Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002971.1

Orthogroup ID

OG0008421

Physical Location & Seq

Genomic Coordinates Reverse (-)

30208 .. 33483

Gene Structure 3276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002971.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2964 bp

atgagcttcagtgctttctacgtggatgttataacattcgagctgaagatggcgaagagacctcgaagcactagtctcatatgttgcatgttgatcatcatgttcttaatcttcccaaatcatatctgtgctttggatggttatgatgacgctgaagttcagcttctcttgtccttcaaagcttccatcttcgacgacccttcacactccctctcaagctggagcaactccacccccaacaatctctgcaactggcacggcgttacatgcatcggtgatgttaactcgtcgcacgtcaacgtcaacgtcatcgacctctctggaagaaacatctctggcagattatcatcctcactctttcacttgtcccacgtcgaaaaaatcgacctctccaacaatcagctacatggccaacttccccgtgacatattcaccagctcaaattctctccgacatctcaatctcagcaacaacaacttgaccggtcgaatcccacatggttcacttccgggtctggagacactagacttatgtaacaacatgatttcggggaaaatccccgaaaacattggtttgttctcgagattaaagtttcttgatcttggtggtaatgtgttagctggagaaattccaaattccatgtcaaatatgtctaacttggagtacttgactttggcttcaaaccaactaattggcaaacttccaagccaattaggccaagtcaagagcttaaagttgatatacttgggctacaacaatctctccggcgaaatcccacaagagattggtaagcttactgctttgaatcatctcgatctcgttttcaacaatctcaccggccaaatcccagactctctaggaaaccttaccgagctccgatatctcttcctctacggaaacaagctcacaggtccgcttcctaaatccatttttggtcttcaaaagcttgtctcacttgatcttagtgagaattctctttcgggtgagattcctgagctttttagtcagctacaacaacttgagattcttcatcttttcgcaaacaactttaccggaaagattccgaaatcccttgcttctctgtctcggctgcaagtccttcagctgtggtcgaacaagttctcaggggagattccgagtgatcttggaaagcaaagcaatctcactgttgtagacttatcaacaaactacctcaccggaaaagtacctgatacgatatgccactcggggaaccttttcaagctcatcctcttttccaattctcttgaaggtgaaatcacaaagagtctggcttcttgcaagagcttaggccgagttcgagttcaaaacaaccggctctccggtgaaatatcggctgaatttgtaaagcttccgcttgtgtatttcttggatatctcaggcaataatttttccggaagaattgatgacaaaaagtgggacctgccttcacttcaaatgctgaatatcgcgagaaacagacttttcggcaacttaccagagtctttcggcagcgacgagctcgagaacttggacttgtctgaaaatcatttatcgggaaatatctccctgaatttcgggaacttatcggagctgatgcagttaaagctttctcacaataagctctctggtcccatccctcaacaattgtcttcatgtaaaaagctcgtgggcctagacctcagccgcaaccagctcagcggcccaattccggtcagcctttctgagatgccagttctcggtcagcttgatttgtcctacaaccaactttccggcgaaattccaaggaacctaggcgtgattgaatcgcttgttcaagtgaatatttctcacaaccaccttcatggaaacttgccgtccaccggagcctttcttgctataaatgcgagctcggtggccggaaatcacctttgtggcggcgacaccacgagtggtttgccaccatgcaagagcaaaagcgtaagaaacaaccccacgtggtggtttattctcacttgctttctcgttgctttagctgcttttggtgttgctggttttgtcatcgtatacattcggagacgaaaggatttggagctaaaaaccgtggagaatgaagatggaatttggaaaatgcaattctttgagcccaaagtttcaagatcggtttcaattgaagatattttatcagcagcaaaacaaggtaatatcattgcaattggcaacaaaggtgcacaatttgttgtaaaagatgatgctgtgaattcaatttcaccaacattttggtctaaaatggtggaatttggaaaccttcggcaccccaacattatccggttgatcggaatatgtcgttcagaaaagaatgcatatgtcatccacgaatattgcgaagggaaagcattgtgtcaaattctgcggaagataaactgggaacaacgacggaagattgccgttgggattgcaagagctctacggttcttgcatgtttcttgctctccgagtgttgtcatcggttgtgtgtctcccgagaaagtaattgttgacgcaaaaaatgagcctcgtcttcagttgagtctccctgagtttagggactccaagggttttgcttcttctgcatacgtttctccagaagctaaaaacagcaaagacatcactgagaaaagtgatatctatggttttggtctagtcctcatcgaattactgaccgggaaaaaccccgacgatatagagttgggcgcacacgagagcatcgttgagtgggctcggtattgctactcggattgccatcttgatgcgtggaccgacccgatgatccgaggacacgtgtttaagaatcagaatgaaattgttgaaactatgaacctagcccttcactgtactgctggtgaccccacggctagaccatgcgcaaatgaactatacaaaaccctagactctataacgaagacaagttcttgtgttgcagtaaacttagtttcttcacctttttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

987

Amino Acids

108.72

Weight (kDa)

6.69

Isoelectric Point (pI)

38.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25790
fragaria_vesca	FvH4_2g35370 FvH4_2g35370 FvH4_2g35370
malus_domestica	MD08G1112700.v1.1 MD15G1092100.v1.1
prunus_persica	Prupe.1G447000_v2.0.a1 Prupe.1G447000_v2.0.a1 Prupe.1G447000_v2.0.a1
pyrus_communis	pycom08g09350 pycom15g08560
rosa_chinensis	RchiOBHm_Chr6g0306541
rosa_laevigata	RLG00000010787
rosa_multiflora	Rmu_sc0002971.1_g000005
rosa_roxburghii	Rroxscaffold_7G00161690
rosa_rugosa	Rorug06G0350200 Rorug06G0350300 Rorug06G0350400
rosa_samantha	Rh6AG462500 Rh6BG438200 Rh6CG476700 Rh6DG463400
rosa_wichuraiana	Rw6G040310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	32
Acc16I	TGCGCA	1 cut(s)	2881
Acc36I	ACCTGC	1 cut(s)	1449
AccB1I	GGYRCC	1 cut(s)	2289
AccB7I	CCANNNNNTGG	1 cut(s)	1977
AccI	GTMKAC	2 cut(s)	1173, 2043
AccII	CGCG	1 cut(s)	1469
AccIII	TCCGGA	1 cut(s)	1412
AciI	CCGC	6 cut(s)	914, 1373, 1684, 1698, 1914, 2389
AclWI	GGATC	1 cut(s)	2779
AcoI	YGGCCR	3 cut(s)	409, 838, 1893
AcuI	CTGAAG	4 cut(s)	65, 174, 1085, 2522
AcvI	CACGTG	2 cut(s)	1974, 2797
AdeI	CACNNNGTG	1 cut(s)	1977
AfaI	GTAC	3 cut(s)	665, 1206, 2851
AfiI	CCNNNNNNNGG	4 cut(s)	1708, 1736, 1859, 1977
AflIII	ACRYGT	2 cut(s)	2794, 2796
AgeI	ACCGGT	1 cut(s)	482
AhlI	ACTAGT	1 cut(s)	71
AjiI	CACGTC	2 cut(s)	295, 373
AleI	CACNNNNGTG	1 cut(s)	1908
Alw21I	GWGCWC	5 cut(s)	876, 1521, 1889, 2209, 2443
Alw26I	GTCTC	8 cut(s)	52, 80, 512, 955, 1089, 2047, 2499, 2552
Alw44I	GTGCAC	1 cut(s)	2205
AlwI	GGATC	1 cut(s)	2779
Ama87I	CYCGRG	4 cut(s)	580, 1225, 1520, 2498
Aor13HI	TCCGGA	1 cut(s)	1412
AoxI	GGCC	7 cut(s)	409, 715, 838, 1309, 1669, 1699, 1893
ApaLI	GTGCAC	1 cut(s)	2205
ApeKI	GCWGC	4 cut(s)	1090, 1509, 2012, 2165
ArsI	GACNNNNNNTTYG	4 cut(s)	58, 90, 626, 658
AsiGI	ACCGGT	1 cut(s)	482
Asp700I	GAANNNNTTC	2 cut(s)	1118, 1235
AspA2I	CCTAGG	1 cut(s)	1789
AspLEI	GCGC	2 cut(s)	2711, 2882
AspS9I	GGNCC	6 cut(s)	911, 1438, 1628, 1669, 1700, 2772
AsuC2I	CCSGG	2 cut(s)	510, 2680
AvaI	CYCGRG	4 cut(s)	580, 1225, 1520, 2498
AvaII	GGWCC	4 cut(s)	911, 1438, 1628, 2772
AvrII	CCTAGG	1 cut(s)	1789
BaeGI	GKGCMC	1 cut(s)	2209
BalI	TGGCCA	1 cut(s)	411
BanI	GGYRCC	1 cut(s)	2289
BanII	GRGCYC	6 cut(s)	876, 1521, 1889, 2124, 2443, 2737
BauI	CACGAG	3 cut(s)	1664, 1924, 2714
BbrPI	CACGTG	2 cut(s)	1974, 2797
BbsI	GAAGAC	4 cut(s)	929, 1641, 2528, 2924
Bbv12I	GWGCWC	5 cut(s)	876, 1521, 1889, 2209, 2443
BbvCI	CCTCAGC	1 cut(s)	1679
BbvI	GCAGC	4 cut(s)	1077, 1521, 1999, 2177
BccI	CCATC	6 cut(s)	43, 131, 194, 1640, 2087, 2766
BceAI	ACGGC	4 cut(s)	274, 1837, 2408, 2883
BcgI	CGANNNNNNTGC	2 cut(s)	1915, 1949
BclI	TGATCA	1 cut(s)	93
BcnI	CCSGG	2 cut(s)	510, 2680
BcoDI	GTCTC	8 cut(s)	52, 80, 512, 955, 1089, 2047, 2499, 2552
BcuI	ACTAGT	1 cut(s)	71
BfaI	CTAG	9 cut(s)	72, 524, 857, 1673, 1790, 2657, 2837, 2871, 2903
BfuAI	ACCTGC	1 cut(s)	1449
BglI	GCCNNNNNGGC	1 cut(s)	714
BisI	GCNGC	7 cut(s)	1091, 1510, 1684, 1699, 1915, 2013, 2166
BlnI	CCTAGG	1 cut(s)	1789
BlpI	GCTNAGC	1 cut(s)	1694
BlsI	GCNGC	7 cut(s)	1092, 1511, 1685, 1700, 1916, 2014, 2167
BmcAI	AGTACT	1 cut(s)	665
Bme1390I	CCNGG	2 cut(s)	510, 2680
Bme18I	GGWCC	4 cut(s)	911, 1438, 1628, 2772
BmeT110I	CYCGRG	4 cut(s)	580, 1225, 1520, 2498
BmgBI	CACGTC	2 cut(s)	295, 373
BmgT120I	GGNCC	6 cut(s)	911, 1438, 1628, 1669, 1700, 2772
BmiI	GGNNCC	6 cut(s)	1232, 1439, 1630, 1787, 1864, 2291
BmrFI	CCNGG	2 cut(s)	510, 2680
BmrI	ACTGGG	1 cut(s)	2410
BmsI	GCATC	6 cut(s)	279, 1584, 1716, 2218, 2730, 2755
BmuI	ACTGGG	1 cut(s)	2410
BpiI	GAAGAC	4 cut(s)	929, 1641, 2528, 2924
BpmI	CTGGAG	4 cut(s)	241, 536, 642, 2583
Bpu10I	CCTNAGC	3 cut(s)	993, 1306, 1679
Bpu1102I	GCTNAGC	1 cut(s)	1694
BpuEI	CTTGAG	2 cut(s)	199, 1040
BpuMI	CCSGG	2 cut(s)	510, 2680
BsaAI	YACGTR	3 cut(s)	22, 1974, 2797
BsaBI	GATNNNNATC	2 cut(s)	346, 2757
BsaI	GGTCTC	1 cut(s)	52
BsaJI	CCNNGG	6 cut(s)	1781, 1789, 2079, 2568, 2788, 2865
BsaWI	WCCGGW	8 cut(s)	482, 1052, 1196, 1340, 1412, 1708, 1859, 2304
BsaXI	ACNNNNNCTCC	4 cut(s)	746, 776, 1322, 1352
Bsc4I	CCNNNNNNNGG	4 cut(s)	1708, 1736, 1859, 1977
Bse118I	RCCGGY	3 cut(s)	482, 836, 1332
Bse1I	ACTGG	3 cut(s)	257, 1730, 2405
Bse3DI	GCAATG	1 cut(s)	2184
Bse8I	GATNNNNATC	2 cut(s)	346, 2757
BseAI	TCCGGA	1 cut(s)	1412
BseDI	CCNNGG	6 cut(s)	1781, 1789, 2079, 2568, 2788, 2865
BseGI	GGATG	6 cut(s)	31, 142, 347, 1245, 1632, 2346
BseJI	GATNNNNATC	2 cut(s)	346, 2757
BseLI	CCNNNNNNNGG	4 cut(s)	1708, 1736, 1859, 1977
BseMI	GCAATG	1 cut(s)	2184
BseMII	CTCAG	9 cut(s)	478, 984, 1137, 1410, 1693, 1708, 1713, 2544, 2619
BseNI	ACTGG	3 cut(s)	257, 1730, 2405
BseSI	GKGCMC	1 cut(s)	2209
BseXI	GCAGC	4 cut(s)	1077, 1521, 1999, 2177
Bsh1236I	CGCG	1 cut(s)	1469
Bsh1285I	CGRYCG	1 cut(s)	487
BshFI	GGCC	7 cut(s)	411, 717, 840, 1311, 1671, 1701, 1895
BshNI	GGYRCC	1 cut(s)	2289
BshTI	ACCGGT	1 cut(s)	482
BsiEI	CGRYCG	1 cut(s)	487
BsiHKAI	GWGCWC	5 cut(s)	876, 1521, 1889, 2209, 2443
BsiHKCI	CYCGRG	4 cut(s)	580, 1225, 1520, 2498
BslFI	GGGAC	4 cut(s)	352, 1451, 1614, 2576
BslI	CCNNNNNNNGG	4 cut(s)	1708, 1736, 1859, 1977
BsmAI	GTCTC	8 cut(s)	52, 80, 512, 955, 1089, 2047, 2499, 2552
BsmBI	CGTCTC	1 cut(s)	2047
BsmFI	GGGAC	4 cut(s)	352, 1451, 1614, 2576
BsmI	GAATGC	1 cut(s)	2341
BsnI	GGCC	7 cut(s)	411, 717, 840, 1311, 1671, 1701, 1895
Bso31I	GGTCTC	1 cut(s)	52
BsoBI	CYCGRG	4 cut(s)	580, 1225, 1520, 2498
Bsp1286I	GDGCHC	7 cut(s)	876, 1521, 1889, 2124, 2209, 2443, 2737
Bsp13I	TCCGGA	1 cut(s)	1412
Bsp143I	GATC	8 cut(s)	93, 598, 814, 958, 1141, 2135, 2310, 2784
Bsp1720I	GCTNAGC	1 cut(s)	1694
Bsp68I	TCGCGA	1 cut(s)	1469
BspACI	CCGC	6 cut(s)	914, 1373, 1684, 1698, 1914, 2389
BspANI	GGCC	7 cut(s)	411, 717, 840, 1311, 1671, 1701, 1895
BspCNI	CTCAG	9 cut(s)	477, 985, 1136, 1409, 1692, 1707, 1714, 2545, 2620
BspEI	TCCGGA	1 cut(s)	1412
BspFNI	CGCG	1 cut(s)	1469
BspLI	GGNNCC	6 cut(s)	1232, 1439, 1630, 1787, 1864, 2291
BspMI	ACCTGC	1 cut(s)	1449
BspPI	GGATC	1 cut(s)	2779
BspT107I	GGYRCC	1 cut(s)	2289
BspTNI	GGTCTC	1 cut(s)	52
BsrDI	GCAATG	1 cut(s)	2184
BsrFI	RCCGGY	3 cut(s)	482, 836, 1332
BsrI	ACTGG	3 cut(s)	257, 1730, 2405
BssAI	RCCGGY	3 cut(s)	482, 836, 1332
BssECI	CCNNGG	6 cut(s)	1781, 1789, 2079, 2568, 2788, 2865
BssMI	GATC	8 cut(s)	93, 598, 814, 958, 1141, 2135, 2310, 2784
BssNAI	GTATAC	1 cut(s)	2044
BssSI	CACGAG	3 cut(s)	1664, 1924, 2714
BssT1I	CCWWGG	3 cut(s)	1781, 1789, 2568
Bst1107I	GTATAC	1 cut(s)	2044
Bst2BI	CACGAG	3 cut(s)	1664, 1924, 2714
Bst4CI	ACNGT	4 cut(s)	1168, 2080, 2448, 2849
Bst6I	CTCTTC	2 cut(s)	50, 890
BstBAI	YACGTR	3 cut(s)	22, 1974, 2797
BstC8I	GCNNGC	1 cut(s)	1885
BstDSI	CCRYGG	2 cut(s)	2079, 2865
BstEII	GGTNACC	1 cut(s)	2858
BstF5I	GGATG	6 cut(s)	31, 142, 347, 1245, 1632, 2346
BstFNI	CGCG	1 cut(s)	1469
BstHHI	GCGC	2 cut(s)	2711, 2882
BstKTI	GATC	8 cut(s)	96, 601, 817, 961, 1144, 2138, 2313, 2787
BstMAI	GTCTC	8 cut(s)	52, 80, 512, 955, 1089, 2047, 2499, 2552
BstMBI	GATC	8 cut(s)	93, 598, 814, 958, 1141, 2135, 2310, 2784
BstMCI	CGRYCG	1 cut(s)	487
BstMWI	GCNNNNNNNGC	7 cut(s)	267, 714, 1603, 1871, 1880, 2012, 2585
BstNSI	RCATGY	3 cut(s)	91, 270, 2459
BstPI	GGTNACC	1 cut(s)	2858
BstSCI	CCNGG	2 cut(s)	508, 2678
BstSLI	GKGCMC	1 cut(s)	2209
BstUI	CGCG	1 cut(s)	1469
BstV1I	GCAGC	4 cut(s)	1077, 1521, 1999, 2177
BstV2I	GAAGAC	4 cut(s)	929, 1641, 2528, 2924
BstXI	CCANNNNNNTGG	3 cut(s)	692, 1841, 2256
BstZ17I	GTATAC	1 cut(s)	2044
BsuRI	GGCC	7 cut(s)	411, 717, 840, 1311, 1671, 1701, 1895
BtgI	CCRYGG	2 cut(s)	2079, 2865
BtrI	CACGTC	2 cut(s)	295, 373
BtsCI	GGATG	6 cut(s)	31, 142, 347, 1245, 1632, 2346
BtsIMutI	CAGTG	4 cut(s)	16, 1164, 2625, 2845
BtuMI	TCGCGA	1 cut(s)	1469
BveI	ACCTGC	1 cut(s)	1449
Cac8I	GCNNGC	1 cut(s)	1885
CfoI	GCGC	2 cut(s)	2711, 2882
Cfr10I	RCCGGY	3 cut(s)	482, 836, 1332
Cfr13I	GGNCC	6 cut(s)	911, 1438, 1628, 1669, 1700, 2772
CseI	GACGC	2 cut(s)	158, 2525
Csp6I	GTAC	3 cut(s)	664, 1205, 2850
CspAI	ACCGGT	1 cut(s)	482
CspCI	CAANNNNNGTGG	2 cut(s)	2339, 2374
CviQI	GTAC	3 cut(s)	664, 1205, 2850
DpnI	GATC	8 cut(s)	95, 600, 816, 960, 1143, 2137, 2312, 2786
DpnII	GATC	8 cut(s)	93, 598, 814, 958, 1141, 2135, 2310, 2784
DraIII	CACNNNGTG	1 cut(s)	1977
EaeI	YGGCCR	3 cut(s)	409, 838, 1893
Eam1104I	CTCTTC	2 cut(s)	50, 890
EarI	CTCTTC	2 cut(s)	50, 890
Ecl136II	GAGCTC	4 cut(s)	874, 1519, 1887, 2441
Eco130I	CCWWGG	3 cut(s)	1781, 1789, 2568
Eco24I	GRGCYC	6 cut(s)	876, 1521, 1889, 2124, 2443, 2737
Eco31I	GGTCTC	1 cut(s)	52
Eco32I	GATATC	3 cut(s)	881, 1393, 2641
Eco47I	GGWCC	4 cut(s)	911, 1438, 1628, 2772
Eco53kI	GAGCTC	4 cut(s)	874, 1519, 1887, 2441
Eco57I	CTGAAG	4 cut(s)	65, 174, 1085, 2522
Eco72I	CACGTG	2 cut(s)	1974, 2797
Eco88I	CYCGRG	4 cut(s)	580, 1225, 1520, 2498
Eco91I	GGTNACC	1 cut(s)	2858
EcoICRI	GAGCTC	4 cut(s)	874, 1519, 1887, 2441
EcoO109I	RGGNCCY	1 cut(s)	1438
EcoO65I	GGTNACC	1 cut(s)	2858
EcoRI	GAATTC	2 cut(s)	970, 2236
EcoRV	GATATC	3 cut(s)	881, 1393, 2641
EcoT14I	CCWWGG	3 cut(s)	1781, 1789, 2568
EcoT22I	ATGCAT	2 cut(s)	272, 2341
EcoT38I	GRGCYC	6 cut(s)	876, 1521, 1889, 2124, 2443, 2737
ErhI	CCWWGG	3 cut(s)	1781, 1789, 2568
Esp3I	CGTCTC	1 cut(s)	2047
FalI	AAGNNNNNCTT	2 cut(s)	147, 179
FaqI	GGGAC	4 cut(s)	352, 1451, 1614, 2576
FauNDI	CATATG	2 cut(s)	80, 2341
FbaI	TGATCA	1 cut(s)	93
FblI	GTMKAC	2 cut(s)	1173, 2043
Fnu4HI	GCNGC	7 cut(s)	1091, 1510, 1684, 1699, 1915, 2013, 2166
FokI	GGATG	6 cut(s)	38, 149, 334, 1232, 1619, 2333
FriOI	GRGCYC	6 cut(s)	876, 1521, 1889, 2124, 2443, 2737
Fsp4HI	GCNGC	7 cut(s)	1091, 1510, 1684, 1699, 1915, 2013, 2166
FspBI	CTAG	9 cut(s)	72, 524, 857, 1673, 1790, 2657, 2837, 2871, 2903
FspI	TGCGCA	1 cut(s)	2881
GlaI	GCGC	2 cut(s)	2710, 2881
GluI	GCNGC	7 cut(s)	1091, 1510, 1684, 1699, 1915, 2013, 2166
GsuI	CTGGAG	4 cut(s)	241, 536, 642, 2583
HaeIII	GGCC	7 cut(s)	411, 717, 840, 1311, 1671, 1701, 1895
HgaI	GACGC	2 cut(s)	158, 2525
HhaI	GCGC	2 cut(s)	2711, 2882
Hin6I	GCGC	2 cut(s)	2709, 2880
HinP1I	GCGC	2 cut(s)	2709, 2880
HincII	GTYRAC	4 cut(s)	283, 298, 304, 2515
HindII	GTYRAC	4 cut(s)	283, 298, 304, 2515
HindIII	AAGCTT	5 cut(s)	180, 791, 944, 1367, 1604
HpaI	GTTAAC	1 cut(s)	283
Hpy99I	CGWCG	6 cut(s)	197, 292, 377, 1517, 2415, 2696
HpyAV	CCTTC	9 cut(s)	184, 210, 1109, 1262, 1455, 1847, 2294, 2357, 2852
HpyCH4III	ACNGT	4 cut(s)	1168, 2080, 2448, 2849
HpyCH4IV	ACGT	8 cut(s)	21, 294, 300, 306, 372, 1973, 2592, 2796
HpyF10VI	GCNNNNNNNGC	7 cut(s)	267, 714, 1603, 1871, 1880, 2012, 2585
HpySE526I	ACGT	8 cut(s)	21, 294, 300, 306, 372, 1973, 2592, 2796
HspAI	GCGC	2 cut(s)	2709, 2880
Kpn2I	TCCGGA	1 cut(s)	1412
Ksp22I	TGATCA	1 cut(s)	93
KspAI	GTTAAC	1 cut(s)	283
Kzo9I	GATC	8 cut(s)	93, 598, 814, 958, 1141, 2135, 2310, 2784
LmnI	GCTCC	5 cut(s)	222, 879, 1588, 1862, 2068
Lsp1109I	GCAGC	4 cut(s)	1077, 1521, 1999, 2177
LweI	GCATC	6 cut(s)	279, 1584, 1716, 2218, 2730, 2755
MaeI	CTAG	9 cut(s)	72, 524, 857, 1673, 1790, 2657, 2837, 2871, 2903
MaeII	ACGT	8 cut(s)	21, 294, 300, 306, 372, 1973, 2592, 2796
MaeIII	GTNAC	4 cut(s)	262, 422, 533, 2858
MalI	GATC	8 cut(s)	95, 600, 816, 960, 1143, 2137, 2312, 2786
MboI	GATC	8 cut(s)	93, 598, 814, 958, 1141, 2135, 2310, 2784
MfeI	CAATTG	3 cut(s)	1643, 2145, 2190
MhlI	GDGCHC	7 cut(s)	876, 1521, 1889, 2124, 2209, 2443, 2737
MlsI	TGGCCA	1 cut(s)	411
MluNI	TGGCCA	1 cut(s)	411
MlyI	GAGTC	6 cut(s)	845, 1294, 1508, 2554, 2558, 2900
MmeI	TCCRAC	2 cut(s)	417, 475
Mox20I	TGGCCA	1 cut(s)	411
Mph1103I	ATGCAT	2 cut(s)	272, 2341
MroI	TCCGGA	1 cut(s)	1412
MroXI	GAANNNNTTC	2 cut(s)	1118, 1235
MscI	TGGCCA	1 cut(s)	411
MseI	TTAA	6 cut(s)	107, 282, 587, 731, 1601, 2802
MslI	CAYNNNNRTG	4 cut(s)	126, 1839, 1908, 2763
Msp20I	TGGCCA	1 cut(s)	411
MspA1I	CMGCKG	2 cut(s)	1105, 1698
MspR9I	CCNGG	2 cut(s)	510, 2680
MunI	CAATTG	3 cut(s)	1643, 2145, 2190
Mva1269I	GAATGC	1 cut(s)	2341
MvnI	CGCG	1 cut(s)	1469
MwoI	GCNNNNNNNGC	7 cut(s)	267, 714, 1603, 1871, 1880, 2012, 2585
NciI	CCSGG	2 cut(s)	510, 2680
NdeI	CATATG	2 cut(s)	80, 2341
NdeII	GATC	8 cut(s)	93, 598, 814, 958, 1141, 2135, 2310, 2784
NlaIV	GGNNCC	6 cut(s)	1232, 1439, 1630, 1787, 1864, 2291
NmeAIII	GCCGAG	2 cut(s)	1066, 1337
NmuCI	GTSAC	2 cut(s)	422, 2858
NruI	TCGCGA	1 cut(s)	1469
NsbI	TGCGCA	1 cut(s)	2881
NsiI	ATGCAT	2 cut(s)	272, 2341
NspI	RCATGY	3 cut(s)	91, 270, 2459
OliI	CACNNNNGTG	1 cut(s)	1908
PaeR7I	CTCGAG	2 cut(s)	580, 1520
PcsI	WCGNNNNNNNCGW	4 cut(s)	381, 1512, 2358, 2721
PctI	GAATGC	1 cut(s)	2341
PdmI	GAANNNNTTC	2 cut(s)	1118, 1235
PfeI	GAWTC	8 cut(s)	489, 805, 988, 1024, 1060, 1132, 1802, 2806
PflMI	CCANNNNNTGG	1 cut(s)	1977
PinAI	ACCGGT	1 cut(s)	482
PkrI	GCNGC	7 cut(s)	1092, 1511, 1685, 1700, 1916, 2014, 2167
PleI	GAGTC	6 cut(s)	845, 1293, 1507, 2553, 2558, 2900
PmaCI	CACGTG	2 cut(s)	1974, 2797
PmlI	CACGTG	2 cut(s)	1974, 2797
PpsI	GAGTC	6 cut(s)	845, 1293, 1507, 2553, 2558, 2900
Ppu21I	YACGTR	3 cut(s)	22, 1974, 2797
PpuMI	RGGWCCY	1 cut(s)	1438
PsiI	TTATAA	1 cut(s)	32
Psp124BI	GAGCTC	4 cut(s)	876, 1521, 1889, 2443
Psp5II	RGGWCCY	1 cut(s)	1438
PspCI	CACGTG	2 cut(s)	1974, 2797
PspEI	GGTNACC	1 cut(s)	2858
PspN4I	GGNNCC	6 cut(s)	1232, 1439, 1630, 1787, 1864, 2291
PspPI	GGNCC	6 cut(s)	911, 1438, 1628, 1669, 1700, 2772
PspPPI	RGGWCCY	1 cut(s)	1438
PvuII	CAGCTG	1 cut(s)	1105
RruI	TCGCGA	1 cut(s)	1469
RsaI	GTAC	3 cut(s)	665, 1206, 2851
RsaNI	GTAC	3 cut(s)	664, 1205, 2850
RseI	CAYNNNNRTG	4 cut(s)	126, 1839, 1908, 2763
SacI	GAGCTC	4 cut(s)	876, 1521, 1889, 2443
SaqAI	TTAA	6 cut(s)	107, 282, 587, 731, 1601, 2802
SatI	GCNGC	7 cut(s)	1091, 1510, 1684, 1699, 1915, 2013, 2166
Sau3AI	GATC	8 cut(s)	93, 598, 814, 958, 1141, 2135, 2310, 2784
Sau96I	GGNCC	6 cut(s)	911, 1438, 1628, 1669, 1700, 2772
ScaI	AGTACT	1 cut(s)	665
SchI	GAGTC	6 cut(s)	845, 1294, 1508, 2554, 2558, 2900
ScrFI	CCNGG	2 cut(s)	510, 2680
SduI	GDGCHC	7 cut(s)	876, 1521, 1889, 2124, 2209, 2443, 2737
SfaNI	GCATC	6 cut(s)	279, 1584, 1716, 2218, 2730, 2755
Sfr274I	CTCGAG	2 cut(s)	580, 1520
SinI	GGWCC	4 cut(s)	911, 1438, 1628, 2772
SlaI	CTCGAG	2 cut(s)	580, 1520
SmiMI	CAYNNNNRTG	4 cut(s)	126, 1839, 1908, 2763
SmlI	CTYRAG	4 cut(s)	214, 580, 1019, 1520
SmoI	CTYRAG	4 cut(s)	214, 580, 1019, 1520
SpeI	ACTAGT	1 cut(s)	71
SsiI	CCGC	6 cut(s)	914, 1373, 1684, 1698, 1914, 2389
SspI	AATATT	2 cut(s)	1822, 2357
SspMI	CTAG	9 cut(s)	72, 524, 857, 1673, 1790, 2657, 2837, 2871, 2903
SstI	GAGCTC	4 cut(s)	876, 1521, 1889, 2443
StyD4I	CCNGG	2 cut(s)	508, 2678
StyI	CCWWGG	3 cut(s)	1781, 1789, 2568
TaaI	ACNGT	4 cut(s)	1168, 2080, 2448, 2849
TaiI	ACGT	8 cut(s)	24, 297, 303, 309, 375, 1976, 2595, 2799
TaqII	GACCGA	2 cut(s)	1727, 2789
TatI	WGTACW	2 cut(s)	663, 2849
TauI	GCSGC	3 cut(s)	1686, 1701, 1917
TfiI	GAWTC	8 cut(s)	489, 805, 988, 1024, 1060, 1132, 1802, 2806
Tru1I	TTAA	6 cut(s)	107, 282, 587, 731, 1601, 2802
Tru9I	TTAA	6 cut(s)	107, 282, 587, 731, 1601, 2802
TscAI	CASTG	4 cut(s)	16, 1171, 2632, 2852
TseFI	GTSAC	2 cut(s)	422, 2858
TseI	GCWGC	4 cut(s)	1090, 1509, 2012, 2165
Tsp45I	GTSAC	2 cut(s)	422, 2858
TspDTI	ATGAA	7 cut(s)	1019, 1641, 1829, 2103, 2829, 2846, 2901
TspGWI	ACGGA	2 cut(s)	909, 2428
TspRI	CASTG	4 cut(s)	16, 1171, 2632, 2852
Van91I	CCANNNNNTGG	1 cut(s)	1977
VneI	GTGCAC	1 cut(s)	2205
VpaK11BI	GGWCC	4 cut(s)	911, 1438, 1628, 2772
XceI	RCATGY	3 cut(s)	91, 270, 2459
XhoI	CTCGAG	2 cut(s)	580, 1520
XmaJI	CCTAGG	1 cut(s)	1789
XmiI	GTMKAC	2 cut(s)	1173, 2043
XmnI	GAANNNNTTC	2 cut(s)	1118, 1235
XspI	CTAG	9 cut(s)	72, 524, 857, 1673, 1790, 2657, 2837, 2871, 2903
ZrmI	AGTACT	1 cut(s)	665
Zsp2I	ATGCAT	2 cut(s)	272, 2341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.