Rmu_sc0002963.1_g000020

Cell division control protein 48 homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002963.1
Physical Location & Seq
Reverse (-)
128365 .. 129245
881 bp
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UTR
Exon/CDS
Intron
Rmu_sc0002963.1_g000020.1.cds

Sequence Viewer

Length: 201 bp
atgctgattgcaaaggctgttgtaagtgaggcaggagctaattttattttctttgacgaggtggatgctttgacaacaaaacagggcagacaagggggatgggacgttgttcggctattgaaccagttacttgcagagttagatggtgcagatccgcagcggggtatatttgttaatagggtagagatgagcgctgtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

66

Amino Acids

7.19

Weight (kDa)

4.56

Isoelectric Point (pI)

22.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 155, 160
AclWI GGATC 1 cut(s) 146
AfeI AGCGCT 1 cut(s) 193
AfiI CCNNNNNNNGG 1 cut(s) 161
AgsI TTSAA 1 cut(s) 121
AluBI AGCT 1 cut(s) 38
AluI AGCT 1 cut(s) 38
AlwI GGATC 1 cut(s) 146
Aor51HI AGCGCT 1 cut(s) 193
ApeKI GCWGC 1 cut(s) 157
AspLEI GCGC 1 cut(s) 194
BbvI GCAGC 1 cut(s) 169
BccI CCATC 2 cut(s) 93, 137
BcgI CGANNNNNNTGC 2 cut(s) 47, 81
BfoI RGCGCY 1 cut(s) 195
BisI GCNGC 1 cut(s) 158
BlsI GCNGC 1 cut(s) 159
BmsI GCATC 1 cut(s) 55
Bsc4I CCNNNNNNNGG 1 cut(s) 161
Bse1I ACTGG 1 cut(s) 124
BseGI GGATG 2 cut(s) 70, 104
BseLI CCNNNNNNNGG 1 cut(s) 161
BseNI ACTGG 1 cut(s) 124
BseXI GCAGC 1 cut(s) 169
BsgI GTGCAG 1 cut(s) 168
BslFI GGGAC 1 cut(s) 116
BslI CCNNNNNNNGG 1 cut(s) 161
BsmFI GGGAC 1 cut(s) 116
Bsp143I GATC 1 cut(s) 151
BspACI CCGC 2 cut(s) 155, 160
BspPI GGATC 1 cut(s) 146
BsrI ACTGG 1 cut(s) 124
BssMI GATC 1 cut(s) 151
BstF5I GGATG 2 cut(s) 70, 104
BstH2I RGCGCY 1 cut(s) 195
BstHHI GCGC 1 cut(s) 194
BstKTI GATC 1 cut(s) 154
BstMBI GATC 1 cut(s) 151
BstV1I GCAGC 1 cut(s) 169
BstX2I RGATCY 1 cut(s) 151
BstYI RGATCY 1 cut(s) 151
BtsCI GGATG 2 cut(s) 70, 104
CfoI GCGC 1 cut(s) 194
CviJI RGCY 3 cut(s) 17, 38, 115
CviKI_1 RGCY 3 cut(s) 17, 38, 115
DpnI GATC 1 cut(s) 153
DpnII GATC 1 cut(s) 151
Eco47III AGCGCT 1 cut(s) 193
FaiI YATR 1 cut(s) 167
FaqI GGGAC 1 cut(s) 116
FauI CCCGC 1 cut(s) 153
Fnu4HI GCNGC 1 cut(s) 158
FokI GGATG 2 cut(s) 77, 111
Fsp4HI GCNGC 1 cut(s) 158
GlaI GCGC 1 cut(s) 193
GluI GCNGC 1 cut(s) 158
HaeII RGCGCY 1 cut(s) 195
HhaI GCGC 1 cut(s) 194
Hin6I GCGC 1 cut(s) 192
HinP1I GCGC 1 cut(s) 192
HpyCH4IV ACGT 1 cut(s) 105
HpyCH4V TGCA 3 cut(s) 11, 134, 149
HpySE526I ACGT 1 cut(s) 105
HspAI GCGC 1 cut(s) 192
Kzo9I GATC 1 cut(s) 151
LmnI GCTCC 1 cut(s) 35
LpnPI CCDG 3 cut(s) 18, 68, 137
Lsp1109I GCAGC 1 cut(s) 169
LweI GCATC 1 cut(s) 55
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 1 cut(s) 126
MalI GATC 1 cut(s) 153
MboI GATC 1 cut(s) 151
MflI RGATCY 1 cut(s) 151
MluCI AATT 1 cut(s) 40
MnlI CCTC 2 cut(s) 22, 52
MseI TTAA 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 160
NdeII GATC 1 cut(s) 151
PkrI GCNGC 1 cut(s) 159
PsuI RGATCY 1 cut(s) 151
SaqAI TTAA 1 cut(s) 174
SatI GCNGC 1 cut(s) 158
Sau3AI GATC 1 cut(s) 151
SetI ASST 3 cut(s) 40, 63, 108
SfaNI GCATC 1 cut(s) 55
SgeI CNNG 7 cut(s) 45, 70, 95, 104, 136, 143, 173
Sse9I AATT 1 cut(s) 40
SsiI CCGC 2 cut(s) 155, 160
TaiI ACGT 1 cut(s) 108
TasI AATT 1 cut(s) 40
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TseI GCWGC 1 cut(s) 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.