Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002934.1

Orthogroup ID

OG0013282

Physical Location & Seq

Genomic Coordinates Forward (+)

76345 .. 83089

Gene Structure 6745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002934.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

atgggcaaggtgaagggaaagcatcgtcttgacaagtactactacctcgcgaaggagcacggctaccgctcccgtgcctcatggaagcttctccagctcgacgccaagcactccttcctccactccgcccacgccgtcctcgatctctgcgccgcccccggcggttggatgcaagtcgccgtgcagcgcgtccccgtcggcagcctcgtcgtcggcgtcgacttggtccccatcgctcctgttcgcggcgcccactctatccagcaggacatcacgaggaccgagtgcgtcgccaagctgaggaggctgatgagggaacaaggctgctctgcgttcgatttggtgcttcatgatggctcgcccaacgtcggtggagcctggtcgtctgaagctacggcgcagaacgccttggttattgattcggtgaagctggcgacgcagctcttggctcccaaaggcacatttgtcaccaagatcttcaggtcacaagattataatgctgtcttgttttgccttaaggagttatttgagaaggttgaacagtataaaccagcagctagtcgtagtgcatctgccgagacatatcttttgggttttaagtacaaggctccagcaaaaattgatcctcgcctacttgatatgaagcatctgtttaaagctgtggaacctcagaagaaggtggtggatgtacttagaggaacaaagcaaaaaagacaccgtgacgggtatgaagatggagacacaattttgagaaaagtatcttcagctgctgacttcatttggtctgtggatcctctaaatattcttggatctgtcacttccataacatttgatgatgtgacatctctgcccatcaaggatcatgctttgacaacagaggaggttaaaattctatgtgatgatctgcgtgttttggggaagcaagatttcaagcatcttttgaagtggcgggtgcagataagaaaggccttgtctccgtccgagaaagctgatgttactactgctccggatgttgaaaaggagactaaggaggatgatgatgacagaatactgaatgaaatggaagagcttacaaacgctatggagcgcaagaagaaacgggaaaagaagcttcaagcaaagaaacgtgctcaggacaaggtccggaaggcgactgggatgcaaatagatgcaatgcaagatggttatacagatgatactctgttttccctatctgccatcaagggtaagaaagatctggtagcgattgattccactgaatatgatggtgagaatggtgacttggcagatagcgaaaatgaggatatgcaggataaacctgaggaagcatcttccagtgatgtagactctgatgacggccgtagaagatatgatgaaaaaatggaagaacttctagatcaggcttatgaacattatgtggccaaaaaggagggaactgcaaagcagcgaaagcgtttgaaagaagaggctcaaagtttggaggatgttgatggtgaagatacaattccatctgattatgattcagacaaagatgaagctgatcaggaaaagaatcctctcttagatgctcttgattatggggaaggaccaactcaggaggaggttacaaataactggtttagtcagccgatctttgctgaagctgtagaacagggggatttggagaagtctgatagtgaagatgaaatgcaggttgaaaggctagaagagaatttggccctgcaagagaaacccaaggaaaagacggttattaaaaatgttaaagaaaagtctgaaaatcgtgttgcagggtccaattccaatcatgatgttaaagaaaagtctgaaaatcgtgttgcagggtccaattccaatcatgcactcaaagcaaagaaggcagatgatgattttgagatagtccctgctcccgatacagattcaagtgatgattcatcatcagatgagtctgaggatatggatacctatagaaaagctgagatactagcatgtgccaaaaaaatgttgtcaaagaagcaaagggaacagatgcttgatgatgcgtataataagtacatgcttgatgacgagggcttgcccaaatggtttttggatgaggaaaagaagcaccgacgaccaaataagccagtgaccaaagaagagattaatgcaatgaaagcgcagtttaaagaaattgatgcccggccagcaaagaaggtggcagaggctaaagctcgaaagaagcgggttgccatgaggaagcttgagaagattcgtaagaaggccaacacaatatcagatcaggcagatatctctgatcgttcaaagagcaagcaaatcgaccaattgtataagaaggcagtgcccaagaggcctaaaaaggagtatgtggttgcgaagaaaggtgttcaagtcaaggttggcaagggtaaggtccgtgttgatgcaagaatgaaaaaggatgcaaggggtcgcgggacgggtaataaatgggcaggaaaaggcagtgaaaagaaaggaaaaaatatgaaggacaagagaggtaaaggtaaaggatctgggaagccttcaggagggaagccttctggaaaggttggtagcaaaggaagaaagatgggcatgcatgactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000460 GO:0000463 GO:0000466 GO:0000470 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008171 GO:0008173 GO:0008649 GO:0008650 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016435 GO:0016436 GO:0016740 GO:0016741 GO:0022613 GO:0030684 GO:0030687 GO:0031167 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3381 FtsJ Spb1_C

Protein Analysis

868

Amino Acids

97.54

Weight (kDa)

8.73

Isoelectric Point (pI)

37.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25730
fragaria_vesca	FvH4_2g09160
malus_domestica	MD05G1064300.v1.1 MD10G1073000.v1.1
prunus_persica	Prupe.8G094400_v2.0.a1
pyrus_communis	pycom05g05540 pycom10g05760
rosa_chinensis	RchiOBHm_Chr6g0265021
rosa_laevigata	RLG00000014215 RLG00000014220
rosa_multiflora	Rmu_sc0002934.1_g000022
rosa_roxburghii	Rroxscaffold_175G00432100
rosa_rugosa	Rorug06G0013800
rosa_samantha	Rh6AG136200 Rh6BG133000 Rh6CG131600 Rh6DG118800
rosa_wichuraiana	Rw6G011740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	495
Acc36I	ACCTGC	1 cut(s)	1681
AccB1I	GGYRCC	1 cut(s)	248
AccBSI	CCGCTC	1 cut(s)	69
AccI	GTMKAC	2 cut(s)	219, 1344
AccII	CGCG	4 cut(s)	50, 189, 246, 2451
AccIII	TCCGGA	2 cut(s)	1006, 1143
AciI	CCGC	8 cut(s)	67, 126, 153, 162, 246, 949, 2221, 2451
AclWI	GGATC	6 cut(s)	617, 785, 798, 817, 867, 2539
AcoI	YGGCCR	3 cut(s)	1357, 1419, 2180
AcsI	RAATTY	2 cut(s)	888, 1711
AcuI	CTGAAG	5 cut(s)	408, 463, 747, 1659, 2529
AcyI	GRCGYC	3 cut(s)	102, 216, 249
AfaI	GTAC	4 cut(s)	38, 602, 690, 2051
AfiI	CCNNNNNNNGG	6 cut(s)	52, 165, 245, 300, 368, 2549
AflII	CTTAAG	1 cut(s)	515
AjnI	CCWGG	1 cut(s)	377
AjuI	GAANNNNNNNTTGG	4 cut(s)	98, 130, 1265, 1297
Alw21I	GWGCWC	2 cut(s)	60, 1132
Alw26I	GTCTC	4 cut(s)	572, 732, 978, 1016
AlwI	GGATC	6 cut(s)	617, 785, 798, 817, 867, 2539
AlwNI	CAGNNNCTG	1 cut(s)	770
Aor13HI	TCCGGA	2 cut(s)	1006, 1143
AoxI	GGCC	7 cut(s)	966, 1357, 1419, 1716, 2180, 2259, 2348
ApeKI	GCWGC	7 cut(s)	184, 201, 324, 439, 554, 767, 1444
ApoI	RAATTY	2 cut(s)	888, 1711
ArsI	GACNNNNNNTTYG	2 cut(s)	571, 603
AseI	ATTAAT	1 cut(s)	2142
Asp700I	GAANNNNTTC	1 cut(s)	1389
AspLEI	GCGC	6 cut(s)	152, 189, 251, 400, 1089, 2158
AspS9I	GGNCC	8 cut(s)	226, 279, 1141, 1586, 1717, 1791, 1842, 2410
AsuC2I	CCSGG	2 cut(s)	159, 2179
AsuHPI	GGTGA	6 cut(s)	22, 436, 460, 1280, 1289, 1505
AvaII	GGWCC	7 cut(s)	226, 279, 1141, 1586, 1791, 1842, 2410
AxyI	CCTNAGG	1 cut(s)	1320
BaeGI	GKGCMC	1 cut(s)	2343
BalI	TGGCCA	1 cut(s)	1421
BamHI	GGATCC	1 cut(s)	790
BanI	GGYRCC	1 cut(s)	248
BauI	CACGAG	1 cut(s)	274
Bbv12I	GWGCWC	2 cut(s)	60, 1132
BbvCI	CCTCAGC	1 cut(s)	299
BbvI	GCAGC	7 cut(s)	196, 213, 311, 451, 566, 754, 1456
BceAI	ACGGC	6 cut(s)	76, 119, 164, 411, 1344, 1372
BcgI	CGANNNNNNTGC	6 cut(s)	190, 224, 1141, 1175, 2296, 2330
BciT130I	CCWGG	1 cut(s)	379
BciVI	GTATCC	1 cut(s)	1951
BclI	TGATCA	1 cut(s)	1540
BcnI	CCSGG	2 cut(s)	159, 2179
BcoDI	GTCTC	4 cut(s)	572, 732, 978, 1016
BfaI	CTAG	4 cut(s)	558, 1394, 1703, 1982
BfmI	CTRYAG	2 cut(s)	1644, 1963
BfoI	RGCGCY	1 cut(s)	252
BfrI	CTTAAG	1 cut(s)	515
BfuAI	ACCTGC	1 cut(s)	1681
BfuI	GTATCC	1 cut(s)	1951
BglI	GCCNNNNNGGC	1 cut(s)	2347
BglII	AGATCT	2 cut(s)	474, 1234
BisI	GCNGC	9 cut(s)	153, 185, 202, 247, 325, 440, 555, 768, 1445
BlsI	GCNGC	9 cut(s)	154, 186, 203, 248, 326, 441, 556, 769, 1446
BmcAI	AGTACT	1 cut(s)	38
Bme1390I	CCNGG	3 cut(s)	159, 379, 2179
Bme18I	GGWCC	7 cut(s)	226, 279, 1141, 1586, 1791, 1842, 2410
BmgT120I	GGNCC	8 cut(s)	226, 279, 1141, 1586, 1717, 1791, 1842, 2410
BmiI	GGNNCC	9 cut(s)	228, 250, 376, 450, 609, 666, 792, 1792, 1843
BmrFI	CCNGG	3 cut(s)	159, 379, 2179
BmrI	ACTGGG	1 cut(s)	1164
BmuI	ACTGGG	1 cut(s)	1164
BpmI	CTGGAG	2 cut(s)	77, 594
Bpu10I	CCTNAGC	2 cut(s)	299, 1131
BpuEI	CTTGAG	1 cut(s)	2261
BpuMI	CCSGG	2 cut(s)	159, 2179
BsaHI	GRCGYC	3 cut(s)	102, 216, 249
BsaJI	CCNNGG	3 cut(s)	157, 408, 1734
BsaWI	WCCGGW	2 cut(s)	1006, 1143
BsaXI	ACNNNNNCTCC	2 cut(s)	988, 1018
Bsc4I	CCNNNNNNNGG	6 cut(s)	52, 165, 245, 300, 368, 2549
Bse1I	ACTGG	4 cut(s)	1159, 1335, 1619, 2123
Bse21I	CCTNAGG	1 cut(s)	1320
Bse3DI	GCAATG	2 cut(s)	1179, 2154
BseAI	TCCGGA	2 cut(s)	1006, 1143
BseBI	CCWGG	1 cut(s)	379
BseDI	CCNNGG	3 cut(s)	157, 408, 1734
BseGI	GGATG	8 cut(s)	174, 691, 1015, 1039, 1164, 1489, 2095, 2443
BseLI	CCNNNNNNNGG	6 cut(s)	52, 165, 245, 300, 368, 2549
BseMI	GCAATG	2 cut(s)	1179, 2154
BseMII	CTCAG	7 cut(s)	290, 683, 1145, 1311, 1607, 1938, 1965
BseNI	ACTGG	4 cut(s)	1159, 1335, 1619, 2123
BseRI	GAGGAG	3 cut(s)	316, 893, 1613
BseSI	GKGCMC	1 cut(s)	2343
BseX3I	CGGCCG	1 cut(s)	1357
BseXI	GCAGC	7 cut(s)	196, 213, 311, 451, 566, 754, 1456
BsgI	GTGCAG	2 cut(s)	203, 974
Bsh1236I	CGCG	4 cut(s)	50, 189, 246, 2451
Bsh1285I	CGRYCG	1 cut(s)	1360
BshFI	GGCC	7 cut(s)	968, 1359, 1421, 1718, 2182, 2261, 2350
BshNI	GGYRCC	1 cut(s)	248
BsiEI	CGRYCG	1 cut(s)	1360
BsiHKAI	GWGCWC	2 cut(s)	60, 1132
BsiSI	CCGG	4 cut(s)	159, 1007, 1144, 2179
BslFI	GGGAC	4 cut(s)	176, 212, 1883, 2467
BslI	CCNNNNNNNGG	6 cut(s)	52, 165, 245, 300, 368, 2549
BsmAI	GTCTC	4 cut(s)	572, 732, 978, 1016
BsmFI	GGGAC	4 cut(s)	176, 212, 1883, 2467
BsnI	GGCC	7 cut(s)	968, 1359, 1421, 1718, 2182, 2261, 2350
Bsp1286I	GDGCHC	3 cut(s)	60, 1132, 2343
Bsp13I	TCCGGA	2 cut(s)	1006, 1143
Bsp68I	TCGCGA	1 cut(s)	50
BspACI	CCGC	8 cut(s)	67, 126, 153, 162, 246, 949, 2221, 2451
BspANI	GGCC	7 cut(s)	968, 1359, 1421, 1718, 2182, 2261, 2350
BspCNI	CTCAG	7 cut(s)	291, 682, 1144, 1312, 1606, 1939, 1966
BspEI	TCCGGA	2 cut(s)	1006, 1143
BspFNI	CGCG	4 cut(s)	50, 189, 246, 2451
BspHI	TCATGA	2 cut(s)	349, 1804
BspLI	GGNNCC	9 cut(s)	228, 250, 376, 450, 609, 666, 792, 1792, 1843
BspMI	ACCTGC	1 cut(s)	1681
BspPI	GGATC	6 cut(s)	617, 785, 798, 817, 867, 2539
BspQI	GCTCTTC	1 cut(s)	1059
BspT107I	GGYRCC	1 cut(s)	248
BspTI	CTTAAG	1 cut(s)	515
BsrBI	CCGCTC	1 cut(s)	69
BsrDI	GCAATG	2 cut(s)	1179, 2154
BsrI	ACTGG	4 cut(s)	1159, 1335, 1619, 2123
BssECI	CCNNGG	3 cut(s)	157, 408, 1734
BssNI	GRCGYC	3 cut(s)	102, 216, 249
BssSI	CACGAG	1 cut(s)	274
BssT1I	CCWWGG	2 cut(s)	408, 1734
Bst2BI	CACGAG	1 cut(s)	274
Bst2UI	CCWGG	1 cut(s)	379
Bst4CI	ACNGT	3 cut(s)	543, 719, 1747
Bst6I	CTCTTC	4 cut(s)	1059, 1458, 1701, 2130
BstACI	GRCGYC	3 cut(s)	102, 216, 249
BstAFI	CTTAAG	1 cut(s)	515
BstC8I	GCNNGC	6 cut(s)	359, 432, 2072, 2184, 2309, 2597
BstENI	CCTNNNNNAGG	2 cut(s)	50, 2547
BstF5I	GGATG	8 cut(s)	174, 691, 1015, 1039, 1164, 1489, 2095, 2443
BstFNI	CGCG	4 cut(s)	50, 189, 246, 2451
BstH2I	RGCGCY	1 cut(s)	252
BstHHI	GCGC	6 cut(s)	152, 189, 251, 400, 1089, 2158
BstMAI	GTCTC	4 cut(s)	572, 732, 978, 1016
BstMCI	CGRYCG	1 cut(s)	1360
BstNI	CCWGG	1 cut(s)	379
BstNSI	RCATGY	3 cut(s)	1989, 2056, 2599
BstSCI	CCNGG	3 cut(s)	157, 377, 2177
BstSFI	CTRYAG	2 cut(s)	1644, 1963
BstSLI	GKGCMC	1 cut(s)	2343
BstUI	CGCG	4 cut(s)	50, 189, 246, 2451
BstV1I	GCAGC	7 cut(s)	196, 213, 311, 451, 566, 754, 1456
BstX2I	RGATCY	5 cut(s)	474, 790, 809, 1234, 2531
BstYI	RGATCY	5 cut(s)	474, 790, 809, 1234, 2531
BstZI	CGGCCG	1 cut(s)	1357
Bsu36I	CCTNAGG	1 cut(s)	1320
BsuI	GTATCC	1 cut(s)	1951
BsuRI	GGCC	7 cut(s)	968, 1359, 1421, 1718, 2182, 2261, 2350
BtgZI	GCGATG	1 cut(s)	217
BtsCI	GGATG	8 cut(s)	174, 691, 1015, 1039, 1164, 1489, 2095, 2443
BtsI	GCAGTG	2 cut(s)	2343, 2488
BtsIMutI	CAGTG	5 cut(s)	1254, 1342, 2130, 2343, 2488
BtuMI	TCGCGA	1 cut(s)	50
BveI	ACCTGC	1 cut(s)	1681
Cac8I	GCNNGC	6 cut(s)	359, 432, 2072, 2184, 2309, 2597
CaiI	CAGNNNCTG	1 cut(s)	770
CciI	TCATGA	2 cut(s)	349, 1804
CfoI	GCGC	6 cut(s)	152, 189, 251, 400, 1089, 2158
Cfr13I	GGNCC	8 cut(s)	226, 279, 1141, 1586, 1717, 1791, 1842, 2410
CseI	GACGC	5 cut(s)	110, 178, 205, 277, 445
Csp6I	GTAC	4 cut(s)	37, 601, 689, 2050
CspCI	CAANNNNNGTGG	4 cut(s)	352, 387, 2175, 2210
CviQI	GTAC	4 cut(s)	37, 601, 689, 2050
DinI	GGCGCC	1 cut(s)	250
DraI	TTTAAA	2 cut(s)	655, 2164
EaeI	YGGCCR	3 cut(s)	1357, 1419, 2180
EagI	CGGCCG	1 cut(s)	1357
Eam1104I	CTCTTC	4 cut(s)	1059, 1458, 1701, 2130
EarI	CTCTTC	4 cut(s)	1059, 1458, 1701, 2130
EciI	GGCGGA	1 cut(s)	115
EclXI	CGGCCG	1 cut(s)	1357
Eco130I	CCWWGG	2 cut(s)	408, 1734
Eco147I	AGGCCT	2 cut(s)	968, 2350
Eco32I	GATATC	1 cut(s)	2287
Eco47I	GGWCC	7 cut(s)	226, 279, 1141, 1586, 1791, 1842, 2410
Eco52I	CGGCCG	1 cut(s)	1357
Eco57I	CTGAAG	5 cut(s)	408, 463, 747, 1659, 2529
Eco81I	CCTNAGG	1 cut(s)	1320
EcoNI	CCTNNNNNAGG	2 cut(s)	50, 2547
EcoRII	CCWGG	1 cut(s)	377
EcoRV	GATATC	1 cut(s)	2287
EcoT14I	CCWWGG	2 cut(s)	408, 1734
EcoT22I	ATGCAT	1 cut(s)	2601
EgeI	GGCGCC	1 cut(s)	250
EheI	GGCGCC	1 cut(s)	250
ErhI	CCWWGG	2 cut(s)	408, 1734
FalI	AAGNNNNNCTT	2 cut(s)	98, 130
FaqI	GGGAC	4 cut(s)	176, 212, 1883, 2467
FauI	CCCGC	3 cut(s)	942, 2214, 2444
FbaI	TGATCA	1 cut(s)	1540
FblI	GTMKAC	2 cut(s)	219, 1344
Fnu4HI	GCNGC	9 cut(s)	153, 185, 202, 247, 325, 440, 555, 768, 1445
FokI	GGATG	8 cut(s)	181, 698, 1022, 1046, 1171, 1496, 2102, 2450
Fsp4HI	GCNGC	9 cut(s)	153, 185, 202, 247, 325, 440, 555, 768, 1445
FspBI	CTAG	4 cut(s)	558, 1394, 1703, 1982
GlaI	GCGC	6 cut(s)	151, 188, 250, 399, 1088, 2157
GluI	GCNGC	9 cut(s)	153, 185, 202, 247, 325, 440, 555, 768, 1445
GsuI	CTGGAG	2 cut(s)	77, 594
HaeII	RGCGCY	1 cut(s)	252
HaeIII	GGCC	7 cut(s)	968, 1359, 1421, 1718, 2182, 2261, 2350
HapII	CCGG	4 cut(s)	159, 1007, 1144, 2179
HgaI	GACGC	5 cut(s)	110, 178, 205, 277, 445
HhaI	GCGC	6 cut(s)	152, 189, 251, 400, 1089, 2158
Hin1I	GRCGYC	3 cut(s)	102, 216, 249
Hin6I	GCGC	6 cut(s)	150, 187, 249, 398, 1087, 2156
HinP1I	GCGC	6 cut(s)	150, 187, 249, 398, 1087, 2156
HincII	GTYRAC	1 cut(s)	220
HindII	GTYRAC	1 cut(s)	220
HindIII	AAGCTT	3 cut(s)	86, 1109, 2237
HinfI	GANTC	9 cut(s)	419, 1250, 1346, 1520, 1552, 1916, 1928, 1943, 2248
HpaII	CCGG	4 cut(s)	159, 1007, 1144, 2179
HphI	GGTGA	6 cut(s)	22, 436, 460, 1280, 1289, 1505
Hpy166II	GTNNAC	2 cut(s)	220, 1345
Hpy8I	GTNNAC	2 cut(s)	220, 1345
Hpy99I	CGWCG	9 cut(s)	104, 200, 212, 215, 221, 293, 371, 439, 2112
HpyCH4III	ACNGT	3 cut(s)	543, 719, 1747
HpyCH4IV	ACGT	2 cut(s)	366, 1126
HpySE526I	ACGT	2 cut(s)	366, 1126
Hsp92I	GRCGYC	3 cut(s)	102, 216, 249
HspAI	GCGC	6 cut(s)	150, 187, 249, 398, 1087, 2156
KasI	GGCGCC	1 cut(s)	248
Kpn2I	TCCGGA	2 cut(s)	1006, 1143
Ksp22I	TGATCA	1 cut(s)	1540
LguI	GCTCTTC	1 cut(s)	1059
LmnI	GCTCC	9 cut(s)	55, 74, 241, 374, 454, 613, 1009, 1084, 1909
Lsp1109I	GCAGC	7 cut(s)	196, 213, 311, 451, 566, 754, 1456
MaeI	CTAG	4 cut(s)	558, 1394, 1703, 1982
MaeII	ACGT	2 cut(s)	366, 1126
MaeIII	GTNAC	9 cut(s)	466, 483, 719, 814, 838, 994, 1277, 1603, 2125
MbiI	CCGCTC	1 cut(s)	69
MfeI	CAATTG	1 cut(s)	2321
MflI	RGATCY	5 cut(s)	474, 790, 809, 1234, 2531
MhlI	GDGCHC	3 cut(s)	60, 1132, 2343
MlsI	TGGCCA	1 cut(s)	1421
MluCI	AATT	9 cut(s)	618, 744, 888, 1503, 1711, 1795, 1846, 2169, 2321
MluNI	TGGCCA	1 cut(s)	1421
Mly113I	GGCGCC	1 cut(s)	249
MlyI	GAGTC	2 cut(s)	1340, 1952
MmeI	TCCRAC	1 cut(s)	146
Mox20I	TGGCCA	1 cut(s)	1421
Mph1103I	ATGCAT	1 cut(s)	2601
MroI	TCCGGA	2 cut(s)	1006, 1143
MroXI	GAANNNNTTC	1 cut(s)	1389
MscI	TGGCCA	1 cut(s)	1421
MseI	TTAA	9 cut(s)	516, 597, 654, 885, 1752, 1761, 1812, 2142, 2163
Msp20I	TGGCCA	1 cut(s)	1421
MspA1I	CMGCKG	1 cut(s)	767
MspCI	CTTAAG	1 cut(s)	515
MspI	CCGG	4 cut(s)	159, 1007, 1144, 2179
MspR9I	CCNGG	3 cut(s)	159, 379, 2179
MunI	CAATTG	1 cut(s)	2321
MvaI	CCWGG	1 cut(s)	379
MvnI	CGCG	4 cut(s)	50, 189, 246, 2451
NarI	GGCGCC	1 cut(s)	249
NciI	CCSGG	2 cut(s)	159, 2179
NlaIV	GGNNCC	9 cut(s)	228, 250, 376, 450, 609, 666, 792, 1792, 1843
NmeAIII	GCCGAG	1 cut(s)	601
NmuCI	GTSAC	7 cut(s)	466, 483, 719, 814, 838, 1277, 2125
NruI	TCGCGA	1 cut(s)	50
NsiI	ATGCAT	1 cut(s)	2601
NspI	RCATGY	3 cut(s)	1989, 2056, 2599
PaeI	GCATGC	1 cut(s)	2599
PagI	TCATGA	2 cut(s)	349, 1804
PceI	AGGCCT	2 cut(s)	968, 2350
PciSI	GCTCTTC	1 cut(s)	1059
PcsI	WCGNNNNNNNCGW	4 cut(s)	138, 204, 213, 216
PdmI	GAANNNNTTC	1 cut(s)	1389
PfeI	GAWTC	7 cut(s)	419, 1250, 1520, 1552, 1916, 1928, 2248
PflFI	GACNNNGTC	2 cut(s)	224, 1139
PkrI	GCNGC	9 cut(s)	154, 186, 203, 248, 326, 441, 556, 769, 1446
PleI	GAGTC	2 cut(s)	1340, 1951
PluTI	GGCGCC	1 cut(s)	252
PpsI	GAGTC	2 cut(s)	1340, 1951
PshBI	ATTAAT	1 cut(s)	2142
PsiI	TTATAA	1 cut(s)	495
Psp6I	CCWGG	1 cut(s)	377
PspGI	CCWGG	1 cut(s)	377
PspN4I	GGNNCC	9 cut(s)	228, 250, 376, 450, 609, 666, 792, 1792, 1843
PspPI	GGNCC	8 cut(s)	226, 279, 1141, 1586, 1717, 1791, 1842, 2410
PstNI	CAGNNNCTG	1 cut(s)	770
PsuI	RGATCY	5 cut(s)	474, 790, 809, 1234, 2531
PsyI	GACNNNGTC	2 cut(s)	224, 1139
PvuII	CAGCTG	1 cut(s)	767
RruI	TCGCGA	1 cut(s)	50
RsaI	GTAC	4 cut(s)	38, 602, 690, 2051
RsaNI	GTAC	4 cut(s)	37, 601, 689, 2050
SalI	GTCGAC	1 cut(s)	218
SapI	GCTCTTC	1 cut(s)	1059
SaqAI	TTAA	9 cut(s)	516, 597, 654, 885, 1752, 1761, 1812, 2142, 2163
SatI	GCNGC	9 cut(s)	153, 185, 202, 247, 325, 440, 555, 768, 1445
Sau96I	GGNCC	8 cut(s)	226, 279, 1141, 1586, 1717, 1791, 1842, 2410
ScaI	AGTACT	1 cut(s)	38
SchI	GAGTC	2 cut(s)	1340, 1952
ScrFI	CCNGG	3 cut(s)	159, 379, 2179
SduI	GDGCHC	3 cut(s)	60, 1132, 2343
SfcI	CTRYAG	2 cut(s)	1644, 1963
SfoI	GGCGCC	1 cut(s)	250
SinI	GGWCC	7 cut(s)	226, 279, 1141, 1586, 1791, 1842, 2410
SmlI	CTYRAG	2 cut(s)	515, 2240
SmoI	CTYRAG	2 cut(s)	515, 2240
SphI	GCATGC	1 cut(s)	2599
Sse9I	AATT	9 cut(s)	618, 744, 888, 1503, 1711, 1795, 1846, 2169, 2321
SseBI	AGGCCT	2 cut(s)	968, 2350
SsiI	CCGC	8 cut(s)	67, 126, 153, 162, 246, 949, 2221, 2451
SspDI	GGCGCC	1 cut(s)	248
SspI	AATATT	1 cut(s)	802
SspMI	CTAG	4 cut(s)	558, 1394, 1703, 1982
StuI	AGGCCT	2 cut(s)	968, 2350
StyD4I	CCNGG	3 cut(s)	157, 377, 2177
StyI	CCWWGG	2 cut(s)	408, 1734
TaaI	ACNGT	3 cut(s)	543, 719, 1747
TaiI	ACGT	2 cut(s)	369, 1129
TaqI	TCGA	6 cut(s)	99, 141, 219, 336, 2212, 2316
TaqII	GACCGA	1 cut(s)	296
TasI	AATT	9 cut(s)	618, 744, 888, 1503, 1711, 1795, 1846, 2169, 2321
TatI	WGTACW	4 cut(s)	36, 600, 688, 2049
TauI	GCSGC	2 cut(s)	155, 249
TfiI	GAWTC	7 cut(s)	419, 1250, 1520, 1552, 1916, 1928, 2248
Tru1I	TTAA	9 cut(s)	516, 597, 654, 885, 1752, 1761, 1812, 2142, 2163
Tru9I	TTAA	9 cut(s)	516, 597, 654, 885, 1752, 1761, 1812, 2142, 2163
TscAI	CASTG	5 cut(s)	1261, 1342, 2130, 2343, 2488
TseFI	GTSAC	7 cut(s)	466, 483, 719, 814, 838, 1277, 2125
TseI	GCWGC	7 cut(s)	184, 201, 324, 439, 554, 767, 1444
Tsp45I	GTSAC	7 cut(s)	466, 483, 719, 814, 838, 1277, 2125
TspGWI	ACGGA	2 cut(s)	966, 2402
TspRI	CASTG	5 cut(s)	1261, 1342, 2130, 2343, 2488
Tth111I	GACNNNGTC	2 cut(s)	224, 1139
Vha464I	CTTAAG	1 cut(s)	515
VpaK11BI	GGWCC	7 cut(s)	226, 279, 1141, 1586, 1791, 1842, 2410
VspI	ATTAAT	1 cut(s)	2142
XagI	CCTNNNNNAGG	2 cut(s)	50, 2547
XapI	RAATTY	2 cut(s)	888, 1711
XbaI	TCTAGA	1 cut(s)	1393
XceI	RCATGY	3 cut(s)	1989, 2056, 2599
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2083
XmiI	GTMKAC	2 cut(s)	219, 1344
XmnI	GAANNNNTTC	1 cut(s)	1389
XspI	CTAG	4 cut(s)	558, 1394, 1703, 1982
ZrmI	AGTACT	1 cut(s)	38
Zsp2I	ATGCAT	1 cut(s)	2601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.