Rroxscaffold_7G00161690
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0008421
Physical Location & Seq
Reverse (-)
4393713 .. 4397380
3668 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00161690.1

Sequence Viewer

Length: 2964 bp
ATGAGCTTCAGTGCTTTCTACGTGGATGTTATAACATTTGAGCTGAAGATGGCGAAGAGACCTCGAAGCACTAGTCTCATATCTTGCATGTTGATCATCATGTTCTTAATCTTCCCAAATCATATCTGTGCTTTGGATGGTTATGATGACGCTGAAGTTCAGCTTCTCTTGTCCTTCAAAGCTTCCATCTTCGACGACCCTTCACACTCCCTCTCAAGCTGGAGCAACTCCACCGCCAACAATCTCTGCAACTGGCACGGCGTTACATGCATCGGTGATGTTAACTCGTCGCACGTCAACGTCAACGTCATCGACCTCTCCGGAAGAAACATCTCTGGCAGATTATCATCCTCACTCTTTCACTTGTCCCACGTCGAAAAAATCGACCTCTCCAACAATCAGCTACATGGCCAACTTCCCCGTGACATATTCACCAGCTCAAATTCTCTCCGACATCTCAATCTCAGCAACAACAACTTGACTGGTCAAATCCCACATGGTTCACTTCCGGGTCTGGAGACACTAGACTTATGTAACAACATGATTTCGGGGAAAATCCCCGAAAACATTGGTTTGTTCTCGAGATTAAAGTTTCTTGATCTTGGTGGTAATGTGTTAGCGGGAGAAATTCCAAATTCCATGTCAAATATGTCTAACTTGGAGTACTTGACTTTGGCTTCAAACCAACTAATTGGCAAAGTTCCAAGCCAATTAGGCCAAGTCAAGAGCTTAAAGTTGATATACTTGGGCTACAACAATCTCTCCGGCGAAATCCCACAAGAGATTGGTAAGCTTACTGCTTTGAATCATCTCGATCTCGTTTTCAACAATCTCACCGGCCAAATCCCGGACTCTCTAGGAAACCTTACCGAGCTCCGATATCTCTTCCTCTACGGAAACAAGCTCACAGGTCCGCTTCCAAAATCCATTTTTGGTCTTCAAAAGCTTGTCTCACTTGATCTTAGTGAGAATTCTCTTTCGGGTGAGATTCCTGAACTTTTTAGTCAGCTACAACAACTTGAGATTCTTCATCTTTTCGCAAACAACTTTGCCGGAAAGATTCCGAAATCCCTTGCTTCTCTGTCTCGGCTGCAAGTCCTTCAGCTGTGGTCGAACAAGTTCTCAGGGGAGATTCCGGGTGATCTTGGAAAGCAAAGCAATCTCACTGTTGTAGACTTATCTACAAACTACCTCACCGGAAAAGTACCTGATACGATATGCCACTCGGGGAACCTTTTCAAGCTCATCCTCTTTTCCAATTCTCTTGAAGGTGAAATCACAAAAAGTCTGGCTTCTTGCAAGAGCTTAGGCCGAGTTCGAGTTCAAAACAACCGGCTCTCCGGTGAGATATCGGCCGAATTTGTAAAGCTTCCGCTTGTGTATTTCTTGGACATCTCGGGCAATAATTTTTCCGGAAGAATTGATGACAAAAAGTGGGACCTGCCTTCACTTCAAATGCTGAATATCGCGAGAAACAGACTTTTCGGCAACTTACCGGAGTCTTTTGGCAGCAACGAGCTCGAGAACTTGGACTTGTCTGAAAATCATTTATCGGGAAATATCTCCCTGAATTTCGGGAACTTATCGGAGCTGATGCAGTTAAAGCTTTCTCACAATAAGCTCTCTGGTCCCATCCCTCAACAATTGTCTTCATGTAAAAAGCTCGTGGGCCTAGACCTCAGCCGCAACCAGCTCAGCGGCCCAATTCCAGTCAGCCTTTCTGAGATGCCAGTTCTCGGTCAGCTTGATTTGTCCTACAACCAACTTAGGGGTGAAATTCCACGGAACCTAGGCGTGATTGAATCGCTTGTTCAAGTGAATATTTCTCACAACCACCTTCATGGAAACTTGCCGTCCACCGGAGCCTTTCTTGCTATAAATGCTAGCTCGGTGGCCGGAAATGACCTTTGTGGCGGCGACACCACGAGTGGTTTGCCACCATGCAAGAGCAAAAGCGTAAGAAACAATCCCACGTGGTGGTTTATTCTCACTTGCTTTCTCGTTGCTTTAGCTGCTTTTGGTGTTGCTGGTTTTGTCATTGTATGCATTCGGAGACGAAAGGATTTGGAGCTAAAAACCGTGGAGAATGAAGATGGAATTTGGAAAATGCAATTCTTTGAGCCCAAAGTTTCAAGATCGGTTTCAATTGAAGATATTTTATCAGCAGCAAAACAAGGTAATATCATTGCAATTGGCAACAAAGGTGCACAATTTGTTGTAAAAGATGATGCTGTGAATTCAATTTCACCAACATTTTGGTCTAAAATGGTGGAATTTGGAAACCTTCGGCACCCCAACATTATCCGGTTGATCGGAATATGTCGTTCAGAAAAGAATGCATATGTCATCCACGAATATTGCGAAGGGAAAGCGTTGTGTCAAATTCTGCGGAAGATAAGCTGGGAACAACGACGGAAGATTGCCGTTGGGATTGCAAGAGCTCTACGGTTCTTGCATGTTTCTTGCTCTCCGAGTGTTGTCATCGGTTGTGTGTCTCCCGAGAAAGTAATTGTTGACGCAAAAAATGAGCCTCGTCTTCAGTTGAGCCTCCCTGAGTTTAGGGATTCCAAGGGTTTTGCTTCTTCTGCATACGTTTCTCCAGAAGCTAAAAACAGCAAAGACATCACTGAGAAAAGTGATATCTATGGTTTTGGTCTAGTCCTCATCGAATTACTGACCGGGAAAAGCCCCGACGACATAGAGTTGGGCGCACACGAGAGCATCGTTGAGTGGGCTCGGTATTGCTACTCGGATTGCCATCTTGATGCGTGGACCGACCCGATGATTCGAGGACACGTGTTCAAGAATCAGAATGAAATTGTTGAAACCATGAACCTAGCCCTTCACTGTACTGCTGGTGACCCCACGGCTAGACCATGCGCCAATGAACTATACAAAACCCTAGACTCTATAACGAAGACAAGTTCTTGTGTTGCAGTAAACTTAGTTTCTTCACCTTTTTGA

Protein Analysis

987

Amino Acids

108.51

Weight (kDa)

6.67

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 50 - 90 1.5e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 120 - 244 4.2e-07 Leucine-rich repeat region
LRR_4 PF12799 149 - 182 5e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 284 - 408 2.5e-14 Leucine-rich repeat region
LRR_8 PF13855 291 - 350 1.9e-07 Leucine rich repeat
LRR_8 PF13855 362 - 422 7.8e-06 Leucine rich repeat
LRR_8 PF13855 506 - 565 8.2e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 747 - 968 7.1e-17 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 759 - 965 9.5e-18 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 32
Acc36I ACCTGC 1 cut(s) 1449
AccB1I GGYRCC 1 cut(s) 2289
AccB7I CCANNNNNTGG 1 cut(s) 1977
AccI GTMKAC 1 cut(s) 1173
AccII CGCG 1 cut(s) 1469
AccIII TCCGGA 2 cut(s) 320, 1412
AciI CCGC 8 cut(s) 234, 620, 914, 1373, 1684, 1698, 1914, 2389
AcoI YGGCCR 4 cut(s) 409, 838, 1353, 1893
AcuI CTGAAG 4 cut(s) 65, 174, 1085, 2522
AcvI CACGTG 2 cut(s) 1974, 2797
AdeI CACNNNGTG 1 cut(s) 1977
AfaI GTAC 3 cut(s) 665, 1206, 2851
AfiI CCNNNNNNNGG 5 cut(s) 847, 1736, 1768, 1859, 1977
AflIII ACRYGT 2 cut(s) 2794, 2796
AhlI ACTAGT 1 cut(s) 71
AjiI CACGTC 2 cut(s) 295, 373
Alw21I GWGCWC 4 cut(s) 876, 1521, 2209, 2443
Alw26I GTCTC 7 cut(s) 52, 80, 512, 955, 1089, 2047, 2499
Alw44I GTGCAC 1 cut(s) 2205
Ama87I CYCGRG 5 cut(s) 580, 1225, 1396, 1520, 2498
Aor13HI TCCGGA 2 cut(s) 320, 1412
AoxI GGCC 8 cut(s) 409, 715, 838, 1309, 1353, 1669, 1699, 1893
ApaLI GTGCAC 1 cut(s) 2205
ApeKI GCWGC 4 cut(s) 1090, 1509, 2012, 2165
ArsI GACNNNNNNTTYG 4 cut(s) 58, 90, 626, 658
Asp700I GAANNNNTTC 2 cut(s) 1118, 1235
AspA2I CCTAGG 1 cut(s) 1789
AspLEI GCGC 2 cut(s) 2711, 2882
AspS9I GGNCC 6 cut(s) 911, 1438, 1628, 1669, 1700, 2772
AsuC2I CCSGG 4 cut(s) 510, 848, 1137, 2680
AsuNHI GCTAGC 1 cut(s) 1883
AvaI CYCGRG 5 cut(s) 580, 1225, 1396, 1520, 2498
AvaII GGWCC 4 cut(s) 911, 1438, 1628, 2772
AvrII CCTAGG 1 cut(s) 1789
BaeGI GKGCMC 1 cut(s) 2209
BalI TGGCCA 1 cut(s) 411
BanI GGYRCC 1 cut(s) 2289
BanII GRGCYC 5 cut(s) 876, 1521, 2124, 2443, 2737
BauI CACGAG 3 cut(s) 1664, 1924, 2714
BbrPI CACGTG 2 cut(s) 1974, 2797
BbsI GAAGAC 4 cut(s) 929, 1641, 2528, 2924
Bbv12I GWGCWC 4 cut(s) 876, 1521, 2209, 2443
BbvCI CCTCAGC 1 cut(s) 1679
BbvI GCAGC 4 cut(s) 1077, 1521, 1999, 2177
BccI CCATC 6 cut(s) 43, 131, 194, 1640, 2087, 2766
BceAI ACGGC 4 cut(s) 274, 1837, 2408, 2883
BcgI CGANNNNNNTGC 4 cut(s) 1501, 1535, 1915, 1949
BclI TGATCA 1 cut(s) 93
BcnI CCSGG 4 cut(s) 510, 848, 1137, 2680
BcoDI GTCTC 7 cut(s) 52, 80, 512, 955, 1089, 2047, 2499
BcuI ACTAGT 1 cut(s) 71
BfuAI ACCTGC 1 cut(s) 1449
BglI GCCNNNNNGGC 1 cut(s) 714
BisI GCNGC 7 cut(s) 1091, 1510, 1684, 1699, 1915, 2013, 2166
BlnI CCTAGG 1 cut(s) 1789
BlpI GCTNAGC 1 cut(s) 1694
BlsI GCNGC 7 cut(s) 1092, 1511, 1685, 1700, 1916, 2014, 2167
BmcAI AGTACT 1 cut(s) 665
Bme1390I CCNGG 4 cut(s) 510, 848, 1137, 2680
Bme18I GGWCC 4 cut(s) 911, 1438, 1628, 2772
BmeT110I CYCGRG 5 cut(s) 580, 1225, 1396, 1520, 2498
BmgBI CACGTC 2 cut(s) 295, 373
BmgT120I GGNCC 6 cut(s) 911, 1438, 1628, 1669, 1700, 2772
BmiI GGNNCC 6 cut(s) 1232, 1439, 1630, 1787, 1864, 2291
BmrFI CCNGG 4 cut(s) 510, 848, 1137, 2680
BmsI GCATC 6 cut(s) 279, 1584, 1716, 2218, 2730, 2755
BmtI GCTAGC 1 cut(s) 1887
BpiI GAAGAC 4 cut(s) 929, 1641, 2528, 2924
BpmI CTGGAG 3 cut(s) 241, 536, 2583
Bpu10I CCTNAGC 2 cut(s) 1306, 1679
Bpu1102I GCTNAGC 1 cut(s) 1694
BpuEI CTTGAG 2 cut(s) 199, 1040
BpuMI CCSGG 4 cut(s) 510, 848, 1137, 2680
BsaAI YACGTR 3 cut(s) 22, 1974, 2797
BsaBI GATNNNNATC 2 cut(s) 346, 2757
BsaI GGTCTC 1 cut(s) 52
BsaJI CCNNGG 5 cut(s) 1781, 1789, 2079, 2568, 2865
BsaWI WCCGGW 7 cut(s) 320, 1196, 1340, 1412, 1495, 1859, 2304
BsaXI ACNNNNNCTCC 4 cut(s) 746, 776, 1322, 1352
Bsc4I CCNNNNNNNGG 5 cut(s) 847, 1736, 1768, 1859, 1977
Bse118I RCCGGY 2 cut(s) 836, 1332
Bse1I ACTGG 4 cut(s) 257, 487, 1709, 1730
Bse3DI GCAATG 1 cut(s) 2184
Bse8I GATNNNNATC 2 cut(s) 346, 2757
BseAI TCCGGA 2 cut(s) 320, 1412
BseDI CCNNGG 5 cut(s) 1781, 1789, 2079, 2568, 2865
BseGI GGATG 6 cut(s) 31, 142, 347, 1245, 1632, 2346
BseJI GATNNNNATC 2 cut(s) 346, 2757
BseLI CCNNNNNNNGG 5 cut(s) 847, 1736, 1768, 1859, 1977
BseMI GCAATG 1 cut(s) 2184
BseMII CTCAG 7 cut(s) 478, 1137, 1693, 1708, 1713, 2544, 2619
BseNI ACTGG 4 cut(s) 257, 487, 1709, 1730
BseSI GKGCMC 1 cut(s) 2209
BseX3I CGGCCG 1 cut(s) 1353
BseXI GCAGC 4 cut(s) 1077, 1521, 1999, 2177
BseYI CCCAGC 1 cut(s) 2400
Bsh1236I CGCG 1 cut(s) 1469
Bsh1285I CGRYCG 1 cut(s) 1356
BshFI GGCC 8 cut(s) 411, 717, 840, 1311, 1355, 1671, 1701, 1895
BshNI GGYRCC 1 cut(s) 2289
BsiEI CGRYCG 1 cut(s) 1356
BsiHKAI GWGCWC 4 cut(s) 876, 1521, 2209, 2443
BsiHKCI CYCGRG 5 cut(s) 580, 1225, 1396, 1520, 2498
BslFI GGGAC 3 cut(s) 352, 1451, 1614
BslI CCNNNNNNNGG 5 cut(s) 847, 1736, 1768, 1859, 1977
BsmAI GTCTC 7 cut(s) 52, 80, 512, 955, 1089, 2047, 2499
BsmBI CGTCTC 1 cut(s) 2047
BsmFI GGGAC 3 cut(s) 352, 1451, 1614
BsmI GAATGC 2 cut(s) 2046, 2341
BsnI GGCC 8 cut(s) 411, 717, 840, 1311, 1355, 1671, 1701, 1895
Bso31I GGTCTC 1 cut(s) 52
BsoBI CYCGRG 5 cut(s) 580, 1225, 1396, 1520, 2498
Bsp1286I GDGCHC 6 cut(s) 876, 1521, 2124, 2209, 2443, 2737
Bsp13I TCCGGA 2 cut(s) 320, 1412
Bsp143I GATC 7 cut(s) 93, 598, 814, 958, 1141, 2135, 2310
Bsp1720I GCTNAGC 1 cut(s) 1694
Bsp68I TCGCGA 1 cut(s) 1469
BspACI CCGC 8 cut(s) 234, 620, 914, 1373, 1684, 1698, 1914, 2389
BspANI GGCC 8 cut(s) 411, 717, 840, 1311, 1355, 1671, 1701, 1895
BspCNI CTCAG 7 cut(s) 477, 1136, 1692, 1707, 1714, 2545, 2620
BspEI TCCGGA 2 cut(s) 320, 1412
BspFNI CGCG 1 cut(s) 1469
BspLI GGNNCC 6 cut(s) 1232, 1439, 1630, 1787, 1864, 2291
BspMI ACCTGC 1 cut(s) 1449
BspOI GCTAGC 1 cut(s) 1887
BspT107I GGYRCC 1 cut(s) 2289
BspTNI GGTCTC 1 cut(s) 52
BsrDI GCAATG 1 cut(s) 2184
BsrFI RCCGGY 2 cut(s) 836, 1332
BsrI ACTGG 4 cut(s) 257, 487, 1709, 1730
BssAI RCCGGY 2 cut(s) 836, 1332
BssECI CCNNGG 5 cut(s) 1781, 1789, 2079, 2568, 2865
BssMI GATC 7 cut(s) 93, 598, 814, 958, 1141, 2135, 2310
BssSI CACGAG 3 cut(s) 1664, 1924, 2714
BssT1I CCWWGG 2 cut(s) 1789, 2568
Bst2BI CACGAG 3 cut(s) 1664, 1924, 2714
Bst4CI ACNGT 4 cut(s) 1168, 2080, 2448, 2849
Bst6I CTCTTC 2 cut(s) 50, 890
BstBAI YACGTR 3 cut(s) 22, 1974, 2797
BstC8I GCNNGC 1 cut(s) 1885
BstDSI CCRYGG 3 cut(s) 1781, 2079, 2865
BstEII GGTNACC 1 cut(s) 2858
BstF5I GGATG 6 cut(s) 31, 142, 347, 1245, 1632, 2346
BstFNI CGCG 1 cut(s) 1469
BstHHI GCGC 2 cut(s) 2711, 2882
BstKTI GATC 7 cut(s) 96, 601, 817, 961, 1144, 2138, 2313
BstMAI GTCTC 7 cut(s) 52, 80, 512, 955, 1089, 2047, 2499
BstMBI GATC 7 cut(s) 93, 598, 814, 958, 1141, 2135, 2310
BstMCI CGRYCG 1 cut(s) 1356
BstMWI GCNNNNNNNGC 7 cut(s) 267, 714, 1603, 1871, 1880, 2012, 2585
BstNSI RCATGY 3 cut(s) 91, 270, 2459
BstPI GGTNACC 1 cut(s) 2858
BstSCI CCNGG 4 cut(s) 508, 846, 1135, 2678
BstSLI GKGCMC 1 cut(s) 2209
BstUI CGCG 1 cut(s) 1469
BstV1I GCAGC 4 cut(s) 1077, 1521, 1999, 2177
BstV2I GAAGAC 4 cut(s) 929, 1641, 2528, 2924
BstXI CCANNNNNNTGG 3 cut(s) 692, 1841, 2256
BstZI CGGCCG 1 cut(s) 1353
BsuRI GGCC 8 cut(s) 411, 717, 840, 1311, 1355, 1671, 1701, 1895
BtgI CCRYGG 3 cut(s) 1781, 2079, 2865
BtrI CACGTC 2 cut(s) 295, 373
BtsCI GGATG 6 cut(s) 31, 142, 347, 1245, 1632, 2346
BtsIMutI CAGTG 4 cut(s) 16, 1164, 2625, 2845
BtuMI TCGCGA 1 cut(s) 1469
BveI ACCTGC 1 cut(s) 1449
Cac8I GCNNGC 1 cut(s) 1885
CfoI GCGC 2 cut(s) 2711, 2882
Cfr10I RCCGGY 2 cut(s) 836, 1332
Cfr13I GGNCC 6 cut(s) 911, 1438, 1628, 1669, 1700, 2772
CseI GACGC 2 cut(s) 158, 2525
Csp6I GTAC 3 cut(s) 664, 1205, 2850
CspCI CAANNNNNGTGG 2 cut(s) 2339, 2374
CviQI GTAC 3 cut(s) 664, 1205, 2850
DpnI GATC 7 cut(s) 95, 600, 816, 960, 1143, 2137, 2312
DpnII GATC 7 cut(s) 93, 598, 814, 958, 1141, 2135, 2310
DraIII CACNNNGTG 1 cut(s) 1977
EaeI YGGCCR 4 cut(s) 409, 838, 1353, 1893
EagI CGGCCG 1 cut(s) 1353
Eam1104I CTCTTC 2 cut(s) 50, 890
EarI CTCTTC 2 cut(s) 50, 890
Ecl136II GAGCTC 3 cut(s) 874, 1519, 2441
EclXI CGGCCG 1 cut(s) 1353
Eco130I CCWWGG 2 cut(s) 1789, 2568
Eco24I GRGCYC 5 cut(s) 876, 1521, 2124, 2443, 2737
Eco31I GGTCTC 1 cut(s) 52
Eco32I GATATC 3 cut(s) 881, 1350, 2641
Eco47I GGWCC 4 cut(s) 911, 1438, 1628, 2772
Eco52I CGGCCG 1 cut(s) 1353
Eco53kI GAGCTC 3 cut(s) 874, 1519, 2441
Eco57I CTGAAG 4 cut(s) 65, 174, 1085, 2522
Eco72I CACGTG 2 cut(s) 1974, 2797
Eco88I CYCGRG 5 cut(s) 580, 1225, 1396, 1520, 2498
Eco91I GGTNACC 1 cut(s) 2858
EcoICRI GAGCTC 3 cut(s) 874, 1519, 2441
EcoO109I RGGNCCY 1 cut(s) 1438
EcoO65I GGTNACC 1 cut(s) 2858
EcoRI GAATTC 2 cut(s) 970, 2236
EcoRV GATATC 3 cut(s) 881, 1350, 2641
EcoT14I CCWWGG 2 cut(s) 1789, 2568
EcoT22I ATGCAT 3 cut(s) 272, 2048, 2341
EcoT38I GRGCYC 5 cut(s) 876, 1521, 2124, 2443, 2737
ErhI CCWWGG 2 cut(s) 1789, 2568
Esp3I CGTCTC 1 cut(s) 2047
FalI AAGNNNNNCTT 4 cut(s) 147, 179, 1276, 1308
FaqI GGGAC 3 cut(s) 352, 1451, 1614
FauI CCCGC 1 cut(s) 613
FauNDI CATATG 1 cut(s) 2341
FbaI TGATCA 1 cut(s) 93
FblI GTMKAC 1 cut(s) 1173
Fnu4HI GCNGC 7 cut(s) 1091, 1510, 1684, 1699, 1915, 2013, 2166
FokI GGATG 6 cut(s) 38, 149, 334, 1232, 1619, 2333
FriOI GRGCYC 5 cut(s) 876, 1521, 2124, 2443, 2737
Fsp4HI GCNGC 7 cut(s) 1091, 1510, 1684, 1699, 1915, 2013, 2166
GlaI GCGC 2 cut(s) 2710, 2881
GluI GCNGC 7 cut(s) 1091, 1510, 1684, 1699, 1915, 2013, 2166
GsaI CCCAGC 1 cut(s) 2404
GsuI CTGGAG 3 cut(s) 241, 536, 2583
HaeIII GGCC 8 cut(s) 411, 717, 840, 1311, 1355, 1671, 1701, 1895
HgaI GACGC 2 cut(s) 158, 2525
HhaI GCGC 2 cut(s) 2711, 2882
Hin6I GCGC 2 cut(s) 2709, 2880
HinP1I GCGC 2 cut(s) 2709, 2880
HincII GTYRAC 4 cut(s) 283, 298, 304, 2515
HindII GTYRAC 4 cut(s) 283, 298, 304, 2515
HindIII AAGCTT 5 cut(s) 180, 791, 944, 1367, 1604
HpaI GTTAAC 1 cut(s) 283
Hpy99I CGWCG 5 cut(s) 197, 292, 377, 2415, 2696
HpyAV CCTTC 9 cut(s) 184, 210, 1109, 1262, 1455, 1847, 2294, 2357, 2852
HpyCH4III ACNGT 4 cut(s) 1168, 2080, 2448, 2849
HpyCH4IV ACGT 8 cut(s) 21, 294, 300, 306, 372, 1973, 2592, 2796
HpyF10VI GCNNNNNNNGC 7 cut(s) 267, 714, 1603, 1871, 1880, 2012, 2585
HpySE526I ACGT 8 cut(s) 21, 294, 300, 306, 372, 1973, 2592, 2796
HspAI GCGC 2 cut(s) 2709, 2880
Kpn2I TCCGGA 2 cut(s) 320, 1412
Ksp22I TGATCA 1 cut(s) 93
KspAI GTTAAC 1 cut(s) 283
Kzo9I GATC 7 cut(s) 93, 598, 814, 958, 1141, 2135, 2310
LmnI GCTCC 5 cut(s) 222, 879, 1588, 1862, 2068
Lsp1109I GCAGC 4 cut(s) 1077, 1521, 1999, 2177
LweI GCATC 6 cut(s) 279, 1584, 1716, 2218, 2730, 2755
MaeII ACGT 8 cut(s) 21, 294, 300, 306, 372, 1973, 2592, 2796
MaeIII GTNAC 4 cut(s) 262, 422, 533, 2858
MalI GATC 7 cut(s) 95, 600, 816, 960, 1143, 2137, 2312
MboI GATC 7 cut(s) 93, 598, 814, 958, 1141, 2135, 2310
MfeI CAATTG 3 cut(s) 1643, 2145, 2190
MhlI GDGCHC 6 cut(s) 876, 1521, 2124, 2209, 2443, 2737
MlsI TGGCCA 1 cut(s) 411
MluNI TGGCCA 1 cut(s) 411
MlyI GAGTC 3 cut(s) 845, 1508, 2900
MmeI TCCRAC 2 cut(s) 417, 475
Mox20I TGGCCA 1 cut(s) 411
Mph1103I ATGCAT 3 cut(s) 272, 2048, 2341
MroI TCCGGA 2 cut(s) 320, 1412
MroXI GAANNNNTTC 2 cut(s) 1118, 1235
MscI TGGCCA 1 cut(s) 411
MseI TTAA 5 cut(s) 107, 282, 587, 731, 1601
MslI CAYNNNNRTG 3 cut(s) 126, 1839, 2763
Msp20I TGGCCA 1 cut(s) 411
MspA1I CMGCKG 2 cut(s) 1105, 1698
MspR9I CCNGG 4 cut(s) 510, 848, 1137, 2680
MunI CAATTG 3 cut(s) 1643, 2145, 2190
Mva1269I GAATGC 2 cut(s) 2046, 2341
MvnI CGCG 1 cut(s) 1469
MwoI GCNNNNNNNGC 7 cut(s) 267, 714, 1603, 1871, 1880, 2012, 2585
NciI CCSGG 4 cut(s) 510, 848, 1137, 2680
NdeI CATATG 1 cut(s) 2341
NdeII GATC 7 cut(s) 93, 598, 814, 958, 1141, 2135, 2310
NheI GCTAGC 1 cut(s) 1883
NlaIV GGNNCC 6 cut(s) 1232, 1439, 1630, 1787, 1864, 2291
NmeAIII GCCGAG 2 cut(s) 1066, 1337
NmuCI GTSAC 2 cut(s) 422, 2858
NruI TCGCGA 1 cut(s) 1469
NsiI ATGCAT 3 cut(s) 272, 2048, 2341
NspI RCATGY 3 cut(s) 91, 270, 2459
PaeR7I CTCGAG 2 cut(s) 580, 1520
PcsI WCGNNNNNNNCGW 3 cut(s) 381, 2358, 2721
PctI GAATGC 2 cut(s) 2046, 2341
PdmI GAANNNNTTC 2 cut(s) 1118, 1235
PfeI GAWTC 9 cut(s) 805, 988, 1024, 1060, 1132, 1802, 2564, 2785, 2806
PflMI CCANNNNNTGG 1 cut(s) 1977
PfoI TCCNGGA 1 cut(s) 846
PkrI GCNGC 7 cut(s) 1092, 1511, 1685, 1700, 1916, 2014, 2167
PleI GAGTC 3 cut(s) 845, 1507, 2900
PmaCI CACGTG 2 cut(s) 1974, 2797
PmlI CACGTG 2 cut(s) 1974, 2797
PpsI GAGTC 3 cut(s) 845, 1507, 2900
Ppu21I YACGTR 3 cut(s) 22, 1974, 2797
PpuMI RGGWCCY 1 cut(s) 1438
PsiI TTATAA 1 cut(s) 32
Psp124BI GAGCTC 3 cut(s) 876, 1521, 2443
Psp5II RGGWCCY 1 cut(s) 1438
PspCI CACGTG 2 cut(s) 1974, 2797
PspEI GGTNACC 1 cut(s) 2858
PspFI CCCAGC 1 cut(s) 2400
PspN4I GGNNCC 6 cut(s) 1232, 1439, 1630, 1787, 1864, 2291
PspPI GGNCC 6 cut(s) 911, 1438, 1628, 1669, 1700, 2772
PspPPI RGGWCCY 1 cut(s) 1438
PvuII CAGCTG 1 cut(s) 1105
RruI TCGCGA 1 cut(s) 1469
RsaI GTAC 3 cut(s) 665, 1206, 2851
RsaNI GTAC 3 cut(s) 664, 1205, 2850
RseI CAYNNNNRTG 3 cut(s) 126, 1839, 2763
SacI GAGCTC 3 cut(s) 876, 1521, 2443
SaqAI TTAA 5 cut(s) 107, 282, 587, 731, 1601
SatI GCNGC 7 cut(s) 1091, 1510, 1684, 1699, 1915, 2013, 2166
Sau3AI GATC 7 cut(s) 93, 598, 814, 958, 1141, 2135, 2310
Sau96I GGNCC 6 cut(s) 911, 1438, 1628, 1669, 1700, 2772
ScaI AGTACT 1 cut(s) 665
SchI GAGTC 3 cut(s) 845, 1508, 2900
ScrFI CCNGG 4 cut(s) 510, 848, 1137, 2680
SduI GDGCHC 6 cut(s) 876, 1521, 2124, 2209, 2443, 2737
SfaNI GCATC 6 cut(s) 279, 1584, 1716, 2218, 2730, 2755
Sfr274I CTCGAG 2 cut(s) 580, 1520
SinI GGWCC 4 cut(s) 911, 1438, 1628, 2772
SlaI CTCGAG 2 cut(s) 580, 1520
SmiMI CAYNNNNRTG 3 cut(s) 126, 1839, 2763
SmlI CTYRAG 4 cut(s) 214, 580, 1019, 1520
SmoI CTYRAG 4 cut(s) 214, 580, 1019, 1520
SpeI ACTAGT 1 cut(s) 71
SsiI CCGC 8 cut(s) 234, 620, 914, 1373, 1684, 1698, 1914, 2389
SspI AATATT 2 cut(s) 1822, 2357
SstI GAGCTC 3 cut(s) 876, 1521, 2443
StyD4I CCNGG 4 cut(s) 508, 846, 1135, 2678
StyI CCWWGG 2 cut(s) 1789, 2568
TaaI ACNGT 4 cut(s) 1168, 2080, 2448, 2849
TaiI ACGT 8 cut(s) 24, 297, 303, 309, 375, 1976, 2595, 2799
TaqII GACCGA 2 cut(s) 1727, 2789
TatI WGTACW 2 cut(s) 663, 2849
TauI GCSGC 3 cut(s) 1686, 1701, 1917
TfiI GAWTC 9 cut(s) 805, 988, 1024, 1060, 1132, 1802, 2564, 2785, 2806
Tru1I TTAA 5 cut(s) 107, 282, 587, 731, 1601
Tru9I TTAA 5 cut(s) 107, 282, 587, 731, 1601
TscAI CASTG 4 cut(s) 16, 1171, 2632, 2852
TseFI GTSAC 2 cut(s) 422, 2858
TseI GCWGC 4 cut(s) 1090, 1509, 2012, 2165
Tsp45I GTSAC 2 cut(s) 422, 2858
TspDTI ATGAA 7 cut(s) 1019, 1641, 1829, 2103, 2829, 2846, 2901
TspGWI ACGGA 3 cut(s) 909, 1798, 2428
TspRI CASTG 4 cut(s) 16, 1171, 2632, 2852
Van91I CCANNNNNTGG 1 cut(s) 1977
VneI GTGCAC 1 cut(s) 2205
VpaK11BI GGWCC 4 cut(s) 911, 1438, 1628, 2772
XceI RCATGY 3 cut(s) 91, 270, 2459
XhoI CTCGAG 2 cut(s) 580, 1520
XmaJI CCTAGG 1 cut(s) 1789
XmiI GTMKAC 1 cut(s) 1173
XmnI GAANNNNTTC 2 cut(s) 1118, 1235
ZrmI AGTACT 1 cut(s) 665
Zsp2I ATGCAT 3 cut(s) 272, 2048, 2341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.