CTGAAG	4 cut(s)	947, 1753, 1851, 2553
Eco81I	CCTNAGG	1 cut(s)	1860
Eco88I	CYCGRG	2 cut(s)	7, 1250
EcoICRI	GAGCTC	2 cut(s)	1401, 2341
EcoO109I	RGGNCCY	1 cut(s)	1760
EcoRII	CCWGG	3 cut(s)	1535, 2033, 2214
EcoT14I	CCWWGG	1 cut(s)	2054
EcoT22I	ATGCAT	1 cut(s)	2393
EcoT38I	GRGCYC	4 cut(s)	784, 1403, 1660, 2343
ErhI	CCWWGG	1 cut(s)	2054
Esp3I	CGTCTC	3 cut(s)	217, 237, 1512
FalI	AAGNNNNNCTT	2 cut(s)	2214, 2246
FaqI	GGGAC	1 cut(s)	1773
FauNDI	CATATG	1 cut(s)	951
FbaI	TGATCA	3 cut(s)	1473, 1669, 2233
Fnu4HI	GCNGC	9 cut(s)	139, 316, 424, 515, 1103, 1305, 1440, 2105, 2228
FriOI	GRGCYC	4 cut(s)	784, 1403, 1660, 2343
Fsp4HI	GCNGC	9 cut(s)	139, 316, 424, 515, 1103, 1305, 1440, 2105, 2228
FspBI	CTAG	2 cut(s)	2003, 2240
GlaI	GCGC	2 cut(s)	325, 1519
GluI	GCNGC	9 cut(s)	139, 316, 424, 515, 1103, 1305, 1440, 2105, 2228
GsaI	CCCAGC	2 cut(s)	863, 1720
HaeIII	GGCC	9 cut(s)	59, 496, 566, 578, 587, 1245, 1282, 2283, 2562
HgaI	GACGC	3 cut(s)	685, 1300, 1589
HhaI	GCGC	2 cut(s)	326, 1520
Hin1I	GRCGYC	3 cut(s)	330, 393, 450
Hin6I	GCGC	2 cut(s)	324, 1518
HinP1I	GCGC	2 cut(s)	324, 1518
HincII	GTYRAC	1 cut(s)	457
HindII	GTYRAC	1 cut(s)	457
HindIII	AAGCTT	2 cut(s)	701, 1775
HphI	GGTGA	5 cut(s)	1442, 2023, 2228, 2364, 2377
Hpy166II	GTNNAC	8 cut(s)	457, 539, 554, 1380, 1873, 2040, 2168, 2317
Hpy8I	GTNNAC	8 cut(s)	457, 539, 554, 1380, 1873, 2040, 2168, 2317
Hpy99I	CGWCG	9 cut(s)	128, 335, 395, 398, 448, 455, 736, 739, 1294
HpyAV	CCTTC	5 cut(s)	598, 997, 1006, 1129, 1957
HpyCH4III	ACNGT	8 cut(s)	131, 187, 536, 551, 1384, 2165, 2491, 2536
HpyCH4IV	ACGT	9 cut(s)	174, 232, 330, 345, 393, 450, 570, 633, 1376
HpyF10VI	GCNNNNNNNGC	4 cut(s)	321, 584, 1313, 1655
HpyF3I	CTNAG	5 cut(s)	776, 1511, 1860, 1973, 2407
HpySE526I	ACGT	9 cut(s)	174, 232, 330, 345, 393, 450, 570, 633, 1376
Hsp92I	GRCGYC	3 cut(s)	330, 393, 450
HspAI	GCGC	2 cut(s)	324, 1518
KflI	GGGWCCC	1 cut(s)	1760
Kpn2I	TCCGGA	1 cut(s)	2605
KroI	GCCGGC	1 cut(s)	1821
KroNI	GCCGGC	1 cut(s)	1823
Ksp22I	TGATCA	3 cut(s)	1473, 1669, 2233
LguI	GCTCTTC	1 cut(s)	1107
LmnI	GCTCC	5 cut(s)	1398, 1885, 2072, 2116, 2338
Lsp1109I	GCAGC	7 cut(s)	410, 501, 1114, 1291, 1451, 2091, 2214
LweI	GCATC	9 cut(s)	1126, 1537, 1549, 1703, 1731, 2179, 2188, 2439, 2582
MabI	ACCWGGT	1 cut(s)	2033
MaeI	CTAG	2 cut(s)	2003, 2240
MaeII	ACGT	9 cut(s)	174, 232, 330, 345, 393, 450, 570, 633, 1376
MaeIII	GTNAC	3 cut(s)	1285, 2024, 2370
MflI	RGATCY	4 cut(s)	11, 69, 639, 1675
MhlI	GDGCHC	6 cut(s)	541, 784, 1403, 1660, 2170, 2343
MlsI	TGGCCA	1 cut(s)	1245
MluCI	AATT	6 cut(s)	31, 790, 1360, 1487, 1567, 1909
MluNI	TGGCCA	1 cut(s)	1245
MlyI	GAGTC	2 cut(s)	87, 372
MmeI	TCCRAC	9 cut(s)	47, 147, 183, 240, 325, 717, 1401, 1566, 2069
Mox20I	TGGCCA	1 cut(s)	1245
Mph1103I	ATGCAT	1 cut(s)	2393
MroI	TCCGGA	1 cut(s)	2605
MroNI	GCCGGC	1 cut(s)	1821
MroXI	GAANNNNTTC	1 cut(s)	771
MscI	TGGCCA	1 cut(s)	1245
MseI	TTAA	6 cut(s)	356, 927, 1068, 1338, 2274, 2424
MslI	CAYNNNNRTG	2 cut(s)	1580, 2187
Msp20I	TGGCCA	1 cut(s)	1245
MspA1I	CMGCKG	1 cut(s)	423
MspR9I	CCNGG	9 cut(s)	56, 620, 764, 1163, 1251, 1252, 1537, 2035, 2216
Mva1269I	GAATGC	1 cut(s)	861
MvaI	CCWGG	3 cut(s)	1537, 2035, 2216
MvnI	CGCG	2 cut(s)	326, 696
MwoI	GCNNNNNNNGC	4 cut(s)	321, 584, 1313, 1655
NaeI	GCCGGC	1 cut(s)	1823
NciI	CCSGG	6 cut(s)	56, 620, 764, 1163, 1251, 1252
NdeI	CATATG	1 cut(s)	951
NgoMIV	GCCGGC	1 cut(s)	1821
NlaIV	GGNNCC	8 cut(s)	39, 71, 641, 809, 1368, 1761, 1762, 2118
NmeAIII	GCCGAG	1 cut(s)	1199
NmuCI	GTSAC	2 cut(s)	1285, 2370
NsiI	ATGCAT	1 cut(s)	2393
NspI	RCATGY	1 cut(s)	514
NspV	TTCGAA	1 cut(s)	273
PaeR7I	CTCGAG	1 cut(s)	7
PagI	TCATGA	1 cut(s)	1639
PceI	AGGCCT	3 cut(s)	566, 587, 2562
PciSI	GCTCTTC	1 cut(s)	1107
PcsI	WCGNNNNNNNCGW	3 cut(s)	238, 378, 547
PctI	GAATGC	1 cut(s)	861
PdiI	GCCGGC	1 cut(s)	1823
PdmI	GAANNNNTTC	1 cut(s)	771
PfeI	GAWTC	9 cut(s)	204, 600, 754, 772, 946, 1740, 1967, 2048, 2444
PflFI	GACNNNGTC	2 cut(s)	392, 452
PflMI	CCANNNNNTGG	3 cut(s)	264, 658, 2591
PfoI	TCCNGGA	1 cut(s)	762
PkrI	GCNGC	9 cut(s)	140, 317, 425, 516, 1104, 1306, 1441, 2106, 2229
PleI	GAGTC	2 cut(s)	86, 371
PpsI	GAGTC	2 cut(s)	86, 371
Ppu21I	YACGTR	4 cut(s)	233, 346, 571, 1377
PpuMI	RGGWCCY	1 cut(s)	1760
PshAI	GACNNNNGTC	1 cut(s)	449
Psp124BI	GAGCTC	2 cut(s)	1403, 2343
Psp1406I	AACGTT	1 cut(s)	174
Psp5II	RGGWCCY	1 cut(s)	1760
Psp6I	CCWGG	3 cut(s)	1535, 2033, 2214
PspFI	CCCAGC	2 cut(s)	859, 1716
PspGI	CCWGG	3 cut(s)	1535, 2033, 2214
PspN4I	GGNNCC	8 cut(s)	39, 71, 641, 809, 1368, 1761, 1762, 2118
PspPI	GGNCC	7 cut(s)	37, 57, 295, 760, 1280, 1760, 2594
PspPPI	RGGWCCY	1 cut(s)	1760
PsuI	RGATCY	4 cut(s)	11, 69, 639, 1675
PsyI	GACNNNGTC	2 cut(s)	392, 452
RsaI	GTAC	5 cut(s)	344, 553, 689, 890, 1379
RsaNI	GTAC	5 cut(s)	343, 552, 688, 889, 1378
RseI	CAYNNNNRTG	2 cut(s)	1580, 2187
Rsr2I	CGGWCCG	1 cut(s)	760
RsrII	CGGWCCG	1 cut(s)	760
SacI	GAGCTC	2 cut(s)	1403, 2343
SapI	GCTCTTC	1 cut(s)	1107
SaqAI	TTAA	6 cut(s)	356, 927, 1068, 1338, 2274, 2424
SatI	GCNGC	9 cut(s)	139, 316, 424, 515, 1103, 1305, 1440, 2105, 2228
Sau96I	GGNCC	7 cut(s)	37, 57, 295, 760, 1280, 1760, 2594
SchI	GAGTC	2 cut(s)	87, 372
ScrFI	CCNGG	9 cut(s)	56, 620, 764, 1163, 1251, 1252, 1537, 2035, 2216
SduI	GDGCHC	6 cut(s)	541, 784, 1403, 1660, 2170, 2343
SexAI	ACCWGGT	1 cut(s)	2033
SfaNI	GCATC	9 cut(s)	1126, 1537, 1549, 1703, 1731, 2179, 2188, 2439, 2582
SfcI	CTRYAG	1 cut(s)	847
SfiI	GGCCNNNNNGGCC	1 cut(s)	584
Sfr274I	CTCGAG	1 cut(s)	7
SfuI	TTCGAA	1 cut(s)	273
SinI	GGWCC	5 cut(s)	37, 295, 760, 1760, 2594
SlaI	CTCGAG	1 cut(s)	7
SmaI	CCCGGG	1 cut(s)	1252
SmiMI	CAYNNNNRTG	2 cut(s)	1580, 2187
SmlI	CTYRAG	3 cut(s)	7, 676, 1679
SmoI	CTYRAG	3 cut(s)	7, 676, 1679
Sse9I	AATT	6 cut(s)	31, 790, 1360, 1487, 1567, 1909
SseBI	AGGCCT	3 cut(s)	566, 587, 2562
SsiI	CCGC	6 cut(s)	138, 315, 326, 421, 694, 2597
SspMI	CTAG	2 cut(s)	2003, 2240
SstI	GAGCTC	2 cut(s)	1403, 2343
StuI	AGGCCT	3 cut(s)	566, 587, 2562
StyD4I	CCNGG	9 cut(s)	54, 618, 762, 1161, 1249, 1250, 1535, 2033, 2214
StyI	CCWWGG	1 cut(s)	2054
TaaI	ACNGT	8 cut(s)	131, 187, 536, 551, 1384, 2165, 2491, 2536
TaiI	ACGT	9 cut(s)	177, 235, 333, 348, 396, 453, 573, 636, 1379
TaqII	GACCGA	1 cut(s)	1891
TasI	AATT	6 cut(s)	31, 790, 1360, 1487, 1567, 1909
TauI	GCSGC	2 cut(s)	141, 318
TfiI	GAWTC	9 cut(s)	204, 600, 754, 772, 946, 1740, 1967, 2048, 2444
Tru1I	TTAA	6 cut(s)	356, 927, 1068, 1338, 2274, 2424
Tru9I	TTAA	6 cut(s)	356, 927, 1068, 1338, 2274, 2424
TseFI	GTSAC	2 cut(s)	1285, 2370
TseI	GCWGC	7 cut(s)	423, 514, 1102, 1304, 1439, 2104, 2227
Tsp45I	GTSAC	2 cut(s)	1285, 2370
TspDTI	ATGAA	8 cut(s)	88, 857, 938, 1112, 1373, 1580, 1933, 2614
TspGWI	ACGGA	6 cut(s)	375, 461, 720, 1494, 1514, 2442
TspMI	CCCGGG	1 cut(s)	1250
Tth111I	GACNNNGTC	2 cut(s)	392, 452
Van91I	CCANNNNNTGG	3 cut(s)	264, 658, 2591
VneI	GTGCAC	2 cut(s)	537, 2166
VpaK11BI	GGWCC	5 cut(s)	37, 295, 760, 1760, 2594
XapI	RAATTY	4 cut(s)	31, 1360, 1487, 1567
XceI	RCATGY	1 cut(s)	514
XhoI	CTCGAG	1 cut(s)	7
XmaI	CCCGGG	1 cut(s)	1250
XmnI	GAANNNNTTC	1 cut(s)	771
XspI	CTAG	2 cut(s)	2003, 2240
ZraI	GACGTC	3 cut(s)	331, 394, 451
Zsp2I	ATGCAT	1 cut(s)	2393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.